New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 20668320 (0.000)30 (0.230) 7/160 NT 100% noncoding (522/1195 nt) IS5 repeat region
?NC_000913 = 2066857 NA (NA)noncoding (497/1195 nt) IS5 repeat region

Only 100 of 102 total aligned reads displayed.

GCCTTCATGCCAAAGTGCCACTGATTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTCGAGCTGGGTGCCTCAATGATGGTGGCATCGACCAAGGTGCCTTGAGTCATCATGACGCCTGCTTCGGCCAGCCAGCGATTGATGGTCTTGAACAATT  >  NC_000913/2066750‑2066927
                                                                                  |                                                                                               
gCCTTCATGCCAAAGTGCCACTGATTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTCGAtgccaccatcattgagg                                                                                >  2:2191932‑M1/1‑83 (MQ=255)
          cAAAGTGCCACTGATTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTCGAtgccaccatcattgaggcacccagctc                                                                      >  2:2850850‑M1/1‑73 (MQ=255)
               tGCCACTGATTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTCGAtgccaccatcattgaggcacccagctcgacca                                                                 <  2:19340‑M1/100‑33 (MQ=255)
                 ccACTGATTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTCGAtgccaccatcattgaggcacccagctcgaccaag                                                               <  1:2191945‑M1/100‑35 (MQ=255)
                 ccACTGATTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTCGAtgccaccatcattgaggcacccagctcgaccaag                                                               <  1:3454214‑M1/100‑35 (MQ=255)
                 ccACTGATTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTCGAtgccaccatcattgaggcacccagctcgaccaag                                                               <  1:3555432‑M1/100‑35 (MQ=255)
                 ccACTGATTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTCGAtgccaccatcattgaggcacccagctcgaccaag                                                               <  1:4036199‑M1/100‑35 (MQ=255)
                 ccACTGATTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTCGAtgccaccatcattgaggcacccagctcgaccaag                                                               <  1:2398466‑M1/100‑35 (MQ=255)
                 ccACTGATTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTCGAtgccaccatcattgaggcacccagctcgaccaag                                                               <  2:1997025‑M1/100‑35 (MQ=255)
                 ccACTGATTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTCGAtgccaccatcattgaggcacccagctcgaccaag                                                               <  2:867103‑M1/100‑35 (MQ=255)
                 ccACTGATTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTCGAtgccaccatcattgaggcacccagctcgaccaag                                                               <  2:1261808‑M1/100‑35 (MQ=255)
                 ccACTGATTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTCGCTGCTCTTTGTTCTTGGTCGAtgccaccatcattgaggcacccagctcgaccaag                                                               <  1:3507114‑M1/100‑35 (MQ=255)
                  cACTGATTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTCGAtgccaccatcattgaggcacccagctcgaccaaga                                                              <  1:4115310‑M1/100‑36 (MQ=255)
                  cACTGATTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTCGAtgccaccatcattgaggcacccagctcgaccaaga                                                              <  2:1086958‑M1/100‑36 (MQ=255)
                  cACTGATTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTCGAtgccaccatcattgaggcacccagctcgaccaaga                                                              <  1:2850866‑M1/100‑36 (MQ=255)
                  cACTGATTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTCGAtgccaccatcattgaggcacccagctcgaccaaga                                                              <  1:1444651‑M1/100‑36 (MQ=255)
                   aCTGATTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTCGAtgccaccatcattgaggcacccagctcgaccaagaa                                                             <  1:2692987‑M1/100‑37 (MQ=255)
                   aCTGATTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTCGAtgccaccatcattgaggcacccagctcgaccaagaa                                                             <  2:2927249‑M1/100‑37 (MQ=255)
                    cTGCTTGCCTTTCTTGGTCTGATGCATCTCCGGATCGGGTTGCTGCTCTTTGTTCTTGGTCGAtgccaccatcattgaggcacccagctcgaccaagaac                                                            <  2:2478669‑M1/100‑38 (MQ=255)
                    cTGATTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTCGAtgccaccatcattgaggcacccagctcgaccaagaac                                                            <  2:3471359‑M1/100‑38 (MQ=255)
                    cTGATTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTCGAtgccaccatcattgaggcacccagctcgaccaagaac                                                            <  1:2605841‑M1/100‑38 (MQ=255)
                    cTGATTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTCGAtgccaccatcattgaggcacccagctcgaccaagaac                                                            <  2:3162132‑M1/100‑38 (MQ=255)
                    cTGATTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTCGAtgccaccatcattgaggcacccagctcgaccaagaac                                                            <  1:1349849‑M1/100‑38 (MQ=255)
                    cTGATTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTCGAtgccaccatcattgaggcacccagctcgaccaagaac                                                            <  1:3576764‑M1/100‑38 (MQ=255)
                    cTGATTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTCGAtgccaccatcattgaggcacccagctcgaccaagaac                                                            <  1:405056‑M1/100‑38 (MQ=255)
                    cTGATTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTCGAtgccaccatcattgaggcacccagctcgaccaagaac                                                            <  1:166666‑M1/100‑38 (MQ=255)
                    cTGATTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTCCTTGGTCGAtgccaccatcattgaggcacccagctcgaccaagaac                                                            <  1:1930253‑M1/100‑38 (MQ=255)
                     tGATTGCCTTTCTTGGTCTGATTCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTCGAtgccaccatcattgaggcacccagctcgaccaagaac                                                            <  2:2239980‑M1/99‑38 (MQ=255)
                      gATTGCCTTTCTTGGTCTGATGCATCTCCGGTTCGCGTTGCTGCGCTTTGTTCTGGGTCGAtgcccccatcattgaggcacccagctcgaccgaggtga                                                           <  2:30071‑M1/99‑39 (MQ=255)
                                                                       caacttgGTCGAtgccactatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcag         >  2:2830484‑M1/4‑12 (MQ=255)
                                                                        acgatggtggatgccagcatcattgaggcaccaagcgcgagcaagaacaaagagcagcaacgagatccggagatgcatcagaccaagaaaggcaatcag         <  2:257466‑M1/95‑89 (MQ=255)
                                                                          cgtggTAGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtgg      <  2:3591836‑M1/98‑92 (MQ=255)
                                                                          cTTGGTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtgg      >  1:4088180‑M1/1‑9 (MQ=255)
                                                                          cTTGGTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtgg      <  1:1098254‑M1/100‑92 (MQ=255)
                                                                          cTTGGTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtgg      >  2:1670565‑M1/1‑9 (MQ=255)
                                                                          cTTGGTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtgg      <  2:474455‑M1/100‑92 (MQ=255)
                                                                          cTTGGTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtgg      <  2:2162605‑M1/100‑92 (MQ=255)
                                                                          cTTGGTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtgg      <  1:1808806‑M1/100‑92 (MQ=255)
                                                                          cTTGGTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtgg      >  1:4091160‑M1/1‑9 (MQ=255)
                                                                          cTTGGTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtgg      <  1:3434890‑M1/100‑92 (MQ=255)
                                                                          cTTGGTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtgg      <  2:3132457‑M1/100‑92 (MQ=255)
                                                                          cTTGGTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtgg      <  1:3121492‑M1/100‑92 (MQ=255)
                                                                          cTTGGTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtgg      >  1:3157040‑M1/1‑9 (MQ=255)
                                                                          cTTGGTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtgg      >  1:3182290‑M1/1‑9 (MQ=255)
                                                                          cTTGGTCGAtgccaccatcattgaggcacccagctagaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatc           <  2:79822‑M1/95‑87 (MQ=255)
                                                                          cTTGGTCGAtgccaccatcatggaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtgg      <  2:488845‑M1/100‑92 (MQ=255)
                                                                           ttGGTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggc     <  2:237913‑M1/100‑93 (MQ=255)
                                                                           ttGGTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggc     >  2:3638533‑M1/1‑8 (MQ=255)
                                                                           ttGGTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggc     >  2:4092894‑M1/1‑8 (MQ=255)
                                                                           ttGGTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggc     <  2:3061438‑M1/100‑93 (MQ=255)
                                                                           ttGGTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggc     <  2:1554604‑M1/100‑93 (MQ=255)
                                                                           ttGGTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggc     <  2:9295‑M1/100‑93 (MQ=255)
                                                                           ttGGTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggc     <  1:3349763‑M1/100‑93 (MQ=255)
                                                                           ttGGTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggc     <  2:1074261‑M1/100‑93 (MQ=255)
                                                                           ttGGTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggc     >  1:3378649‑M1/1‑8 (MQ=255)
                                                                           ttGGTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggc     <  1:2028801‑M1/100‑93 (MQ=255)
                                                                           ttGGTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggc     >  2:1190655‑M1/1‑8 (MQ=255)
                                                                           ttGGTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggc     <  1:1139464‑M1/100‑93 (MQ=255)
                                                                           ttGGTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggc     <  1:865626‑M1/100‑93 (MQ=255)
                                                                           ttGGTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggc     <  1:1688652‑M1/100‑93 (MQ=255)
                                                                           ttGGTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggc     >  1:4088210‑M1/1‑8 (MQ=255)
                                                                           ttGGTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggc     <  1:4096810‑M1/100‑93 (MQ=255)
                                                                           ttGGTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcaatccggagatgcatcagaccaagaaaggcaatcagtg       >  2:4092941‑M1/1‑8 (MQ=255)
                                                                           ttGGTCGAtgccaccatcattgaggcacccagcgcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggc     <  2:584393‑M1/100‑93 (MQ=255)
                                                                            tGGTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggca    >  1:134859‑M1/1‑7 (MQ=255)
                                                                            tGGTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggca    >  2:2953081‑M1/1‑7 (MQ=255)
                                                                            tGGTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggca    <  2:2601897‑M1/100‑94 (MQ=255)
                                                                            tGGTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggca    >  2:1376936‑M1/1‑7 (MQ=255)
                                                                            tGGTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggca    >  2:1412143‑M1/1‑7 (MQ=255)
                                                                             ggTCGAtgccaccatcattgaggcacccagttcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcac   >  1:3463310‑M1/1‑6 (MQ=255)
                                                                             ggTCGAtgccaccatcattgaggcacccagttcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcac   >  1:3467051‑M1/1‑6 (MQ=255)
                                                                             ggTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggcgatgcatcagaccaagaaaggcaatcagtggcac   >  1:3236665‑M1/1‑6 (MQ=255)
                                                                             ggTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcac   <  1:647675‑M1/100‑95 (MQ=255)
                                                                             ggTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcac   >  2:2705557‑M1/1‑6 (MQ=255)
                                                                             ggTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcac   >  2:1365646‑M1/1‑6 (MQ=255)
                                                                             ggTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggc     >  2:238651‑M1/1‑6 (MQ=255)
                                                                              ntcGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcact  >  2:377518‑M1/2‑5 (MQ=255)
                                                                              gTCGAtgccaccatcattgaggcacccaggtcgaccaagaacaaagagcggcaacgcgatccggagatgcatccgaccaagaaaggcaatcagtggcac   >  2:1260129‑M1/1‑5 (MQ=255)
                                                                              gTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatccgtggcact  >  1:435029‑M1/1‑5 (MQ=255)
                                                                              gTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcact  >  1:2133159‑M1/1‑5 (MQ=255)
                                                                              gTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcact  >  2:3498893‑M1/1‑5 (MQ=255)
                                                                              gTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcact  >  1:1005869‑M1/1‑5 (MQ=255)
                                                                              gTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcact  >  2:3955436‑M1/1‑5 (MQ=255)
                                                                              gTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcact  <  1:1479642‑M1/100‑96 (MQ=255)
                                                                              gTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcact  >  2:735496‑M1/1‑5 (MQ=255)
                                                                              gTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcact  >  1:2601947‑M1/1‑5 (MQ=255)
                                                                              gTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcact  >  1:3023492‑M1/1‑5 (MQ=255)
                                                                              gTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcact  >  1:3029872‑M1/1‑5 (MQ=255)
                                                                              gTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcact  >  2:2753121‑M1/1‑5 (MQ=255)
                                                                              gTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcact  >  1:3604516‑M1/1‑5 (MQ=255)
                                                                              gTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcact  >  1:4035691‑M1/1‑5 (MQ=255)
                                                                              gTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcact  >  2:2387299‑M1/1‑5 (MQ=255)
                                                                              gTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcact  >  1:4084167‑M1/1‑5 (MQ=255)
                                                                              gTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcact  >  2:23769‑M1/1‑5 (MQ=255)
                                                                              gTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcact  >  2:2283154‑M1/1‑5 (MQ=255)
                                                                              gTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcact  >  1:539516‑M1/1‑5 (MQ=255)
                                                                              gTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcact  >  1:939016‑M1/1‑5 (MQ=255)
                                                                              gTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggc     <  1:2030882‑M1/97‑93 (MQ=255)
                                                                              gTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatccatcagcccaagaacggcaataagtcgcact  >  2:1627892‑M1/1‑5 (MQ=255)
                                                                              gTCGAtgccaccaacattgaggcacacagctcgaccaagaacaaagcgcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcact  >  2:2557916‑M1/1‑5 (MQ=255)
                                                                                  |                                                                                               
GCCTTCATGCCAAAGTGCCACTGATTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTCGAGCTGGGTGCCTCAATGATGGTGGCATCGACCAAGGTGCCTTGAGTCATCATGACGCCTGCTTCGGCCAGCCAGCGATTGATGGTCTTGAACAATT  >  NC_000913/2066750‑2066927

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.