Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_000913 1,609,555 Δ1 bp 16.0% coding (1126/1452 nt) uxaB ← altronate oxidoreductase, NAD‑dependent

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009131,609,5550G.16.0% 292.4 / 54.9 100coding (1126/1452 nt)uxaBaltronate oxidoreductase, NAD‑dependent
Reads supporting (aligned to +/- strand):  ref base G (44/40);  new base . (6/10);  total (50/50)
Fisher's exact test for biased strand distribution p-value = 4.14e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.04e-01

Only 100 of 120 total aligned reads displayed.

ATGTTTCGCCGTTACGCTCACCACGATAGAACGCAATCAATGCCGCTAATGCGAAAGTAAGGCGCGCCGGAAGTGTGCCGTTTGCCTTCTGCCCTGCCAGCAGCTG‑TGGCAGGATGCGGGTGCGGAACTTGGTCATACCGTTGAGCGCGATAGACAGCAGCTGATGCTTAATGTACGGGTTACGGAAACGCCCGGTGAC  >  NC_000913/1609456‑1609654
                                                                                                   |                                                                                                    
 tGTTTCGCCGTTACGCTCACCACGATAGCACGCAATCAATGCCGCTAATGCGAAAGTAAGGCGCGCCGGAAGTGTGCCGTTTGCCTTCTGCCCTGCcagc                                                                                                     <  2:3385978/100‑1 (MQ=255)
 tGTTTCGCCGTTACGCTCACCACGATAGAACGCAATCAATGCCGCTAATGCGAAAGTAAGGCGCGCCGGAAGTGTGCCGTTTGCCTTCTGCCCTGCcagc                                                                                                     <  2:1464293/100‑1 (MQ=255)
  gattCGCCGTTACGCTCACCACGATAGAACGAAATCAATGCCGCTAATGCGAAAGTAAGGCGCGCCGAAAGTGTGCCGTTTGCCTTCTGCCCTGCcagc                                                                                                     >  2:1422104/3‑99 (MQ=255)
  gTTTCGCCGTTACGCTCACCACGATAGAACGCAATCAATGCCGCTAATGCGAAAGTAAGGCGCGCCGGAAGTGTGCCGTTTGCCTTCTGCCCTGCcagca                                                                                                    <  2:1054233/100‑1 (MQ=255)
  gTTTCGCCGTTACGCTCACCACGATAGAACGCAATCAATGCCGCTAATGCGAAAGTAAGGCGCGCCGGAAGTGTGCCGTTTGCCTTCTGCCCTGCcagca                                                                                                    >  1:4092074/1‑100 (MQ=255)
  gTTTCGCCGTTACGCTCACCACGATAGAACGCAATCAATGCCGCTAATGCGAAAGTAAGGCGCGCCGGAAGTGTGCCGTTTGCCTTCTGCCCTGCcagca                                                                                                    >  2:1619666/1‑100 (MQ=255)
  gTTTCGCCGTTACGCTCACCACGATAGAACGCAATCAATGCCGCTAATGCGAAAGTAAGGCGCGCCGGAAGTGTGCCGTTTGCCTTCTGCCCTGCcagca                                                                                                    >  1:2978850/1‑100 (MQ=255)
  gTTTCGCCGTTACGCTCACCACGATAGAACGCAATCAATGCCGCTAATGCGAAAGTAAGGCGCGCCGGAAGTGTGCCGTTTGCCTTCTGCCCTGCcagca                                                                                                    >  1:1699246/1‑100 (MQ=255)
  gTTTCGCCGTTACGCTCACCACGATAGAACGCAATCAATGCCGCTAATGCGAAAGTAAGGCGCGCCGGAAGTGTGCCGTTTGCCTTCTGCCCTGCcagc                                                                                                     >  1:577947/1‑99 (MQ=255)
   tttCGCCGTTACGCTCACCACGATAGAACGCAATCAATGCCGCTAATGCGAAAGTAAGGCGCGCCGGAAGTGTGCCGTTTGCCTTCTGCCCTGCcagcag                                                                                                   >  1:4030636/1‑100 (MQ=255)
    ttCGCCGTTACGCTCACCACGATAGAACGCAATCAATGCCGCTAATGCGAAAGTAAGGCGCGCCGGAAGTGTGCCGTTTGCCTTCTGCCCTGCCagcagc                                                                                                  >  1:95781/1‑100 (MQ=255)
    ttCGCCGTTACGCTCACCACGATAGAACGCAATCAATGCCGCTAATGCGAAAGTAAGGCGCGCCGGAAGTGTGCCGTTTGCCTTCTGCCCTGCCagcagc                                                                                                  <  1:2058349/100‑1 (MQ=255)
    ttCGCCGTTACGCTCACCACGATAGAACGCAATCAATGCCGCTAATGCGAAAGTAAGGCGCGCCGGAAGTGTGCCGTTTGCCTTCTGCCCTGCCagcagc                                                                                                  >  2:1865311/1‑100 (MQ=255)
    ttCGCCGTTACGCTCACCACGATAGAACGCAATCAATGCCGCTAATGCGAAAGTAAGGCGCGCCGGAAGTGTGCCGTTTGCCTTCTGCCCTGCCagcagc                                                                                                  <  1:1291090/100‑1 (MQ=255)
    ttCGCCGTTACGCTCACCACGATAGAACGCAATCAATGCCGCTAATGCGAAAGTAAGGCGCGCCGGAAGTGTGCCGTTTGCCTTCTGCCCTGCCagcagc                                                                                                  >  1:3267267/1‑100 (MQ=255)
     tCGCCGTTACGCTCACCACGATAGAACGCAATCAATGCCGCTAATGCGAAAGTAAGGCGCGCCGGAAGTGTGCCGTTTGCCTTCTGCCCTGCCAGCAGCt                                                                                                 >  1:141591/1‑100 (MQ=255)
      cGCCGTTACGCGCACCACGATAGAACGCAATCAATGCCGCTAATGCGAAAGTAAGGCGCGCCGGACGTGTGCCGTTTGCCTTCTGCCCTGCCAGCAGCt                                                                                                 >  2:2167425/1‑99 (MQ=255)
        ccGTTACGCTCACCACGATAGAACGCAATCAATGCCGCTAATGCGAAAGTAAGGCGCGCCGGAAGTGTGCCGTTTGCCTTCTGCCCTGCCAGCAGCtg‑tg                                                                                             >  2:3963305/1‑100 (MQ=255)
        ccGTTACGCTCACCACGATAGAACGCAATCAATGCCGCTAATGCGAAAGTAAGGCGCGCCGGAAGTGTGCCGTTTGCCTTCTGCCCTGCCAGCAGCtg‑tg                                                                                             <  2:2579412/100‑1 (MQ=255)
            tACGCTCACCACGATAGAACGCAATCAATGCCGCTAATGCGAAAGTAAGGCGCGCCGGAAGTGTGCCGTTTGCCTTCTGCCCTGCCA‑CAGCTGCTGGCAg                                                                                         <  2:742734/100‑1 (MQ=255)
            tACGCTCACCACGATAGAACGCAATCAATGCCGCTAAGGCGAAAGTACGGCGCGCCGGAAGTGTGCCGTTTGCCTTCTGCCCTGCCAGCAGCTG‑TGGCAg                                                                                         <  2:2748077/100‑1 (MQ=255)
             aCGCTCACCACGATAGAACGCAATCAATGCCGCTAATGCGAAAGTAAGGCGCGCCGGAAGTGTGCCGTTTGCCTTCTGCCCTGCCA‑CAGCTGCTGGCAgg                                                                                        <  2:1551283/100‑1 (MQ=255)
              cGCTCACCACGATAGAACGCAATCAATGCCGCTAATGCGAAAGTAAGGCGCGCCGGAAGTGTGCCGTTTGCCTTCTGCCCTGCCAGCAGCTG‑TGGCAGGa                                                                                       <  1:2653402/100‑1 (MQ=255)
              cGCTCACCACGATAGAACGCAATCAATGCCGCTAATGCGAAAGTAAGGCGCGCCGGAAGTGTGCCGTTTGCCTTCTGCCCTGCCA‑CAGCTGCTGGCAggg                                                                                       <  2:1301002/100‑2 (MQ=255)
              cGCTCACCACGATAGAACGCAATCAATGCCGCTAATGCGAAAGTAAGGCGCGCCGGAAGTGTGCCGTTTGCCTTCTGCCCTGCCA‑CAGCTGCTGGCAggg                                                                                       <  1:2277647/100‑2 (MQ=255)
              cGCTCACCACGAGAGAACGCAATCAATGCCGCTAATGCGAAAGTAAGGCGCGCCGGAAGTGTGCCGTTTGCCTTCTGCCCTGCCA‑CAGCTGCTGGCAgg                                                                                        <  2:393550/99‑1 (MQ=255)
               gCTCACCACGATAGAACGCAATCAATGCCGCTAATGCGAAAGTAAGGCGCGCCGGAAGTGTGCCGTTTGCCTTCTGCCCTGCCA‑CAGCTGCTGGCAgggc                                                                                      <  1:2318444/100‑3 (MQ=255)
                cTCACCACGATAGAACGCAATCAATGCCGCTAATGCGAAAGTAAGGCGCGCCGGAAGTGTGCCGTTTGCCTTCTGCCCTGCCAGCAGCTG‑TGGCAGGATg                                                                                     >  1:1692133/1‑100 (MQ=255)
                cTCACCACGATAGAACGCAATCAATGCCGCTAATGCGAAAGTAAGGCGCGCCGGAAGTGTGCCGTTTGCCTTCTGCCCTGCCAGCAGCTG‑TGGCAGGATg                                                                                     >  1:2351499/1‑100 (MQ=255)
                cTCACCACGATAGAACGCAATCAATGCCGCTAATGCGAAAGTAAGGCGCGCCGGAAGTGTGCCGTTTGCCTTCTGCCCTGCCA‑CAGCTGCTGGCAgggca                                                                                     <  1:3106828/100‑4 (MQ=255)
                    ccacGATAGAACGCAATCAATGCCGCTAATGCGAAAGTAAGGCGCGCCGGAAGTGTGCCGTTTGCCTTCTGCCCTGCCAGCAGCTG‑TGGCAGGATGCggg                                                                                 >  1:1321742/1‑100 (MQ=255)
                    ccacGATAGAACGCAATCAATGCCGCTAATGCGAAAGTAAGGCGCGCCGGAAGTGTGCCGTTTGCCTTCTGCCCTGCCAGCAGCTG‑TGGCAGGATGCggg                                                                                 <  1:300370/100‑1 (MQ=255)
                    ccacGATAGAACGCAATCAATGCCGCTAATGCGAAAGTAAGGCGCGCCGGAAGTGTGCCGTTTGCCTTCTGCCCTGCCAGCAGCTG‑TGGCAGGATCCggg                                                                                 <  1:2569958/100‑1 (MQ=255)
                     cacGATAGAACGCAATCAATGCCGCTAATGCGAAAGTAAGGCGCGCCGGAAGTGTGCCGTTTGCCTTCTGCCCTGCCA‑CAGCTGCTGGCAgggcagaagg                                                                                <  1:1493493/100‑9 (MQ=38)
                      acGATAGAACGCAATCAATGCCGCTAATGCGAAAGTAAGGCGCGCCGGAAGTGTGCCGTTTGCCTTCTGCCCTGCCAGCAGCTG‑TGGCAGGATGCGGGt                                                                                >  2:1779315/1‑99 (MQ=255)
                       cGATAGAACGCAATAAATGCCGCTAATGCGAAAGTAAGGCGCGCCGGAAGTGTGTCGTTTGCCTTCTGCACTGCCAGCAGCTG‑TGGCAGGATGCGGGTg                                                                               >  1:1076375/1‑99 (MQ=255)
                        gATAGAACGCAATCAATGCCGCTAATGCGAAAGTAAGGCGCGCCGGAAGTGTGCCGTTTGCCTTCTGCCCTGCCAGCAGCTG‑TGGCAGGATGCGGGTGCg                                                                             <  2:550555/100‑1 (MQ=255)
                              aCGCAATCAATGCCGCTAATGCGAAAGTAAGGCGCGCCGGAAGTGTGCCGTTTGCCTTCTGCCCTGCCAGCAGCTG‑TGGCAGGATGCGGGTGCGGAACtt                                                                       >  1:4049756/1‑100 (MQ=255)
                               cGCAATCAATGCCGCTAATGCGAAAGTAAGGCGCGCCGGAAGTGTGCCGTTTGCCTTCTGCCCTGCCAGCAGCTG‑TGGCAGGATGCGGGTGCGGAACTTg                                                                      >  2:1387996/1‑100 (MQ=255)
                                gCAATCAATGCCGCTAATGCGAAAGTAAGGCGCGCCGGAAGTGTGCCGTTTGCCTTCTGCCCTGCCAGCAGCTG‑TGGCAGGATGCGGGTGCGGAACTTgg                                                                     <  1:2412609/100‑1 (MQ=255)
                                gCAATCAATGCCGCTAATGCGAAAGTAAGGCGCGCCGGAAGTGTGCCGTTTGCCTTCTGCCCTGCCAGCAGCTG‑TGGCAGGATGCGGGTGCGGAACTTgg                                                                     <  1:3953642/100‑1 (MQ=255)
                                 caatcaatGCCGCTAATGCGAAAGTAAGGCGCGCCGGAAGTGTGCCGTTTGCCTTCTGCCCTGCCAGCAGCTG‑TGGCAGGATGCGGGTGCGGAACTTGGt                                                                    >  2:2551418/1‑100 (MQ=255)
                                 caatcaatGCCGCTAATGCGAAAGTAAGGCGCGCCGGAAGTGTGCCGTTTGCCTTCTGCCCTGCCAGCAGCTG‑TGGCAGGATGCGGGTGCGGAACTTGGt                                                                    <  1:3038847/100‑1 (MQ=255)
                                   atcaatGCCGCTAATGCGAAAGTAAGGCGCGCCGGAAGTGTGCCGTTTGCCTTCTGCCCTGCCAGCAGCTG‑TGGCAGGATGCGGGTGCGGAACTTGGTCa                                                                  <  2:181821/100‑1 (MQ=255)
                                   atcaatGCCGCTAATGCCAAAGTAAGGCGCGCCGGAAGTGTGCCGTTTGCCTTCTGCCCTGCCAGCAGCTG‑TGGCAGGATGCGGGTGCGGAACTTGGt                                                                    <  2:1947953/98‑1 (MQ=255)
                                    tcaatGCCGCTAATGCGAAAGTAAGGAGCGACGGAAGTGTGCCGTTTGCCTTCTGCCCTGCCAGCAGCTG‑TGGCAGGATGCGGGTGCGGAACTTGGTCAt                                                                 >  2:160847/1‑100 (MQ=255)
                                      aatGCCGCTAATGCGAAAGTAAGGCGCGCCGGAAGTGTGCCGTTTGCCTTCTGCCCTGCCAGCAGCTG‑TGGCAGGATGCGGGTGCGGAACTTGGTCATAc                                                               >  1:3688516/1‑100 (MQ=255)
                                      aatGCCGCTAATGCGAAAGTAAGGCGCGCCGGAAGTGTGCCGTTTGCCTTCTGCCCTGCCAGCAGCTG‑TGGCAGGATGCGGGTGCGGAACTTGGTCATAc                                                               <  2:3517282/100‑1 (MQ=255)
                                           ngCTAATGCGAAAGTAAGGCGCGCCGGACGTGTGCCGTTTGCCTTCTGCCCTGCCAGCAGCTG‑TGGCAGGATGCGGGTGCGGAACTTGGTCATAGCGTTg                                                          >  2:1520437/2‑100 (MQ=255)
                                           cGCTAATGCGAAAGTAAGGCGCGCCGGAAGTGTGCCGTTTGCCTTCTGCCCTGCCAGCAGCTG‑TGGCAGGATGCGGGTGCGGAACTTGGTCATACCGTTg                                                          <  1:725087/100‑1 (MQ=255)
                                              tAATGCGAAAGTAAGGCGCGCCGGAAGTGTGCCGTTTGCCTTCTGCCCTGCCAGCAGCTG‑TGGCAGGATGCGGGTGCGGAACTTGGTCATACCGTTGAgc                                                       <  2:2337734/100‑1 (MQ=255)
                                                   cGAAAGTAAGGCGCGCCGGAAGTGTGCCGTTTGCCTTCTGCCCTGCCAGCAGCTG‑TGGCAGGATGCGGGTGCGGAACTTGGTCATACCGTTGAGCGCGAt                                                  >  2:818918/1‑100 (MQ=255)
                                                   cGAAAGTAAGGCGCGCCGGAAGTGTGCCGTTTGCCTTCTGCCCTGCCAGCAGCTG‑TGGCAGGATGCGGGTGCGGAACTTGGTCATACCGTTGAGCGCGAt                                                  >  1:38329/1‑100 (MQ=255)
                                                   cGAAAGTAAGGCGCGCCGGAAGTGTGCCGTTTGCCTTCTGCCCTGCCAGCAGCTG‑TGGCAGGATGCGGGTGCGGAACTTGGTCATACCGTTGAGCGCGAt                                                  <  1:1374515/100‑1 (MQ=255)
                                                     aaaGTAAGGCGCGCCGGAAGTGTGCCGTTTGCCTTCTGCCCTGCCAGCAGCTG‑TGGCAGGATGCGGGTGCGGAACTTGGTCATACCGTTGAGCGCGATAg                                                <  2:135702/100‑1 (MQ=255)
                                                      aaGTAAGGCGCGCCGGAAGTGTGCCGTTTGCCTTTTGCTCTGCCAGCAGCTG‑TGGCAGGATGCGGGTGCGGAACTTGGTCATACCGTTGAGCGCGAt                                                  >  2:1619498/1‑97 (MQ=255)
                                                      aaGTAAGGCGCGCCGGAAGTGTGCCGTTTGCCTTCTGCCCTGCCAGCAGCTG‑TGGCAGGATGCGGGTGCGGAACTTGGTCATACCGTTGAGCGCGATAGa                                               >  2:3625595/1‑100 (MQ=255)
                                                        gTAAGGCGCGCCGGAAGTGTGCCGTTTGCCTTCTGCCCTGCCAGCAGCTG‑TGGCAGGATGCGGGTGCGGAACTTGGTCATACCGTTGAGCGCGATAGAca                                             <  2:3267247/100‑1 (MQ=255)
                                                          aaGGCGCGCCGGAAGTGTGCCGTTTGCCTTCTGCCCTGCCAGCAGCTG‑TGGCAGGATGCGGGTGCGGAACTTGGTCATACCGTTGAGCGCGATAGAcagc                                           <  1:451299/100‑1 (MQ=255)
                                                           aGGCGCGCCGGAAGTGTGCCGTTTGCCTTCTGCCCTGCCAGCAGCTG‑TGGCAGGATGCGGGTGCGGAACTTGGTCATACCGTTGAGCGCGATAGAcagca                                          >  1:2665775/1‑100 (MQ=255)
                                                            ggCGCGCCGGAAGTGTGCCGTTTGCCTTCTGCCCTGCCAGCAGCTG‑TGGCAGGATGCGGGTGCGGAACTTGGTCATACCGTTGAGCGCGATAGAcagcag                                         <  1:344749/100‑1 (MQ=255)
                                                             gcgcgcCGGAAGTGTGCCGTTTGCCTTCTGCCCTGCCAGCAGCTG‑TGGCAGGATGCGGGTGCGGAACTTGGTCATACCGTTGAGCGCGATAGACagcagc                                        <  2:3114285/100‑1 (MQ=255)
                                                              cgcgcCGGAAGTGTGCCGTTTGCCTTCTGCCCTGCCAGCAGCTG‑TGGCAGGATGCGGGTGCGGAACTTGGTCATACCGTTGAGCGCGCTAGACAGCAGCt                                       >  1:2890968/1‑100 (MQ=255)
                                                                cgcCGGAAGTGTGCCGTTTGCCTTCTGCCCTGCCAGCAGCTG‑TGGCAGGATGCGGGTGCGGAACTTGGTCATACCGTTGAGCGCGATAGACAGCAGCTGa                                     >  1:1631799/1‑100 (MQ=255)
                                                                 gcCGGAAGTGTGCCGTTTGCCTTCTGCCCTGCCAGCACCTG‑TGGCAGGATGCGGGTGCGGAACTTGGTCATACCGTTGAGCGCGATAGACAGCAGCTGAt                                    <  2:2784636/100‑1 (MQ=255)
                                                                 gcCGGAAGTGTGCCGTTTGCCGTCTGCCCTGCCAGCAGCTG‑TGGCAGGATGCGGGTGCGGAACTTGGTCATACCGTTGAGCGCGATAGACAGCAGCTGAt                                    <  2:2784622/100‑1 (MQ=255)
                                                                  ccGGAAGTGTGCCGTTTGCCTTCTGCCCTGCCAGCAGCTG‑TGGCAGGATGCGGGTGCGGAACTTGGTCATACCGTTGAGCGCGATAGACAGCAGCTGATg                                   <  1:1520449/100‑1 (MQ=255)
                                                                     gAAGTGTGCCGTTTGCCTTCTGCCCTGCCAGCAGCTG‑TGGCAGGATGCGGGTGCGGAACTTGGTCATACCGTTGAGCGCGATAGACAGCAGCTGATGCtt                                >  2:2684855/1‑100 (MQ=255)
                                                                       aGTGTGCCGTTTGCCTTCTGCCCTGCCAGCAGCTG‑TGGCAGGATGCGGGTGCGGAACTTGGTCATACCGTTGAGCGCGATAGACAGCAGCTGATGCTTaa                              <  2:38329/100‑1 (MQ=255)
                                                                        gtgtGCCGTTTGCCTTCTGCCCTGCCAGCAGCTG‑TGGCAGGATGCGGGTGCGGAACTTGGTCATACCGTTGAGCGCGATAGACAGCAGCTGATGCTTAAt                             <  1:544869/100‑1 (MQ=255)
                                                                        gtgtGCCGGTTGCCTCCTCCCCTGCCAGCAGCTG‑TGTCAGGATGCGGGTGCGGAATTTGGTCATACCGTTGAGCGCGCTAGACAGCAGCTGATGCtt                                <  2:3356873/97‑1 (MQ=255)
                                                                          gtgCCGTTTGCCTTCTGCCCTGCCAGCAGCTG‑TGGCAGGATGCGGGTGCGGAACTTGGTCATACCGTTGAGCGCGATAGACAGCAGCTGATGCTTAATGt                           >  1:3094686/1‑100 (MQ=255)
                                                                          gtgCCGTTTGCCTTCTGCCCTGCCAGCAGCTG‑TGGCAGGATGCGGGTGCGGAACTTGGTCATACCGTTGAGCGCGATAGACAGCAGCTGATGCTTAATGt                           >  1:1191458/1‑100 (MQ=255)
                                                                           tgCCGTTTGCCTTCTGCTCTGCCAGCAGCTG‑TGGCAGGATGCGGGTGCGGAACTTGGTCATACCGTTGAGCGCGATAGACAGCAGCTGATGCTTAATGTa                          >  2:1897652/1‑100 (MQ=255)
                                                                            gCCGTTTGCCTTCTGCCCTGCCAGCAGCTG‑TGGCAGGATGCGGGTGCGGAACTTGGTCATACCGTTGAGCGCGATAGACAGCAGCTGATGCTTAATGTAc                         >  1:2569322/1‑100 (MQ=255)
                                                                             ccGTTTGCCTTCTGCCCTGCCAGCAGCTG‑TGGCAGGATGCGGGTGCGGAACTTGGTCATACCGTTGAGCGCGATAGACAGCAGCTGATGCTTAATGTACg                        <  1:3396202/100‑1 (MQ=255)
                                                                               gtgtGCCGTCTGCCCTGCCAGCAGCTC‑TGGCAGGATGCGGGCGCGGAACTTTGTCATACCGTTGAGCGCGATAGACAGCAGCTGATGCTTAATGTa                          <  2:3714312/93‑1 (MQ=255)
                                                                                tttGCCTTCTGCCCTGCCAGCAGCTG‑TGGCAGGATGCGGGTGCGGAACTTGGTCATACCGTTGAGCGCGATAGACAGCAGCTGATGCTTAATGTACGGGt                     <  1:2551432/100‑1 (MQ=255)
                                                                                    tctcgcatcctgccA‑CAGCTGCTGGCAGGATGCGGGTGCGGAACTTGGTCATACCGTTGAGCGCGATAGACAGCAGCTGATGCTTAATGTACGGGTTACg                 <  1:678257/92‑1 (MQ=38)
                                                                                    ccTTCTGCCCTGCCAGCAGCTG‑TGGCAGGATGCGGGTGCGGAACTTGGTCATACCGTTGAGCGCGATAGACAGCAGCTGATGCTTAATGTACGGGTTACg                 <  1:672556/100‑1 (MQ=255)
                                                                                    ccTTCTGCCCTGCCAGCAGCTG‑TGGCAGGATGCGGGTGCGGAACTTGGTCATACCGTTGAGCGCGATAGACAGCAGCTGATGCTTAATGTACGGGTTACg                 <  1:953231/100‑1 (MQ=255)
                                                                                     cTTCTGCCCTGCCAGCAGCTG‑TGGCAGGATGCGGGTGCGGAACTTGGTCATACCGTTGAGCGCGATAGACAGCAGCTGATGCTTAATGTACGGGTTACgg                >  1:618156/1‑100 (MQ=255)
                                                                                     cTTCTGCCCTGCCAGCAGCTG‑TGGCAGGATGCGGGTGCGGAACTTGGTCATACCGTTGAGCGCGATAGACAGCAGCTGATGCTTAATGTACGGGTTACg                 <  2:2514600/99‑1 (MQ=255)
                                                                                       cgcatcctgccA‑CAGCTGCTGGCAGGATGCGGGTGCGGAACTTGGTCATACCGTTGAGCGCGATAGACAGCAGCTGATGCTTAATGTACGGGTTACgaga              >  2:678251/6‑97 (MQ=38)
                                                                                       cgcatcctgccA‑CAGCTGCTGGCAGGATGCGGGTGCGGAACTTGGTCATACCGTTGAGCGCGATAGACAGCAGCTGATGCTTAATGTACGGGTTACGGaa              >  2:1909692/6‑100 (MQ=38)
                                                                                       cgcatcctgccA‑CAGCTGCTGGCAGGATGCGGGTGCGGAACTTGGTCATACCGTTGAGCGCGATAGACAGCAGCTGATGCTTAATGTACGGGTTACGGaa              >  1:262925/6‑100 (MQ=38)
                                                                                        ctgccctgccAGCAGCTG‑TGGCAGGATGCGGGTGCGGAACTTGGTCATACCGTTGAGCGCGATAGACAGCAGCTGATGCTTAATGTACGGGTTACGGaaa             >  1:722554/1‑100 (MQ=255)
                                                                                         catcctgccA‑CAGCTGCTGGCAGGATGCGGGTGCGGAACTTGGTCATACCGTTGAGCGCGATAGACAGCAGCTGATGCTTAATGTACGGGTTACGGAAAc            >  2:1595824/4‑100 (MQ=255)
                                                                                          gccctgccAGCAGCTG‑TGGCAGGATGCGGGTGCGGAACTTGGTCATACCGTTGAGCGCGATAGACAGTAGCTGATGCTTAATGTACGGGTTACGGAAACg           <  1:3922202/100‑1 (MQ=255)
                                                                                          gccctgccAGCAGCTG‑TGGCAGGATGCGGGTGCGGAACTTGGTCATACCGTTGAGCGCGATAGACAGCAGCTGATGCTTAATGTACGGGTTACGGAACCg           >  2:3341606/1‑100 (MQ=255)
                                                                                          gccctgccAGCAGCTG‑TGGCAGGATGCGGGTGCGGAACTTGGTCATACCGTTGAGCGCGATAGACAGCAGCTGATGCTTAATGTACGGGTTACGGAAACg           >  1:1200710/1‑100 (MQ=255)
                                                                                          gccctgccAGCAGCTG‑TGGCAGGATGCGGGTGCGGAACTTGGTCATACCGTTGAGCGCGATAGACAGCAGCTGATGCTTAATGTACGGGTTACGGAAACg           >  2:1222552/1‑100 (MQ=255)
                                                                                          atcctgccA‑CAGCTGCTGGCAGGATGCGGGTGCGGAACTTGGTCATACCGTTGAGCGCGATCGACAGCAGCTGATGCTTAATGTACGGGTTACGGAAACg           >  1:1061714/3‑100 (MQ=255)
                                                                                            cctgccAGCAGCTG‑TGGCAGGATGCGGGTGCGGAACTTGGTCATACCGTTGAGCGCGATAGACAGCAGCTGATGCTTAATGTACGGGTTACGGAAACGcc         >  1:1893485/1‑100 (MQ=255)
                                                                                            cctgccAGCAGCTG‑TGGCAGGATGCGGGTGCGGAACTTGGTCATACCGTTGAGCGCGATAGACAGCAGCTGATGCTTAATGTACGGGTTACGGAAACGcc         >  1:2538578/1‑100 (MQ=255)
                                                                                               gccAGCAGCTG‑TGGCAGGATGCGGGTGCGGAACTTGGTCATACCGTTGAGCGCGATAGACAGCAGCTGATGCTTAATGTACGGGTTACGGAAACGccc        >  2:493689/1‑98 (MQ=255)
                                                                                               gccAGCAGCTG‑TGGCAGGATGCGGGTGCGGAACTTGGTCATACCGTTGAGCGCGATAGACAGCAGCTGATGCTTAATGTACGGGTTACGGAAACGCCCgg      <  1:1865324/100‑1 (MQ=255)
                                                                                               gccAGCAGCTG‑TGGCAGGATGCGGGTGCGGAACTTGGTCATACCGTTGAGCGCGATAGACAGCAGCTGATGCTTAATGTACGGGTTACGGAAACGCCCgg      <  1:2678556/100‑1 (MQ=255)
                                                                                                  agcagcTG‑TGGCAGGATGCGGGTGCGGAACTTGGTCATACCGTTGAGCGCGATAGACAGCAGCTGATGCTTAATGTACGGGTTACGGAAACGCCCGGTGa   >  2:1907172/1‑100 (MQ=255)
                                                                                                   gcagcTG‑TGGCAGGATGCGGGTGCGGAACTTGGTCATACCGTTGAGCGCGATAGACAGCAGCTGATGCTTAATGTACGGGTTACGGAAACGCCCGGTGAc  <  2:2616630/100‑1 (MQ=255)
                                                                                                   |                                                                                                    
ATGTTTCGCCGTTACGCTCACCACGATAGAACGCAATCAATGCCGCTAATGCGAAAGTAAGGCGCGCCGGAAGTGTGCCGTTTGCCTTCTGCCCTGCCAGCAGCTG‑TGGCAGGATGCGGGTGCGGAACTTGGTCATACCGTTGAGCGCGATAGACAGCAGCTGATGCTTAATGTACGGGTTACGGAAACGCCCGGTGAC  >  NC_000913/1609456‑1609654

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑