| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,490,088 | A→G | G31G (GGT→GGC) | argD ← | bifunctional acetylornithine aminotransferase and succinyldiaminopimelate aminotransferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,490,088 | 0 | A | G | 97.3% | 257.0 / ‑2.5 | 74 | G31G (GGT→GGC) | argD | bifunctional acetylornithine aminotransferase and succinyldiaminopimelate aminotransferase |
| Reads supporting (aligned to +/- strand): ref base A (1/1); new base G (36/36); total (37/37) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.97e-01 | |||||||||||
AGCGCAGGATGGCAATGGCCCAACGCCGTAACTGCAATGCCACCCGCGAAATCGACATACTCCTTGCCTTGCTGATCCCAGATTCGGCTGCCCTGACCTTTTACCGGAATAAACTCTGCCGGAGCATAAATCGGCAGGATCACTTCATCGAAAGTCGCGCGTGTAATTGCTGTTTGTTCAATTGCCATCTC > NC_000913/3489993‑3490183 | aGCGCAGGATGGCAATGGCCCAACGCCGTAACTGCAATGCCACCCGCGAAATCGACATACTCCTTGCCTTGCTGATCCCAGATTCGGCTGCCCTGGCCtt < 1:1156487/100‑1 (MQ=255)aGCGCAGGATGGCAATGGCCCAACGCCGTAACTGCAATGCCACCCGCGAAATCGACATACTCCTTGCCTTGCTGATCCCAGATTCGGCTGCCCTGGCCtt < 1:1156603/100‑1 (MQ=255)aGCGCAGGATGGCAATGGCCCAACGCCGTAACTGCAATGCCACCCGCGAAATCGACATACTCCTTGCCTTGCTGATCCCAGATTCGGCTGCCCTGGCCtt < 1:199340/100‑1 (MQ=255) gcAGGATGGCAATGGCCCAACGCCGTAACTGCAATGCCACCCGCGAAATCGACATACTCCTTGCCTTGCTGATCCCAGATTCGGCTGCCCTGGCCTTTTa > 1:931328/1‑100 (MQ=255) cAGGATGGCAATGGCCCAACGCCGTAACTGCAATGCCACCCGCGAAATCGACATACTCCTTGCCTTGCTGATCCCAGATTCGGCTGCCCTGGCCTTTTAc > 2:1879758/1‑100 (MQ=255) cAGGATGGCAATGGCCCAACGCCGTAACTGCAATGCCACCCGCGAAATCGACATACTCCTTGCCTTGCTGATCCCAGATTCGGCTGCCCTGGCCTTTTAc < 1:1767381/100‑1 (MQ=255) cAGGATGGCAATGGCCCAACGCCATAACTGCAATGCCACCCGCGAAATCGACATACTCCTTGCCTTGCTGATCCCAGATTCGGCTGCCCTGGCCTTTTAc > 1:1982028/1‑100 (MQ=255) aGGATGGCAATGGCCCAACGCCGTAACTGCAATGCCACCCGCGAAATCGACATACTCCTTGCCTTGCTGATCCCAGATTCGGCTGCCCTGGCCTTTTAcc < 2:2165666/100‑1 (MQ=255) ggATGGCAATGGCCCAACGCCGTAACTGCAATGCCACCCGCGAAATCGACATACTCCTTGCCTTGCTGATCCCAGATTCGGCTGCCCTGGCCTTTTACCg > 1:1062564/1‑100 (MQ=255) ggATGGCAATGGCCCAACGCCGTAACTGCAATGCCACCCGCGAAATCGACATACTCCTTGCCTTGCTGATCCCAGATTCGGCTGCCCTGGCCTTTTACCg > 2:2330129/1‑100 (MQ=255) gATGGCAATGGCCCAACGCCGTAACTGCAATGCCACCCGCGAAATCGACATACTCCTTGCCTTGCTGATCCCAGATTCGGCTGCCCTGGCCTTTTACCgg < 1:2056155/100‑1 (MQ=255) gATGGCAATGGCCCAACGCCGTAACTGCAATGCCACCCGCGAAATCGACATACTCCTTGCCTTGCTGATCCCAGATTCGGCTGCCCTGGCCTTTTACCgg < 2:1062562/100‑1 (MQ=255) gATGGCAATGGCCCAACGCCGTAACTGCAATGCCACCCGCGAAATCGACATACTCCTTGCCTTGCTGATCCCAGATTCGGCTGCCCTGGCCTTTTACCgg < 1:1602758/100‑1 (MQ=255) aTGGCAATGGCCCAACGCCGTAACTGCAATGCCACCCGCGAAATCGACATACTCCTTGCCTTGCTGATCCCAGATTCGGCTGCCCTGGCCTTTTACCGGa > 1:574531/1‑100 (MQ=255) ggCAATGGCCCAACGCCGTAACTGCAATGCCACCCGCGAAATCGACATACTCCTTGCCTTGCTGATCCCAGATTCGGCTGCCCTGGCCTTTTACCGGAAt < 1:1448505/100‑1 (MQ=255) ggCAATGGCCCAACGCCGTAACTGCAATGCCACCCGCGAAATCGACATACTCCTTGCCTTGCTGATCCCAGATTCGGCTGCCCTGGCCTTTTACCGGAAt > 2:2277021/1‑100 (MQ=255) ggCAATGGCCCAACGCCGTAACTGCAATGCCACCCGCGAAATCGACATACTCCTTGCCTTGCTGATCCCAGATTCGGCTGCCCTGGCCTTTTACCGGAAt < 2:316667/100‑1 (MQ=255) gCAATGGCCCAACGCCGTAACTGCAATGCCACCCGCGAAATCGACATACTCCTTGCCTTGCTGATCCCAGATTCGGCTGCCCTGGCCTTTTACCGGAATa > 2:1178973/1‑100 (MQ=255) cAATGGCCCAACGCCGTAACTGCAATGCCACCCGCGAAATCGACATACTCCTTGCCTTGCTGATCCCAGATTCGGCTGCCCTGGCCTTTTACCGGAATaa > 2:1282859/1‑100 (MQ=255) aTGGCCCAACGCCGTAACTGCAATGCCACCCGCGAAATCGACATACTCCTTGCCTTGCTGATCCCAGATTCGGCTGCCCTGGCCTTTTACCGGAATAAAc < 2:2101521/100‑1 (MQ=255) ngCCCAACGCCGTAACTGCAATGCCACCCGCGAAATCGACATACTCCTTGCCTTGCTGATCCCAGATTCGGCTGCCCTGGCCTTTTACCGGAATAAActc > 1:1124299/2‑100 (MQ=255) ggCCCAACGCCGTAACTGCAATGCCACCCGCGAAATCGACATACTCCTTGCCTTGCTGATCCCAGATTCGGCTGCCCTGGCCTTTTACCGGAATAAActc > 1:594637/1‑100 (MQ=255) ggCCCAACGCCGTAACTGCAATGCCACCCGCGAAATCGACATACTCCTTGCCTTGCTGATCCCAGATTCGGCTGCCCTGGCCTTTTACCGGAATAAActc > 1:1632013/1‑100 (MQ=255) aaCGCCGTAACTGCAATGCCACCCGCGAAATCGACATACTCCTTGCCTTGCTGATCCCAGATTCGGCTGCCCTGGCCTTTTACCGGAATAAACTCTGCCg > 1:703470/1‑100 (MQ=255) aaCGCCGTAACTGCAATGCCACCCGCGAAATCGACATACTCCTTGCCTTGCTGATCCCAGATTCGGCTGCCCTGGCCTTTTACCGGAATAAACTCTGCCg < 1:1179838/100‑1 (MQ=255) aaCGCCGTAACTGCAATGCCACCCGCGAAATCGACATACTCCTTGCCTTGCTGATCCCAGATTCGGCTGCCCTGGCCTTTTACCGGAATAAACTCTGCCg < 2:1234776/100‑1 (MQ=255) gCCGTAACTGCAATGCCACCCGCGAAATCGACATACTCCTTGCCTTGCTGATCCCAGATTCGGCTGCCCTGGCCTTTTACCGGAATAAACTCTGCCGGAg < 2:594636/100‑1 (MQ=255) ccGTAACTGCAATGCCACCCGCGAAATCGACATACTCCTTGCCTTGCTGATCCCAGATTCGGCTGCCCTGGCCTTTTACCGGAATAAACTCTGCCGGAGc < 1:846106/100‑1 (MQ=255) cGTAACTGCAATGCCACCCGCGAAATCGACATACTCCTTGCCTTGCTGATCCCAGATTCGGCTGCCCTGGCCTTTTACCGGAATAAACTCTGCCGGAGCa > 2:1244960/1‑100 (MQ=255) aCTGCAATGCCACCCGCGAAATCGACATACTCCTTGCCTTGCTGATCCCAGATTCGGCTGCCCTGGCCTTTTACCGGAATAAACTCTGCCGGAGCATaaa < 1:1222748/100‑1 (MQ=255) tGCAATGCCACCCGCGAAATCGACATACTCCTTGCCTTGCTGATCCCAGATTCGGCTGCCCTGGCCTTTTACCGGAATAAACTCTGCCGGAGCATAAATc < 1:1178976/100‑1 (MQ=255) tGCAATGCCACCCGCGAAATCGACATACTCCTTGCCTTGCTGATCCCAGATTCGGCTGCCCTGGCCTTTTACCGGAATAAACTCTGCCGGAGCATAAATc > 1:414027/1‑100 (MQ=255) gCAATGCCACCCGCGAAATCGACATACTCCTTGCCTTGCTGATCCCAGATTCGGCTGCCCTGGCCTTTTACCGGAATAAACTCTGCCGGAGCATAAATCg > 1:1768004/1‑100 (MQ=255) aaTGCCACCCGCGAAATCGACATACTCCTTGCCTTGCTGATCCCAGATTCGGCTGCCCTGGCCTTTTACCGGAATAAACTCTGCCGGAGCATAAATCGGc < 1:559218/100‑1 (MQ=255) aTGCCACCCGCGAAATCGACATACTCCTTGCCTTGCTGATCCCAGATTCGGCTGCCCTGGCCTTTTACCGGAATAAACTCTGCCGGAGCATAAATCGGCa < 1:1288971/100‑1 (MQ=255) gCCACCCGCGAAATCGACATACTCCTTGCCTTGCTGATCCCAGATTCGGCTGCCCTGGCCTTTTACCGGAATAAACTCTGCCGGAGCATAAATCGGCAgg > 1:402648/1‑100 (MQ=255) cACCCGCGAAATCGACATACTCCTTGCCTTGCTGATCCCAGATTCGGCTGCCCTGACCTTTTACCGGAATAAACTCTGCCGGAGCATAAATCGGCAGGAt > 1:960012/1‑100 (MQ=255) cgcgAAATCGACATACTCCTTGCCTTGCTGATCCCAGATTCGGCTGCCCTGGCCTTTTACCGGAATAAACTCTGCCGGAGCATAAATCGGCAGGATCACt < 1:1959652/100‑1 (MQ=255) cgcgAAATCGACATACTCCTTGCCTTGCTGATCCCAGATTCGGCTGCCCTGGCCTTTTACCGGAATAAACTCTGCCGGAGCATAAATCGGCAGGATCACt > 2:693861/1‑100 (MQ=255) gACATACTCCTTGCCTTGCTGATCCCAGATTCGGCTGCCCTGGCCTTTTACCGGAATAAACTCTGCCGGAGCATAAATCGGCAGGATCACTTCATCGaaa < 2:531655/100‑1 (MQ=255) gACATACTCCTTGCCTTGCTGATCCCAGATTCGGCTGCCCTGGCCTTTTACCGGAATAAACTCTGCCGGAGCATAAATCGGCAGGATCACTTCATCGaaa > 2:1846206/1‑100 (MQ=255) gACATACTCCTTGCCTTGCTGATCCCAGATTCGGCTGCCCTGGCCTTTTACCGGAATAAACTCTGCCGGAGCATAAATCGGCAGGATCACTTCATCGaaa > 1:1491057/1‑100 (MQ=255) gACATACTCCTTGCCTTGCTGATCCCAGATTCGGCTGCCCTGGCCTTTTACCGGAATAAACTCTGCCGGAGCATAAATCGGCAGGATCACTTCATCGaaa > 2:1765988/1‑100 (MQ=255) gACATACTCCTTGCCTTGCTGATCCCAGATTCGGCTGCCCTGGCCTTTTACCGGAATAAACTCTGCCGGAGCATAAATCGGCAGGATCACTTCATCGaaa < 1:1201022/100‑1 (MQ=255) tcttACTCCTTGCCTTGCTGATCCCAGATTCGGCTGCCCTGGCCTTTTACCGGAATAAACTCTGCCGGAGCATAAATCGGCAGGATCACTTCATCGAAAg < 2:353189/97‑1 (MQ=255) aTACTCCTTGCCTTGCTGATCCCAGATTCGGCTGCCCTGGCCTTTTACCGGAATAAACTCTGCCGGAGCATAAATCGGCAGGATCACTTCATCGAAAGTc > 1:2238517/1‑100 (MQ=255) tACTCCTTGCCTTGCTGATCCCAGATTCGGCTGCCCTGGCCTTTTACCGGAATAAACTCTGCCGGAGCATAAATCGGCAGGATCACTTCATCGAAAgaga > 1:353191/1‑97 (MQ=255) tCCTTGCCTTGCTGATCCCAGATTCGGCTGCCCTGGCCTTTTACCGGAATAAACTCTGCCGGAGCATAAATCGGCAGGATCACTTCATCGAAAGTcgcgc < 1:2165629/100‑1 (MQ=255) tCCTTGCCTTGCTGATCCCAGATTCGGCTGCCCTGGCCTTTTACCGGAATAAACTCTGCCGGAGCATAAATCGGCAGAATCACTTCATCGAAAGTcgcgc < 2:1632008/100‑1 (MQ=255) tgccttgcTGATCCCAGATTCGGCTGCCCTGGCCTTTTACCGGAATAAACTCTGCCGGAGCATAAATCGGCAGGATCACTTCATCGAAAGTCGCGCgtgt > 1:1481160/1‑100 (MQ=255) cttgcTGATCCCAGATTCGGCTGCCCTGGCCTTTTACCGGAATAAACTCTGCCGGAGCATAAATCGGCAGGATCACTTCATCGAAAGTCGCGCGTGTAAt < 1:1567881/100‑1 (MQ=255) cttgcTGATCCCAGATTCGGCTGCCCTGGCCTTTTACCGGAATAAACTCTGCCGGAGCATAAATCGGCAGGATCACTTCATCGAAAGTCGCGCGTGTAAt > 1:1371177/1‑100 (MQ=255) cttccgatctccAGATTCGGCTGCCCTGGCCTTTTACCGGAATAAACTCTGCCGGAGCATAAATCGGCAGGATCACTTCATCGAAAGTCGCGCGTGTAAt < 2:1755031/90‑1 (MQ=255) tgcTGATCCCAGATTCGGCTGCCCTGGCCTTTTACCGGAATAAACTCTGCCGGAGCATAAATCGGCAGGATCACTTCATCGAAAGTCGCGCGTGTAATTg < 2:931326/100‑1 (MQ=255) tgcTGATCCCAGATTCGGCTGCCCTGGCCTTTTACCGGAATAAACTCTGCCGGAGCATAAATCGGCAGGATCACTTCATCGAAAGTCGCGCGTGTAATTg > 1:2098180/1‑100 (MQ=255) tgcTGATCCCAGATTCAGCTGCCCTGGCCTTTTACCGGAATAAACTCTGCCGGAGCATAAATCGGCAGGATCACTTCATCGAAAGTCGCGCGTGTAATTg > 1:2012439/1‑100 (MQ=255) gcTGATCCCAGATTCGGCTGCCCTGGCCTTTTACCGGAATAAACTCTGCCGGAGCATAAATCGGCAGGATCACTTCATCGAAAGTCGCGCGTGTAATTGc > 1:1989937/1‑100 (MQ=255) cTGATCCCAGATTCGGCTGCCCTGACCTTTTACCGGAATAAACTCTGCCGGAGCATAAATCGGCAGGATCACTTCATCGAAAGTCGCGCGTGTAATTGCt < 2:277409/100‑1 (MQ=255) gATCCCAGATTCGGCTGCCCTGGCCTTTTACCGGAATAAACTCTGCCGGAGCATAAATCGGCAGGATCACTTCATCGAAAGTCGCGCGTGTAATTGCtgt > 1:1095156/1‑100 (MQ=255) gATCCCAGATTCGGCTGCCCTGGCCTTTTACCGGAATAAACTCTGCCGGAGCATAAATCGGCAGGATCACTTCATCGAAAGTCGCGCGTGTAATTGCtgt > 1:1249116/1‑100 (MQ=255) aTCCCAGATTCGGCTGCCCTGGCCTTTTACCGGAATAAACTCTGCCGGAGCATAAATCGGCAGGATCACTTCATCGAAAGTCGCGCGTGTAATTGCtgtt > 2:2217054/1‑100 (MQ=255) aTCCCAGATTCGGCTGCCCTGGCCTTTTACCGGAATAAACTCTGCCGGAGCATAAATCGGCAGGATCACTTCATCGAAAGTCGCGCGTGTAATTGCtgtt < 2:414025/100‑1 (MQ=255) cccAGATTCGGCTGCCCTGGCCTTTTACCGGAATAAACTCTGCTGGAGCATAAATCGGCAGGATCACTTCATCGAAAGTCGCGCGTGTAATTGCtgtttg < 2:1491053/100‑1 (MQ=255) cccAGATTCGGCTGCCCTGGCCTTTTACCGGAATAAACTCTGCCGGAGCATAAATCGGCAGGATCACTTCATCGAAAGTCGCGCGTGTAATTGCtgtttg > 2:1381486/1‑100 (MQ=255) ccAGATTCGGCTGCCCTGGCCTTTTACCGGAATAAACTCTGCCGGAGCATAAATCGGCAGGATCACTTCATCGAAAGTCGCGCGTGTAAtagatcggaag > 1:1755036/1‑90 (MQ=255) ccAGATTCGGCTGCCCTGGCCTTTTACCGGAATAAACTCTGCCGGAGCATAAATCGGCAGGATCACTTCATCGAAAGTCGCGCGTGTAATTGCtgtttgt < 1:748526/100‑1 (MQ=255) ccAGATTCGGCTGCCCTGGCCTTTTACCGGAATAAACTCTGCCGGAGCATAAATCGGCAGGATCACTTCATCGAAAGTCGCGCGTGTAATTGCtgtttgt > 1:1723324/1‑100 (MQ=255) ccAGATTCGGCTGCCCTGGCCTTTTACCGGAATAAACTCTGCCGGAGCATAAATCGGCAGGATCACTTCATCGAAAGTCGCGCGTGTAATTGCtgtttgt > 1:1681984/1‑100 (MQ=255) cGGCTGCCCTGGCCTTTTACCGGAATAAACTCTGCCGGAGCATAAATCGGCAGGATCACTTCATCGAAAGTCGCGCGTGTAATTGCTGTTTGTTCAATTg < 2:1590016/100‑1 (MQ=255) ggCTGCCCTGGCCTTTTACCGGAATAAACTCTGCCGGAGCATAAATCGGCAGGATCACTTCATCGAAAGTCGCGCGTGTAATTGCTGTTTGTTCAAttn < 2:1124297/99‑2 (MQ=255) cTGCCCTGGCCTTTTACCGGAATAAACTCTGCCGGAGCATAAATCGGCAGGATCACTTCATCGAAAGTCGCGCGTGTAATTGCTGTTTGTTCAATTGCCa < 2:1766936/100‑1 (MQ=255) tGCCCTGGCCTTTTACCGGAATAAACTCTGCCGGAGCATAAATCGGCAGGATCACTTCATCGAAAGTCGCGCGTGTAATTGCTGTTTGTTCAATTGCCAt < 2:2083567/100‑1 (MQ=255) gCCCTGGCCTTTTACCGGAATAAACTCTGCCGGAGCATAAATCGGCAGGATCACTTCATCGAAAGTCGCGCGTGTAATTGCTGTTTGTTCAATTGCCAtc > 1:2252938/1‑100 (MQ=255) ccTGGCCTTTTACCGGAATAAACTCTGCCGGAGCATAAATCGGCAGGATCACTTCATCGAAAGTCGCGCGTGTAATTGCTGTTTGTTCAATTGCCAtctc < 2:703469/100‑1 (MQ=255) | AGCGCAGGATGGCAATGGCCCAACGCCGTAACTGCAATGCCACCCGCGAAATCGACATACTCCTTGCCTTGCTGATCCCAGATTCGGCTGCCCTGACCTTTTACCGGAATAAACTCTGCCGGAGCATAAATCGGCAGGATCACTTCATCGAAAGTCGCGCGTGTAATTGCTGTTTGTTCAATTGCCATCTC > NC_000913/3489993‑3490183 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |