New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 2662311 =NA (NA)14 (0.100) 7/168 NT NA noncoding (3/266 nt) REP184 (repetitive extragenic palindromic) element; contains 6 REP sequences REP184 (repetitive extragenic palindromic) element; contains 6 REP sequences
?NC_000913 2662337 = NA (NA)noncoding (29/266 nt) REP184 (repetitive extragenic palindromic) element; contains 6 REP sequences REP184 (repetitive extragenic palindromic) element; contains 6 REP sequences

Only 100 of 256 total aligned reads displayed.

GACATTCCCGAGTAAATTGGTCAACTATTTACTTGACTGATTTAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTCGGATGCGG  >  NC_000913/2662212‑2662410
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gACATTCCCGAGTAAATTGGTCAACTATTTACTTGACTGATTTAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTc                                                                                                     >  1:3043934/1‑100 (MQ=255)
gACATTCCCGAGTAAATTGGTCAACTATTTACTTGACTGATTTAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTc                                                                                                     <  1:1609010/100‑1 (MQ=255)
 aCATTCCCGAGTAAATTGGTCAACTATTTACTTGACTGATTTAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCg                                                                                                    <  1:3511350/100‑1 (MQ=255)
  cATTCCCGAGTAAATTGGTCAACTATTTACTTGACTGATTTAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCgg                                                                                                   <  2:881149/100‑1 (MQ=255)
   taggtcggataaggcgttcacgccgcatccgacagccgttgcctgatgcgacgcgtaatgcgtcttatcaggcctacagtgtacagaaccccagggCGGa                                                                                                  >  2:2383742‑M1/97‑100 (MQ=255)
   aTTCCCGAGTAAATTGGTCAACTATTTACTTGACTGATTTAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTTTCGTGTTGTTTGTACCTGTTGTCGGa                                                                                                  >  2:829378/1‑100 (MQ=255)
   aTTCCCGAGTAAATTGGTCAACTATTTACTTGACTGATTTAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGa                                                                                                  <  1:2489275/100‑1 (MQ=255)
    agatcggataaggcgttcacgccgcaaccgacagccgttgcctgatgcgacgcgtaatgcgtcttatcaggcctacagtgtacagaaccccagggCGGa                                                                                                  >  2:2876852‑M1/96‑99 (MQ=255)
     tCCCGAGTAAATTGGTCAACTATTTACTTGACTGATTTAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATg                                                                                                <  1:724098/100‑1 (MQ=255)
     tCCCGAGTAAATTGGTCAACTATTTACTTGACTGATTTAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATg                                                                                                <  2:3836375/100‑1 (MQ=255)
     gggcggataaggcgtacacgccgcatccgacagccgttgcctgatgcgacgcgtaatgcgtcttatcaggcctacagtgtacagaaccccagggCGGa                                                                                                  >  2:3553291‑M1/95‑98 (MQ=255)
      cccGAGTAAATTGGTCAACTATTTACTTGACTGCTTTAGTCGGCCATTTGACCTTCATTGCCATTTTTTTATCGCGGCGTTTGTACCTGTTGTCgg                                                                                                   >  2:4059174/1‑96 (MQ=255)
      cccGAGTAAATTGGTCAACTATTTACTTGACTGATTTAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGAtat                                                                                               >  1:2678762/1‑98 (MQ=255)
      cccGAGTAAATTGGTCAACTATTTACTTGACTGATTTAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATgc                                                                                               >  1:2095726/1‑100 (MQ=255)
      cccGAGTAAATTGGTCAACTATTTACTTGACTGATTTAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATgc                                                                                               >  1:2768584/1‑100 (MQ=255)
       ccGAGTAAATTGGTCAACTATTTACTTGACTGATTTAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATgcg                                                                                              >  2:1269757/1‑100 (MQ=255)
        cggataaggcgttcacgccgcatccgacagccgttgcctgatgcgacgcgtaatgcgtcttatcaggcctacagtgtacagaaccccagggCGGAt                                                                                                 >  2:2804343‑M1/92‑96 (MQ=255)
         gAGTAAATTGGTCAACTATTTACTTGACTGATTTAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATgcggc                                                                                            <  1:2824570/100‑1 (MQ=255)
             aaaTTGGTCAACTATTTACTTGACTGATTTAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGa                                                                                        >  1:3043089/1‑100 (MQ=255)
              aaTTGGTCAACTATTTACTTGACTGATTTAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGaa                                                                                       >  1:3074501/1‑100 (MQ=255)
               aTTGGTCAACTATTTACTTGACTGATTTAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAAc                                                                                      <  1:3763758/100‑1 (MQ=255)
                ttGGTCAACTATTTACTTGACTGATTTAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACg                                                                                     <  2:1836474/100‑1 (MQ=255)
                ttGGTCAACTATTTACTTGACTGATTTAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACg                                                                                     <  1:3906901/100‑1 (MQ=255)
                 tGGTCAACTATTTACTTGACTGATTTAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGc                                                                                    <  2:2810699/100‑1 (MQ=255)
                  ggTCAACTATTTACTTGACTGATTTAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGTCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGc                                                                                    >  2:3521516/1‑99 (MQ=255)
                   gacAACTATTTACTTGACTGATTTAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGTGGCGTGAACGCCa                                                                                  >  1:909820/3‑100 (MQ=255)
                   gTCAACTATTTACTTGACTGATTTAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTCCCTGTTGTCGGATGCGGCGTGAACGcc                                                                                   >  2:2606469/1‑99 (MQ=255)
                   gTCAACTATTTACTTGACTGATTTAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGcc                                                                                   >  2:4095570/1‑99 (MQ=255)
                   gTCAACTATTTACTTGACTGATTTAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCa                                                                                  >  1:2013035/1‑100 (MQ=255)
                   gTCAACTATTTACTTGACTGATTTAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCa                                                                                  >  2:3483923/1‑100 (MQ=255)
                   gTCAACTATTTACTTGACTGATTTAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCa                                                                                  >  2:1188916/1‑100 (MQ=255)
                     cAACTATTTACTTGACTGATTTAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCata                                                                                >  2:3169022/1‑100 (MQ=255)
                     cAACTATTTACTTGACTGATTTAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCata                                                                                >  1:1827617/1‑100 (MQ=255)
                        gccgcatccgacagccgttgcctgatgcgacgcgtaatgcgtcttatcaggcctacagtgaacagaaccgtaggtCGGATGCGGCGTGAACGCCTTATcc                                                                             >  1:1880470‑M1/76‑100 (MQ=255)
                        cTATTTACTTGACTGATTTAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTAGCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATcc                                                                             <  2:2445632/100‑1 (MQ=255)
                         tATTTACTTGACTGATTTAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCg                                                                            <  1:449087/100‑1 (MQ=255)
                          aTTTACTTGACTGATTTAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGc                                                                           <  1:2586237/100‑1 (MQ=255)
                           tttACTTGACTGATTTAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGcc                                                                          <  1:1559882/100‑1 (MQ=255)
                           gcatccgacagccgttgcctgatgcgacgcgtaatgcgtcttatcaggcctacagtgtacagaaccccagggCGGATGCGGCGTGAACGCCATATCCGcc                                                                          >  1:3681195‑M1/73‑100 (MQ=255)
                           gcatccgacagccgttgcctgatgcgacgcgtaatgcgtcttatcaggcctacagtgtacagaaccccagggCGGATGCGGCGTGAACGCCATATCCGcc                                                                          >  1:1910965‑M1/73‑100 (MQ=255)
                            ttACTTGACTGATTTAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGTGGCGTGAACGCCATATCCGccc                                                                         <  1:1321193/100‑1 (MQ=255)
                            ttACTTGACTGATTTAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGccc                                                                         >  2:1128446/1‑100 (MQ=255)
                              aCTTGACTGATTTAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTCTTGTGGCGTTTGTACTTGTTGTCGGATGCGGCGTGAACCGCATATCCGc                                                                           >  2:2572658/1‑96 (MQ=255)
                                cgacagccgttgcctgatgcgacgcgtaatgcgtcttatcaggcctacagtgtacagaaccccagggCGGATGCGGCGTGAACGCCATATCCGCCCTggg                                                                     >  2:1928460‑M1/68‑100 (MQ=255)
                                 tGACTGATTTAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTgggg                                                                    >  1:1717131/1‑100 (MQ=255)
                                  gACTGATTTAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGt                                                                   <  1:899446/100‑1 (MQ=255)
                                  acagccgttgcctgatgcgacgcgtaatgcgtcttatcaggcctacagtgtacagaaccccagggCGGATGCGGCGTGAACGCCATATCCGCCCTggg                                                                     >  1:1429679‑M1/66‑98 (MQ=255)
                                    cTGATTTAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTc                                                                 <  2:3336981/100‑1 (MQ=255)
                                    cTGATTTAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTc                                                                 >  2:256913/1‑100 (MQ=255)
                                    cTGATTTAGTCGGGTATTTAACCTTCAGTGCCATTTCTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTc                                                                 <  2:2281820/100‑1 (MQ=255)
                                    cTGATTTAGTCGGGTATTTAACCTGCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTc                                                                 <  2:1769565/100‑1 (MQ=255)
                                     tGATTTAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTc                                                                 <  2:199429/99‑1 (MQ=255)
                                      gATTTAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTg                                                               <  2:2337809/100‑1 (MQ=255)
                                      gATTTAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTg                                                               >  1:562490/1‑100 (MQ=255)
                                      gATTTAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTg                                                               <  1:2735436/100‑1 (MQ=255)
                                        tttAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGCTTCTGTa                                                             <  1:2161742/100‑1 (MQ=255)
                                        ttgaGTCGGGAAATTAACCTTCAGTGCAATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATTCGGCGTGAAAGCCATATCCGCACTGGTGTTCTGt                                                              >  2:2367642/4‑99 (MQ=255)
                                           aGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTacac                                                          <  1:1175122/100‑1 (MQ=255)
                                            gTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTTTCGGATGCGGCTTGAACGCCATATCCTCCCTTTGTTTCTGTtcac                                                          >  2:3267013/1‑99 (MQ=255)
                                             tCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGGGGCGTTTGTACCTGTTGGCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTg                                                        <  2:3406238/100‑1 (MQ=255)
                                               gggTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTa                                                      <  1:2952261/100‑1 (MQ=255)
                                               gggTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTa                                                      >  2:1362273/1‑100 (MQ=255)
                                                ggTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAg                                                     <  1:3855648/100‑1 (MQ=255)
                                                 gTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAgg                                                    <  1:1054257/100‑1 (MQ=255)
                                                     ttAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTg                                                <  2:2377852/100‑1 (MQ=255)
                                                      tAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTCCCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGc                                                   >  2:2031470/1‑96 (MQ=255)
                                                      tAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTg                                                <  2:3435691/99‑1 (MQ=255)
                                                      tAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGa                                               >  2:48905/1‑100 (MQ=255)
                                                       aaCCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGAt                                              >  1:812126/1‑100 (MQ=255)
                                                        aCCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATa                                             >  1:389531/1‑100 (MQ=255)
                                                         ccTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGGCATATCCGCCCTGGGGTTCTGTACACTGTAGGCGTGATaa                                            >  1:3651118/1‑100 (MQ=255)
                                                          cTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATAAg                                           >  2:971893/1‑100 (MQ=255)
                                                            tCAGTGCCATTTTTTTTTTTTTTTTTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATAAGAc                                         >  2:1111155/1‑100 (MQ=18)
                                                            tCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATAAGAc                                         <  1:2244141/100‑1 (MQ=255)
                                                                 gCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATAAGACGCAtt                                    >  1:2371841/1‑100 (MQ=255)
                                                                 gCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATAAGACGCAtt                                    >  1:1457027/1‑100 (MQ=255)
                                                                 gCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATAAGACGCAtt                                    <  2:713562/100‑1 (MQ=255)
                                                                   naTTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATAAGACGCATTAc                                  >  2:3617624/2‑100 (MQ=255)
                                                                    aTTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATAAGACGCATTAcg                                 >  2:2115387/1‑100 (MQ=255)
                                                                     tttttttATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATAAGACGCATTAcgc                                >  1:4057625/1‑100 (MQ=255)
                                                                        ttttATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATAAGACGCATTACGCGTc                             <  1:2031040/100‑1 (MQ=255)
                                                                        ttttATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATAAGACGCATTACGCGTc                             <  1:3483945/100‑1 (MQ=255)
                                                                        ttttATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATAAGACGCATTACGCGTc                             >  2:1881325/1‑100 (MQ=255)
                                                                        ttttATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATAAGACGCATTACGCGTc                             <  2:1665688/100‑1 (MQ=255)
                                                                        ttttATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATAAGACGCATTACGCGTc                             <  1:4082389/100‑1 (MQ=255)
                                                                         tttATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATAAGACGCATTACGCGTCg                            >  2:1606994/1‑100 (MQ=255)
                                                                           tATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATAAGACGCATTACGCGTCGCa                          <  1:1363300/100‑1 (MQ=255)
                                                                              cGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCa                       >  2:928288/1‑100 (MQ=255)
                                                                               gTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGTCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAg                      <  2:2792713/100‑1 (MQ=255)
                                                                               gTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAg                      >  2:213438/1‑100 (MQ=255)
                                                                               gTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAg                      >  1:3842788/1‑100 (MQ=255)
                                                                               gTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAg                      >  1:1757987/1‑100 (MQ=255)
                                                                                   cGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCaa                  >  2:3872342/1‑100 (MQ=255)
                                                                                    gTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAAc                 <  1:3173090/100‑1 (MQ=255)
                                                                                              gttgtCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTCGGa       <  2:1755850/100‑1 (MQ=255)
                                                                                                tgtCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGCTAAGACGCATTACGCGTCGCATCAGGCATCGGCTGTCGGacg     <  1:2800961/100‑3 (MQ=255)
                                                                                                tgtCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTCGGATg     >  1:802616/1‑100 (MQ=255)
                                                                                                 gtCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATAATACGCATTACGCGTCGCATCAGGCAACGGCTGTCGGATgc    >  2:2907580/1‑100 (MQ=255)
                                                                                                 gtCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATAAGATGCATTACGCGTCGCATCAGGCAACGGCTGTCGGATg     >  2:2778093/1‑99 (MQ=255)
                                                                                                 gtCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTCgggttc    >  2:24846/1‑96 (MQ=255)
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GACATTCCCGAGTAAATTGGTCAACTATTTACTTGACTGATTTAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTCGGATGCGG  >  NC_000913/2662212‑2662410

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.