Predicted mutation | |||||||
---|---|---|---|---|---|---|---|
evidence | seq id | position | mutation | freq | annotation | gene | description |
RA | NC_000913 | 2,987,655 | Δ1 bp | 54.9% | coding (120/633 nt) | yqeH → | putative LuxR family transcriptional regulator |
Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_000913 | 2,987,654 | 0 | G | . | 54.9% | 7.4 / inf | 153 | coding (119/633 nt) | yqeH | putative LuxR family transcriptional regulator |
Reads supporting (aligned to +/- strand): ref base G (28/41); new base . (41/43); total (69/84) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 3.31e-01 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.20e-01 |
Only 100 of 167 total aligned reads displayed.
ATAAAAGTCTTACATGCAATAGTTGCTCAATGCATTGCCAAATAATGCCAGAAGAGTCACCGCGTTTGCAGTATTGCGCAAACTCGTGTTTTTGTATGTGGCCCGAAGAAAGTTCATATTTTAATCGTGGTGTGGTAGAAGGTATCTTAACAAAAAACCACAATGCGAGATTAAGCGGATATATTTTTGTCGATTTTTC > NC_000913/2987555‑2987753 | ataAAAGTCTTACATGCAATAGTTGCTCAATGCATTGCCAAATAATGCCAGAAGAGTCACCGCGTTTGCAGTATTGCGCAAACTCGTGTTTTTGTAtgtg > 1:583064/1‑100 (MQ=255) ataAAAGTCTTACATGCAATAGTTGCTCAATGCATTGCCAAATAATGCCAGAAGAGTCACCGCGTTTGCAGTATTGCGCAAACTCGTGTTTTTGTAtgtg > 1:3472927/1‑100 (MQ=255) taAAAGTCTTACATGCAATAGTTGCTCAATGCATTGCCAAATAATGCCAGAAGAGTCACCGCGTTTGCAGTATTGCGCAAACTCGTGTTTTTGTAtgtgc > 2:2304013/1‑99 (MQ=255) taAAAGTCTTACATGCAATAGTTGCTCAATGCATTGCCAAATAATGCCAGAAGAGTCACCGCGTTTGCAGTATTGCGCAAACTCGTGTTTTTGTATGTgg > 1:3289069/1‑100 (MQ=255) taAAAGTCTTACATGCAATAGTTGCTCAATGCAATGCCAAATAATGCCAGAAGAGTCACCGCGTTTGCAGTATCGCGCAAACTCGTGTTTTTGTAtgtgc > 1:737229/1‑99 (MQ=255) aaaGTCTTACATGCAATAGTTGCTTCTTGCGTTGTCATATAATGCCAGAAGAGTCACCGCGTTTGGAGTATTGCGCAAACTCGTGTTTGTGTCTGTGGcc < 2:2167463/100‑1 (MQ=255) aaaGTCTTACATGCAATAGTTGCTCAATGCATTGCCAAATAATGCCAGAAGAGTCACCGCGTTTGCAGTATTGCGCAAACTCGTGTTTTTGTAtgtgccc > 1:2630558/1‑97 (MQ=255) aaaGTCTTACATGCAATAGTTGCTCAATGCATTGCCAAATAATGCCAGAAGAGTCACCGCGTTTGCAGTATTGCGCAAACTCGTGTTTTTGTATGTGGcc < 1:2230847/100‑1 (MQ=255) aaGTCTTACATGCAATAGTTGCTCAATGCATTGCCAAATAATGCCAGAAGAGTCACCGCGTTTGCAGTATTGCGCAAACTCGTGTTTTTGTATGTGcccg < 2:2468331/100‑2 (MQ=255) aGTCTTACATGCAATAGTTGCTCAATGCATTGCCAAATAATGCCAGAAGAGTCACCGCGTTTGCAGTATTGCGCAAACTCGTGTTTTTGTATGT‑GCCCga < 1:843129/100‑1 (MQ=255) gTCTTACATGCAATAGTTGCTCAATGCATTGCCAAATAATGCCAGAAGAGTCACCGCGTTTGCAGTATTGCGCAAACTCGTGTTTTTGTATGTGGCCCga < 2:2998022/100‑1 (MQ=255) cTTACATGCAATAGTTGCTCAATGCATTGCCAAATAATGCCAGAAGAGTCACCGCGTTTGCAGTATTGCGCAAACTCGTGTTTTTGTATGTGGCCCgaag > 1:82556/1‑100 (MQ=255) cTTACATGCAATAGTTGCTCAATGCATTGCCAAATAATGCCAGAAGAGTCACCGCGTTTGCAGTATTGCGCAAACTCGTGTTTTTGTATGTGGCCCgaag > 1:1357401/1‑100 (MQ=255) tACATGCAATAGTTGCTCAATGCATTGCCAAATAATGCCAGAAGAGTCACCGCGTTTGCAGTATTGCGCAAACTCGTGTTTTTGTATGTGGCCCgaagaa > 2:3741662/1‑100 (MQ=255) aCATGCAATAGTTGCTCAATGCATTGCCAAATAATGCCAGAAGAGTCTCCGCGTTTGCAGTATTGCGCAAACTCGTGTTTTTGTATGT‑GCGCGAAGAAAg < 2:177980/100‑1 (MQ=255) aCATGCAATAGTTGCTCAATGCATTGCCAAATAATGCCAGAAGAGTCACCGCGTTTGCAGTATTGCGCAAACTCGTGTTTTTGTATGT‑GCCCGAAGAAAg < 2:1989846/100‑1 (MQ=255) cATGCAATAGTTGCTCAATGCATTGCCAAATAATGCCAGAAGAGTCACCGCGTTTGCAGTATTGCGCAAACTCGTGTTTTTGTATGT‑GCCCGAAGAAAGt < 1:555886/100‑1 (MQ=255) cATGCAATAGTTGCTCAATGCATTGCCAAATAATGCCAGAAGAGTCACCGCGTTTGCAGTATTGCGCAAACTCGTGTTTTTGTATGT‑GCCCGAAGAAAGt < 1:3765206/100‑1 (MQ=255) aTGCAATAGTTGCTCAATGCATTGCCAAATAATGCCAGAAGAGTCACCGCGTTTGCAGTATTGCGCAAACTCGTGTTTTTGTATGT‑GCCCGAAGAAAGtt < 2:3631796/100‑1 (MQ=255) tgtaaTAGTTGCTCAATGCATTTGCAAATACTGCCATAAGAGTCACCGAGTTTTTAGTATTTCGCAACCTCGTGTTTCTGTATGT‑GCCCGAAGAAAGTTc < 2:3831948/97‑1 (MQ=255) tGCAATAGTTGCTCAATGTATTGCCAAATAATGCCAGAAGAGTCATCGCGTTTGCAGTATTGCGCAACCTCGTGTTTTTGTATGTGGCCCGAAGAAAGtt < 2:1998984/100‑1 (MQ=255) tGCAATAGTTGCTCAATGCATTGCCAAATAATGCCAGAAGAGTCACCGCGTTTGCAGTATTGCGCAAACTCGTGTTTTTGTATGT‑GCCCGAAGAAAGTTc > 1:2329709/1‑100 (MQ=255) tGCAATAGTTGCTCAATGCATTGCCAAATAATGCCAGAAGAGTCACCGCGTTTGCAGTATTGCGCAAACTCGTGTTTTTGTATGT‑GCCCGAAGAAAGTTc > 1:3598978/1‑100 (MQ=255) gCAATAGTTGCTCAATGCATTGCCAAATAATGCCAGAAGAGTCACCGCGTTTGCAGTATTGCGCAAACTCGTGTTTTTGTATGT‑GCCCGAAGAAAGTTCa < 2:931566/100‑1 (MQ=255) cAATAGTTGCTCAATGCATTGCCAAATAATGCCAGAAGAGTCACCGCGTTTGCAGTATTGCGCAAACTCGTGTTTTTGTATGT‑GCCCGAAGAAAGTTCat > 1:646248/1‑100 (MQ=255) aGTTGCTCAATGCATTGCCAAATAATGCCAGAAGAGTCACCGCGTTTGCAGTATTGCGCAAACTCGTGTTTTTGTATGTGGCCCGAAGAAAGTTCATAtt < 2:913262/100‑1 (MQ=255) tGCTCAATGCATTGCCAAATAATGCCAGAAGAGTCACCGCGTTTGCAGTATTGCGCAAACTCGTGTTTTTGTATGTGGCCCGAAGAAAGTTCATATTTTa > 2:2094732/1‑100 (MQ=255) gCTCAATGCATTGCCAAATAATGCCAGAAGAGTCACCGCGTTTGCAGTATTGCGCAAACTCGTGTTTTTGTATGT‑GCCCGAAGAAAGTTCATATTTTAAt > 1:2450738/1‑100 (MQ=255) gtCAATGCATTGCCAAATAATGCCAGAAGAGTCACCGCGTTTGCAGTATTGCGCAAACTCGTGTTGTTGTATGT‑GCCTGAAGAAAGTTCATATTTTAATc > 2:606872/2‑100 (MQ=255) cTCAATGCATTGCCAAATAATGCCAGAAGAGTCACCGCGTTTGCAGTATTGCGCAAACTCGTGTTTTTGTATGTGGCCCGAAGAAAGTTCATATTTTAAt < 2:1133204/100‑1 (MQ=255) tCAATGCATTGCCAAATAATGCCAGAAGAGTCACCGCGTTTGCAGTATTGCGCAAACTCGTGTTTTTGTATGTGGCCCGAAGAAAGTTCATATTTTAATc > 1:2085464/1‑100 (MQ=255) tCAATGCATTGCCAAATAATGCCAGAAGAGTCACCGCGTTTGCAGTATTGCGCAAACTCGTGTTTTTGTATGTGGCCCGAAGAAAGTTCATATTTTAATc < 2:82555/100‑1 (MQ=255) tCAATGCAGTGCCAAATAATGCCAGAAGAGTCACCGCGCTTGCAGTATTGCGCAAACTTGTGTTTTTGTATGT‑GCCCGAAGAAAGTTCATATTTTAATCg < 2:2251403/100‑1 (MQ=255) cAATGCATTGCCAAATAATGCCAGAAGAGTCACCGCGTTTGCAGTATTGCGCAAACTCGTGTTTTTGTATGTGGCCCGAAGAAAGTTCATATTTTAATCg < 1:3122998/100‑1 (MQ=255) cAATGCATTGCCAAATAATGCCAGAAGAGTCACCGCGTTTGCAGTATTGCGCAAACTCGTGTTTTTGTATGTGGCCCGAAGAAAGTTCATATTTTAATCg > 1:2984742/1‑100 (MQ=255) cAATGCATTGCCAAATAATGCCAGAAGAGTCACCGCGTTTGCAGTAATGCGCAAACTCGTGTTTTTGTATGT‑GCCCGAAGACAGTTCATATTTTAATCgt > 2:995158/1‑100 (MQ=255) aTGCATTGCTAAATAATGCCAGAAGAGTCACCGCGTTTGCAGTATTGCGCAAACTCGTGTTTTTGTATGT‑TCTCGAAGAAAGTTCATATTTTAATCgtgg > 2:588569/1‑100 (MQ=255) aTGCATTGCCAATTAGTGCCAGGAGAGTCACCGCGTTTTCAGCATTACTCAAACTCGTGTTTTTGTATGT‑ACCCGAGGAAAGTTTATATTTTTATCgtgg > 2:1908360/1‑100 (MQ=255) aTGCATTGCCAAATAATGCCAGAAGAGTCACCGCGTTTGCAGTATTGCGCAAACTCGTGTTTTTGTATGT‑GCCCGAAGAAAGTTCATATTTTAATCgtgg > 2:3467615/1‑100 (MQ=255) aTGCATTGCCAAATAATGCCAGAAGAGTCACCGCGTTTGCAGTATTGCGCAAACTCGTGTTTTTGTATGT‑GCCCGAAGAAAGTTCATATTTTAATCgtgg < 2:287419/100‑1 (MQ=255) aTGCATTGCCAAATAATGCCAGAAGAGTCACCGCGTTTGCAGTATTGCGCAAACTCGTGTTTTTGTATGT‑GCCCGAAGAAAGTTCATATTTTAATCgtgg < 1:662361/100‑1 (MQ=255) cATTGCCAAATAATGCCAGAAGAGTCACCGCGTTTGCAGTATTGCGCAAACTCGTGTTTTTGTATGT‑GCCCGAAGAAAGTTCATATTTTAATCgtggtgt < 2:3660562/100‑1 (MQ=255) ttGCCAAATAATGCCAGAAGAGTCACCGCGTTTGCAGTATTGCGCAAACTCGTGTTTTTGTATGTGGCCCGAAGAAAGTTCATATTTTAATCgtggtgtg < 2:2130386/100‑1 (MQ=255) tGCCAAATAATGCCAGAAGAGTCACCGCGTTTGCAGTATTGCGCAAACTCGTGTTTTTGTATGT‑GCCCGAAGAAAGTTCATATTTTAATCgtggtgtggt < 2:1416837/100‑1 (MQ=255) tGCCAAATAATGCCAGAAGAGTCACCGCGTTTGCAGTATTGCGCAAACTCGTGTTTTTGTATGT‑GCCCGAAGAAAGTTCATATTTTAATCgtggtgtggt < 2:2095147/100‑1 (MQ=255) gCCAAATAATGCCAGAAGAGTCACCGCGTTTGCAGTATTGCGCAAACTCGTGTTTTTGTATGTGGCCCGAAGAAAGTTCATATTTTAATCgtggtgtggt > 2:122526/1‑100 (MQ=255) gCCAAATAATGCCAGAAGAGTCACCGCGTTTGCAGTATTGCGCAAACTCGTGTTTTTGTATGTGGCCCGAAGAAAGTTCATATTTTAATCgtggtgtggt > 1:4111832/1‑100 (MQ=255) gCCAAATAATGCCAGAAGAGTCACCGCGTTTGCAGTATTGCGCAAACTCGTGTTTTTGTATGTGGCCCGAAGAAAGTTCATATTTTAATCgtggtgtggt > 2:3483419/1‑100 (MQ=255) ccAAATAATGCCAGAAGAGTCACCGCGTTTGCAGTATTGCGCAAACTCGTGTTTTTGTATGT‑GCCCGAAGAAAGTTCATATTTTAATCGTGGTGTGGTAg > 2:2607248/1‑100 (MQ=255) cAAATAATGCCAGAAGAGTCACCGCGTTTGCAGTATTGCGCAAACTCGTGTTTTTGTATGT‑GCCCGAAGAAAGTTCATATTTTAATCGTGGTGTGGTAGa < 1:1308772/100‑1 (MQ=255) aaaTAATGCCAGAAGAGTCACCGCGTTTGCAGTATTGCGCAAACTCGTGTTTTTGTATGTGGCCCGAAGAAAGTTCATATTTTAATCGTGGTGTGGTAGa < 1:4084115/100‑1 (MQ=255) aataatGCCAGAAGAGTCACCGCGTTTGCAGTATTGCGCAAACTCGTGTTTTTGTATGT‑GCCCGAAGAAAGTTCATATTTTAATCGTGGTGTGGTAGAAg < 2:528908/100‑1 (MQ=255) ataatGCCAGAAGAGTCACCGCGTTTGCAGTATTGCGCAAACTCGTGTTTTTGTATGT‑GCCCGAAGAAAGTTCATATTTTAATCGTGGTGTGGTAGAAgg < 2:1412980/100‑1 (MQ=255) taatGCCAGAAGAGTCACCGCGTTTGCAGTATTGCGCAAACTCGTGTTTTTGTATGTGGCCCGAAGAAAGTTCATATTTTAATCGTGGTGTGGTAGAAgg < 1:2843770/100‑1 (MQ=255) taatGCCAGAAGAGTCACCGCGTTTGAAGTATTGCGCAAACTCGTGTTTTTGTATGT‑GCCCGAAGAAAGTTCATATTTTAATCTTGGTGTGGTAGAAGGt < 2:1651299/100‑1 (MQ=255) atGCCAGAAGAGTCACCGCGTTTGCAGTATTGCGCAAACTCGTGTTTTTGTATGTGGCCCGAAGAAAGTTCATATTTTAATCGTGGTGTGGTAGAAGGTa < 1:1184403/100‑1 (MQ=255) tGCCAGAAGAGTCACCGCGTTTGCAGTATTGCGCAAACTCGTGTTTTTGTATGTGGCCCGAAGAAAGTTCATATTTTAATCGTGGTGTGGTAGAAGGTAt > 2:4095840/1‑100 (MQ=255) tGCCAGAAGAGTCACCGCGTTTGCAGTATTGCGCAAACTCGTGTTTTTGTATGT‑GCCCGAAGAAAGTTCATATTTTAATCGTGGTGTGGTAGAAGGTATc > 2:725730/1‑100 (MQ=255) tGCCAGAAGAGTCACCGCGTTTGCAGTATTGCGCAAACTCGTGTTTTTGTATGT‑GCCCGAAGAAAGTTCATATTTTAATCGTGGTGTGGTAGAAGGTATc < 1:829134/100‑1 (MQ=255) tGCCAGAAGAGTCACCGCGTTTGCAGTATTGCGCAAACTCGTGTTTTTGTATGT‑GCCCGAAGAAAGTTCATATTTTAATCGTGGTGTGGTAGAAGGTATc < 1:2295043/100‑1 (MQ=255) ccAGAAGAGTCACCGCGTTTGCAGTATTGCGCAAACTCGTGTTTTTGTATGTGGCCCGAAGAAAGTTCATATTTTAATCGTGGTGTGGTAGAAGGTATCt > 2:3597876/1‑100 (MQ=255) ccAGAAGAGTCACCGCGTTTGCAGTATTGCGCAAACTCGTGTTTTTGTATGTGG‑CCGAAGGAAGGTCATATTTTAATCGTGGTTTGGTAGAAGGTagc > 1:2250853/1‑96 (MQ=255) ccAGAAGAGTCACCGCGTTTGCAGTATTGCGCAAACTCGTGTTTTTGTATGT‑GCCCGAAGAAAGTTCATATTTTAATCGTGGTGTGGTAGAAGGTATCtt < 1:726680/100‑1 (MQ=255) cAGAAGAGTCACCGCGTTTGCAGTATTGCGCAAACTCGTGTTTTTGTATGT‑GCCCGAAGAAAGTTCATATTTTAATCGTGGTGTGGTAGAAGGTATCTTa < 1:1041110/100‑1 (MQ=255) agaagaGTCACCGCGTTTGCAGTATTGCGCAAACTCGTGTTTTTGTATGTGGCCCGAAGAAAGTTCATATTTTAATCGTGGTGTGGTAGAAGGTATCTTa < 1:2004876/100‑1 (MQ=255) agagTCACCGCGTTTGCAGTATTGCGCAAACTCGTGTTTTTGTATGTGGCCCGAAGAAAGTTCATATTTTAATCGTGGTGTGGTAGAAGGTATCTTAACa > 2:3377937/1‑100 (MQ=255) agTCACCGCGTTTGCAGTATTGCGCAAACTCGTGTTTTTGTATGT‑GCCCGAAGAAAGTTCATATTTTAATCGTGGTGTGGTAGAAGGTATCTTAACaaaa > 2:3273526/1‑100 (MQ=255) gTCACCGCGTTTGCAGTATTGCACAAACTCGTGTTTTTGTATGT‑GCACGAAGAAAGTTCATATTTTAATCGTGGTGTGGTAGAAGGTATCTTAACaaaaa < 2:1021035/100‑1 (MQ=255) cACCGCGTTTGCAGTATTGCGCAAACTCGTGTTATTGTATGT‑GCCCGAAGAAAGTTCATATTTTAATCGTCGTGTGGTAGAAGGTATCTTAACAAAAAAc > 2:2480423/1‑100 (MQ=255) aCCGCGTTTGCAGTACTGCGCAAACTCGTGTTTTTGTATGTGGCCCGAAGAAAGTTCATATTTTAATCGTGGTGTGGTAGAAGGTATCTTAACAAAAAAc < 1:1992273/100‑1 (MQ=255) ccGCGTTTGCAGTATTGCGCAAACTCGTGTTTTTGTATGT‑GCCCGAAGAAAGTTCATATTTTAATCGTGGTGTGGTAGAAGGTATCTTAACAAAAAACca > 2:3577673/1‑100 (MQ=255) cgcgTTTGCAGTATTGCGCAAACTCGTGTTTTTGTATGT‑GCCCGAAGAAAGTTCATATTTTAATCGTGGTGTGGTAGAAGGTATCTTAACAAAAAACcac > 2:4052393/1‑100 (MQ=255) gcgTTTGCAGTATTGCGCAAACTCGTGTTTTTGTATGTGGCCCGAAGAAAGTTCATATTTTAATCGTGGTGTGGTAGAAGGTATCTTAACAAAAAACcac < 2:2565595/100‑1 (MQ=255) gcgTTTGCAGTATTGCGCAAACTCGTGTTTTTGTATGT‑GCTCGAAGAAAGTTCATATTTTAATCGTGGTGTGGTAGAAGGTATTTTAACAAAAAACtac > 2:2390462/1‑99 (MQ=255) gcgTTTGCAGTATTGCGCAAACTCGTGTTTTTGTATGT‑GCCCGAAGAAAGTTCATATTTTAATCGTGGTGTGGTAGAAGGTATCTTAACAAAAAACcaca < 1:2132982/100‑1 (MQ=255) gTTTGCAGTATTGCGCAAACTCGTGTTTTTGTATGTGGCCCGAAGAAAGTTCATATTTTAATCGTGGTGTGGTAGAAGGTATCTTAACAAAAAACCACaa > 1:1799016/1‑100 (MQ=255) gTTTGCAGTATTGCGCAAACTCGTGTTTTTGTATGT‑GCCCGAAGAAAGTTCATATTTTAATCGTGGTGTGGTAGAAGGTATCTTAACAAAAAACCACAAt > 2:1752471/1‑100 (MQ=255) tGCAGTATTGCGCAAACTCGTGTTTTTGTATGT‑GCCCGAAGAAAGTTCATATTTTAATCGTGGTGTGGTAGAAGGTATCTTAACAAAAAACCACAATGCg > 1:278072/1‑100 (MQ=255) tGCAGTATTGCGCAAACTCGTGTTTTTGTATGT‑GCCCGAAGAAAGTTCATATTTTAATCGTGGTGTGGTAGAAGGTATCTTAACAAAAAACCACAATGCg > 2:2924937/1‑100 (MQ=255) aGTATTGCGCAAACTCGTGTTTTTGTATGT‑GCCCGAAGAAAGTTCATATTTTAATCGTGGTGTGGTAGAAGGTATCTTAACAAAAAACCACAATGCgaga < 1:3245860/100‑1 (MQ=255) gcgcAAACTCGTGTTTTTGTATGTGGCCCGAAGAAAGTTCATATTTTAATCGTGGTGTGGTAGAAGGTATCTTAACAAAAAACCACAATGCGAGATTAAg > 2:3952133/1‑100 (MQ=255) gcgcAAACTCGTGTTTTTGTATGT‑GCCCGAAGAAAGTTCATATTTTAATCGTGGTGTGGTAGAAGGTATCTTAACAAAAAACCACAATGCGAGATTAAGc < 2:3158268/100‑1 (MQ=255) gcgcAAACTCGTGTTTTTGTATGT‑GCCCGAAGAAAGTTCATATTTTAATCGTGGTGTGGTAGAAGGTATCTTAACAAAAAACCACAATGCGAGATTAAGc > 1:1899270/1‑100 (MQ=255) aaaCTCGTGTTTTTGTATGTGGCCCGAAGAAAGTTCATATTTTAATCGTGGTGTGGTAGAAGGTATCTTAACAAAAAACCACAATGCGAGATTAAGCGGa < 2:3582697/100‑1 (MQ=255) aaaCTCGTGTTTTTGTATGT‑GCCCGAAGAAAGTTCATATTTTAATCGTGGTGTGGTAGAAGGTATCTTAACAAAAAACCACAATGCGAGATTAAGCGGat < 1:1021937/100‑1 (MQ=255) aaaCTCGTGTTTTTGTATGT‑GCCCGAAGAAAGTTCATATTTTAATCGTGGTGTGGTAGAAGGTATCTTAACAAAAAACCACAATGCGAGATTAAGCGGat > 1:3593044/1‑100 (MQ=255) aCTCGTGTTTTTGTATGTGGCCCGAAGAAAGTTCATATTTTAATCGTGGTGTGGTAGAAGGTATCTTAACAAAAAACCACAATGCGAGATTAAGCGGata < 1:3264292/100‑1 (MQ=255) aCTCGTGTTTTTGTATGTGGCCCGAAGAAAGTTCATATTTTAATCGTGGTGTGGTAGAAGGTATCTTAACAAAAAACCACAATGCGAGATTAAGCGGata < 1:3172785/100‑1 (MQ=255) cTCGTGTTTTTGTATGT‑GCCCGAAGAAAGTTCATATTTTAATCGTGGTGTGGTAGAAGGTATCTTAACAAAAAACCACAATGCGAGATTAAGCGGatata > 2:3154071/1‑100 (MQ=255) cTCGTGTTTTTGTATGT‑GCCCGAAGAAAGTTCATATTTTAATCGTGGTGTGGTAGAAGGTATCTTAACAAAAAACCACAATGCGAGATTAAGCGGatata > 2:3813017/1‑100 (MQ=255) tCGTGTTTTTGTATGTGGCCCGAAGAAAGTTCATATTTTAATCGTGGTGTGGTAGAAGGTATCTTAACAAAAAACCACAATGCGAGATTAAGCTGatata > 2:228458/1‑100 (MQ=255) cGTGTTTTTGTATGTGGCCCGAAGAAAGTTCATATTTTAATCGTGGTGTGGTAGAAGGTATCTTAACAAAAAACCACAATGCGAGATTAAGCGGatat < 2:2808558/98‑1 (MQ=255) tgtTTTTGTATGT‑GCCCGAAGAAAGGTCATATTTTAATCGTGGTGTGGTAGAAGGTATCTTAACAAAAAACCACAATGCGAGATTAAGCGGATATAtttt < 1:3867901/100‑1 (MQ=255) ttttGTATGTGGCCCGAAGAAAGTTCATATTTTAATCGTGGTGTGGTAGAAGGTATCTTAACAAAAAACCACAATGCGAGATTAAGCGGATATATTTTTg < 1:1925539/100‑1 (MQ=255) tttGTATGTGGCCCGAAGAAAGTTCATATTTTAATCGTGGTGTGGTAGAAGGTATCTTAACAAAAAACCACAATGCGAGATTAAGCGGATATAtttt < 1:3012441/97‑1 (MQ=255) tttGTATGT‑GCCCGAAGAAAGTTCATATTTTAATCGTGGTGTGGTAGAAGGTATCTTAACAAAAAACCACAATGCGAGATTAAGCGGATATATTTTTGTc < 2:2076766/100‑1 (MQ=255) nttGTATGTGGCCCGAAGAAAGTTCATATTTTAATCGTGGTGTGGTAGAAGGTATCTTAACAAAAAACCACAATGCGAGATTAAGCGGataaatatatg > 2:2605151/2‑94 (MQ=255) gTATGT‑GCCCGAAGAAAGTTCATATTTTAATCGTGGTGTGGTAGAAGGTATCTTAACAAAAAACCACAATGCGAGATTAAGCGGATATATTTTTGTCGAt > 1:1728066/1‑100 (MQ=255) aTGTGGCCCGAAGAAAGTTCATATTTTAATCGTGGTGTGGTAGAAGGTATCTTAACAAAAAACCACAATGCGAGATTAAGCGGATATATTTTTGTCGAtt < 1:3097175/100‑1 (MQ=255) ggCCCGAAGAAAGTTCATATTTTAATCGTGGTGTGGTAGAAGGTATCTTAACAAAAAACCACAATGCGAGATTAAGCGGATATATTTTTGTCGATTTTTc > 2:2139644/1‑100 (MQ=255) | ATAAAAGTCTTACATGCAATAGTTGCTCAATGCATTGCCAAATAATGCCAGAAGAGTCACCGCGTTTGCAGTATTGCGCAAACTCGTGTTTTTGTATGTGGCCCGAAGAAAGTTCATATTTTAATCGTGGTGTGGTAGAAGGTATCTTAACAAAAAACCACAATGCGAGATTAAGCGGATATATTTTTGTCGATTTTTC > NC_000913/2987555‑2987753 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |