| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 1,446,972 | Δ1 bp | 100% | coding (312/906 nt) | feaR ← | transcriptional activator for tynA and feaB |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,446,969 | 0 | G | . | 51.3% | 185.5 / 276.4 | 113 | coding (315/906 nt) | feaR | transcriptional activator for tynA and feaB |
| Reads supporting (aligned to +/- strand): ref base G (24/31); new base . (27/31); total (51/62) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 8.50e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.83e-01 | |||||||||||
Only 100 of 122 total aligned reads displayed.
TGCGCAGATAGGTTTTTGATGGGGAAAATATTGTTCCAGCAGAGTGCGTGGCAAAAGTAATGAAATCTGTTTAGAAGACTCCTGCCAGTAAAGCGAACAGGGGCGTGAGGCATCGAGTAACGTAATATCGCCAGCGCCAATCTGCACCTGACGCTCATCCTGCTCCATTATTGCCTGACCACTAAGCTGAAAAACGGTG > NC_000913/1446870‑1447068 | tGCGCAGATAGGTTTTTGATGGGGAAAATATTGTTCCAGCAGAGTGCGTGGCAAAAGTAATGAAATCTGTTTAGAAGACTCCTGCCAGTAAAGCGAACAg > 1:2978530/1‑100 (MQ=255)tGCGCAGATAGGTTTTTGATGGGGAAAATATTGTTCCAGCAGAGTGCGTGGCAAAAGTAATGAAATCTGTTTAGAAGACTCCTGCCAGTAAAGCGAACAg > 2:591305/1‑100 (MQ=255) gcgcAGATAGGTTTTTGATGGGGAAAATATTGTTCCAGCAGAGTGCGTGGCAAAAGTAATGAAATCTGTTTAGAAGACTCCTGCCAGTAAAGCGAACAgg > 2:654903/1‑100 (MQ=255) aGATAGGTTTTTGATGGGGAAAATATTGTTCCAGCAGAGTGCGTGGCAAAAGTAATGAAATCTGTTTAGAAGACTCCTGCCAGTAAAGCGAACAgggcgt < 1:3396248/100‑4 (MQ=255) aGATAGGTTTTTGATGGGGAAAATATTGTTCCAGCAGAGTGCGTGGCAAAAGTAATGAAATCTGTTTAGAAGACTCCTGCCAGTAAAGCGAACAgggcgt < 2:230145/100‑4 (MQ=255) aGATAGGTTTTTGATGGGGAAAATATTGTTCCAGCAGAGTGCGTGGCAAAAGTAATGAAATCTGTTTAGAAGACTCCTGCCAGTAAAGCGAACAgggcgt > 2:1326852/1‑97 (MQ=255) gATAGGTTTTTGATGGGGAAAATATTGTTCCAGCAGAGTGCGTGGCAAAAGTAATGAAATCTGTTTAGAAGACTCCTGCCAGTAAAGCGAACAGGGGCGt < 1:3733116/100‑1 (MQ=255) gATAGGTTTTTGATGGGGAAAATATTGTTCCAGCAGAGTGCGTGGCAAAAGTAATGAAATCTGTTTAGAAGACTCCTGCCAGTAAAGCGAACAGGGGCGt < 1:2190541/100‑1 (MQ=255) ggTTTTTGATGGGGAAAATATTGTTCCAGCAGAGTGCGTGGCAAAAGTAATGATATCTGTTTAGAAGACTCCTACCAGTAAAGCGAACAgagcgtcaggc > 2:2547789/1‑90 (MQ=255) ggTTTTTGATGGGGAAAATATTGTTCCAGCAGAGTGCGTGGCAAAAGTAATGAAATCTGTTTAGAAGACTCCTGCCAGTAAAGCGAACAGGGGCGTGAgg < 1:2096297/100‑1 (MQ=255) ggTTTTTGATGGGGAAAATATTGTTCCAGCAGAGTGCGTGGCAAAAGTAATGAAATCTGTTTAGAAGACTCCTGCCAGTAAAGCGAACA‑GGGCGTGAGGc < 1:1326861/100‑1 (MQ=255) ggTTTTTGATGGGGAAAATATTGTTCCAGCAGAGTGCGTGGCAAAAGTAATGAAATCTGTTTAGAAGACTCCTGCCAGTAAAGCGAACA‑GGGCGTGAGGc > 2:2751184/1‑100 (MQ=255) gTTTTTGATGGGGAAAATATTGTTCCAGCAGAGTGCGTGGCAAAAGTAATGAAATCTGTTTAGAAGACTCCTGCCAGTAAAGCGAACA‑GGGCGTGAGGCa > 1:2426218/1‑100 (MQ=255) ttttGATGGGGAAAATATTGTTCCAGCAGAGTGCGTGGCAAAAGTAATGAAATCTGTTTAGAAGACTCCTGCCAGTAAAGCGAACAGGGGCGTGAGGCAt > 2:613157/1‑100 (MQ=255) tttGATGGGGAAAATATTGTTCCAGCAGAGTGCGTGGCAAAAGTAATGAAATCTGTTTAGAAGACTCCTGCCAGTAAAGCGAACA‑GGGCGTGAGGCATCg < 1:4116690/100‑1 (MQ=255) tGATGGGGAAAATATTGTTCCAGCAGAGTGCGTGGCAAAAGTAATGAAATCTGTTTAGAAGACTCCTGCCAGTAAAGCGAACAGGGGCGTGAGGCATCGa < 1:95564/100‑1 (MQ=255) tGAGGGGGAAAATATGGTTCGAGCAGAGTGCGTGGGAAAAGTAATGAAATCGGTTTAGAAGACTCCTGCCAGTAAAGCGAACA‑GGGCGTGAGGCATCg < 2:1023119/98‑1 (MQ=255) tGGGGAAAATATTGTTCCAGCAGAGTGCGTGGCAAAAGTAATGAAATCTGTTTAGAAGACTCTTGCCATTAAAGCGAGCAGGGACGTGAGGCCTCGa > 2:2785087/1‑97 (MQ=255) tGGGGAAAATATTGTTCCAGCAGAGTGCGTGGCAAAAGTAATGAAATCTGTTTAGAAGACTCCTGCCAGTAAAGCGAACAGGGGCGTGAGGCATCGAGTa < 1:1936403/100‑1 (MQ=255) ggggAAAATATTGTTCCAGCAGAGTGCGTGGCAAAAGTAATGAAATCTGTTTAGAAGACTCCTGCCAGTAAAGCGAACA‑GGGCGTGAGGCATCGAGTAAc > 2:4126039/1‑100 (MQ=255) gggAAAATATTGTTCCAGCAGAGTGCGTGGCAAAAGTAATGAAATCTGTTTAGAAGACTCCTGCCAGTAAAGCGAACA‑GGGCGTGAGGCATCGAGTAACg > 1:2466818/1‑100 (MQ=255) ggAAAATATTGTTCCAGCAGAGTGCGTGGCAAAAGTAATGAAATCTGTTTAGAAGACTCCTGCCAGTAAAGCGAACAGGGGCGTGAGGCATCGAGTAACg < 1:3578242/100‑1 (MQ=255) ggAAAATATTGTTCCAGCAGAGTGCGTGGCAAAAGTAATGAAATCTGTTTAGAAGACTCCTGCCAGTAAAGCGAACA‑GGGCGTGAGGCATCGAGTAACGt > 2:1040955/1‑100 (MQ=255) aaaaTATTGTTCCAGCAGAGTGCGTGGCAAAAGTAATGAAATCTGTTTAGAAGACTCCTGCCAGTAAAGCGAACA‑GGGCGTGAGGCATCGAGTAACg > 2:3888347/1‑97 (MQ=255) atTGTTCCAGCAGAGTGCGTGGCAAAAGTAATGAAATCTGTTTAGAAGACTCCTGCCAGTAAAGCGAACA‑GGGCGTGAAGCATCGAGTAACGTAATATCg < 2:1347824/100‑1 (MQ=255) tGTTCCAGCAGAGTGCGTGGCAAAAGTAATGAAATCTGTTTAGAAGACTCCTGCCAGTAAAGCGAACA‑GGGCGTGAGGCATCGAGTAACGTAATATCGcc < 1:1492136/100‑1 (MQ=255) gTTCCAGCAGAGTGCGTGGCAAAAGTAATGAAATCTGTTTAGAAGACTCCTGCCAGTAAAGCGAACA‑GGGCGTGAGGCATCGAGTAACGTAATATCGCCa > 2:325329/1‑100 (MQ=255) tCCAGCAGAGTGCGTGGCAAAAGTAATGAAATCTGTTTAGAAGGCTCCTGCCAGTAAAGCGAACA‑GGGCGTGAGGCATCGAGTAACGTAATATCg < 2:2594654/95‑1 (MQ=255) ccAGCAGAGTGCGTGGCAAAAGTAATGAAATCTGTTTAGAAGACTCCTGCCAGTAAAGCGAACAGGGGCGTGAGGCATCGAGTAACGTAATATCGCCAgc < 1:3614827/100‑1 (MQ=255) ccAGCAGAGTGCGTGGCAAAAGTAATGAAATCTGTTTAGAAGACTCCTGCCAGTAAAGCGAACA‑GGGCGTGAGGCATCGAGTAACGTAATATCGCCAgcg < 1:3196330/100‑1 (MQ=255) gcagAGTGCGTGGCAAAAGTAATGAAATCTGTTTAGAAGACTCCTGCCAGTAAAGCGAACAGGGGCGTGAGGCATCGAGTAACGTAATATCGCCAGCGcc > 1:3334875/1‑100 (MQ=255) gagTGCGTGGCAAAAGTAATGAAATCTGTTTAGAAGACTCCAGCCAGTAAAGCGAACAGGGACGTGAGGCATCGAGTAACGTAATATCGCCAGCGCCAAt > 2:2253184/1‑100 (MQ=255) gagTGCGTGGCAAAAGTAATGAAATCTGTTTAGAAGACTCCAGCCAGTAAAGCGAACAGGGACGTGAGGCATCGAGTAACGTAATATCGCCAGCGCCAAt > 2:2255434/1‑100 (MQ=255) gTGCGTGGCAAAAGTAATGAAATCTGTTTAGAAGACTCCTGCCAGTAAAGCGAACAGGGGCGTGAGGCATCGAGTAACGTAATATCGCCAGCGCCAATCt > 2:1977897/1‑100 (MQ=255) gTGCGTGGCAAAAGTAATGAAATCTGTTTAGAAGACTCCTGCCAGTAAAGCGAACAGGGGCGTGAGGCATCGAGTAACGTAATATCGCCAGCGCCAATCt < 1:3016213/100‑1 (MQ=255) gTGCGTGGCAAAAGTAATGAAATCTGTTTAGAAGACTCCTGCCAGTAAAGCGAACA‑GGGCGTGAGGCATCGAGTAACGTAATATCGCCAGCGCCAATCTg < 2:2806338/100‑1 (MQ=255) tGCGTGGCAAAAGTAATGAAATCTGTTTAGAAGACTCCTGCCAGTAAAGCGAACAGGGGCGTGAGGCATCGAGTAACGTAATATCGCCAGCGCCAATCTg < 2:2547088/100‑1 (MQ=255) tGCGTGGCAAAAGTAATGAAATCTGTTCAGAAGACTCCTGCCAGTAAAGCGAACAGGGGCGTGAGGCATCGAGTAACGTAATATCGCCAGCGCCAATCTg < 2:2554475/100‑1 (MQ=255) gCGTGGCAAAAGTAATGAAATCTGTTTAGAAGACTCCTGCCAGTAAAGCGAACA‑GGGCGTGAGGCATCGAGTAACGTAATATCGCCAGCGCCAATCTGc > 2:2969188/1‑99 (MQ=255) cGTGGCAAAAGTAATGAAATCTGTTTAGAAGACTCCTGCCAGTAAAGCGAACA‑GGGCGTGAGGCATCGAGTAACGTAATATCGCCAGCGCCAATCTGCAc < 1:3173363/100‑1 (MQ=255) cGTGGCAAAAGTAATGAAATCTGTTTAGAAGACTCCTGCCAGTAAAGCGAACA‑GGGCGTGAGGCATCGAGTAACGTAATATCGCCAGCGCCAATCTGCAc < 1:1119011/100‑1 (MQ=255) gTGGCAAAAGTAATGAAATCTGTTTAGAAGACTCCTGCCAGTAAAGCGAACAGGGGCGTGAGGCATCGAGTAACGTAATATCGCCAGCGCCAATCTGCAc < 1:2307467/100‑1 (MQ=255) gTGGCAAAAGTAATGAAATCTGTTTAGAAGACTCCTGCCAGTAAAGCGAACA‑GGGCGTGAGGCATCGAGTAACGTAATATCGCCAGCGCCAATCTGCAcc < 1:3279605/100‑1 (MQ=255) gTGGCAAAAGTAATGAAATCTGTTTAGAAGACTCCTGCCAGTAAAGCGAACA‑GGGCGTGAGGCATCGAGTAACGTAATATCGCCAGCGCCAATCTGCAcc > 2:282019/1‑100 (MQ=255) gCAAAAGTAATGAAATCTGTTTAGAAGACTCCTGCCAGTAAAGCGAACAGGGGCGTGAGGCATCGAGTAACGTAATATCGCCAGCGCCAATCTGCACCTg > 1:456178/1‑100 (MQ=255) cAAAAGTAATGAAATCTGTTTAGAAGACTCCTGCCAGTAAAGCGAACAGGGGCGTGAGGCATCGAGTAACGTAATATCGCCAGCGCCAATCTGCACCTGa > 2:430191/1‑100 (MQ=255) cAAAAGTAATGAAATCTGTTTAGAAGACGCCTGCCAGTAAAGCGAACA‑GGGCGTGAGGCATCGAGTAACGTAATATCGCCAGCGCCAATCTGCAcc < 2:4009456/96‑1 (MQ=255) aaaaGTAATGAAATCTGTTTAGAAGACTCCTGCCAGTAAAGCGAACA‑GGGCGTGAGGCATCGAGTAACGTAATATCGCCAGCGCCAATCTGCACCTGACg < 2:2426204/100‑1 (MQ=255) aGTAATGAAATCTGTTTAGAAGTCTCCTGCCAGTAAAGCGAACAGGGGCGTGAGGCATCGAGTAACGTAATATCGCCAGCGCCAATCTGCACCTGACGc < 2:4126881/99‑1 (MQ=255) aGTAATGAAATCTGTTTAGAAGACGCCTGCCAGTAAAGCGAACAGGGGCGTGAGGCATCGAGTAACGTAATATCGCCAGCGCCAATCTGCACCTGACGCt < 1:613163/100‑1 (MQ=255) gTAATGAAATCTGTTTAGAAGACTCCTGCCAGTAAAGCGAACAGGGGCGTGAGGCATCGAGTAACGTAATATCGCCAGCGCCAATCTGCACCTGACGCTc < 2:456174/100‑1 (MQ=255) aaggAAATCTGTTTAGAAGATGCCTGCCAGTAAAGCGAACAGGGGCGTGAGGCATCGAGTAACGTAATATCGCCAGCGCCAATCTGCACCTGACGc < 2:3121688/93‑1 (MQ=255) aaTGAAATCTGTTTAGAAGACTCCTGCCAGTAAAGCGAACA‑GGGTGTGAGGCATCGAGTAACGTAATATCGCCAGCGCCAATCTGCACCTGACGCTCATc > 1:2402887/1‑100 (MQ=255) aTGAAATCTGTTTAGAAGGCTCCTGCCAGTAAAGCGAACA‑GGGCGTGAGGCATCGAGTAACGTAATATCGCCAGCGCCAATCTGCACCTGACGCTCATcc < 2:2095033/100‑1 (MQ=255) aTGAAATCTGTTTAGAAGACTCCTGCCAGTAAAGCGAACAGGGGCGTGAGGCATCGAGTAACGTAATATCGCCAGCGCCAATCTGCACCTGACGCTCATc < 2:1403237/100‑1 (MQ=255) aTGAAATCTGTTTAGAAGACCCCTGCCAGTAAAGCGAACA‑GGGCGTGAGGCATCGAGTAACGTAATATCGCCAGCGCCAATCTGCACCTGACGCTCATcc < 1:3043280/100‑1 (MQ=255) tGAAATCTGTTTAGAAGACTCCTGCCAGTAAAGCGAACAGGGGCGTGAGGCATCGAGTAACGTAATATCGCCAGCGCCAATCTGCACCTGACGCTCATcc < 1:1134953/100‑1 (MQ=255) aaaTCTGTTTAGAAGACTCCTGCCAGTAAAGCGAACA‑GGGCGTGAGGCATCGAGTAACGTAATATCGCCAGCGCCAATCTGCACCTGACGCTCATCCTGc > 1:298281/1‑100 (MQ=255) aaaTCTGTTTAGAAGACTCCTGCCAGTAAAGCGAACA‑GGGCGTGAGGCATCGAGTAACGTAATATCGCCAGCGCCAATCTGCACCTGACGCTCATCCTGc > 1:37028/1‑100 (MQ=255) aaTCTGTTTAGAAGACTCCTGCCAGTAAAGCGAACAGGGGCGTGAGGCATCGAGTAACGTAATATCGCCAGCGCCAATCTGCACCTGACGCTCATCCTGc < 1:1451522/100‑1 (MQ=255) aaTCTGTTTAGAAGACTCCTGCCAGTAAAGCGAACA‑GGGCGTGAGGCATCGAGTAACGTAATATCGCCAGCGCCAATCTGCACCTGACGCTCATCCTGCt > 1:2131784/1‑100 (MQ=255) aTCTGTTTAGAAGACTCCTGCCAGTAAAGCGAACA‑GGGCGTGAGGCATCGAGTAACGTAATATCGCCAGCGCCAATCTGCACCTGACGCTCATCCTGCTc > 2:3835302/1‑100 (MQ=255) tCTGTTTAGAAGACTCCTGCCAGTAAAGCGAACAGGGGCGTGAGGCATCGAGTAACGTAATATCGCCAGCGCCAATCTGCACCTGACGCTCATCCTGCTc > 1:1092896/1‑100 (MQ=255) cTGTTTAGAAGACTCCTGCCAGTAAAGCGAACAGGGGCGTGAGGCATCGAGTAACGTAATATCGCCAGCGCCAATCTGCACCTGACGCTCATCCTGCTcc > 2:15846/1‑100 (MQ=255) cTGTTTAGAAGACTCCTGCCAGTAAAGCGAACAGGGGCGTGAGGCATCGAGTAACGTAATATCGCCAGCGCCAATCTGCACCTGACGCTCATCCTGCTcc < 1:1873334/100‑1 (MQ=255) tGTTTAGAAGACTCCTGCCAGTAAAGCGAACAGGGGCGTGAGGCATCGAGTAACGTAATATCGCCAGCGCCAATCTGCACCTGACGCTCATCCTGCTCCa > 1:3927713/1‑100 (MQ=255) gTTTAGAAGACTCCTGCCAGTAAAGCGAACAGGGGCGTGAGGCATCGAGTAACGTAATATCGCCAGCGCCAATCTGCACCTGACGCTCATCCTGCTCCat > 1:4006295/1‑100 (MQ=255) gTTTAGAAGACTCCTGCCAGTAAAGCGAACAGGGGCGTGAGGCATCGAGTAACGTAATATCGCCAGCGCCAATCTGCACCTGACGCTCATCCTGCTCCat > 1:1436458/1‑100 (MQ=255) ttAGAAGACTCCTGCCAGTAAAGCGAACAGGGGCGTGAGGCATCGAGTAACGTAATATCGCCAGCGCCAATCTGCACCTGACGCTCATCCTGCTCCatta > 1:466682/1‑100 (MQ=255) tAGAAGACTCCTGCCAGTAAAGCGAACA‑GGGCGTGAGGCATCGAGTAACGTAATATCGCCAGCGCCAATCTGCACCTGACGCTCATCCTGCTCCattatt < 2:3845375/100‑1 (MQ=255) tAGAAGACTCCTGCCAGTAAAGCGAACA‑GGGCGGGAGGCATCGAGTAACGTAATATCGCCAGCGCCAATCTGCACCTGACGCTCATCCTGCTCCattatt < 2:808476/100‑1 (MQ=255) agaagaCTCCTGCCAGTAAAGCGAACAGGGGCGTGAGGCATCGAGTAACGTAATATCGCCAGCGCCAATCTGCACCTGACGCTCATCCTGCTCCattatt > 2:3238801/1‑100 (MQ=255) agaagaCTCCTGCCAGTAAAGCGAACA‑GGGCGTGAGGCATCGAGTAACGTAATATCGCCAGCGCCAATCTGCACCTGACGCTCATCCTGCTCCATTATTg > 1:371400/1‑100 (MQ=255) gaagaCTCCTGCCAGTAGAGCGAACA‑GGGCGTGAGGGCTCGAGTAACGTCATATCGCCAGCGCCAATCAGCACCTGACGCTCATACTGCTCCATTATTGc > 2:3747247/1‑100 (MQ=255) gaagaCTCCTGCCAGTAAAGCGAACAGGGGCGTGAGGCATCGAGTAACGTAATATCGCCAGCGCCAATCTGCACCTGACGCTCATCCTGCTCCattatt > 2:507634/1‑99 (MQ=255) gaagaCTCCTGCCAGTAAAGCGAACAGGGGCGTGAGGCATCGAGTAACGTAATATCGCCAGCGCCAATCTGCACCTGACGCTCATCCTGCTCCATTATTg < 1:3459414/100‑1 (MQ=255) aagaCTCCTGCCAGTAAAGCGAACAGGGGCGTGAGGCATCGAGTAACGTAATATCGCCAGCGCCAATCTGCACCTGACGCTCATCCTGCTCCATTATTGc < 1:3075574/100‑1 (MQ=255) aagaCTCCTGCCAGTAAAGCGAACA‑GGGCGTGAGGCATCGAGTAACGTAATATCGCCAGCGCCAATCTGCACCTGACGCTCATCCTGCTCCATTATTGcc < 1:98305/100‑1 (MQ=255) aagaCTCCTGCCAGTAAAGCGAACA‑GGGCGTGAGGCATCGAGTAACGTAATATCGCCAGCGCCAATCTGCACCTGACGCTCATCCTGCTCCATTATTGcc < 1:2259207/100‑1 (MQ=255) agaCTCCTGCCAGTAAAGCGAACAGGGGCGTGAGGCATCGAGTAACGTAATATCGCCAGCGCCAATCTGCACCTGACGCTCATCCTGCTCCATTATTGcc < 2:2363202/100‑1 (MQ=255) gaCTCCTGCCAGTAAAGCGAACAGGGGCGTGAGGCATCGAGTAACGTAATATCGCCAGCGCCAATCTGCACCTGACGCTCATCCTGCTCCATTATTGCCt > 1:219844/1‑100 (MQ=255) aCTCCTGCCAGTAAAGCGAACA‑GGGCGTGAGGCATCGAGTAACGTAATATCGCCAGCGCCAATCTGCACCTGACGCTCATCCTGCTCCATTATTGCCTGa < 1:2337073/100‑1 (MQ=255) cTCCTGCCAGTAAAGCGAACA‑GGGCGTGAGGCATCGAGTAACGTAATATCGCCAGCGCCAATCTGCACCTGACGCTCATCCTGCTCCATTATTGCCt < 2:872794/97‑1 (MQ=255) cTCCTGCCAGTAAAGCGAACA‑GGGCGTGAGGCATCGAGTAACGTAATATCGCCAGCGCCAATCTGCACCTGACGCTCATCCTGCTCCATTATTGCCTGAc > 1:3377784/1‑100 (MQ=255) cTCCTGCCAGTAAAGCGAACA‑GGGCGTGAGGCATCGAGTAACGTAATATCGCCAGCGCCAATCTGCACCTGACGCTCATCCTGCTCCATTATTGCCTGAc > 1:9747/1‑100 (MQ=255) tCCTGCCAGTAAAGCGAACA‑GGGCGTGAGGCATCGAGTAACGTAATATCGCCAGCGCCAATCTGCACCTGACGCTCATCCTGCTCCATTATTGCCTGAcc < 2:41833/100‑1 (MQ=255) tCCTGCCAGTAAAGCGAACA‑GGGCCTGAGGCATCGAGGAACGTAATATCGCCAGCGTCATTCTGTACCTGACGCTCATCCTGCTCCATTATTGCCTGAcc < 2:188254/100‑1 (MQ=255) cTGCCAGTAAAGCGAACA‑GGGCGTGAGGCATCGAGTAACGTAATATCGCCAGCGCCAATCTGCACCTGACGCTCATCCTGCTCCATTATTGCCTGACCAc < 1:111402/100‑1 (MQ=255) gacAGGAAAGGGAACAGGGGCGTGAGGCGTCGAGTAACGGAATGACGGTAGCGCCAATCTGCACCTGACGCTCATCCTGCTCCATTATTGcc < 2:2698636/90‑1 (MQ=255) gCCAGTAAAGCGAACAGGGGCGTGAGGCATCGAGTAACGTAATATCGCCAGCGCCAATCTGCACCTGACGCTCATCCTGCTCCATTATTGCCTGACCACt < 1:726115/100‑1 (MQ=255) gCCAGTAAAGCGAACA‑GGGCGTGAGGCATCGAGTAACGTAATATCGCCAGCGCCAATCTGCACCTGACGCTCATCCTGCTCCATTATTGCCTGACCACTa > 1:2192456/1‑100 (MQ=255) gCCAGTAAAGCGAACA‑GGGCGTGAGGCATCGAGTAACGTAATATCGCCAGCGCCAATCTGCACCTGACGCTCATCCTGCTCCATTATTGCCTGACCACTa < 2:797741/100‑1 (MQ=255) cAGTAAAGCGAACAGGGGCGTGAGGCATCGAGTAACGTAATATCGCCAGCGCCAATCTGCACCTGACGCTCATCCTGCTCCATTATTGCCTGACCACTaa > 1:1026857/1‑100 (MQ=255) cAGTAAAGCGAACA‑GGGCGTGAGGCATCGAGTAACGTAATATCGCCAGCGCCAATCTGCACCTGACGCTCATCCTGCTCCATTATTGCCTGACCACTAAg > 1:633500/1‑100 (MQ=255) aaaGCGAACAGGGGCGTGAGGCATCGAGTAACGTAATATCGCCAGCGCCAATCTGCACCTGACGCTCATCCTGCTCCATTATTGCCTGACCCCTCAGCTg > 2:1675525/1‑100 (MQ=255) aaaGCGAACAGGGGCGTGAGGCATCGAGTAACGTAATATCGCCAGCGCCAAGCTGCACCTGACGCTCATCCTGCTCCATTATTGCCTGACAACTAAGCTg > 1:3717360/1‑100 (MQ=255) aaGCGAACAGGGGCGTGAGGCATCGAGTAACGTAATATCGCCAGCGCCAATCTGCACCTGACGCTCATCCTGCTCCATTATTGCCTGACCACTAAGCTGa < 2:782675/100‑1 (MQ=255) aaGCGAACA‑GGGCGTGAGGCATCGAGTAACGTAATATCGCCAGCGCCAATCTGCACCTGACGCTCATCCTGCTCCATTATTGCCTGACCACTAAGCTGaa < 2:2090605/100‑1 (MQ=255) cGAACA‑GGGCGTGAGGCATCGAGTAACGTAATATCGCCAGCGCCAATCTGCACCTGACGCTCATCCTGCTCCATTATTGCCTGACCACTAAGCTGaaaaa > 1:3890014/1‑100 (MQ=255) ggggCGTGAGGCATCGAGTAACGTAATATCGCCAGCGCCAATCTGCACCTGACGCTCATCCTGCTCCCTTATTGCCTGACCACTAAGCTGAAAAACGgtg > 1:1719210/1‑100 (MQ=255) | TGCGCAGATAGGTTTTTGATGGGGAAAATATTGTTCCAGCAGAGTGCGTGGCAAAAGTAATGAAATCTGTTTAGAAGACTCCTGCCAGTAAAGCGAACAGGGGCGTGAGGCATCGAGTAACGTAATATCGCCAGCGCCAATCTGCACCTGACGCTCATCCTGCTCCATTATTGCCTGACCACTAAGCTGAAAAACGGTG > NC_000913/1446870‑1447068 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |