New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 3470738 =NA (NA)21 (0.150) 9/168 NT NA coding (592/1185 nt) tufA translation elongation factor EF‑Tu 1
?NC_000913 3470767 = NA (NA)coding (563/1185 nt) tufA translation elongation factor EF‑Tu 1

Only 100 of 199 total aligned reads displayed.

GACCGGTAACAACGGTACCACGACCGGAGATGGAGAATACGTCTTCGATCGGCAGCAGGAACGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCTTCCAGCGCTTTCAGAGCAGAACCACGAACGATCGGAGTGTC  >  NC_000913/3470639‑3470831
                                                                                                   |                                                                                             
gACCGGTAACAACGGTACCACGACCGGAGATGGAGAATACGTCTTCGATCGGCAGCAGGAACGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGa                                                                                               >  2:4024150/1‑100 (MQ=32)
 aCCGGTACCAAAGGTACCAAGACCGGAGATGGAGAATACAACTTCGCTCGGCAACAGGACCCGCTAGCCAATCGCACGCTCTGGATCCGGAATATAAGaa                                                                                              >  2:2162259/1‑100 (MQ=11)
    ggTAACAACGGTACCACGACCGGAGATGGAGAATACGTCTTCGATCGGCAGCAGGAACGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATcc                                                                                           <  2:184317/100‑1 (MQ=33)
     gTAACAACGGTACCACGACCGGAGATGGAGAATACGTCTTCGATCGGCAGCAGGAACGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCa                                                                                          <  1:3377369/100‑1 (MQ=33)
       aacaacGGTACCACGACCGGAGATGGAGAATACGTCTTCGATCGGCAGCAGGAACGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAgg                                                                                        <  2:4094789/100‑1 (MQ=33)
       aacaacGGTACCACGACCGGAGATGGAGAATACGTCTTCGATCGGCAGCAGGAACGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAgg                                                                                        <  2:370765/100‑1 (MQ=33)
             ggTACCACGACCGGAGATGGAGAATACGTCTTCGATCGGCAGCAGGAACGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAagcca                                                                                  >  2:1622710/1‑100 (MQ=33)
               tACCACGACCGGAGATGGAGAATACGTCTTCGATCGGCAGCAGGAACGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAagccagc                                                                                >  1:614373/1‑100 (MQ=33)
               tACCACGACCGGAGATGGAGAATACGTCTTCGATCGGCAGCAGGAACGGCTTGTCAACCGCACGCTCTGGTTCCGGAATATAAGAAGCCAGGAagccacc                                                                                <  1:2796691/100‑3 (MQ=255)
                aCCACGACCGGAGATGGAGAATACGTCTTCGATCGGCAGCAGGAACGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAagccagcc                                                                               <  1:1611406/100‑1 (MQ=33)
                 ccACGACCGGAGATGGAGAATACGTCTTCGATCGGCAGCAGGAACGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAgccagcca                                                                              >  1:2080954/1‑100 (MQ=32)
                  cACGACCGGAGATGGAGAATACGTCTTCGATCGGCAGCAGGAACGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGccagccag                                                                             >  1:2603635/1‑100 (MQ=32)
                   aCGACCGGAGATGGAGAATACGTCTTCGATCGGCAGCAGGAACGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGt                                                                            >  2:2613145/1‑100 (MQ=32)
                   aCGACCGGAGATGGAGAATACGTCTTCGATCGGCAGCAGGAACGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGt                                                                            <  1:2093984/100‑1 (MQ=33)
                    cGACCGGAGATGGAGAATACGTCTTCGATCGGCAGCAGGAACGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGtt                                                                           >  1:3737429/1‑100 (MQ=33)
                      aCCGGAGATGGAGAATACGTCTTCGATCGGCAGCAGGAACGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTcc                                                                         <  1:3876757/100‑1 (MQ=33)
                      aCCGGAGATGGAGAATACGTCTTCGATCGGCAGCAGGAACGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTcc                                                                         >  1:1547567/1‑100 (MQ=33)
                       ccGGAGATGGAGAATACGTCTTCGATCGGCAGCAGGAACGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCa                                                                        >  1:2486971/1‑100 (MQ=33)
                        cGGAGATGGAGAATACGTCTTCGATCGGCAGCAGGAACGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAg                                                                       <  2:3067973/100‑1 (MQ=33)
                        cGGAGATGGAGAATACGTCTTCGATCGGCAGCAGGAACGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAg                                                                       <  1:1505759/100‑1 (MQ=33)
                         ggAGATGGAGAATACGTCTTCGATCGGCAGCAGGAACGGCTTGTCAATCGCACGCTCTGGTTCCGGCATATAAGAATCCAGGAAGCCAGCCAGTTCCAg                                                                       >  2:1289537/1‑99 (MQ=17)
                         ggAGATGGAGAATACGTCTTCGATCGGCAGCAGGAACGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAgg                                                                      >  1:2338978/1‑100 (MQ=32)
                          gagaTGGAGAATACGTCTTCGATCAGCAGCAGGAACGCCTTGACAATCTCACTCTCTACGTCCTGAATATAAGAAACCAGAAAGCCAGCCAATTCCAg                                                                       <  2:3928058/98‑1 (MQ=11)
                            gaTGGAGAATACGTCTTCGATCGGCAGCAGGAACGGCTTGTCAATCGCACGATCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGAtt                                                                   >  1:2959834/1‑100 (MQ=17)
                              tGGAGAATACGTCTTCGATCGGCAGCAGGAACGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGAtttt                                                                 >  1:403274/1‑100 (MQ=32)
                               ggAGAATACGTCTTCGATCGGCAGCAGGAACGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTc                                                                >  2:212310/1‑100 (MQ=32)
                               ggAGAATACGTCTTCGATCGGCAGCAGGAACGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTc                                                                >  2:244155/1‑100 (MQ=33)
                               ggAGAATACGTCATCGATCGGCAGCAGGAACGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTc                                                                >  1:2717769/1‑100 (MQ=18)
                                gagaATACGTCTTCGATCGGCAGCAGGAACGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTc                                                                <  2:2060030/99‑1 (MQ=33)
                                 agaATACGTCTTCGATCGGCAGCAGGAACGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGc                                                              <  1:3275451/100‑1 (MQ=33)
                                  gaATACGTCTTCGATCGGCAGCAGGAACGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCt                                                             >  2:457013/1‑100 (MQ=33)
                                    aTACGTCTTCGATCGGCAGCAGGAACGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTc                                                           <  1:4076169/100‑1 (MQ=33)
                                      aCGTCTTCGATCGGCAGCAGGAACGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTccc                                                         <  1:13610/100‑1 (MQ=33)
                                       cGTCTTCGATCGGCAGCAGGAACGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCa                                                        <  2:421680/100‑1 (MQ=32)
                                        gTCTTCGATCGGCAGCAGGAACGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCAc                                                       >  1:101587/1‑100 (MQ=33)
                                          cTTCGATCGGCAGCAGGAACGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCActc                                                     >  1:1627176/1‑100 (MQ=33)
                                           ttCGATCGGCAGCAGGAACGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCActct                                                    <  2:3738200/100‑1 (MQ=33)
                                            tCGATCGGCAGCAGGAACGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTg                                                   <  1:3187781/100‑1 (MQ=33)
                                            tCGATCGGCAGCAGGAACGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTg                                                   <  2:1767442/100‑1 (MQ=32)
                                             cGATCGGCAGCAGGACCGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTCTCGCTTCCCActc                                                     >  2:1513919/1‑97 (MQ=12)
                                             cGATCGGCAGCAGGAACGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCCCTCTGc                                                  >  2:3520680/1‑100 (MQ=17)
                                               aTCGGCAGCAGGAACGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGt                                                <  2:3117857/100‑1 (MQ=33)
                                                 cGGCAGCAGGAACGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCg                                              <  1:635926/100‑1 (MQ=33)
                                                    cagcagGAACGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCt                                           >  2:2846905/1‑100 (MQ=32)
                                                       cagGAACGGCGTGTCAATCGAGCGCTCTGGTTCCGGAATATTAGAATCCAGGCAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGcc                                            <  2:1400028/96‑1 (MQ=11)
                                                         ggAACGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCTTCCAg                                      >  2:217719/1‑100 (MQ=33)
                                                         ggAACGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCTTCCAg                                      >  1:4095650/1‑100 (MQ=33)
                                                         ggAACGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCTTCCAg                                      <  2:1207637/100‑1 (MQ=33)
                                                          gAACGGCTTGTCAATCGCACGCTCTGGTTCCGGAATAGAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCTTCCAgc                                     <  2:2778139/100‑1 (MQ=17)
                                                           aaCGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCTTCCAgcg                                    <  2:2358362/100‑1 (MQ=33)
                                                           aaCGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCTTCCAgcg                                    <  1:3913458/100‑1 (MQ=33)
                                                              ggCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCTTCCAGCGCtt                                 <  1:1313492/100‑1 (MQ=33)
                                                               gCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCTTCCAGCGCttt                                >  2:556758/1‑100 (MQ=33)
                                                                cTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCTTCCAGCGCTTTc                               <  1:98847/100‑1 (MQ=33)
                                                                cTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCTTCCAGCGCTTTc                               <  1:1260639/100‑1 (MQ=32)
                                                                 ttGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCTTCCAGCGCTTTCa                              <  1:765155/100‑1 (MQ=32)
                                                                  tGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCTTCCAGCGCTTTCag                             <  1:2927175/100‑1 (MQ=33)
                                                                  tGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCTTCCAGCGCTTTCag                             <  2:1895835/100‑1 (MQ=32)
                                                                   gTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCTTCCAGCGCTTTCaga                            <  1:3691149/100‑1 (MQ=33)
                                                                   gTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCTTCCAGCGCTTTCaga                            <  1:2643890/100‑1 (MQ=33)
                                                                    tCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCTTCCAGCGCTTTCagag                           >  2:816310/1‑100 (MQ=33)
                                                                    tCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCTTCCAGCGCTTTCagag                           >  1:3990396/1‑100 (MQ=33)
                                                                     cAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCTTCCAGCGCTTTCag                             >  2:3188841/1‑97 (MQ=33)
                                                                     cAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCTTCCAGCGCTTTCAGAGc                          <  1:2215464/100‑1 (MQ=32)
                                                                     cAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCTTCCAGCGCTTTCAGAGc                          <  1:3070456/100‑1 (MQ=33)
                                                                     cAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCTTCCAGCGCTTTCAGAGc                          >  2:520680/1‑100 (MQ=32)
                                                                      aaTCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCTTCCAGCGCTTTCAGAGCa                         >  1:1738679/1‑100 (MQ=33)
                                                                        tCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCTTCCAGCGCTTTCAGAGCAGa                       >  2:78739/1‑100 (MQ=33)
                                                                          gCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCTTCCAGCGCTTTCAGAGCAGAAc                     >  2:1754567/1‑100 (MQ=33)
                                                                            aCGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCTTCCAGCGCTTTCAGAGCAGAACCa                   <  2:3676580/100‑1 (MQ=33)
                                                                             cGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCTTCCAGCGCTTTCAGAGCAGAACCac                  <  2:658343/100‑1 (MQ=33)
                                                                             cGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCTTCCAGCGCTTTCAGAGCAGAACCac                  >  2:411348/1‑100 (MQ=33)
                                                                             cGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTT‑CCACTCTGCGTCGCCTTCCAGCGCTTTCAGAGCAGAACCacg                 <  2:1235605/100‑1 (MQ=18)
                                                                              gCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCTTCCAGCGCTTTCAGAGCAGAACCacg                 <  1:1347166/100‑1 (MQ=33)
                                                                               ctctGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCTTCCAGCGCTTTCAGAGCAGAACCacga                >  1:1072228/1‑100 (MQ=33)
                                                                               ctctGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCTTCCAGCGCTTTCAGAGCAGAACCacga                <  1:601856/100‑1 (MQ=33)
                                                                               ctctGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACACTGCGTCGCCTTCCAGCGCTTTCAGAGCAGAACCacg                 >  2:1124381/1‑99 (MQ=18)
                                                                                tctGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCTTCCAGCGCTTTCAGAGCAGAACCacgaa               <  2:2980030/100‑1 (MQ=33)
                                                                                tctGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCTTCCAGCGCTTTCAGAGCAGAACCacgaa               <  1:2249692/100‑1 (MQ=32)
                                                                                 ctGGTTCCGGAATATACGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTAGCCTTCCAGCGCTTTCAGAGCAGAACCacgaa               <  2:762526/99‑1 (MQ=12)
                                                                                 ctGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCTTCCAGCGCTTTCAGAGCAGAACCacgaac              <  2:364079/100‑1 (MQ=33)
                                                                                 ctGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCTTCCAGCGCTTTCAGAGCAGAACCacgaac              >  1:2112491/1‑100 (MQ=33)
                                                                                 ctGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCTTCCAGCGCTTTCAGAGCAGAACCacgaac              <  2:2810477/100‑1 (MQ=32)
                                                                                 ctGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGCATTTTCGCTTCCCACTCTGCGTCGCCTTCCAGCGCTTTCAGAGCAGAACCacgaac              <  2:2646031/100‑1 (MQ=17)
                                                                                   ggTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCTTCCAGCGCTTTCAGAGCAGAACCacgaacga            >  2:165038/1‑100 (MQ=33)
                                                                                   ggTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCTTCCAGCGCTTTCAGAGCAGAACCacgaacga            >  1:3200034/1‑100 (MQ=33)
                                                                                     ttCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCTTCCAGCGCTTTCAGAGCAGAACCACGAACGATc          <  1:244156/100‑1 (MQ=33)
                                                                                     ttCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCTTCAAGCGCTTTCAGAGCAGAACCACGAACGATc          >  1:343245/1‑100 (MQ=17)
                                                                                     ttCCAGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCTTCCAGCGCTTTCAGAGCAGAACCACGAACGATc          <  2:465982/100‑1 (MQ=17)
                                                                                       ccGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCTTCCAGCGCTTTCAGAGCAGAACCACGAACGATCgg        <  1:684972/100‑1 (MQ=33)
                                                                                        cGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCTTCCAGCGCTTTCAGAGCAGAACCACGAACGATCGGa       >  1:1176366/1‑100 (MQ=33)
                                                                                        cGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCTTCCAGCGCTTTCAGAGCAGAACCACGAACGATCGGa       <  1:204635/100‑1 (MQ=32)
                                                                                         ggAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCTTCCAGCGCTTTCAGAGCAGAACCACGAACGATCGGAg      <  1:3556535/100‑1 (MQ=33)
                                                                                         ggAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCTTCCAGCGCTTTCAGAGCAGAACCACGAACGATCGGAg      <  1:212311/100‑1 (MQ=33)
                                                                                         ggAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCTTCCAGCGCTTTCAGAGCAGAACCACGAACGATCGGAg      >  2:1929766/1‑100 (MQ=33)
                                                                                          gAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCTTCCAGCGCTTTCAGAGCAGAACCACGAACGATCGGAgt     >  2:346512/1‑100 (MQ=32)
                                                                                           aaTATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCTTCCAGCGCTTTCAGAGCAGAACCACGAACGATCGGAgtg    <  2:3328558/100‑1 (MQ=32)
                                                                                            atatAAGAATCCAGGAAGCCGGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCTTCCAGCGCTTTCAGAGCAGAACCACGAACGATCGGAgtc    >  2:2514827/1‑98 (MQ=17)
                                                                                            atatAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCTTCCAGCGCTTTCAGAGCAGAACCACGAACGATCGGAgtgt   >  1:3633923/1‑100 (MQ=32)
                                                                                             tataAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCTTCCAGCGCTTTCAGAGCAGAACCACGAACGATCGGAGTgtc  <  2:2275443/100‑1 (MQ=31)
                                                                                                   |                                                                                             
GACCGGTAACAACGGTACCACGACCGGAGATGGAGAATACGTCTTCGATCGGCAGCAGGAACGGCTTGTCAATCGCACGCTCTGGTTCCGGAATATAAGAATCCAGGAAGCCAGCCAGTTCCAGGATTTTCGCTTCCCACTCTGCGTCGCCTTCCAGCGCTTTCAGAGCAGAACCACGAACGATCGGAGTGTC  >  NC_000913/3470639‑3470831

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.