New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 2430980NA (NA)8 (0.060) 5/164 NT NA noncoding (52/84 nt) REP169 (repetitive extragenic palindromic) element; contains 2 REP sequences REP169 (repetitive extragenic palindromic) element; contains 2 REP sequences
?NC_000913 = 2431012 NA (NA)noncoding (84/84 nt) REP169 (repetitive extragenic palindromic) element; contains 2 REP sequences REP169 (repetitive extragenic palindromic) element; contains 2 REP sequences

Only 100 of 184 total aligned reads displayed.

TTCAACGCCATCGACTTTTTATGCCTTTGCGGCATCGGGCAATGCGTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACGCCACTTAAGCCAGAAAGTTGCTTCAACTCA  >  NC_000913/2430882‑2431079
                                                                                                  |                                                                                                   
ttCAACGCCATCGACTTTTTATGCCTTTGCGGCATCGGGCAATGCGTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTCTACCCCTGCGTAGg                                                                                                    <  2:1084401‑M1/100‑2 (MQ=255)
  cAACGCCATCGACTTTTTATGCCTTTGCGGCATCGGGCAATGCGTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTCTACCCCTGCGTAGgcc                                                                                                  <  1:3044868‑M1/100‑4 (MQ=255)
   aaCGCCATCGACTTTTTATGCCTTTGCGGCATCGGGCAATGCGTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTCTACCCCTGCGTAGgcct                                                                                                 <  2:1113154‑M1/100‑5 (MQ=255)
   aaCGCCATCGACTTTTTATGCCTTTGCGGCATCGGGCAATGCGTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTCTACCCCTGCGTAGgcct                                                                                                 <  2:2566080‑M1/100‑5 (MQ=255)
   aaCGCCATCGACTTTTTATGCCTTTGCGGCATCGGGCAATGCGTGTCGGATGCGGCCTAAACGCCTTATCCGACCTACGGTTCTACCCCTGCGTAGgcc                                                                                                  >  2:1242774‑M1/1‑96 (MQ=255)
    aCGCCATCGACTTTTTATGCCTTTGCGGCATCGGGCAATGCGTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTCTACCCCTGCGTAGgcctg                                                                                                <  2:1515302‑M1/100‑6 (MQ=255)
    aCGCCATCGACTTTTTATGCCTTTGCGGCATCGGGCAATGCGTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTCTACCCCTGCGTAGgcctg                                                                                                <  1:1674070‑M1/100‑6 (MQ=255)
     cGCCATCGACTTTTTATGCCTTTGCGGCATCGGGCAATGCGTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTCTACCCCTGCGTAGgcctg                                                                                                <  2:3702306‑M1/99‑6 (MQ=255)
      gCCATCGACTTTTTATGCCTTTGCGGCATCGGGCAATGCGTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTCTACCCCTGCGTAGgcctgat                                                                                              <  2:1263690‑M1/100‑8 (MQ=255)
       ccATCGACTTTTTATGCCTTTGCGGCATCGGGCAATGCGTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTCTACCCCTGCGTAGGCCTGATa                                                                                             <  2:2272120/100‑1 (MQ=255)
       ccATCGACTTTTTATGCCTTTGCGGCATCGGGCAATGCGTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTCTACCCCTGCGTAGGCCTGATa                                                                                             <  1:162989/100‑1 (MQ=255)
        cATCGACTTTTTATGCCTTTGCGGCATCGGGCAATGCGTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTCTACCCCTGCGTAGGCCTGATaa                                                                                            >  1:3339666/1‑100 (MQ=255)
         aTCGACTTTTTATGCCTTTGCGGCATCGGGCAATGCGTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTCTACCCCTGCGTAGGCCTGATaa                                                                                            >  2:542534/1‑99 (MQ=255)
          tCGACTTTTTATGCCTTTGCGGCATCGGGCAATGCGTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTCTACCCCTGCGTAGGCCTGATAAGa                                                                                          <  2:839464/100‑1 (MQ=255)
           cgacggtttATGCCTTTGCGGCATCGGGCAATGCGTGTCGGAGGCGGCGGAAACGCCTTATCCGACCTACGGTTCTACCCCTGCGTAGGCCTGATAAGa                                                                                          <  2:3927698/93‑1 (MQ=38)
           cGACTTTTTATGCCTTTGCGGCATCGGGCAATGCGTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTCTACCCCTGCGTAGGCCTGATAAGAc                                                                                         <  2:242277/100‑1 (MQ=255)
           cGACTTTTTATGCCTTTGCGGCATCGGGCAATGCGTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTCTACCCCTGCGTAGGCCTGATAAGAc                                                                                         >  1:3368770/1‑100 (MQ=255)
             aCTTTTTATGCCTTTGCGGCATCGGGCAATGCGTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTCTACCCCTGCGTAGGCCTGATAAGAcgc                                                                                       >  2:2236899/1‑100 (MQ=255)
              cTTTTTATGCCTTTGCGGCATCGGGCAATGCGTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTCTACCCCTGCGTAGGCCTGATAAGAcgcg                                                                                      <  1:1362796/100‑1 (MQ=255)
               tttttATGCCTTTGCGGCATCGGACAATGCATGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTCTACCCCTGCGTAGCCCTGATAACACacgc                                                                                     >  2:1884673/1‑100 (MQ=37)
                  ttATGCCTTTGCGGCATCGGGCAATGCGTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTCTACCCCTGCGTCGGCCTGATAAGACGCGCCa                                                                                   >  2:1148553/1‑99 (MQ=255)
                     tGCCTTTGCGGCATCGGGCAATGCGTGTCGGATGCGGCGTAAACGCATTATCAGACCTACGGATCTACACCTGCGAAGGCCTGATAAGACGCGCCAGCgg                                                                               >  1:318070/1‑99 (MQ=38)
                     ngCCTTTGCGGCATCGGGCAATGCGTGTCGGATGCGGCGTAAACGCCTTATCAGACCTACGGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGc                                                                                 >  2:472928/2‑98 (MQ=255)
                      gCCTTTGCGGCATCGGGCAATGCGTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTc                                                                              <  2:2760402/100‑1 (MQ=255)
                       ccTTTGCGGCATCGGGCAATGCGTGTCGGATGCGGCGTAAACGCCTTATCCGACGTACGGTTCTGCCCCTGCGTAGGCCTGATAAAACGCGCCAGCGt                                                                               >  2:852917/1‑98 (MQ=255)
                         tttGCGGCATCGGGCAATGCGTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTCTACCCCTGCGTAGgcctgatgcgacgctggcgcgtctta                                                                           <  1:1974748‑M1/100‑27 (MQ=255)
                           tGCGGCATCGGGCAATGCGTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATC                                                                         >  2:3841063‑M2/1‑100 (MQ=255)
                            gCGGCATCGGGCAATGCGTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCA                                                                        >  1:1137537‑M2/1‑100 (MQ=255)
                             nggcATCGGGCAATGCGTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAG                                                                       <  2:3976897‑M2/99‑1 (MQ=255)
                             cGGCATCGGGCAATGCGTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAG                                                                       >  2:3606804‑M2/1‑100 (MQ=255)
                              ggCATCGGGCAATGCGTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTCTACCCCTGCGTAGgcctgatgcgacgctggcgcgttttatcagg                                                                      <  2:1312500‑M1/100‑32 (MQ=255)
                              ggCATCGGGCAATGCGTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTCTACCCCTGCGTAGgcctgatgcgacgctggcgcgtcttatcagg                                                                      <  1:3118350‑M1/100‑32 (MQ=255)
                              ggCATCGGGCAATGCGTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTCTACCCCTGCGTAGgcctgatgcgacgctggcgcgtcttatcagg                                                                      <  1:862050‑M1/100‑32 (MQ=255)
                              ggCATCGGGCAATGCGTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGG                                                                      <  1:1579606‑M2/100‑1 (MQ=255)
                               gCATCGGGCAATGCGTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGC                                                                     <  1:3030057‑M2/100‑1 (MQ=255)
                                cATCGGGCAATGCGTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTCTACCCCTGCGTAGgcctgatgcgacgctggcgcgtcttatcaggcc                                                                    <  1:1614873‑M1/100‑34 (MQ=255)
                                cATCGGGCAATGCGTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCa                                                                    <  2:3368750/100‑1 (MQ=255)
                                cATCGGGCAATGCGTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCa                                                                    <  1:1508874/100‑1 (MQ=255)
                                cATCGGGCAATGCGTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCa                                                                    <  2:2358752/100‑1 (MQ=255)
                                  tCGGGCAATGCGTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTCTACCCCTGCGTAGgcctgatgcgacgctggcgcgtcttatcaggccta                                                                  <  2:2072126‑M1/100‑36 (MQ=255)
                                  tCGGGCAATGCGTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCa                                                                    <  2:2509460/98‑1 (MQ=255)
                                  tCGGGCAATGCGTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAg                                                                  <  1:2195069/100‑1 (MQ=255)
                                    gggCAATGCGTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGAc                                                                >  1:932534/1‑100 (MQ=255)
                                    gggCAATGCGTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGAc                                                                <  2:1416754/100‑1 (MQ=255)
                                      gCAATGCGTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCg                                                              <  2:3434344/100‑1 (MQ=255)
                                        aaTGCGTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTa                                                            <  1:2655925/100‑1 (MQ=255)
                                        aaTGCGTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTa                                                            <  1:2975921/100‑1 (MQ=255)
                                          tGCGTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTAtt                                                          <  1:239051/100‑1 (MQ=255)
                                          tGCGTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTAtt                                                          <  1:2370265/100‑1 (MQ=255)
                                          tGCGTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTAtt                                                          <  1:3472528/100‑1 (MQ=255)
                                          tGCGTGGCGGATGCGGCGTAAACGCCTTCTACGATCTACGGTTCTAGCGATGAGTAGGCGTGCTAAGACGCGCCTGGGTGGCATTAGGCAAGACCGTAtt                                                          >  2:395297/1‑100 (MQ=16)
                                             gtgtCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAAt                                                       <  1:2033776/100‑1 (MQ=255)
                                              tgtCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCCGCGTCGCATCAGGCAAGACCGTATTAAtt                                                      >  2:1786452/1‑100 (MQ=255)
                                               gtCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTc                                                     >  1:629237/1‑100 (MQ=255)
                                               gtCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTc                                                     >  2:305364/1‑100 (MQ=255)
                                               gtCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTc                                                     >  1:3472643/1‑100 (MQ=255)
                                                 cGGATGCTGCGGAAACGACTTATCCGACCTACGGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAAt                                                       <  2:2865668/96‑1 (MQ=255)
                                                 cGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCgg                                                   <  2:2387581/100‑1 (MQ=255)
                                                   gATGCGGCGTAAACGCCTTATCCGACCTACGGTTCTACCCCTGCGTAGGCCTGATAAGTCGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCgg                                                   <  2:4031489/98‑1 (MQ=255)
                                                   gATGCGGCGTAAACGCCTTATCCGACCTACGGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCg                                                 <  2:1183216/100‑1 (MQ=255)
                                                   gATGCGGCGTAAACGCCTTAGCCGACCTACGGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCg                                                 <  1:2472605/100‑1 (MQ=255)
                                                    aTGCTGCGTAAACGCCTTATCCGACCTACGGTTCTGCCCCTGCGGAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGt                                                <  2:2666567/100‑1 (MQ=255)
                                                      gcggcgTAAACGCCTTATCCGACCTACGGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGtat                                              >  2:2373212/1‑100 (MQ=255)
                                                       cggcgTAAACGCCTTATCCGACCTACGGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGtata                                             >  1:2264687/1‑100 (MQ=255)
                                                       cggcgTAAACGCCTTATCCGACCTACGGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGtata                                             >  1:970088/1‑100 (MQ=255)
                                                       cggcgTAAACGCCTTATCCGACCTACGGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGtata                                             <  1:17404/100‑1 (MQ=255)
                                                       cggcgTAAACGCCTTATCCGACCTACGGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGtata                                             >  1:834067/1‑100 (MQ=255)
                                                        ggcgTAAACGCCTTATCCGACCTACGGTTCTACCCCTGCGTAGGGCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAg                                            >  2:688828/1‑100 (MQ=255)
                                                        ggcgTAAACGCCTTATCCGACCTACGGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGtata                                             <  2:525395/99‑1 (MQ=255)
                                                        ggcgTAAACGCCTTATCCGACCTACGGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAg                                            >  2:2802811/1‑100 (MQ=255)
                                                          cgTAAACGCCTTATCCGACCTACGGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGcc                                          >  1:1470176/1‑100 (MQ=255)
                                                           gTAAACGCCTTATCCGACCTACGGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGccc                                         <  1:448160/100‑1 (MQ=255)
                                                            tAAACGCCTTATCCGACCTACGGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCa                                        <  1:538849/100‑1 (MQ=255)
                                                               aCGCCTTATCCGACCTACGGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTa                                     <  2:3405259/100‑1 (MQ=255)
                                                                ctccTTATCCGACCTACGGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGGCCGTATTAATTCGGCGTATAGCCCATTAc                                    <  2:632530/98‑1 (MQ=255)
                                                                cGCCTTATCCGACCTACGGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTAc                                    >  1:341335/1‑100 (MQ=255)
                                                                    ttATCCGACCTACGGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCACTACCACg                                <  2:2161419/100‑1 (MQ=255)
                                                                     tATCCGACCTACGGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACGc                               >  1:3851210/1‑100 (MQ=255)
                                                                         cgcccTCCGGTTCTACCCCTGCGTAGGCTTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACGCCAc                            <  2:1347085/96‑1 (MQ=255)
                                                                             cTACGGTTCTTCCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTACTTCGGCGTATAGCCCATTACCACGCCACTTAAg                       <  2:2708045/100‑1 (MQ=255)
                                                                             cTACGGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACGCCACTTAAg                       <  2:3811878/100‑1 (MQ=255)
                                                                             cTACGGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACGCCACTTAAg                       >  1:1296964/1‑100 (MQ=255)
                                                                              tACGGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACGCCACTTAAGc                      <  2:3290738/100‑1 (MQ=255)
                                                                              tACGGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACGCCACTTAAGc                      >  2:615211/1‑100 (MQ=255)
                                                                              tACGGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACGCCACTTAAGc                      >  1:1606013/1‑100 (MQ=255)
                                                                                cgtttgtACCCCTGAGTAGGCCTGTTAAGAAGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACGCCACTTAAGCCa                    <  2:3650017/94‑1 (MQ=38)
                                                                                cGGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACGCCACTTAAGCCa                    >  1:1981250/1‑100 (MQ=255)
                                                                                 ggTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACGCCACTTAAGCCAg                   >  1:800678/1‑100 (MQ=255)
                                                                                     cTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACGCCACTTAAGCCAGAAAg               <  1:2283616/100‑1 (MQ=255)
                                                                                        ccccTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACGCCACTTAAGCCAGAACGTTg            >  1:379419/1‑100 (MQ=255)
                                                                                        ccccTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACGCCACTTAAGCCAGAAAGTTg            >  2:1674661/1‑100 (MQ=255)
                                                                                        ccccTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACGCCACTTAAGCCAGAAAGTTg            >  1:3790993/1‑100 (MQ=255)
                                                                                         cccTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCctacgcaggggtagaaccgtaggtcggataaggcgtttacgccgcatccgacacgcat           <  1:309390‑M2/100‑59 (MQ=255)
                                                                                         cccTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCACGGCCGTATTAATTCGGCGGATAGCCCATTACCACGCCACTTAAGCCAGAAAGTTGc           >  2:3022659/1‑100 (MQ=255)
                                                                                          ccTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACGCCACTTAAGCCAGAAAGTTGCt          >  1:52521/1‑100 (MQ=255)
                                                                                            tGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACGCCACTTAAGCCAGAAAGTTGCTTc        <  2:3348678/100‑1 (MQ=255)
                                                                                               gTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACGCCACTTAAGCCAGAAAGTTGCTTCAAc     <  2:420628/100‑1 (MQ=255)
                                                                                               gTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACGCCACTTAAGCCAGAAAGTTGCTTCAAc     <  2:2635366/100‑1 (MQ=255)
                                                                                               gTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACGCCACTTAAGCCAGAAAGTTGCTTCAAc     <  2:755567/100‑1 (MQ=255)
                                                                                                 aGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACGCCACTTAAGCCAGAAAGTTGCTTCAAc     >  1:1272892/1‑98 (MQ=255)
                                                                                                  |                                                                                                   
TTCAACGCCATCGACTTTTTATGCCTTTGCGGCATCGGGCAATGCGTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACGGTTCTACCCCTGCGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCAAGACCGTATTAATTCGGCGTATAGCCCATTACCACGCCACTTAAGCCAGAAAGTTGCTTCAACTCA  >  NC_000913/2430882‑2431079

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.