| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 1,785,283 | Δ1 bp | 100% | coding (1830/2379 nt) | ppsA ← | phosphoenolpyruvate synthase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,785,281 | 0 | C | . | 67.0% | 128.9 / 152.6 | 97 | coding (1832/2379 nt) | ppsA | phosphoenolpyruvate synthase |
| Reads supporting (aligned to +/- strand): ref base C (15/17); new base . (29/36); total (44/53) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.52e-01 | |||||||||||
ATCTCAACGTTGGTCAGTCCCATGTCGTTGCGCACACGTTTCACTGCTTCACACTCCAGCGCGAAACAGTCGCGGAAGCTGTCGGAAACATAGCGGCCCGCGCCACGGAAGCCGAGCATCGGGTTCTCTTCATCTGGCTCGTAACGCTCACCACCGACCAGGTTGGCATATTCGTTCGATTTAAAATCAGAGAGAC > NC_000913/1785185‑1785380 | aTCTCAACGTTGGTCAGTCCCATGTCGTTGCGCACACGTTTCACTGCTTCACACTCCAGCGCGAAACAGTCGCGGAAGCTGTCGGAAACATAGCGGccgc > 2:3672058/1‑98 (MQ=255)aTCTCAACGTTGGTCAGTCCCATGTCGTTGCGCACACGTTTCACTGCTTCACACTCCAGCGCGAAACAGTCGCGGAAGCTGTCGGAAACATAGCGGCCcg > 1:3525948/1‑100 (MQ=255) ctcAACGTTGGTCAGTCCCATGTCGTTGCGCACACGTTTCACTGCTTCACACTCCAGCGCGAAACAGTCGCGGAAGCTGTCGGAAACATAGCGGccgcgc > 2:3070649/1‑96 (MQ=255) tcAACGTTGGTCAGTCCCATGTCGTTGCGCACACGTTTCACTGCTTCACACTCCAGCGCGAAACAGTCGCGGAAGCTGTCGGAAACATAGCGG‑CCGCGcc > 2:1232396/1‑100 (MQ=255) aCGTTGGTCAGTCCCATGTCGTTGCGCACACGTTTGACTGCTTCACACTCCAGCGCGAAACAGGCGCGGAAGCTGTCGGAAACATAGCGGCCCGCGCCAc < 2:2593046/100‑1 (MQ=255) aCGTTGGTCAGTCCCATGTCGTTGCGCACACGTTTCACTGCTTCACACTCCAGCGCGAAACAGACGCGGAAGCTGTCGGAAACATAGCGG‑CCGCGCCACg > 1:3937309/1‑100 (MQ=255) tGGTCAGTCCCATGTCGTTGCGCACACGTTTCACTGCTTCACACTCCAGCGCGAAACAGTCGCGGAAGCTGTCGGAAACATAGCGG‑CCGCGCCACGGAAg < 1:2712109/100‑1 (MQ=255) ggTCAGTCCCATGTCGTTGCGCACACGTTTCACTGCTTCACACTCCAGCGCGAAACAGTCGCGGAAGCTGTCGGAAACATAGCGG‑CCGCGCCACGGAAGc > 1:4054354/1‑100 (MQ=255) ggTCAGTCCCATGTCGTTGCGCACACGTTTCACTGCTTCACACTCCAGCGCGAAACAGTCGCGGAAGCTGTCGGAAACATAGCGG‑CCGCGCCACGGAAGc > 1:2845731/1‑100 (MQ=255) gTCAGTCCCATGTCGTTGCGCACACGTTTCACTGCTTCACACTCCAGCGCGAAACAGTCGCGGAAGCTGTCGGAAACATAGCGG‑CCGCGCCACGGAAGcc > 1:3107187/1‑100 (MQ=255) gTCAGTCCCATGTCGTTGCGCACACGTTTCACTGCTTCACACTCCAGCGCGAAACAGTCGCGGAAGCTGTCGGAAACATAGCGG‑CCGCGCCACGGAAGcc > 1:2197493/1‑100 (MQ=255) gTCAGTCCCATGTCGTTGCGCACACGTTTCACTGCTTCACACTCCAGCGCGAAACAGTCGCGGAAGCTGTCGGAAACATAGCGG‑CCGCGCCACGGAAGcc > 1:1658561/1‑100 (MQ=255) tCAGTCCCATGTCGTTGCGCACACGTTTCACTGCTTCACACTCCAGCGCGAAACAGTCGCGGAAGCTGTCGGAAACATAGCGGCCCGCGCCACGGAAGcc > 1:2343663/1‑100 (MQ=255) cccATGTCGTTGCGCACACGTTTCACTGCTTCACACTCCAGCGCGAAACAGTCGCGGAAGCTGTCGGAAACATAGCGACCCGCGCCACGGAAGCCGAGCa > 1:2226834/1‑100 (MQ=255) ccATGTCGTTGCGCACACGTTTCACTGCTTCACACTCCAGCGCGAAACAGTCGCGGAAGCTGTCGGAAACATAGCGGCCCGCGCCACGGAAGCCGAGCAt < 1:3794187/100‑1 (MQ=255) cATGTCGTTGCGCACACGTTTCACTGCTTCACACTCCAGCGCGAAACAGTCGCGGAAGCTGTCGGAAACATAGCGGCCCGCGCCACGGAAGCCGAGCATc < 1:3164239/100‑1 (MQ=255) aTGTCGTTGCGCACACGTTTCACTGCTTCACACTCCAGCGCGAAACAGTCGCGGAAGCTGTCGGAAACATAGCGGCCCGCGCCACGGAAGCCGAGCATCg < 2:2764963/100‑1 (MQ=255) aTGTCGTTGCGCACACGTTTCACTGCTTCACACTCCAGCGCGAAACAGTCGCGGAAGCTGTCGGAAACATAGCGG‑CCGCGCCACGGAAGCCGAGCATCgg < 1:3120934/100‑1 (MQ=255) tGTCGTTGCGCACACGTTTCACTGCTTCACACTCCAGCGCGAAACAGTCGCGGAAGCTGTCGGAAACATAGCGG‑CCGCGCCACGGAAGCCGAGCATCggg < 2:2724978/100‑1 (MQ=255) tGTCGTTGCGCACACGTTTCACTGCTTCACACTCCAGCGCGAAACAGTCGCGGAAGCTGTCGGAAACATAGCGG‑CCGCGCCACGGAAGCCGAGCATCggg < 1:1981846/100‑1 (MQ=255) gTCGTTGCGCACACGTTTCACTGCTTCACACTCCAGCGCGAAACAGTCGCGGAAGCTGTCGGAAACATAGCGGCCCGCGCCACGGAAGCCGAGCATCggg < 2:616126/100‑1 (MQ=255) gTCGTTGCGCACACGTTTCACTGCTTCACACTCCAGCGCGAAACAGTCGCGGAAGCTGTCGGAAACATAGCGG‑CCGCGCCACGGAAGCCGAGCATCGGGt < 2:2149638/100‑1 (MQ=255) gTCGTTGCGCACACGTTTCACTGCTTCACACTCCAGCGCGAAACAGTCGCGGAAGCTGTCGGAAACATAGCGG‑ACGCGCCACGGAAGCCGAGCATCggg > 2:4051769/1‑99 (MQ=255) tCGTTGCGCACACGTTTCACTGCTTCACACTCCAGCGCGAAACAGTCGCGGAAGCTGTCGGAAACATAGCGG‑CCGCGCCACGGAAGCCGAGCATCGGGtt < 1:2181645/100‑1 (MQ=255) tCGGTGCGCACACGTTTCACTGCTTCACACTCCAGCGCGAAACAGTCGCGGAAGCTGTCGGAAACATAGCGGCCCGCGCCACGGAAGCCGAGCATCGGGt < 2:51494/100‑1 (MQ=255) gcgcACACGTTTCACTGCTTCACACTCCAGCGCGAAACAGTCGCGGAAGCTGTCGGAAACATAGCGG‑CCGCGCCACGGAAGCCGAGCATCGGGTTCTCtt > 2:2320103/1‑100 (MQ=255) cacaCGTTTCACTGCTTCACACTCCAGCGCGAAACAGTCGCGGAAGCTGTCGGAAACATAGCGGCCCGCGCCACGGAAGCCGAGCATCGGGTTCTCTTCa > 2:889052/1‑100 (MQ=255) cacaCGTTTCACTGCTTCACACTCCAGCGCGAAACAGTCGCGGAAGCTGTCGGAAACATAGCGGCCCGCGCCACGGAAGCCGAGCATCGGGTTCTCTTCa > 1:3100940/1‑100 (MQ=255) cacaCGTTTCACTGCTTCACACTCCAGCGCGAAACAGTCGCGGAAGCTGTCGGAAACATAGCGG‑CCGCGCCACGGAAGCCGAGCATCGGGTTCTCTTCAt > 1:2508545/1‑100 (MQ=255) cacGTTTCACTGCTTCACACTCCAGCGCGAAACAGTCGCGGAAGCTGTCGGAAACATAGCGGCCCGCGCCACGGAAGCCGAGCATCGGGTTCTCTTc > 1:1548531/1‑97 (MQ=255) cacGTTTCACTGCTTCACACTCCAGCGCGAAACAGTCGCGGAAGCTGTCGGAAACATAGCGGCCCGCGCCACGGAAGCCGAGCATCGGGTTCTCTTCATc > 1:3554862/1‑100 (MQ=255) cGTTTCACTGCTTCACACTCCAGCGCGAAACAGTCGCGGAAGCTGTCGGAAACATAGCGG‑CCGCGCCACGGAAGCCGAGCATCGGGTTCTCTTCATCTgg > 1:1698288/1‑100 (MQ=255) gTTTCCCTGCTTCACACCCCAGCGCGAAACAGTCGCGGAAGCTGTCGGAAACATAGCGG‑CCGCGCCACGGAAGCCGAGCATCGGGTTCTCTTCATCTGGc < 2:3633290/100‑1 (MQ=255) tttCACTGCTTCACACTCCAGCGCGAAACAGTCGCGGAAGCTGTCGGACACATAGCGG‑CCGCGCCACGGAAGCCGAGCATCGGGTTCTCTGCATCTCGc > 2:68125/1‑99 (MQ=255) tttCACTGCTTCACACTCCAGCGCGAAACAGTCGCGGAAGCTGTCGGAAACATAGCGG‑CCGCGCCACGGAAGCCGAGCATCGGGTTCTCTTCATCTGGCt < 1:593759/100‑1 (MQ=255) ttCACTGCTTCACACTCCAGCGCGAAACAGTCGCGGAAGCTGTCGGAAACATAGCGGCCCGCGCCACGGAAGCCGAGCATCGGGTTCTCTTCATCTGGCt < 1:3178249/100‑1 (MQ=255) tccACTGCTTCACACTCCAGCGCGAAACAGTCGCGGAAGCTGTCGGAAACATAGCGG‑CCGCGCCACGGAAGCCGAGCATCGGGTTCTCTTCATCTGGCTc < 2:2508531/98‑1 (MQ=255) tCACTGCTTCACACTCCAGCGCGAAACAGTCGCGGAAGCTGTCGGAAACATAGCGG‑CCGCGCCACGGAAGCCGAGCATCGGGTTCTCTTCATCTGGCTCg > 1:2276356/1‑100 (MQ=255) cACTGCTTCACACTCCAGCGCGAAACAGTCGCGGAAGCTGTCGGAAACATAGCGGCCCGCGCCACGGAAGCCGAGCATCGGGTTCTCTTCATCTGGCTCg > 2:3751028/1‑100 (MQ=255) cACTGCTTCACACTCCAGCGCGAAACAGTCGCGGAAGCTGTCGGAAACATAGCGG‑CCGCGCCACGTAAGCCGAGCATCGGGTTCTCTTCATCTGGCTCGt > 1:311895/1‑100 (MQ=255) tGCTTCACACTCCAGCGCGAAACAGTCGCGGAAGCTGTCGGAAACATAGCGG‑CCGCGCCACGGAAGCCGAGCATCGGGTTCTCTTCATCTGGCTCGTAAc < 1:3606324/100‑1 (MQ=255) tGCTTCACACTCCAGCGCGAAACAGTCGCGGAAGCTGTCGGAAACATAGCGG‑CCGCGCCACGGAAGCCGAGCATCGGGTTCTCTTCATCTGGCTCGTAAc < 2:1049188/100‑1 (MQ=255) tGCTTCACACTCCAGCGCGAAACAGTCGCGGAAGCTGTCGGAAACATAGCGG‑CCGCGCCACGGAAGCCGAGCATCGGGTTCTCTTCATCTGGCTCGTAAc > 1:1037489/1‑100 (MQ=255) gCTTCACACTCCAGCGCGAAACAGTCGCGGAAGCTGTCGGAAACATAGCGGCCCGCGCCACGGAAGCCGAGCATCGGGTTCTCTTCATCTGGCTCGTAAc > 1:2885259/1‑100 (MQ=255) gCTTCACACTCCAGAGCGAAACAGTCGCGGAAGCTGTCGGAAACATAGCGG‑CCGCGCCACGGAAGACGAGCATCGGGTTCTCTTCATCTGGCTCGTaa > 2:3499689/1‑98 (MQ=255) acTTCACACTCCAGCGCGAAACAGTCGCGGAAGCTGTCGGAAACATAGCGG‑CCGCGGCACGGAAGCCGAGCATCGGGTTCTCTTCATCTGGCTCGTAAc > 2:2914153/2‑99 (MQ=255) cTTCACATTCCAGCGCGAAACAGTCGCGGAAGCTGTCGGAAACATAGCTG‑CCGCGCCACGGAAGCCGAGCATCGGGTTCTCTTCATCTGGCTCGTAACGc < 2:3607429/100‑1 (MQ=255) cacaCTCCAGCGCGAAACAGTCGCGGAAGCTGTCGGAAACATAGCGGCCCGCGCCACGGAAGCCGAGCATCGGGTTCTCTTCATCTGGCTCGTAACGCTc < 2:163685/100‑1 (MQ=255) cacaCTCCAGCGCGAAACAGTCGCGGAAGCTGTCGGAAACATAGCGG‑CCGCGCCACGGAAGCCGAGCATCGGGTTCTCTTCATCTGGCTCGTAACGCTca > 2:208183/1‑100 (MQ=255) cacaCTCCAGCGCGAAACAGTCGCGGAAGCTGTCGGAAACATAGCGG‑CCGCGCCACGGAAGCCGAGCATCGGGTTCTCTTCATCTGGCTCGTAACGCTca < 1:1531916/100‑1 (MQ=255) cacaCTCCAGCGCGAAACAGTCGCGGAAGCTGTCGGAAACATAGCGG‑CCGCGCCACGGAAGCCGAGCATCGGGTTCTCTTCATCTGGCTCGTAACGCTca < 1:738843/100‑1 (MQ=255) cacTCCAGCGCGAAACAGTCGCGGAAGCTGTCGGAAACATAGCGG‑CCGCGCCACGGAAGCCGAGCATCGGGTTCTCTTCATCTGGCTCGTAACGCTcacc > 1:2853819/1‑100 (MQ=255) tCCAGCGCGAAACAGTCGCGGAAGCTGTCGGAAACATAGCGG‑CCGCGCCACGGAAGCCGAGCATCGGGTTCTCTTCATCTGGCTCGTAACGCTCaccacc < 1:2413137/100‑1 (MQ=255) tCCAGCGCGAAACAGTCGCGGAAGCTGTCGGAAACATAGCGG‑CCGCGCCACGGAAGCCGAGCAACGGGTTCTCTTCATCTGGCTCGTAAAGATcaccac > 2:3475886/1‑99 (MQ=255) ccAGCGCGAAACAGTCGCGGAAGCTGTCGGAAACATAGCGGCCCGCGCCACGGAAGCCGAGCATCGGGTTGTCTTCATCTGGCTCGTAACGCTCaccacc > 1:203436/1‑100 (MQ=255) ccAGCGCGAAACAGTCGCGGAAGCTGTCGGAAACATAGCGGCCCGCGCCACGGAAGCCGAGCATCGGGTTCTCTTCATCTGGCTCGTAACGCTCaccacc > 1:175010/1‑100 (MQ=255) ccAGCGCGAAACAGTCGCGGAAGCTGTCGGAAACATAGCGGCCCGCGCCACGGAAGCCGAGCATCGGGTTCTCTTCATCTGGCTCGTAACGCTCaccacc < 2:2739815/100‑1 (MQ=255) ccAGCGCGAAACAGTCGCGGAAGCTGTCGGAAACATAGCGG‑CCGCGCCACGGAAGCCGAGCATCGGGTTCTCTTCATCTGGCTCGTAACGCTCACCACCg > 1:490759/1‑100 (MQ=255) ccAGCGCGAAACAGTCGCGGAAGCTGTCGGAAACATAGCGG‑CCGCGCCACGGAAGCCGAGCATCGGGTTCTCTTCATCTGGCTCGTAACGCTCACCACCg > 2:3212408/1‑100 (MQ=255) aGCGCGAAACAGTCGCGGAAGCTGTCGGAAACATAGCGG‑CCGCGCCACGGAAGCCGAGCATCGGGTTCTCTTCATCTGGCTCGTAACGCTCACCACCGAc > 1:276167/1‑100 (MQ=255) aGCGCGAAACAGTCGCGGAAGCTGTCGGAAACATAGCGG‑CCGCGCCACGGAAGCCGAGCATCGGGTTCTCTTCATCTGGCTCGTAACGCTCACCACCGAc > 1:830908/1‑100 (MQ=255) gcgcGAAACAGTCGCGGAAGCTGTCGGAAACATAGCGG‑CCGCGCCACGGAAGCCGAGCATCGGGTTCTCTTCATCTGGCTCGTAACGCTCACCACCGAcc < 2:3172666/100‑1 (MQ=255) cgAAACAGTCGCGGAAGCTGTCGGAAACATAGCGG‑CCGCGCCACGGAAGCCGAGCATCGGGTTCTCTTCATCTGGCTCGTAACGCTCACCACCGACCAgg < 1:68534/100‑1 (MQ=255) gAAACAGTCGCGGAAGCTGTCGGAAACATAGCGG‑CCGCGCCACGGAAGCCGAGCATCGGGTTCTCTTCATCTGGCTCGTAACGCTCACCACCGCCCAGGt > 1:3092794/1‑100 (MQ=255) aaCAGTCGCGGAAGCTGTCGGAAACATAGCGGCCCGCGCCACGGAAGCCGAGCATCGGGTTCTCTTCATCTGGCTCGTAACGCTCACCACCGACCAGGtt < 1:172722/100‑1 (MQ=255) aaCAGTCGCGGAAGCTGTCGGAAACATAGCGG‑CCGCGCCACGGAAGCCGAGCATCGGGTTCTCTTCATCTGGCTCGTAACGCTCACCACCGACCAGGTTg < 2:3207857/100‑1 (MQ=255) aCAGTCGCGGAAGCTGTCGGAAACATAGCGG‑CCGCGCCACGGAAGCCGAGCATCGGGTTCTCTTCATCTGGCTCGTAACGCTCACCACCGACCAGGTTgg < 1:2333064/100‑1 (MQ=255) cAGTCGCGGAAGCTGTCGGAAACATAGCGG‑CCGCGCCACGGAAGCCGAGCATCGGGTTCTCTTCATCTGGCTCGTAACGCTCACCACCGACCAGGTTGGc < 2:3807022/100‑1 (MQ=255) aGTCGCGGAAGCTGTCGGAAACATAGCGG‑CCGGGCCACGGAAGCCGAGCATCGGGTTCTCTTCATCTGGCTCGTAACGCTCACCACCGACCAGGTTGGCa < 2:1003476/100‑1 (MQ=255) aGTCGCGGAAGCTGTCGGAAACATAGCGG‑CCGCGCCACGGAAGCCGAGCATCGGGTTCTCTTCATCTGGCTCGTAACGCTCACCACCGACCAGGTTGGCa > 1:1424250/1‑100 (MQ=255) tCGCGGAAGCTGTCGGAAACATAGCGGCCCGCGCCACGGAAGCCGAGCATCGGGTTCTCTTCATCTGGCTCGTAACGCTCACCACCGACCAGGTTGGCat < 2:501215/100‑1 (MQ=255) cgGAAGCTGTCGGAAACATAGCGG‑CCGCGCCACGGAAGCCGAGCATCGGGTTCTCTTCATCTGGCTCGTAACGCTCACCACCGACCAGGTTGGCATAtt < 2:2632619/99‑1 (MQ=255) ggAAGCTGTCGGAAACATAGCGG‑CCGCGCCACGGAAGCCGAGCATCGGGTTCTCTTCATCTGGCTCGTAACGCTCACCACCGACCAGGTTGGCATAttcg < 1:3684930/100‑1 (MQ=255) aGCTGTCGGAAACATAGCGG‑CCGCGCCACGGAAGCCGAGCATCGGGTTCTCTTCATCTGGCTCGTAACGCTCACCACCGACCAGGTTGGCATAttcgttc < 1:2423782/100‑1 (MQ=255) aGCTGTCGGAAACATAGCGG‑CCGCGCCACGGAAGCCGAGCATCGGGTTCTCTTCATCTGGCTCGTAACGCTCACCACCGACCAGGTTGGCATAttcgttc < 2:1779852/100‑1 (MQ=255) gCTGTCGGAAACATAGCGG‑CCGCGCCACGGAAGCCGAGCATCGGGTTCTCTTCATCTGGCTCGTAACGCTCACCACCGACCAGGTTGGCATAttcgttcg < 1:3070668/100‑1 (MQ=255) gCTGTCGGAAACATAGCGG‑CCGCGCCACGGAAGCCGAGCATCGGGTTCTCTTCATCTGGCTCGTAACGCTCACCACCGACCAGGTTGGCATAttcgttcg < 1:1454061/100‑1 (MQ=255) gCTGTCGGAAACATAGCGG‑CCGCGCCACGGAAGCCGAGCATCGGGTTCTCTTCATCTGGCTCGTAACGCTCACCACCGACCAGGTTGGCATAttcgttcg < 2:1991427/100‑1 (MQ=255) cTGTCGGAAACATAGCGGCCCGCGCCACGGAAGCCGAGCATCGGGTTCTCTTCATCTGGCTCGTAACGCTCACCACCGACCAGGTTGGCATAtgcgttc > 1:3720755/1‑99 (MQ=255) tGTCGGAAACATAGCGG‑CCGCGCCACGGAAGCTGAGCATCGGGTTCTCTTCATCTGGCTCGTAACGCTCACCACCGACCAGGTTGGCATATTCGTTCGAt < 2:4089269/100‑1 (MQ=255) gTCGGAAACATAGCGG‑CCGCGCCACGGAAGCCGAGCATCGGGTTCTCTTCATCTGGCTCGTAACGCTCACCACCGACCAGGTTGGCATATTCGTTCGAtt < 1:1914820/100‑1 (MQ=255) cGGAAACATAGCGGCCCGCGCCACGGAAGCCGAGCGTCGGGTTCTCTTTATCTGGCTCGTTACGCTCACCACCGACCAGGTTGGCATATTCGTTCGAttt < 1:3876095/100‑1 (MQ=255) cGGAAACATAGCGGCCCGCGCCACGGAAGCCGAGCATCGGGTTCTCTTCATCTGGCTCGTAACGCTCACCACCGACCAGGTTGGCATATTCGTTCGAttt < 2:2334584/100‑1 (MQ=255) aCATAGCGG‑CCGCGCCACGGAAGCCGAGCATCGGGTTCTCTTCATCTGGCTCGTAACGCTCACCACCGACCAGGTTGGCATATTCGTTCGATTTAAAATc < 1:3974271/100‑1 (MQ=255) cATAGCGGCCCGCGCCACGGAAGCCGCGCATCGGGTTCTCTTCATCTGGCTCGTAACGCTCACCACCGACCAGGTTGGACTATTCGTTCGATTTaaaa > 2:3600104/1‑98 (MQ=255) cATAGCGG‑CCGCGCCACGGAAGCCGAGCATCGGGTTCTCTTCATCTGGCTCGTAACGCTCACCACCGACCAGGTTGGCATATTCGTTCGATTTAAAATCa < 2:547393/100‑1 (MQ=255) aTAGCGGCCCGCGCCACGGAAGCCGAGCATCGGGTTCTCTTCATCTGGCTCGTAACGCTCACCACCGACCAGGTTGGCATATTCGTTCGATTTAAAATCa < 1:2594229/100‑1 (MQ=255) aTAGCGG‑CCGCGCCACGGAAGCCGAGCATCGGGTTCTCTTCATCTGGCTCGTAACGCTCACCACCGACCAGGTTGGCATATTCGTTCGATTTAAAATCag > 2:2303963/1‑100 (MQ=255) tggCGGCCCGCGCCACGCAAGCCGAGCATCGGGTTCTCTTCTTCTGGCTCGTAACGCTCGCAACCGACCAGGTTGGCATATTCGTTCGATTTAAAATCag < 2:1855024/98‑1 (MQ=255) tAGCGGCCCGCGCCACGGAAGCCGAGCATCGGGTTCTCTTCATCTGGCTCGTAACGCTCACCACCGACCAGGTTGGCATATTCGTTCGATTTAAAATCag > 1:250422/1‑100 (MQ=255) tAGCGGCCCGCGCCACGGAAGCCGAGCATCGGGTTCTCTTCATCTGGCTCGTAACGCTCACCACCGACCAGGTTGGCATATTCGTTCGATTTAAAATCag < 2:2771276/100‑1 (MQ=255) tAGCGGCCCGCGCCACGGAAGCCGAGCATCGGGTTCTCTTCATCTGGCTCGTAACGCTCACCACCGACCAGGTTGGCATATTCGTTCGATTTAAAATCag < 1:185189/100‑1 (MQ=255) aGCGG‑CCGCGCCACGGAAGCCGAGCATCGGGTTCTCTTCATCTGGCTCGTAACGCTCACCACTGACCAGGTTGGCATATTCGTTCGATTTAAAATCagag < 2:2197480/100‑1 (MQ=255) aGCGG‑CCGCGCCACGGAAGCCGAGCATCGGGTTCTCTTCATCTGGCTCGTAACGCTCACCACCGACCAGGTTGGCCTATTCGTTCGATTTAAAATCagag > 2:478992/1‑100 (MQ=255) aGCGG‑CCGCGCCACGGAAGCCGAGCATCGGGTTCTCTTCATCTGGCTCGTAACGCTCACCACCGACCAGGTTGGCATATTCGTTCGATTTAAAATCagag < 1:3244715/100‑1 (MQ=255) aGCGG‑CCGCGCCACGGAAGCCGAGCATCGGGTTCTCTTCATCTGGCTCGTAACGCTCACCACCGACCAGGTTGGCATATTCGTTCGATTTAAAATCagag < 2:44970/100‑1 (MQ=255) aGCGG‑CCGCGCCACGGAAGCCGAGCATCGGGTTCTCTTCATCTGGCTCGTAACGCTCACCACCGACCAGGTTGGCATATTCGTTCGATTTAAAATCagag < 1:3038370/100‑1 (MQ=255) aGCGG‑CCGCGCCACGGAAGCCGAGCATCGGGTTCTCTTCATCTGGCTCGTAACGCTCACCACCGACCAGGTTGGCATATTCGTTCGATTTAAAATCagag > 1:947526/1‑100 (MQ=255) gCGGCCCGCGCCACGGAAGCCGAGCATCGGGTTCTCTTCATCTGGCTCGTAACGCTCACCACCGACCAGGTTGGCATATTCGTTCGATTTAAAATCagag > 1:108773/1‑100 (MQ=255) cccGCGCCACGGAAGCCGAGCATCGGGTTCTCTTCATCTGGCTCGTAACGCTCACCACCGACCAGGTTGGCATATTCGTTCGATTTAAAATCAGAGAGAc > 1:2020759/1‑100 (MQ=255) | ATCTCAACGTTGGTCAGTCCCATGTCGTTGCGCACACGTTTCACTGCTTCACACTCCAGCGCGAAACAGTCGCGGAAGCTGTCGGAAACATAGCGGCCCGCGCCACGGAAGCCGAGCATCGGGTTCTCTTCATCTGGCTCGTAACGCTCACCACCGACCAGGTTGGCATATTCGTTCGATTTAAAATCAGAGAGAC > NC_000913/1785185‑1785380 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |