Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 882,856 C→A R178L (CGT→CTT)  ybjG ← undecaprenyl pyrophosphate phosphatase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_000913882,8560CA99.1% 391.6 / ‑3.7 108R178L (CGT→CTT) ybjGundecaprenyl pyrophosphate phosphatase
Reads supporting (aligned to +/- strand):  ref base C (0/1);  new base A (47/60);  total (47/61)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.71e-01

Only 100 of 108 total aligned reads displayed.

GAGCCGCTCAATACTACACTTTTTAGCAGAGATCAGTCACGCACCCAGCCTTTGCGGATCGGTAATGCAAAACAGACGCGATACCACGATTGCAGACGTTGATAGAGTTTATGCCCCATCGCTTGCCAGATAATCTGGGCACTAAGGCAGCCAATCATACCTGCCAGCAATCCACCGAGCATATCCAGCGGC  >  NC_000913/882760‑882951
                                                                                                |                                                                                               
gAGCCGCTCAATACTACACTTTTTAGCAGAGATCAGTCACGCACCCAGCCTTTGCGGATCGGTAATGCAAAACAGACGCGATACCACGATTGCAGAAGtt                                                                                              >  2:2240283/1‑100 (MQ=255)
gAGCCGCTCAATACTACACTTTTTAGCAGAGATCAGTCACGCACCCAGCCTTTGCGGATCGGTAATGCAAAACAGACGCGATACCACGATTGCAGAAGtt                                                                                              >  2:231548/1‑100 (MQ=255)
 aGCCGCTCAATACTACACTTTTTAGCAGAGATCAGTCACGCACCCAGCCTTTGCGGATCGGTAATGCAAAACAGACGCGATACCACGATTGCAGAAGTTg                                                                                             <  2:1626544/100‑1 (MQ=255)
 aGCCGCTCAATACTACACTTTTTAGCAGAGATCAGTCACGCACCCAGCCTTTGCGGATCGGTAATGCAAAACAGACGCGATACCACGATTGCAGAAGTTg                                                                                             >  2:1898363/1‑100 (MQ=255)
  gCCGCTCAATACTACACTTTTTAGCAGAGATCAGTCACGCACCCAGCCTTTGCGGATCGGTAATGCAAAACAGACGCGATACCACGATTGCAGAAGTTGa                                                                                            <  2:2222241/100‑1 (MQ=255)
   cttccgatctctacACTTTTTAGCAGAGATCAGTCACGCACCCAGCCTTTGCGGATCGGTAATGCAAAACAGACGCGATACCACGATTGCAGAAGTTGAt                                                                                           <  2:1594277/90‑1 (MQ=255)
   ccGCTCAATACTACACTTTTTAGCAGAGATCAGTCACGCACCCAGCCTTTGCGGATCGGTAATGCAAAACAGACGCGATACCACGATTGCAGAAGTTGAt                                                                                           <  1:779888/100‑1 (MQ=255)
     gcccAATACTACACTTTTTAGCAGAGATCAGTCACGCACCCAGCCTTTGCGGATCGGTAATGCAAAACAGACGCGATACCACGATTGCAGAAGTTGATag                                                                                         <  2:693050/97‑1 (MQ=255)
        cAATACTACACTTTTTAGCAGAGATCAGTCACGCACCCAGCCTTTGCGGATCGGTAATGCAAAACAGACGCGATACCACGATTGCAGAAGTTGATAGAGt                                                                                      >  2:1668348/1‑100 (MQ=255)
        cAATACTACACTTTTTAGCAGAGATCAGTCACGCACCCAGCCTTTGCGGATCGGTAATGCAAAACAGACGCGATACCACGATTGCAGAAGTTGATAGAGt                                                                                      <  1:1387641/100‑1 (MQ=255)
         aaTACTACACTTTTTAGCAGAGATCAGTCACGCACCCAGCCTTTGCGGATCGGTAATGCAAAACAGACGCGATACCACGATTGCAGAAGTTGATAGAGtt                                                                                     <  1:827828/100‑1 (MQ=255)
          gatctacACTTTTTAGCAGAGATCAGTCACGCACCCAGCCTTTGCGGATCGGTAATGCAAAACAGACGCGATACCACGATTGCAGAAGTTGATAGAGttt                                                                                    <  1:864171/97‑1 (MQ=255)
          aTACTACACTTTTTAGCAGAGATCAGTCACGCACCCAGCCTTTGCGGATCGGTAATGCAAAACAGACGCGATACCACGATTGCAGAAGTTGATAGAGttt                                                                                    >  1:1712879/1‑100 (MQ=255)
           tactacACTTTTTAGCAGAGATCAGTCACGCACCCAGCCTTTGCGGATCGGTAATGCAAAACAGACGCGATACCACGATTGCAGAAGTTGATAGAGTTTa                                                                                   >  2:780527/1‑100 (MQ=255)
            actacACTTTTTAGCAGAGATCAGTCACGCACCCAGCCTTTGCGGATCGGTAATGCAAAACAGACGCGATACCACGATTGCAGAAGTTGATAGAGTTTAt                                                                                  >  2:2228113/1‑100 (MQ=255)
             ctacACTTTTTAGCAGAGATCAGTCACGCACCCAGCCTTTGCGGATCGGTAATGCAAAACAGACGCGATACCACGATTGCAGAAGTTGATAGAGTTTATg                                                                                 >  1:321957/1‑100 (MQ=255)
             ctacACTTTTTAGCAGAGATCAGTCACGCACCCAGCCTTTGCGGATCGGTAATGCAAAACAGACGCGATACCACGATTGCAGAAGTTGATAGAGTTTATg                                                                                 <  1:2317906/100‑1 (MQ=255)
             ctacACTTTTTAGCAGAGATCAGTCACGCACCCAGCCTTTGCGCATCGGTAATGCAAAACAGACGCGATACCACGATTGCAGAAGTTGATAGAGTTTATg                                                                                 <  2:1499227/100‑1 (MQ=255)
               acacTTTTTAGCAGAGATCAGTCACGCACCCAGCCTTTGCGGATCGGTAATGCAAATCAGACGCGATACCACGATTGCAGAAGTTGATAGAGTTTATGcc                                                                               >  2:1498756/1‑100 (MQ=255)
               acacTTTTTAGCAGAGATCAGTCACGCACCCAGCCTTTGCGGATCGGTAATGCAAAACAGACGCGATACCACGATTGCAGAAGTTGATAGAGTTTagatc                                                                               >  2:864169/1‑96 (MQ=255)
                cacTTTTTAGCAGAGATCAGTCACGCACCCAGCCTTTGCGGATCGGTAATGCAAAACAGACGCGATACCACGATTGCAGAAGTTGATAGAGTTTATGccc                                                                              >  2:1993613/1‑100 (MQ=255)
                 acTTTTTAGCAGAGATCAGTCACGCACCCAGCCTTTGCGGATCGGTAATGCAAAACAGACGCGATACCACGATTGCAGAAGTTGATAGAGTTTATGcccc                                                                             >  1:1921150/1‑100 (MQ=255)
                  cTTTTTAGCAGAGATCAGTCACGCACCCAGCCTTTGCGGATCGGTAATGCAAAACAGACGCGATACCACGATTGCAGAAGTTGATAGAGTTTATGCCCCa                                                                            >  1:297693/1‑100 (MQ=255)
                  cTTTTTAGCAGAGATCAGTCACGCACCCAGCCTTTGCGGATCGGTAATGCAAAACAGACGCGATACCACGATTGCAGAAGTTGATAGAGTTTATGCCCCa                                                                            >  2:80852/1‑100 (MQ=255)
                    ttttAGCAGAGATCAGTCACGCACCCAGCCTTTGCGGATCGGTAATGCAAAACAGACGCGATACCACGATTGCAGAAGTTGATAGAGTTTATGCCCCATc                                                                          <  1:1518259/100‑1 (MQ=255)
                        aGCAGAGATCAGTCACGCACCCAGCCTTTGCGGATCGGTAATGCAAAACAGACGCGATACCACGATTGCAGAAGTTGATAGAGTTTATGCCCCATCGCtt                                                                      >  1:113269/1‑100 (MQ=255)
                         gCAGAGATCAGTCACGCACCCAGCCTTTGCGGATCGGTAATGCAAAACAGACGCGATACCACGATTGCAGAAGTTGATAGAGTTTATGCCCCATCGCTTg                                                                     <  2:424888/100‑1 (MQ=255)
                         gCAGAGATCAGTCACGCACCCAGCCTTTGCGGATCGGTAATGCAAAACAGACGCGATACCACGATTGCAGAAGTTGATAGAGTTTATGCCCCATCGCTTg                                                                     <  2:113267/100‑1 (MQ=255)
                          cAGAGATCAGTCACGCACCCAGCCTTTGCGGATCGGTAATGCAAAACAGACGCGATACCACGATTGCAGAAGTTGATAGAGTTTATGCCCCATCGCTTGc                                                                    >  2:1825857/1‑100 (MQ=255)
                          cAGAGATCAGTCACGCACCCAGCCTTTGCGGATCGGTAATGCAAAACAGACGCGATACCACGATTGCAGAAGTTGATAGAGTTTATGCCCCATCGCTTGc                                                                    >  1:1486122/1‑100 (MQ=255)
                           agagATCAGTCACGCACCCAGCCTTTGCGGATCGGTAATGCAAAACAGACGCGATACCACGATTGCAGAAGTTGATAGAGTTTATGCCCCATCGCTTGcc                                                                   <  1:1622081/100‑1 (MQ=255)
                           agagATCAGTCACGCACCCAGCCTTTGCGGATCGGTAATGCAAAACAGACGCGATACCACGATTGCAGAAGTTGATAGAGTTTATGCCCCATCGCTTGcc                                                                   >  2:130479/1‑100 (MQ=255)
                           agagATCAGTCACGCACCCAGCCTTTGCGGATCGGTAATGCAAAACAGACGCGATACCACGATTGCAGAAGTTGATAGAGTTTATGCCCCATCGCTTGcc                                                                   <  1:1498760/100‑1 (MQ=255)
                            nagaTCAGTCACGCACCCAGCCTTTGCGGATCGGTAATGCAAAACAGACGCGATACCACGATTGCAGAAGTTGATAGAGTTTATGCCCCATCGCTTGCCa                                                                  >  1:384091/2‑100 (MQ=255)
                             agaTCAGTCACGCACCCAGCCTTTGCGGATCGGTAATGCAAAACAGACGCGATACCACGATTGCAGACGTTGATAGAGTTTATGCCCCATCGCTTGCCAg                                                                 <  1:1610763/100‑1 (MQ=255)
                             agaTCAGTCACGCACCCAGCCTTTGCGGATCGGTAATGCAAAACAGACGCGATACCACGATTGCAGAAGTTGATAGAGTTTATGCCCCATCGCTTGCCAg                                                                 <  2:226482/100‑1 (MQ=255)
                             agaTCAGTCACGCACCCAGCCTTTGCGGATCGGTAATGCAAAACAGACGCGATACCACGATTGCAGAAGTTGATAGAGTTTATGCCCCATCGCTTGCCAg                                                                 <  2:1436965/100‑1 (MQ=255)
                              gaTCAGTCACGCACCCAGCCTTTGCGGATCGGTAATGCAAAACAGACGCGATACCACGATTGCAGAAGTTGATAGAGTTTATGCCCCATCGCTTGCCAGa                                                                <  2:364437/100‑1 (MQ=255)
                               aTCAGTCACGCACCCAGCCTTTGCGGATCGGTAATGCAAAACAGACGCGATACCACGATTGCAGAAGTTGATAGAGTTTATGCCCCATCGCTTGCCAGAt                                                               <  2:1673131/100‑1 (MQ=255)
                               aTCAGTCACGCACCCAGCCTTTGCGGATCGGTAATGCAAAACAGACGCGATACCACGATTGCAGAAGTTGATAGAGTTTATGCCCCATCGCTTGCCAGAt                                                               <  2:1873105/100‑1 (MQ=255)
                                tCAGTCACGCACCCAGCCTTTGCGGATCGGTAATGCAAAACAGACGCGATACCACGATTGCAGAAGTTGATAGAGTTTATGCCCCATCGCTTGCCAGATa                                                              <  1:439833/100‑1 (MQ=255)
                                tCAGTCACGCACCCAGCCTTTGCGGATCGGTAATGCAAAACAGACGCGATACCACGATTGCAGAAGTTGATAGAGTTTATGCCCCATCGCTTGCCAGATa                                                              >  2:2095240/1‑100 (MQ=255)
                                 cAGTCACGCACCCAGCCTTTGCGGATCGGTGATCCAAAACAGACGCGATACCACGATTGCAGAAGTTGATAGAGTTTATGCCCCATCGCATGCCAGATaa                                                             >  2:1538852/1‑100 (MQ=255)
                                   gTCACGCACCCAGCCTTTGCGGATCGGTAATGCAAAACAGACGCGATACCACGATTGCAGAAGTTGATAGAGTTTATGCCCCATCGCTTGCCAGATAATc                                                           >  1:845131/1‑100 (MQ=255)
                                    tCACGCACCCAGCCTTTGCGGATCGGTAATGCAAAACAGACGCGATACCACGATTGCAGAAGTTGATAGAGTTTATGCCCCATCGCTTGCCAGATAATCt                                                          <  1:780528/100‑1 (MQ=255)
                                    tCACGCACCCAGCCTTTGCGGATCGGTAATGCAAAACAGACGCGATACCACGATTGCAGAAGTTGATAGAGTTTATGCCCCATCGCTTGCCAGATAATCt                                                          <  2:1703726/100‑1 (MQ=255)
                                       cGCACCCAGCCTTTGCGGATCGGTAATGCAAAACAGACGCGATACCACGATTGCAGAAGTTTACACAGTTTATGCCCCATCGCTTGCCAGATAATCTgg                                                        >  2:1004796/1‑99 (MQ=255)
                                        gCACCCAGCCTTTGCGGATCGGTAATGCAAAACAGACGCGATACCACGATTGCAGAAGTTGATAGAGTTTATGCCCCATCGCTTGCCAGATAATCTGGGc                                                      <  1:674471/100‑1 (MQ=255)
                                        gCACCCAGCCTTTGCGGATCGGTAATGCAAAACAGACGCGATACCACGATTGCAGAAGTTGATAGAGTTTATGCCCCATCGCTTGCCAGATAATCTGGGc                                                      <  2:1347508/100‑1 (MQ=255)
                                        gCACCCAGCCTTTGCGGATCGGTAATGCAAAACAGACGCGATACCACGATTGCAGAAGTTGATAGAGTTTATGCCCCATCGCTTGCCAGATAATCTGGGc                                                      <  1:1680072/100‑1 (MQ=255)
                                            ccAGCCTTTGCGGATCGGTAATGCAAAACAGACGCGATACCACGATTGCAGAAGTTGATAGAGTTTATGCCCCATCGCTTGCCAGATAATCTGGGCACTa                                                  >  2:883669/1‑100 (MQ=255)
                                            ccAGCCTTTGCGGATCGGTAATGCAAAACAGACGCGATACCACGATTGCAGAAGTTGATAGAGTTTATGCCCCATCGCTTGCCAGATAATCTGGGCACTa                                                  <  1:1255045/100‑1 (MQ=255)
                                             cAGCCTTTGCGGATCGGTAATGCAAAACAGACGCGATACCACGATTGCAGAAGTTGATAGAGTTTATGCCCCATCGCTTGCCAGATAATCTGGGCACTaa                                                 <  1:701105/100‑1 (MQ=255)
                                              aGCCTTTGCGGATCGGTAATGCAAAACAGACGCGATACCACGATTGCAGAAGTTGATAGAGTTTATGCCCCATCGCTTGCCAGATAATCTGGGCACTAAg                                                <  1:2095247/100‑1 (MQ=255)
                                               gCCTTTGCGGATCGGTAATGCAAAACAGACGCGATACCACGATTGCAGAAGTTGATAGAGTTTATGCCCCATCGCTTGCCAGATAATCTGGGCACTAAgg                                               <  2:2339546/100‑1 (MQ=255)
                                                   ttGCGGATCGGTAATGCAAAACAGACGCGATACCACGATTGCAGAAGTTGATAGAGTTTATGCCCCATCGCTTGCCAGATAATCTGGGCACTAAGGCAGc                                           <  1:812989/100‑1 (MQ=255)
                                                    ttccgATCTGCAATGCAAAACAGACGCGATACCACGATTGCAGAAGTTGATAGAGTTTATGCCCCATCGCTTGCCAGATAATCTGGGCACTAAGGCAGcc                                          <  2:1529585/96‑1 (MQ=255)
                                                    tGCGGATCGGTGATGCAAAACAGACGCTATACCACGATTGCAGAAGTTGATAGAGTTTATGCCCCATCGCTTGCCAGATAATCTGGGCACTAAGGCAGcc                                          <  2:213992/100‑1 (MQ=255)
                                                      cGGATCGGTAATGCAAAACAGACGCGATACCACGATTGCAGAAGTTGATAGAGTTTATGCCCAATCGCTTGCCAGATAATCTGGGCACTAAGGCAGCCaa                                        >  2:811635/1‑100 (MQ=255)
                                                       ggATCGGTAATGCAAAACAGACGCGATACCACGATTGCAGAAGTTGATAGAGTTTATGCCCCATCGCTTGCCAGATAATCTGGGCACTAAGGCAGCCaa                                        >  1:1599345/1‑99 (MQ=255)
                                                          ctggTAATGCAAAACAGACGCGATACCACGATTGCAGAAGTTGATAGAGTTTATGCCCCATCGCTTGCCAGATAATCTGGGCACTAAGGCAGCCAATCAt                                    <  2:892463/98‑1 (MQ=255)
                                                           cGGTAATGCAAAACAGACGCGATACCACGATTGCAGAAGTTGATAGAGTTTATGCCCCATCGCTTGCCAGATAATCTGGGCACTAAGGCAGCCAATCATa                                   <  1:829516/100‑1 (MQ=255)
                                                           cGGTAATGCAAAACAGACGCGATACCACGATTGCAGAAGTTGATAGAGTTTATGCCCCATCGCTTGCCAGATAATCTGGGCACTAAGGCAGCCAATCATa                                   <  1:2004117/100‑1 (MQ=255)
                                                           cGGTAATGCAAAACAGACGCGATACCACGATTGCAGAAGTTGATAGAGTTTATGCCCCATCGCTTGCCAGATAATCTGGGCACTAAGGCAGCCAATCATa                                   <  2:1486118/100‑1 (MQ=255)
                                                            ggTAATGCAAAACAGACGCGATACCACGATTGCAGAAGTTGATAGAGTTTATGCCCCATCGCTTGCCAGATAATCTGGGCACTAAGGCAGCCAATCATAc                                  >  2:672675/1‑100 (MQ=255)
                                                            ggTAATGCAAAACAGACGCGATACCACGATTGCAGAAGTTGATAGAGTTTATGCCCCATCGCTTGCCAGATAATCTGGGCACTAAGGCAGCCAATCATAc                                  >  1:1791253/1‑100 (MQ=255)
                                                            ggTAATGCAAAACAGACGCGATACCACGATTGCAGAAGTTGATAGAGTTTATGCCCCATCGCTTGCCAGATAATCTGGGCACTAAGGCAGCCAATCATAc                                  >  2:738164/1‑100 (MQ=255)
                                                             gTAATGCAAAACAGACGCGATACCACGATTGCAGAAGTTGATAGAGTTTATGCCCCATCGCTTGCCAGATAATCTGGGCACTAAGGCAGCCagatcggaa                                 >  1:1529589/1‑92 (MQ=255)
                                                             gTAATGCAAAACAGACGCGATACCACGATTGCAGAAGTTGATAGAGTTTATGCCCCATCGCTTGCCAGATAATCTGGGCACTAAGGCAGCCAATCATAcc                                 >  1:1359654/1‑100 (MQ=255)
                                                             gTAATGCAAAACAGACGCGATACCACGATTGCAGAAGTTGATAGAGTTTATGCCCCATCGCTTGCCAGATAATCTGGGCACTAAGGCAGCCAATCATAcc                                 >  1:1333082/1‑100 (MQ=255)
                                                             gTAATGCAAAACAGACGCGATACCACGATTGCAGAAGTTGATAGAGTTTATGCCCCATCGCTTGCCAGATAATCTGGGCACTAAGGCAGCCAATCATAcc                                 <  2:2147781/100‑1 (MQ=255)
                                                             gTAATGCAAAACAGACGCGATACCACGATTGCAGAAGTTGATAGAGTTTATGCCCCATCGCTTGCCAGATAATCTGGGCACTAAGGCAGCCAATCATAcc                                 <  1:861090/100‑1 (MQ=255)
                                                             gTAATGCAAAACAGACGCGATACCACGATTGCAGAAGTTGATAGAGTTTATGCCCCATCGCTTGCCAGATAATCTGGGCACTAAGGCAGCCAATCATAcc                                 <  1:231550/100‑1 (MQ=255)
                                                               aaTGCAAAACAGACGCGATACCACGATTGCAGAAGTTGATAGAGTTTATGCCCCATCGCTTGCCAGATAATCTGGGCACTAAGGCAGGCAATCATACCTg                               <  1:1538856/100‑1 (MQ=255)
                                                                aTGCAAAACAGACGCGATACCACGATTGCAGAAGTTGATAGAGTTTATGCCCCATCGCTTGCCAGATAATCTGGGCACTAAGGCAGCCAATCATACCTGc                              >  2:420545/1‑100 (MQ=255)
                                                                 tGCAAAACAGACGCGATACCACGATTGCAGAAGTTGATAGAGTTTATGCCCCATCGCTTGCCAGATAATCTGGGCACTAAGGCAGCCAATCATACCTGcc                             >  2:618107/1‑100 (MQ=255)
                                                                 tGCAAAACAGACGCGATACCACGATTGCAGAAGTTGATAGAGTTTATGCCCCATCGCTTGCCAGATAATCTGGGCACTAAGGCAGCCAATCATACCTGcc                             >  1:270928/1‑100 (MQ=255)
                                                                  acAAAACAGACGCGATACCACGATTGCAGAAGTTGATAGAGTTTATGCCCCATCGCTTGCCAGATAATCTGGGCACTAAGGCAGCCAATCATACCTGCCa                            >  1:1091210/2‑100 (MQ=255)
                                                                   cAAAACAGACGCGATACCACGATTGCAGAAGTTGATAGAGTTTATGCCCCATCGCTTGCCAGATAATCTGGGCACTAAGGCAGCCAATCATACCTGCCAg                           <  2:1599340/100‑1 (MQ=255)
                                                                     aaaCAGACGCGATACCACGATTGCAGAAGTTGATAGAGTTTATGCCCCATCGCTTGCCAGATAATCTGGGCACTAAGGCAGCCAATCATACCTGCCAGCa                         <  1:2156620/100‑1 (MQ=255)
                                                                       aCAGACGCGATACCACGATTGCAGAAGTTGATAGAGTTTATGCCCCATCGCTTGCCAGATAATCTGGGCACTAAGGCAGCCAATCATACCTGCCAGCAAt                       <  1:1935098/100‑1 (MQ=255)
                                                                       aCAGACGCGATACCACGATTGCAGAAGTTGATAGAGTTTATGCCCCATCGCTTGCCAGATAATCTGGGCACTAAGGCAGCCAATCATACCTGCCAGCAAt                       <  1:1993620/100‑1 (MQ=255)
                                                                            cgcgATACCACGATTGCAGAAGTTGATAGAGTTTATGCCCCATCGCTTGCCAGATAATCTGGGCACTAAGGCAGCCAATCATACCTGCCAGCAATCCAcc                  >  2:221308/1‑100 (MQ=255)
                                                                            cgcgATACCACGATTGCAGAAGTTGATAGAGTTTATGCCCCATCGCTTGCCAGATAATCTGGGCACTAAGGCAGCCAATCATACCTGCCAGCAATCCAcc                  <  1:1825862/100‑1 (MQ=255)
                                                                             gcgATACCACGATTGCAGAAGTTGATAGAGTTTATGCCCCATCGCTTGCCAGATAATCTGGGCACTAAGGCAGCCAATCATACCTGCCAGCAATCCACCg                 <  2:1273865/100‑1 (MQ=255)
                                                                              cgATACCACGATTGCAGAAGTTGATAGAGTTTATGCCCCATCGCTTGCCAGATAATCTGGGCACTAAGGCAGCCAATCATACCTGCCAGCAATCCACCg                 <  2:321955/99‑1 (MQ=255)
                                                                              cgATACCACGATTGCAGAAGTTGATAGAGTTTATGCCCCATCGCTTGCCAGATAATCTGGGCACTAAGGCAGCCAATCATACCTGCCAGCAATCCACCGa                >  1:2330952/1‑100 (MQ=255)
                                                                              cgATACCACGATTGCAGAAGTTGATAGAGTTTATGCCCCATCGCTTGCCAGATAATCTGGGCACTAAGGCAGCCAATCATACCTGCCAGCAATCCACCGa                <  1:618108/100‑1 (MQ=255)
                                                                               gATACCACGATTGCAGAAGTTGATAGAGTTTATGCCCCATCGCTTGCCAGATAATCTGGGCACTAAGGCAGCCAATCATACCTGCCAGCAATCCACCGAg               <  2:1921143/100‑1 (MQ=255)
                                                                                aTACCACGATTGCAGAAGTTGATAGAGTTTATGCCCCATCGCTTGCCAGATAATCTGGGCACTAAGGCAGCCAATCATACCTGCCAGCAATCCACCGAGc              <  1:1306432/100‑1 (MQ=255)
                                                                                   ccACGATTGCAGAAGTTGATAGAGTTTATGCCCCATCGCTTGCCAGATAATCTGGGCACTAAGGCAGCCAATCATACCTGCCAGCAATCCACCGAGCata           >  1:271310/1‑100 (MQ=255)
                                                                                    cACGATTGCAGAAGTTGATAGAGTTTATGCCCCATCGCTTGCCAGATAATCTGGGCACTAAGGCAGCCAATCATACCTGCCAGCAATCCACCGAGCata           >  2:1912097/1‑99 (MQ=255)
                                                                                    cACGATTGCAGAAGTTGATAGAGTTTATGCCCCATCGCTTGCCAGAGAATCTGGGCACTAAGGCAGCCAATCATACCTGCCAGCAATCCACCGAGc              <  2:2225680/96‑1 (MQ=255)
                                                                                        aTTGCAGAAGTTGATAGAGTTTATGCCCCATCGCTTGCCAGATAATCTGGGCACTAAGGCAGCCAATCATACCTGCCAGCAATCCACCGAGCATATCCAg      <  1:221310/100‑1 (MQ=255)
                                                                                           gCAGAAGTTGATAGAGTTTATGCCCCATCGCTTGCCAGCTAATCTGGGCACTAAGGCAGCCAATCATACCTGCCAGCAATCCACCGAGCATATCCAGCgg   <  2:1366298/100‑1 (MQ=255)
                                                                                           gCAGAAGTTGATAGAGTTTATGCCCCATCGCTTGCCAGATAATCTGGGCACTAAGGCAGCCAATCATACCTGCCAGCAATCCACCGAGCATATCCAGCgg   >  1:637624/1‑100 (MQ=255)
                                                                                           gCAGAAGTTGATAGAGTTTATGCCCCATCGCTTGCCAGATAATCTGGGCACTAAGGCAGCCAATCATACCTGCCAGCAATCCACCGAGCATATCCAGCgg   >  1:1956175/1‑100 (MQ=255)
                                                                                            cAGAAGTTGATAGAGTTTATGCCCCATCGCTTGCCAGATAATCTGGGCACTAAGGCAGCCAATCATACCTGCCAGCAATCCACCGAGCATATCCAGCGGc  <  1:2228121/100‑1 (MQ=255)
                                                                                            cAGAAGTTGATAGAGTTTATGCCCCATCGCTTGCCAGATAATCTGGGCACTAAGGCAGCCAATCATACCTGCCAGCAATCCACCGAGCATATCCAGCGGc  <  1:130481/100‑1 (MQ=255)
                                                                                            cAGAAGTTGATAGAGTTTATGCCCCATCGCTTGCCAGATAATCTGGGCACTAAGGCAGCCAATCATACCTGCCAGCAATCCACCGAGCATATCCAGCGGc  >  2:1182429/1‑100 (MQ=255)
                                                                                                |                                                                                               
GAGCCGCTCAATACTACACTTTTTAGCAGAGATCAGTCACGCACCCAGCCTTTGCGGATCGGTAATGCAAAACAGACGCGATACCACGATTGCAGACGTTGATAGAGTTTATGCCCCATCGCTTGCCAGATAATCTGGGCACTAAGGCAGCCAATCATACCTGCCAGCAATCCACCGAGCATATCCAGCGGC  >  NC_000913/882760‑882951

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: