New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 3426965	NA (NA)	11 (0.080)	8/170	NT	NA	noncoding (69/76 nt)	alaU	tRNA‑Ala
	?	NC_000913	= 3426988	NA (NA)					noncoding (46/76 nt)	alaU	tRNA‑Ala

ATTTTCAGCTTGATCCAGATTTTTAAAGAGCAAAACTTCGCAGTGAACCTTTGCAGGTACACTCTGAAGTATTTTTTATTTAATCACTACAGAGATGGTGGAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/3426863‑3426965 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggagGTCTGCGGTTCGATCCCGCATAGCTCCACCATCTCTGTAGTGATTAAATAAAAAATACTTCAGAGTGTACCTGCAAAGGTTCACTGCGAAGTTTTGCTC  <  NC_000913/3426988‑3426890                                                                                                                                                                                                            ATTTTCAGCTTGATCCAGATTTTTAAAGAGCAAAACTTCGCAGTGAACCTTTGCAGGTACACTCTGAAGTATTTTTTATTTAATCACTACAGAGATGGTG                                                                                                        <  2:297167/100‑1  TTTTCAGCTTGATCCAGATTTTTAAAGAGCAAAACTTCGCAGTGAACCTTTGCAGGTACACTCTGATGTATTTTTTATTTAATCACTACAGAGATGGTGG                                                                                                       <  2:2729988/100‑1  TTTTCAGCTTGATCCAGATTTTTAAAGAGCAAAACTTCGCAGTGAACCTTTGCAGGTACACTCTGAAGTATTTTTTATTTAATCACTACAGAGATGGTGG                                                                                                       <  2:3000319/100‑1  TTTTCAGCTTGATCCAGATTTTTAAAGAGCAAAACTTCGCAGTGAACCTTTGCAGGTACACTCTGAAGTATTTTTTATTTAATCACTACAGAGATGGTGG                                                                                                       <  2:897339/100‑1   TTTCAGCTTGATCCAGATTTTTAAAGAGCAAAACTTCGCAGTGAACCTTTGCAGGTACACTCTGAAGTATTTTTTATTTAATCACTACAGAGATGGTGGA                                                                                                      <  1:1235021/100‑1    TTCAGCTTGATCCAGATTTTTAAAGAGCAAAACTTCGCAGTGAACCTTTGCAGGTACACTCTGAAGTATTTTTTATTTAATCACTACAGAGATGGTGGAG                                                                                                     <  2:746327/100‑1    TTCAGCTTGATCCAGATTTTTAAAGAGCAAAACTTCGCAGTGAACCTTTGCAGGTACACTCTGAAGTATTTTTTATTTAATCACTACAGAGATGGTGGAG                                                                                                     >  1:3210932/1‑100    TTCAGCTTGATCCAGATTTTTAAAGAGCAAAACTTCGCAGTGAACCTTTGCAGGTACACTCTGAAGTATTTTTTATTTAATCACTACAGAGATGGTGGAG                                                                                                     <  2:3397961/100‑1    TTCAGCTTGATCAAGATTTTTAAAGAGCAAAACTTCGCAGTGAACCTTTGCAGGTACACTCTGAAGTATTTTTTATTTAATCAATACACAGATGGTTGAG                                                                                                     >  2:3584373/1‑100                            GAGCAAAACTTCGCAGTGAACCTTTGCAGGTACACTCTGAAGTATTTTTTATTTAACCACTACAGAGATGGTGGAGCTATGCGGTTCGATCCCGCATAGC                                                                             <  2:3194680/100‑1                             AGCAAAACTTCGCAGTGAACCTTTGCAGGTACACTCTGAAGTATTTTTTATTTAATCACTACAGAGATGGTGGAGCTATGCGGTTCGATCCCGCATAGCT                                                                            <  2:4016459/100‑1                             AGCAAAACTTCGCAGTGAACCTTTGCAGGTACACTCTGAAGTATTTTTTATTTAACCACTACAGAGATGGTGGAGCTATGCGGTTCGATCCCGCATAGCT                                                                            <  2:4027664/100‑1                                 AAACTTCGCAGTGAACCTTTGCAGGTACACTCTGAAGTATTTTTTATTTAATCACTACAGAGATGGTGGAGGTCTGCGGTTCGATCCCGCATAGCTCCAC                                                                        <  1:2830917/100‑1                                  AACTTCGCAGTGAACCTTTGCAGGTACACTCTGAAGTATTTTTTATTTAATCACTACAGAGATGGTGGAGGTCTGCGGTTCGATCCCGCATAGCTCCACC                                                                       <  1:9717/100‑1                                   ACTTCGCAGTGAACCTTTGCAGGTACACTCTGAAGTATTTTTTATTTAATCACTACAGAGATGGTGGAGGTCTGCGGTTCGATCCCGCATAGCTCCACCA                                                                      <  1:130887/100‑1                                    CTTCGCAGTGAACCTTTGCAGGTACACTCTGAAGTATTTTTTATTTAATCACTACAGAGATGGTGGAGGTCTGCGGTTCGATCCCGCATAGCTCCACCAT                                                                     <  2:3900551/100‑1                                     TTCGCAGTGAACCTTTGCAGGTACACTCTGAAGTATTTTTTATTTAATCACTACAGAGATGGTGGAGGTCTGCGGTTCGATCCCGCATAGCTCCACCATC                                                                    <  1:3904133/100‑1                                     TTCGCAGTGAACCTTTGCAGGTACACTCTGAAGTATTTTTTATTTAATCACTACAGAGATGGTGGAGGTCTGCGGTTCGATCCCGCATAGCTCCACCATC                                                                    <  1:1280723/100‑1                                        GCAGTGAACCTTTGCAGGTACACTCTGAAGTATTTTTTATTTAATCACTACAGAGATGGTGGAGGTCTGCGGTTCGATCCCGCATAGCTCCACCATCTCT                                                                 <  1:1560779/100‑1                                                                 TGAAGTATTTGTTATTTAATCACTACAGAGATGGTGGAGCTATGCGGTTCGATCCCGCATAGCTCCACCATCTCTGTAGTGATTAAATAAAA                                                <  2:3152424/92‑1                                                                                                    GGAGGTGTGCGGTTCGATCGCACAGAGCTCCACCATCTCTGTAGTGAGTAAATAAAAAATACTTCAGAGTGTACCTGCAAAGGTTCACTGCGAAGTTTTG     <  2:932227/100‑1                                                                                                    GGAGGTCTGCGGTTCGATCCCGCATAGCTCCACCATCTCTGTAGTGATTAAATAAAAAATACTTCAGAGTGTACCTGCAAAGGTTCACTGCGAAGTTTTG     <  1:2450471/100‑1                                                                                                    GGAGGTCTGCGGTTCGATACCGCATAGCTCCACCATCTCTGTAGTGATTAAAAAAAAAATACTTCAGAGTGTACCTGCAAAGGTTCACTGCGAAGTTTTG     <  2:1409564/100‑1                                                                                                     GAGGTCTGCGGTTCGATCCCGCATAGCTCCACCATCTCTGTAGTGATTAAATAAAAAATACTTCAGAGTGTACCTGCAAAGGTTCACTGCGAAGTTTTGC    <  2:1515459/100‑1                                                                                                     GAGGTCTGCGGTTCGATCCCGCATAGCTCCACCATCTCTGTAGTGATTAAATAAAAAATACTTCAGAGTGTACCTGCAAAGGTTCACTGCGAAGTTTTGC    <  1:3032359/100‑1                                                                                                     GAGGTCTGCGGTTCGATCCCGCATAGCTCCACCATCTCTGTAGTGATTAAATAAAAAATACTTCAGAGTGTACCTGCAAAGGTTCACTGCGAAGTTTTGC    <  1:1211894/100‑1                                                                                                     GAGGTCTGCGGTTCGATCCCGCATAGCTCCACCATCTCTGTAGAAAAAAAAAAAAAAATACTTCAGAGTGTACCTGCAAAGGTTCACTGCGAAGTTTTGC    <  2:1446608/100‑1                                                                                                     GAGGTCTGCGGTTCGATCCCGAATAGCTCCACCATCTCTGTAGTGATTAAATAAAAAATACTTCAGAGTGTACCTGCAAAGGTTCACTGCGAAGTTTTGC    <  2:1410038/100‑1                                                                                                      AGGTCTGCGGTTCGATCCCGCATAGCTCCACCATCTCTGTAGTGATTAAATAAAAAATACTTCAGAGTGTACCTGCAAAGGTTCACTGCGAAGTTTTGCT   <  1:479902/100‑1                                                                                                      AGGTCTGCGGTTCGATCCCGCATAGCTCCACCATCTCTGTAGTGATTAAATAAAAAATACTTCAGAGTGTACCTGCAAAGGTTCACTGCGAAGTTTTGCT   <  1:3369367/100‑1                                                                                                      AGGTCTGCGGTTCGATCCCGCATAGCTCCACCATCTCTGTAGTGATTAAATAAAAAATACTTCAGAGTGTACCTGCAAAGGTTCACTGCGAAGTTTTGC    <  2:3256390/99‑1                                                                                                      AGGGCTGCGGTTCGTTCCCGCATAGATCGACCATCTCTGTAGTGATTAAATAAAGAATACTTCAGAGTGTACCTGCAAAGGTTCACTGCGAAGTTTTGC    <  2:1439326/99‑1                                                                                                       GGTCTGCGGTTCGATCCCGCATAGCTCCACCATCTCTGTAGTGATTAAATAAAAAATGCTACAGAGTATACCTGCAAAGGTTCACTGCGAAGTTTTGCTC  >  2:2903050/1‑100                                                                                                       GGTCTGCGGTTCGATCCCGCATAGCTCCACCATCTCTGTAGTGATTAAATAAAAAATACTTCAGAGTGTACCTGCAAAGGTTCACTGCGAAGTTTTGCTC  >  2:1745036/1‑100                                                                                                       GGTCTGCGGTTCGATCCCGCATAGCTCCACCATCTCTGTAGTGATTAAATAAAAAATACTTCAGAGTGTACCTGCAAAGGTTCACTGCGAAGTTTTGCTC  <  1:68846/100‑1                                                                                                       GGTCTGCGGTTCGATCCCGCATAGCTCCACCATCTCTGTAGTGATTAAATAAAAAATACTTCAGAGTGTACCTGCAAAGGTTCACTGCGAAGTTTTGCTC  >  1:2622350/1‑100                                                                                                       GGTCTGCGGTTCGATCCCGCATAGCTCCACCATCTCTGTAGTGATTAAATAAAAAATACTTCAGAGTGTACCTGCAAAGGTTCACTGCGAAGTTTTGCTC  >  1:1545661/1‑100                                                                                                                                                                                                            ATTTTCAGCTTGATCCAGATTTTTAAAGAGCAAAACTTCGCAGTGAACCTTTGCAGGTACACTCTGAAGTATTTTTTATTTAATCACTACAGAGATGGTGGAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/3426863‑3426965 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggagGTCTGCGGTTCGATCCCGCATAGCTCCACCATCTCTGTAGTGATTAAATAAAAAATACTTCAGAGTGTACCTGCAAAGGTTCACTGCGAAGTTTTGCTC  <  NC_000913/3426988‑3426890

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.