| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 50327 = | NA (NA) | 7 (0.050) | 6/164 | NT | NA | noncoding (1/37 nt) | REP5 (repetitive extragenic palindromic) element; contains 1 REP sequences | REP5 (repetitive extragenic palindromic) element; contains 1 REP sequences |
| ? | NC_000913 | 50360 = | NA (NA) | noncoding (34/37 nt) | REP5 (repetitive extragenic palindromic) element; contains 1 REP sequences | REP5 (repetitive extragenic palindromic) element; contains 1 REP sequences | |||||
TTGTCCAGCCGTCGAACCGGCATAAGGATTTGGGCGAAGCGGCGGCGTCTTAAACACAGCCTGATATAGGAAGGCCGGATAAGACGCGACCGGCGTCGCATCCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/50432‑50327‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atccggcCTTCCTATATCAGGCTGTGTTTAAGACGCCGCCGCTTCGCCCAAATCCTTATGCCGGTTCGACGGCTGGACAAAATACTGTTTATCTTCCCAGCGCAGG > NC_000913/50360‑50458 TTGTCCAGCCGTCGAACCGGCATAAGGATTTGGGCGAAGCGGCGGCGTCTTAAACACAGCCTGATATAGGAAGGCCGGATAAGACGCGACCGGCGTCGCA < 1:493590/100‑1 GTCCAGCCGTCGAACCGGCATAAGGATTTGGGCGAAGCGGCGGCGTCTTAAACACAGCCTGATATAGGAATGCCGGATAAGACGCGACCGGCGTCGCATC > 1:1846124/1‑100 GTCCAGCCGTCGAACCGGCATAAGGATTTGGGCGAAGCGGCGGCGTCTTAAACACAGCCTGATATAGGAAGGCCGGATAAGACGCGACCGGCGTCGCATC > 2:964255/1‑100 GTCCAGCCGTCGAACCGGCATAAGGATTTGGGCGAAGCGGCGGCGTCTTAAACACAGCCTGATATAGGAAGGCCGGATAAGACGCGACCGGCGTCGCATC > 1:1884508/1‑100 CAGCCGTCGAACCGGCATAAGGATTTGGGCGAAGCGGCGGCGTCTTAAACACAGCCTGATATAGGAAGGCCGGATAAGACGCGACCGGCGTCGCATCCGG > 2:1727418/1‑100 CAGCCGTCGAACCGGCATAAGGATTTGGGCGAAGCGGCGGCGTCTTAAACACAGCCTGATATAGGAAGGCCGGATAAGACGCGACCGGCGTCGCATCCGG > 1:876434/1‑100 CAGCCGTCGAACCGGCATAAGGATTTGGGCGAAGCGGCGGCGTCTTAAACACAGCCTGATATAGGAAGGCCGGATAAGACGCGACCGGCGTCGCATCCGG < 1:2335786/100‑1 CAGCCGTCGAACCGGCATAAGGATTTGGGCGAAGCGGCGGCGTCTTAAACACAGCCTGATATAGGAAGGCCGGATAAGACGCGACCGGCGTCGCATCCGG < 1:2336200/100‑1 CAGCCGTCGAACCGGCATAAGGATTTGGGCGAAGCGGCGGCGTCTTAAACACAGCCTGATATAGGAAGGCCGGATAAGACGCGACCGGCGTCGCATCCGG > 1:1514077/1‑100 CAGCCGTCGAACCGGCATAAGGATTTGGGCGAAGCGGCGGCGTCTTAAACACAGCCTGATATAGGAAGGCCGGATAAGACGCGACCGGCGTCGCATCCGG > 1:3122219/1‑100 CAGCCGTCGAACCGGCATAAGGATTTGGGCGAAGCGGCGGCGTCTTAAACACAGCCTGATATAGGAAGGCCGGATAAGACGCGACCGGCGTCGCATCCGG > 1:3477168/1‑100 AGCCGTCGAACCGGCATAAGGATTTGGGCGAAGCGGCGGCGTCTTAAACACAGCCTGATATAGGAAGGCCGGATAAGACGCGACCGGCGTCGCATCCGGC < 1:3737748/100‑1 GGCCGGATAAGACGCGACCGGCGTCGCATCCGGCCTTCCTATAACAGGCTGCGTTTAAGACGCCGCCGCTTCGCCGAAATCCTTATGCCGGTTCGCCGGC > 2:3796174/1‑100 CCGGATAAGACGCGACCGGCGTCGCATCCGGCCTTCCTATATCAGGCTGTGTTTAAGACGCCGCCGCTTCGCCCAAATCCTTATGCCGGTTCGACGGCTG > 1:463554/1‑100 CGGATAAGACGCGACCGGCGTCGCATCCGGCCTTCCTATATCAGGCTGTGTTTAAGACGCCGCCGCTTCGCCCAAATCCTTATGCCGGTTCGACGGCTGG > 1:1884146/1‑100 CGGATAAGACGCGACCGGCGTCGCATCCGGCCTTCCTATATCAGGCTGTGTTTAAGACGCCGCCGCTTCGCCCAAATCCTTATGCCGGTTCGACGGCTGG > 1:667584/1‑100 GGATAAGACGCGACCGGCGTCGCATCCGGCCTTCCTATATCAGGCTGTGTTTAAGACGCCGCCGCTTCGCCCAAATCCTTATGCCGGTTCGACGGCTGGA > 1:1274340/1‑100 GATAAGACGCGACCGGCGTCTTATCCGGCCTTCCTATATCAGGCTGTGTTTAAGACGCCGCCGCTTCGCCCCAATCCTTATGCCGGTTCGACGGCTGGAC > 2:3881602/1‑100 CGACCGGCGTCGCATCCGGCCTTCCTATATCAGGCTGTGTTTAAGACGCCGCCGCTTCGCCCAAATCCTTATGCCGGTTCGACGGCTGGACAAAATACTG > 2:4019035/1‑100 ATCCGGCCTTCCTATATCAGGCTGTGTTTAAGACGCCGCCGCTTCGCCCAAATCCTTATGCCGGTTCGACGGCTGGACAAAATACTGTTTATCTTCCCAG > 2:3775380/1‑100 ATCCGGCCTTCCTATATCAGGCTGTGTTTAAGACGCCGCCGCTTCGCCCAAATCCTTATGCCGGTTCGACGGCTGGACAAAATACTGGTTATCTTCCCAG < 1:2713571/100‑1 ATCCGGCCTTCCTATATCAGGCTGTGTTTAAGACGCCGCCGCTTCGCCCAAATCCCTATGCCGGTTCGACGGCTGGACAAAATACTGTTTATCTTCCCAG < 2:3614193/100‑1 TCCGGCCTTCCTATATCAGGCTGTGTTTAAGACGCCGCCGCTTCGCCCAAATCCTTATGCCGGTTCGACGGCTGGACAAAATACTGTTTATCTTCCCAGC > 2:590941/1‑100 TCCGGCCTTCCTATATCAGGCTGTGTTTAAGACGCCGCCGCTTCGCCCAAATCCTTATGCCGGTTCGACGGCTGGACAAAATACTGTTTATCTTCCCAGC > 1:2243463/1‑100 CCGGCCTTCCTATATCAGGCTGTGTTTAAGACGCCGCCGCTTCGCCCAAATCCTTATGCCGGTTCGACGGCTGGACAAAATACTGTTTATCTTCCCAGCG < 2:2996901/100‑1 CCGGCCTTCCTATATCAGGCTGTGTTTAAGACGCCGCCGCTTCGCCCAAATCCTTATGCCGGTTCGACGGCTGGACAAAATACTGTTTATCTTCCCAGCG > 2:2941129/1‑100 CCGGCCTTCCTATATCAGGCTGTGTTTAAGACGCCGCCGCTTCGCCCAAATCCTTATGCCGGTTCGACGGCTGGACAAAATACTGTTTATCTTCCCAGCG < 1:196258/100‑1 CCGGCCTTCCTATATCAGGCTGTGTTTAAGACGCCGCCGCTTCGCCCAAATCCTTATGCCGGTTCGACGGCTGGACAAAATACTGTTTATCTTCCCAGCG > 1:537471/1‑100 CGGCCTTCCTATATCAGGCTGTGTTTAAGACGCCGCCGCTTCGCCCAAATCCTTATGCCGGTTCGACGGCTGGACAAAATACTGTTTATCTTCCCAGCGC > 1:740342/1‑100 CGGCCTTCCTATATCAGGCTGTGTTTAAGACGCCGCCGCTTCGCCCAAATCCTTATGCCGGTTCGACGGCTGGACAAAATACTGTTTATCTTCCCAGCGC < 1:3407804/100‑1 GGCCTTCCTATATCAGGCTGTGTTTAAGACGCCGCCGCTTCGCCCAAATCCTTATGCCGGTTCGACGGCTGGACAAAATACTGTTTATCTTCCCAGCGCA < 2:3542547/100‑1 GGCCTTCCTATATCAGGCTGTGTTTAAGACGCCGCCGCTTCGCCCAAATCCTTATGCCGGTTCGACGGCTGGACAAAATACTGTTTATCTTCCCAGCGCA < 1:1659852/100‑1 GCCTTCCTATATCAGGCTGTGTTTAAGACGCCGCCGCTTCGCCCAAATCCTTATGCCGGTTCGACGGCTGGACAAAATACTGTTTATCTTCCCAGCGCAG < 2:1382279/100‑1 GCCTTCCTATATCAGGCTGTGTTTAAGACGCCGCCGCTTCGCCCAAATCCTTATGCCGGTTCGACGGCTGGACAAAATACTGTTTATCTTCCCAGCGCAG < 2:4014974/100‑1 CCTTCCTATATCAGGCTGTGTTTAAGACGCCGCCGCTTCGCCCAAATCCTTATGCCGGTTCGACGGCTGGACAAAATACTGTTTATCTTCCCAGCGCAGG > 1:401730/1‑100 CCTTCCTATATCAGGCTGTGTTTAAGACGCCGCCGCTTCGCCCAAATCCTTATGCCGGTTCGACGGCTGGACAAAATACTGTTTATCTTCCCAGCGCAGG > 1:1872122/1‑100 TTGTCCAGCCGTCGAACCGGCATAAGGATTTGGGCGAAGCGGCGGCGTCTTAAACACAGCCTGATATAGGAAGGCCGGATAAGACGCGACCGGCGTCGCATCCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/50432‑50327‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atccggcCTTCCTATATCAGGCTGTGTTTAAGACGCCGCCGCTTCGCCCAAATCCTTATGCCGGTTCGACGGCTGGACAAAATACTGTTTATCTTCCCAGCGCAGG > NC_000913/50360‑50458 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |