New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 2794028 =NA (NA)15 (0.110) 7/166 NT NA noncoding (1/136 nt) REP191 (repetitive extragenic palindromic) element; contains 3 REP sequences REP191 (repetitive extragenic palindromic) element; contains 3 REP sequences
?NC_000913 2794059 = NA (NA)noncoding (32/136 nt) REP191 (repetitive extragenic palindromic) element; contains 3 REP sequences REP191 (repetitive extragenic palindromic) element; contains 3 REP sequences

Only 100 of 218 total aligned reads displayed.

AGATCCGTCAGGGTCTGGAGATCATCAGCCAGTGTTTTGATGAGGCGAAGCAGTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCT  >  NC_000913/2793960‑2794158
                                                                                                   |                                                                                                   
tttcttccttttcacgtacagattttcggatgcggcgtaaacgccttatcggacctggatccccgtagGCCGGAGGCGACGCTGCGCGTCTTGTACGGcc                                                                                                     >  2:1278160‑M1/69‑100 (MQ=255)
tttcttcctgttcacgtacagattgtcggatgcggcgtaaacgccttatccgacctggatccccgtagGCCGGAGGCGACGCTGCGCGTCTTGTCCGGcc                                                                                                     >  2:2852333‑M1/69‑100 (MQ=255)
tttcttcctgttcacgtacagattgtcggatgcggcgtaaacgccttatccgacctggatccccgtagGCCGGAGGCGACGCTGCGCGTCTTGTCCGGcc                                                                                                     >  1:1221391‑M1/69‑100 (MQ=255)
tttcttcctgttcacgtacagattgtcggatgcggcgtaaacgccttatccgacctggatccccgtagGCCGGAGGCGACGCTGCGCGTCTTGTCCGGcc                                                                                                     >  1:1222206‑M1/69‑100 (MQ=255)
aGATCCGTCAGGGTCTGGAGATCATCAGCCAGTGTTTTGATGAGGCGAAGCAGTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGcc                                                                                                     <  1:2309146/100‑1 (MQ=255)
 gATCCGTCAGGGTCTGGAGATCATCAGCCAGTGTTTTGATGAGGCGAAGCAGTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCt                                                                                                    >  1:3826221/1‑100 (MQ=255)
 gATCCGTCAGGGTCTGGAGATCATCAGCCAGTGTTTTGATGAGGCGAAGCAGTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCt                                                                                                    >  1:1846242/1‑100 (MQ=255)
 gATCCGTCAGGGTCTGGAGATCATCAGCCAGTGTTTTGATGAGGCGAAGCAGTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCt                                                                                                    >  1:1766019/1‑100 (MQ=255)
    ccGTCAGGGTCTGGAGATCATCAGCCAGTGTTTTGATGAGGCGAAGCAGTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACg                                                                                                 >  1:2699619/1‑100 (MQ=255)
     tcctgttcacgtacagattgtcggatgcggcgtaaacgccttatccgacctggatccccgtagGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACgg                                                                                                >  2:1257161‑M1/64‑100 (MQ=255)
     cgacAGGGTCTGGAGATCATCAGCCAGTGTTTTGATGAGGCGAAGCAGTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACgg                                                                                                <  2:1121774/97‑1 (MQ=255)
          ttcacgtacagattgtcggatgcggcgtaaacgccttatccgacctggatccccgtagGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGa                                                                                             >  2:195432‑M1/59‑98 (MQ=255)
          gggTCTGGAGATCATCAGCCAGTGTTTTGATGAGGCGAAGCAGTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATc                                                                                           <  2:2990293/100‑1 (MQ=255)
           ggTCTGGAGATCATCAGCCAGTGTTTTGATGAGGCGAAGCAGTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATcc                                                                                          <  2:1956876/100‑1 (MQ=255)
            gTCTGGAGATCATCAGCCAGTGTTTTGATGAGGCGAAGCAGTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCa                                                                                         <  1:944429/100‑1 (MQ=255)
              cTGGAGATCATCAGCCAGTGTTTTGATGAGGCGAAGCAGTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAgg                                                                                       <  2:1718385/100‑1 (MQ=255)
                ggAGATCATCAGCCAGTGTTTTGATGAGGCGAAGCAGTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTc                                                                                     <  1:3215059/100‑1 (MQ=255)
                  agaTCATCAGCCAGTGTTTTGATGAGGCGAAGCAGTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCgg                                                                                   >  2:1879204/1‑100 (MQ=255)
                  agaTCATCAGCCAGTGTTTTGATGAGGCGAAGCAGTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCgg                                                                                   <  1:2577970/100‑1 (MQ=255)
                  agaTCATCAGCCAGTGTTTTGATGAGGCGAAGCAGTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCgg                                                                                   <  1:2069439/100‑1 (MQ=255)
                      catcaGCGAGTGGTTTGATGAGGCGAAGCAGTAGCGCCGCTCCTAGGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATa                                                                                <  2:392044/99‑1 (MQ=255)
                      catcaGCCAGTGTTTTGATGAGGCGAAGCAGTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATaa                                                                               >  2:715893/1‑100 (MQ=255)
                         caGCCAGTGTTTTGATGAGGCGAAGCAGTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGc                                                                            >  1:603572/1‑100 (MQ=255)
                          aGCCAGTGTTTTGATGAGGCGAAGCAGTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCg                                                                           <  1:1780833/100‑1 (MQ=255)
                           gCCAGTGTTTTGATGAGGCGAAGCAGTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGt                                                                          >  2:1451739/1‑100 (MQ=255)
                           gCCAGTGTTTTGATGAGGCGAAGCAGTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGt                                                                          <  2:3181871/100‑1 (MQ=255)
                            ccAGTGTTTTGATGAGGCGAAGCAGTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGtt                                                                         <  2:1042975/100‑1 (MQ=255)
                             cAGTGTTTTGATGAGGCGAAGCAGTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGttt                                                                        >  1:969675/1‑100 (MQ=255)
                             cAGTGTTTTGATGAGGCGAAGCAGTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGttt                                                                        <  2:383445/100‑1 (MQ=255)
                             cAGTGTTTTGATGAGGCGAAGCAGTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGtt                                                                         >  2:3499684/1‑99 (MQ=255)
                                 gtTTTGATGAGGCGAAGCAGTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTAcgc                                                                    >  2:1761389/1‑100 (MQ=255)
                                 gtTTTGATGAGGCGAAGCAGTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTAcgc                                                                    >  1:253979/1‑100 (MQ=255)
                                 gtTTTGATGAGGCGAAGCAGTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTAcgc                                                                    <  2:3651027/100‑1 (MQ=255)
                                  ttttGATGAGGCGAAGCAGTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTAcgcc                                                                   <  1:2565675/100‑1 (MQ=255)
                                   tttGATGAGGCGAAGCAGTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCTAGGTCGGATAAGGCGTTTAcgccg                                                                  <  1:4081665/100‑1 (MQ=255)
                                    ttGATGAGGCGAAGCAGTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGTCTACGGGGATCCAGGTCGGATAAGGCGTTTAcgccg                                                                  <  1:2918427/99‑1 (MQ=255)
                                    ttGATGAGGCGAAGCAGTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTAcgccgc                                                                 <  1:866040/100‑1 (MQ=255)
                                       atgaGGCGAAGCAGTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATc                                                              <  2:2400172/100‑1 (MQ=255)
                                       atgaGGCGAAGCAGTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATc                                                              >  1:1301868/1‑100 (MQ=255)
                                          aGGCGAAGCAGTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGa                                                           <  1:2981495/100‑1 (MQ=255)
                                           ggCGAAGCAGTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGAc                                                          >  1:3389792/1‑100 (MQ=255)
                                           ggCGAAGCAGTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGAc                                                          <  1:119606/100‑1 (MQ=255)
                                           ggCGAAGCAGTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGAc                                                          <  1:1337713/100‑1 (MQ=255)
                                           ggCGAAGCAGTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCACGTCGGATAAGGCGTTTACGCCGCATCCGAc                                                          <  2:2312658/100‑1 (MQ=255)
                                            gCGAAGCAGTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACa                                                         >  2:91177/1‑100 (MQ=255)
                                             cGAAGCAGTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACaa                                                        <  1:2504726/100‑1 (MQ=255)
                                             cGAAGCAGTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACaa                                                        <  1:3659464/100‑1 (MQ=255)
                                             cGAAGCAGTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACaa                                                        <  1:1865260/100‑1 (MQ=255)
                                              gtagcagcagcGCCGCTGCTATGCCGGAGGCGCCGCTGCGCATCTTGTGCGGCATACGGGCATCCAGGTGGGATACGGCGCTTGCGCCGCGTCCGACa                                                         >  2:642648/3‑98 (MQ=255)
                                                aGCAGTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCt                                                     <  1:2241011/100‑1 (MQ=255)
                                                 gCAGTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTg                                                    <  1:2421248/100‑1 (MQ=255)
                                                   aGTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTa                                                  >  1:1019680/1‑100 (MQ=255)
                                                     tAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACg                                                <  1:1683849/100‑1 (MQ=255)
                                                     tAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACg                                                <  1:3523190/100‑1 (MQ=255)
                                                       gcgcCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTg                                              >  2:3364235/1‑100 (MQ=255)
                                                        cgccgcTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGa                                             <  2:344436/100‑1 (MQ=255)
                                                        cgccgcTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGa                                             <  1:107197/100‑1 (MQ=255)
                                                           tccccgtaggccggacaagacgcgcagcgtcgcctccggcCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACa                                          >  1:3053009‑M2/41‑100 (MQ=255)
                                                           cgcTCCTGTGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACa                                          <  1:1788576/100‑1 (MQ=255)
                                                              tCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGga                                       <  1:1629142/100‑1 (MQ=255)
                                                              ccgtaggccggacaagacgcgcagcgtcgcctccggcCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGga                                       >  1:1720931‑M2/38‑100 (MQ=255)
                                                              ccgtagaccggacaagacgcgcagcgtcgcctccggcCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGga                                       >  1:3363475‑M2/38‑100 (MQ=255)
                                                               ccTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGgaa                                      >  1:3574878/1‑100 (MQ=255)
                                                                 tATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGgaaga                                    <  1:1902850/100‑1 (MQ=255)
                                                                 tATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGgaaga                                    <  2:2948704/100‑1 (MQ=255)
                                                                   ggccggacaagacgcgcagcgtcgcctccggcCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGaaa                                  >  1:3634017‑M2/33‑100 (MQ=255)
                                                                   ggccggacaagacgcgcagcgtcgcctccggcCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGaaa                                  >  2:2764510‑M2/33‑100 (MQ=255)
                                                                    GCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAAt                                 <  1:1739966‑M1/100‑1 (MQ=255)
                                                                     CCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATc                                >  1:912764‑M1/1‑100 (MQ=255)
                                                                      CGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTCCGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCt                               >  1:1567636‑M1/1‑100 (MQ=255)
                                                                       ggacaagacgcgcagcgtcgcctccggcCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTa                              >  1:3427234‑M2/29‑100 (MQ=255)
                                                                       GGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTa                              <  1:648757‑M1/100‑1 (MQ=255)
                                                                       GGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTa                              <  2:2657758‑M1/100‑1 (MQ=255)
                                                                          ggCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGt                           >  1:2646897/1‑100 (MQ=255)
                                                                            tgACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTg                         <  1:444745/99‑1 (MQ=255)
                                                                            cGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTg                         <  2:868432/100‑1 (MQ=255)
                                                                                gCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGgccg                     <  2:3618066‑M1/100‑5 (MQ=255)
                                                                                 cTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGgccgg                    >  1:2489840‑M1/1‑95 (MQ=255)
                                                                                   gcgcGTCTTGTGCGGCCTACGGGGGTCCATGTCGGATAAGGCGTTTACGCCGCATCAGACAATCTGTACGTTAACAGGAAGAAATCTATGTTGGCCg                     <  2:2028494/97‑1 (MQ=38)
                                                                                   gcgcGTCTTGTCCGGCCTACGGGGATCCAGATCAGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGt                  >  2:2715949/1‑100 (MQ=255)
                                                                                    cgcgTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTa                 <  1:469717/100‑1 (MQ=255)
                                                                                      cgTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAg               <  2:2923471/100‑1 (MQ=255)
                                                                                       gTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAgg              >  1:2119385/1‑100 (MQ=255)
                                                                                       gTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAgg              >  2:2239467/1‑100 (MQ=255)
                                                                                         cTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCg            >  1:3033995/1‑100 (MQ=255)
                                                                                           tGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGa          >  1:3208231/1‑100 (MQ=255)
                                                                                           tGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGa          >  2:3233684/1‑100 (MQ=255)
                                                                                            gTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAg         >  1:3262660/1‑100 (MQ=255)
                                                                                            gTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAg         >  2:1006479/1‑100 (MQ=255)
                                                                                             tccggcCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGagt        <  1:2408828‑M2/94‑2 (MQ=255)
                                                                                             tccggcCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGc        <  2:2136686‑M2/94‑1 (MQ=255)
                                                                                              ccggcCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGcc       >  1:4026732‑M2/6‑100 (MQ=255)
                                                                                              ccggcCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGc        <  2:2159010‑M2/94‑1 (MQ=255)
                                                                                              ccggcCTACGGGGATCCAGCTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATCTTGGCCGGGTACGGCGGAGcc       >  2:2611676‑M2/6‑100 (MQ=255)
                                                                                                ggcCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGc     >  1:1988866‑M2/4‑100 (MQ=255)
                                                                                                ggcCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGc     <  1:1136111‑M2/97‑1 (MQ=255)
                                                                                                 gcCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGct    >  2:562013‑M2/3‑100 (MQ=255)
                                                                                                 gcCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGct    >  1:2273124‑M2/3‑100 (MQ=255)
                                                                                                 gcCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGct    <  1:1459100‑M2/98‑1 (MQ=255)
                                                                                                  cCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGctc   >  2:1395305‑M2/2‑100 (MQ=255)
                                                                                                   |                                                                                                   
AGATCCGTCAGGGTCTGGAGATCATCAGCCAGTGTTTTGATGAGGCGAAGCAGTAGCGCCGCTCCTATGCCGGAGGCGACGCTGCGCGTCTTGTCCGGCCTACGGGGATCCAGGTCGGATAAGGCGTTTACGCCGCATCCGACAATCTGTACGTGAACAGGAAGAAATCTATGTTGGCCGGGTAAGGCGGAGCCGCTCT  >  NC_000913/2793960‑2794158

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.