New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 2539674NA (NA)19 (0.140) 11/164 NT NA intergenic (‑91/+43) cysM/cysA cysteine synthase B (O‑acetylserine sulfhydrolase B)/sulfate/thiosulfate transporter subunit
?NC_000913 = 2539688 NA (NA)intergenic (‑105/+29) cysM/cysA cysteine synthase B (O‑acetylserine sulfhydrolase B)/sulfate/thiosulfate transporter subunit

Only 100 of 206 total aligned reads displayed.

TATCCATACGTGGTGTTGCCTGATGCGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCGAGAGCAAGTTCCTCATCGCGGGTTTCGATACGCTCGTCGCCGTTATACAGCCGCG  >  NC_000913/2539590‑2539787
                                                                                                  |                                                                                                   
tATCCATACGTGGTGTTGCCTGATGCGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCt                                                                                                    <  1:445688‑M2/100‑2 (MQ=255)
  tCCATACGTGGTGTTGCCTGATGCGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCtcc                                                                                                  >  2:1284300‑M2/1‑97 (MQ=255)
   ccATACGTGGTGTTGCCTGATGCGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCtccg                                                                                                 >  1:3894432‑M2/1‑96 (MQ=255)
   ccATACGTGGTGTTGCCTGATGCGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCtccg                                                                                                 <  1:653709‑M2/100‑5 (MQ=255)
    cATACGTGGTGTTGCCTGATGCGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCtccgg                                                                                                <  2:44800‑M2/100‑6 (MQ=255)
     aTACGTGGTGTTGCCTGATGCGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCtccggg                                                                                               >  1:2236367‑M2/1‑94 (MQ=255)
     aTACGTGGTGTTGCCTGATGCGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCtccggg                                                                                               <  1:1527993‑M2/100‑7 (MQ=255)
      tACGTGGTGTTGCCTGATGCGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCtccgggc                                                                                              <  1:1052603‑M2/100‑8 (MQ=255)
      tACGTGGTGTTGCCTGATGCGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCtccgggc                                                                                              >  2:2300541‑M2/1‑93 (MQ=255)
       aCGTGGTGTTGCCTGATGCGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCg                                                                                             <  1:854927/100‑1 (MQ=255)
        cGTGGTGTTGCCTGATGCGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGt                                                                                            >  1:3655616/1‑100 (MQ=255)
        cGTGGTGTTGCCTGATGCGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGt                                                                                            >  1:1356131/1‑100 (MQ=255)
         gtggtgTTGCCTGATGCGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGtt                                                                                           <  2:3141220/100‑1 (MQ=255)
         gtggtgTTGCCTGATGCGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATGAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGtt                                                                                           <  2:1785872/100‑1 (MQ=255)
           ggtggtGCTTGATGCGACGCGTGCGCGACTTATCAGGTCTACAGGTTATAAACCTTGCCATTACAAAGCCCGGATAGCGGGAAGCGCCCCCGGGCGTTTa                                                                                         <  2:2465169/100‑1 (MQ=255)
             tgtTGCCTGATGCGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAAc                                                                                       <  2:1000716/100‑1 (MQ=255)
             tgtTGCCTGATGCGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAAc                                                                                       <  1:2766239/100‑1 (MQ=255)
             tgtTGCCTGATGCGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAAc                                                                                       <  2:2390219/100‑1 (MQ=255)
              gtTGCCTGATGCGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACa                                                                                      <  1:424371/100‑1 (MQ=255)
              gtTGCCTGATGCGACGCTTGCGCGGCTTATCAGGTCTACAGGTGACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTGCGGGCGGTTAAc                                                                                       >  1:2250124/1‑99 (MQ=38)
               ttGCCTGATGCGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACAt                                                                                     <  1:893666/100‑1 (MQ=255)
                 gCCTGATGCGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTc                                                                                   >  1:2747016/1‑100 (MQ=255)
                 gCCTGATGCGACGCTTGCGCGTCTTATCAGGTCGACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGCAGCGCCTCCGGGCGTTTAACATTc                                                                                   >  2:3628601/1‑100 (MQ=255)
                 gCCTGATGCGACGCTTGCGCGTCTTATCAGGTCGACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCCCGGGAAGCGCCTCCGGGCGTTTAACATTc                                                                                   >  2:2483634/1‑100 (MQ=255)
                  ccTGATGCGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCa                                                                                  >  1:1804512/1‑100 (MQ=255)
                   cTGATGCGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCAc                                                                                 <  1:1714274/100‑1 (MQ=255)
                    tGATGCGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACt                                                                                >  2:3681886/1‑100 (MQ=255)
                    tGATGCGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACt                                                                                <  2:1496884/100‑1 (MQ=255)
                    tGATGCGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACt                                                                                >  1:3769507/1‑100 (MQ=255)
                     gATGCGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCAc                                                                                 <  2:1344953/98‑1 (MQ=255)
                        gCGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAAc                                                                            <  2:4082443/100‑1 (MQ=255)
                        gCGACGCTTGCGCGCCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGTATCCCGGGAAACGCCTCCGAGCGTATAACATTCACTCAAc                                                                            >  2:198451/1‑100 (MQ=255)
                         cGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAAcc                                                                           <  1:3118062/100‑1 (MQ=255)
                         cGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAAcc                                                                           >  2:4132385/1‑100 (MQ=255)
                           aCGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTa                                                                         <  2:490327/100‑1 (MQ=255)
                            cGCTTGCGCGTCTTATCAGGTCTACAGGTTACAACCCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTAt                                                                        <  2:2172546/100‑1 (MQ=255)
                            cGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCtccgggctttttaatggcaaggtttgtaa                                                                        <  1:2009133‑M2/100‑30 (MQ=255)
                                tGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAgg                                                                    <  1:2569294/100‑1 (MQ=255)
                                  cgcgTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGgcg                                                                  >  2:2989240/1‑100 (MQ=255)
                                         tATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTtgtg                                                           >  1:3374810/1‑100 (MQ=255)
                                          aTCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTtgtgn                                                          <  2:3089956/100‑2 (MQ=255)
                                            cAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCga                                                        >  1:2986356/1‑100 (MQ=255)
                                            cAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCga                                                        >  2:1019078/1‑100 (MQ=255)
                                             aGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCgag                                                       >  1:11395/1‑100 (MQ=255)
                                             aGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCgag                                                       <  2:2268546/100‑1 (MQ=255)
                                              ggTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCgaga                                                      <  1:2164639/100‑1 (MQ=255)
                                              ggTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCgaga                                                      <  1:2847565/100‑1 (MQ=255)
                                              ggTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCgaga                                                      <  1:3265024/100‑1 (MQ=255)
                                                tCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCGAGAGc                                                    <  2:445684/100‑1 (MQ=255)
                                                 cTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCGAGAGCa                                                   <  2:3748705/100‑1 (MQ=255)
                                                 cTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCGAGAGCa                                                   <  2:2535378/100‑1 (MQ=255)
                                                  tACAGGTTACAAACCTTGCCAGTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCGAGAGCaa                                                  <  2:2376809/100‑1 (MQ=255)
                                                    cAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCGAGAGCAAGt                                                <  1:496874/100‑1 (MQ=255)
                                                    cAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCGAGAGCAAGt                                                >  2:3276156/1‑100 (MQ=255)
                                                    cAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCGAGAGCAAGt                                                <  2:319514/100‑1 (MQ=255)
                                                    cAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCGAGAGCAAGt                                                <  2:1224995/100‑1 (MQ=255)
                                                      ggTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCGAGAGCAAGtt                                               >  1:982292/1‑99 (MQ=255)
                                                      ggTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCGAGAGCAAGTTc                                              >  1:2037952/1‑100 (MQ=255)
                                                       gTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCGAGAGCAAGTTcc                                             <  2:897032/100‑1 (MQ=255)
                                                       gTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCGAGAGCAAGTTcc                                             >  1:1183622/1‑100 (MQ=255)
                                                       gTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCGAGAGCAAGTTcc                                             <  1:199780/100‑1 (MQ=255)
                                                       gTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCGAGAGCAAGTTcc                                             >  1:2607198/1‑100 (MQ=255)
                                                         tACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCGAGAGCAAGTTCCTc                                           <  1:509668/100‑1 (MQ=255)
                                                           naaaCCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTCTAACATTCACTCAACCTATCAGGCGCTTTGTGCGAGAGCAAGTTCCTCAt                                         >  1:1869503/2‑100 (MQ=255)
                                                               ccTTGCCATTACAAAGCCCGGACCGCGGGAAGCGCCtccgggcgtttaatggcaaggcttgtaacctgtagacctgataagacgcgcaagcggcgcatc                                      <  2:273812‑M2/99‑64 (MQ=255)
                                                               ccTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCtccgggcgttttaatggcaaggtttgtaacctgtagacctgataagacgcgcaagcgtcgcatc                                     <  1:2448545‑M2/100‑65 (MQ=255)
                                                                 ttGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCGAGAGCAAGTTCCTCATCGCggg                                   <  1:1012435/100‑1 (MQ=255)
                                                                 ttGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCGAGAGCAAGTTCCTCATCGCggg                                   >  1:23143/1‑100 (MQ=255)
                                                                 ttGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCGAGAGCAAGTTCCTCATCGCggg                                   <  2:1336100/100‑1 (MQ=255)
                                                                   gCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCGAGAGCAAGTTCCTCATCGCGGGtt                                 <  1:3444929/100‑1 (MQ=255)
                                                                   gCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCGAGAGCAAGTTCCTCATCGCGGGtt                                 >  1:468717/1‑100 (MQ=255)
                                                                   gCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTATGTGCGAGAGCAAGTTCCTCATcgcg                                     >  2:3888689/1‑96 (MQ=255)
                                                                    ccATTAACAAGCCCGGATCGCGGGACGCGCCTCCGGGCGATTACCAGTCACACAACCTAGCAAGCGCTTTGTGCGAGAGCAAATTCCTCATACCGGGttt                                >  2:1163769/1‑100 (MQ=255)
                                                                    ccATTAAAAAGCCCGGATCGCGGGACGCGCCtccgggctttttaatggcaaggtttgtaacctgtagacctgataagacgcgcaagcgtcgcatcaggca                                <  1:1224919‑M2/100‑70 (MQ=255)
                                                                     cATTAAAAAGCCCGGATCGCGGGAAGCGCCtccgggctttttaatggcaaggtttgtaacctgtagacctgataagacgcgcaagcgtcgcatcaggcaa                               <  1:3815444‑M2/100‑71 (MQ=255)
                                                                     cATTAAAAAGCCCGGATCGCGGGAAGCGCCGCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCGAGAGCAAGTTCCTCATCGCGGGTTTc                               <  2:2140944/100‑1 (MQ=255)
                                                                      aTTAAAAAGCCCGGATCGCGGGAAGCGCCtccgggctttttaatggcaaggtttgtaacctgtagacctgataagacgcgcaagcgtcgcatcaggcaac                              <  1:352397‑M2/100‑72 (MQ=255)
                                                                      aTTAAAAAGACCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTCGTGCGAGAGCAAGTTCCTCATCGCGAGTTTc                               <  2:3984509/99‑1 (MQ=255)
                                                                       ttAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTTCGAGAGCAAGTTCCTCATCGCGGGTTTCGa                             <  2:1130145/100‑1 (MQ=255)
                                                                        tAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCGAGAGCAAGTTCCTCATCGCGGGTTTCGAt                            <  2:1711795/100‑1 (MQ=255)
                                                                        tAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCGAGAGCAAGTTCCTCATCGCGGGTTTCGAt                            <  2:2854110/100‑1 (MQ=255)
                                                                        tAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCGAGAGCAAGTTCCTCATCGCGGGTTTCGAt                            <  2:3520077/100‑1 (MQ=255)
                                                                         aaaaaGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCGAGAGCAAGTTCCTCATCGCGGGTTTCGAt                            >  2:3295970/1‑99 (MQ=255)
                                                                          aaaaGCCCGGATCGCGGGAAGCGCCtccgggctttttaatggcaaggtttgtaacctgtagacctgataagacgcgcaagcgtcgcatcaggcaacacca                          <  1:2667548‑M2/100‑76 (MQ=255)
                                                                          aaaaGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCGAGAGCAAGTTCCTCATCGCGGGTTTCGATAc                          >  1:3301448/1‑100 (MQ=255)
                                                                             aGCCCGGAGCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCGAGAGCAAGTTCCTCATCGCGGGTTTCGATACGCt                       <  2:2967023/100‑1 (MQ=255)
                                                                              gCCCGGATCGCGGGAAGCGCCtccgggctttttaatggcaaggtttgtaacctgtagacctgataagacgcgcaagcgtcgcatcaggcaacaccacgta                      <  1:1951822‑M2/100‑80 (MQ=255)
                                                                              gCCCGGATCGCGGGAAGCGCCtccgggctttttaatggcaaggtttgtaacctgtagacctgataagacgcgcaagcgtcgcatcaggcaacaccacgta                      <  1:3839151‑M2/100‑80 (MQ=255)
                                                                               cccGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCGAGAGCAAGTTCCTCATCGCGGGTTTCGATACGCtcg                     <  1:4030599/100‑1 (MQ=255)
                                                                                  ggATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCGAGAGCAAGTTCCTCATCGCGGGTTTCGATACGCtcgtcg                  <  1:877999/100‑1 (MQ=255)
                                                                                     tCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCGAGAGCAAGTTCCTCATCGCGGGTTTCGATACGCTCGTCGCCg               <  1:948332/100‑1 (MQ=255)
                                                                                     tCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCGAGAGCAAGTTCCTCATCGCGGGTTTCGATACGCTCGTCGCCg               <  2:3721018/100‑1 (MQ=255)
                                                                                       gcgGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCGAGAGCAAGTTCCTCATCGCGGGTTTCGATACGCTCGTCGCCGtt             >  2:2026017/1‑100 (MQ=255)
                                                                                         gggAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCGAGAGCAAGTTCCTCATCGCGGGTTTCGATACGCTCGTCGCCGTtat           <  1:3184009/100‑1 (MQ=255)
                                                                                         gggAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCGAGAGCAAGTTCCTCATCGCGGGTTTCGATACGCTCGTCGCCGTtat           <  2:3123309/100‑1 (MQ=255)
                                                                                          ggAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCGAGAGCAAGTTCCTCATCGCGGGTTTCGATACGCTCGTCGCCGTtata          <  2:1612285/100‑1 (MQ=255)
                                                                                            aaGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTGGGGCGAGAGCAAGTTCCTCATCGCGGGTTTCGATACGCTCGTCGCCGTTATACa        <  2:3456149/100‑1 (MQ=255)
                                                                                               cgcCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCGAGAGCAAGTTCCTCATCGCGGGTTTCGATACGCTCGTCGCCGTTATACAGcc     <  1:2490411/100‑1 (MQ=255)
                                                                                                  cTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCGAGAGCAAGTTCCTCATCGCGGGTTTCGATACGCTCGTCGCCGTTATACAGCcgcg  <  1:698737/100‑1 (MQ=255)
                                                                                                  cTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCGAGAGCAAGTTCCTCATCGCGGGTTTCGATACGCTCGTCGCCGTTATACAGCcgcg  <  2:1443514/100‑1 (MQ=255)
                                                                                                  |                                                                                                   
TATCCATACGTGGTGTTGCCTGATGCGACGCTTGCGCGTCTTATCAGGTCTACAGGTTACAAACCTTGCCATTAAAAAGCCCGGATCGCGGGAAGCGCCTCCGGGCGTTTAACATTCACTCAACCTATCAGGCGCTTTGTGCGAGAGCAAGTTCCTCATCGCGGGTTTCGATACGCTCGTCGCCGTTATACAGCCGCG  >  NC_000913/2539590‑2539787

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.