BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	2835067 =	NA (NA)	14 (0.100)	6/164	NT	NA	noncoding (1/82 nt)	REP195 (repetitive extragenic palindromic) element; contains 2 REP sequences	REP195 (repetitive extragenic palindromic) element; contains 2 REP sequences
*	?	NC_000913	2835099 =	NA (NA)	14 (0.100)	6/164	NT	NA	noncoding (33/82 nt)	REP195 (repetitive extragenic palindromic) element; contains 2 REP sequences	REP195 (repetitive extragenic palindromic) element; contains 2 REP sequences

Only 100 of 189 total aligned reads displayed.

TCGGATGAAAGAGGCATTTGGATTGTTGAAAACATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCTGGACTTCACCCGCTA  >  NC_000913/2835000‑2835198

tgcatttggacaccattgccggatgcggcgtaaacgccttatccggcctacacatgcgtccccgtagGTCGGATGCGACGCTGGCGCGTCTTATCCGAcc                                                                                                     >  2:1526508‑M1/68‑100 (MQ=255)

tCGGATGAAAGAGGCATTTGGATTGTTGAAAACATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGAcc                                                                                                     <  2:1800633/100‑1 (MQ=255)

tCGGATGAAAGAGGCATTTGGATTGTTGAAAACATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGAcc                                                                                                     <  1:3965080/100‑1 (MQ=255)

tCGGATGAAAGAGGCATTTGGATTGTTGAAAACATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGAcc                                                                                                     <  2:2767605/100‑1 (MQ=255)

 cGGATGAAAGAGGCATTTGGATTGTTGAAAACATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCt                                                                                                    >  1:2815354/1‑100 (MQ=255)

   gATGAAAGAGGCATTTGGATTGTTGAAAACATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTAc                                                                                                  >  1:1222608/1‑100 (MQ=255)

     ttgggcaccattgccggatgcggcgtaaacgccttatccggcctacacatgcgtccccgtagGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACgg                                                                                                >  1:1551836‑M1/63‑100 (MQ=255)

      gAAAGAGGCATTTGGATTGTTGAAAACATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACggg                                                                                               <  1:2165111/100‑1 (MQ=255)

      gAAAGAGGCATTTGGATTGTTGAAAACATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACggg                                                                                               <  1:2929096/100‑1 (MQ=255)

      gAAAGAGGCATTTGGATTGTTGAAAACATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACggg                                                                                               <  2:2975685/100‑1 (MQ=255)

       aaaGAGGCATTTGGATTGTTGAAAACATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACgggg                                                                                              >  1:3270411/1‑100 (MQ=255)

       aaaGAGGCATTTGGATTGTTGAAAACATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACgggg                                                                                              >  2:3305371/1‑100 (MQ=255)

        aaGAGGCATTTGGATTGTTGAAAACATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTGATCCGACCTACgggg                                                                                              >  2:1677193/1‑99 (MQ=255)

         agagGCATTTGGATTGTTGAAAACATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGaa                                                                                            <  2:1546008/100‑2 (MQ=255)

              cATTTGGATTGTTGAAAACATTGCCGATGTAGGTGGGCTACTTTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCAtg                                                                                       <  2:2930894/100‑1 (MQ=255)

              cATTTGGATTGTTGAAAACATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCAtg                                                                                       <  1:3305336/100‑1 (MQ=255)

              cATTTGGATTGTTGAAAACATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCAtg                                                                                       >  1:524954/1‑100 (MQ=255)

                    gATTGTTGAAAACATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAgg                                                                                 >  1:1891656/1‑100 (MQ=255)

                     aTTGTTGAAAACATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGc                                                                                >  1:1666472/1‑100 (MQ=255)

                        gttgAAAACATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCgg                                                                             <  1:3477212/100‑1 (MQ=255)

                        gttgAAAACATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCgg                                                                             >  1:3204995/1‑100 (MQ=255)

                                cATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCg                                                                     <  1:3763621/100‑1 (MQ=255)

                                cATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCg                                                                     >  1:4112585/1‑100 (MQ=255)

                                cATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCg                                                                     >  2:198540/1‑100 (MQ=255)

                                cATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCg                                                                     <  1:45816/100‑1 (MQ=255)

                                    gCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACTCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTa                                                                 <  2:3151996/100‑1 (MQ=255)

                                     ccGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTAc                                                                >  1:2859647/1‑100 (MQ=255)

                                       gATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGAGACGCTGGCGCGTCTTATCCGACTTACGGGGACGCATGTGTAGGCCGGATAAGGCGTGTAc                                                                <  2:1329404/98‑1 (MQ=255)

                                        aTGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTAcgcc                                                             <  2:1891643/100‑1 (MQ=255)

                                        aTGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTAcgcc                                                             <  1:2110080/100‑1 (MQ=255)

                                         tGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTAcgccg                                                            <  1:872789/100‑1 (MQ=255)

                                         tGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTAcgccg                                                            <  2:2446103/100‑1 (MQ=255)

                                             ggTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATc                                                        >  2:2407254/1‑100 (MQ=255)

                                              gTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATGCGGCGTAAAcgccttatcc                                                       <  2:2926031/100‑7 (MQ=21)

                                              gTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATGCGGCGTAAACGCCTTATcc                                                       <  2:3504482/100‑1 (MQ=21)

                                              gTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATcc                                                       <  2:2819692/100‑1 (MQ=255)

                                               tGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCg                                                      <  1:2743980/100‑1 (MQ=255)

                                                 ggCTACTTTGCCTAAAATGTCGGATGCGACGCTGTCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATGCGGCGTAAACGCCTTATCCGGc                                                    <  2:461317/100‑1 (MQ=18)

                                                 ggCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCCTGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGc                                                    <  2:2204837/100‑1 (MQ=255)

                                                 ggCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGc                                                    <  2:1155675/100‑1 (MQ=255)

                                                 ggCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGc                                                    >  2:1844267/1‑100 (MQ=255)

                                                  ncTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCa                                                   >  1:1556142/2‑100 (MQ=255)

                                                  gCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCa                                                   >  1:4094643/1‑100 (MQ=255)

                                                    tACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAAt                                                 <  1:51187/100‑1 (MQ=255)

                                                     aCTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATg                                                >  2:203502/1‑100 (MQ=255)

                                                     aCTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATg                                                <  1:1045332/100‑1 (MQ=255)

                                                        gtgCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGgtg                                             >  1:2539729/1‑100 (MQ=255)

                                                         tgCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGgtgt                                            <  2:1222600/100‑1 (MQ=255)

                                                         tgCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGgtg                                             <  1:521850/99‑1 (MQ=255)

                                                          gCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTc                                           >  2:207726/1‑100 (MQ=255)

                                                          gCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTc                                           >  2:2204009/1‑100 (MQ=255)

                                                          gCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTc                                           >  2:564131/1‑100 (MQ=255)

                                                          gCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTc                                           >  1:2399327/1‑100 (MQ=255)

                                                          gCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTc                                           >  2:468256/1‑100 (MQ=255)

                                                           ccTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTcc                                          <  1:1940385/100‑1 (MQ=255)

                                                            cTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCa                                         >  1:4042539/1‑100 (MQ=255)

                                                            cTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCa                                         >  2:166807/1‑100 (MQ=255)

                                                            cTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCa                                         >  1:1888548/1‑100 (MQ=255)

                                                            cTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTGTACGCCGCATCCGGCAATGGGGTCCa                                         >  2:3750263/1‑100 (MQ=255)

                                                            cTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGAGTAGGCCGGATAAGGCGTTTACGCCGCATCCTGCAATGGTGTCCa                                         >  1:2054844/1‑100 (MQ=255)

                                                            cTAAAATGTCGGATGCGACGCTGGCGCGTCATAGCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCa                                         >  2:2722565/1‑100 (MQ=255)

                                                              aaaaTGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCaaa                                       >  1:2188552/1‑100 (MQ=255)

                                                               aaaTGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGTGTTTACGCCGCATCCGGCAATGGTGTCCAAAt                                      <  2:524949/100‑1 (MQ=255)

                                                                 atggCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGc                                    >  2:4081132‑M1/5‑100 (MQ=255)

                                                                 aTGTCGGATGCGACGCTGGGGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATg                                     <  2:586435/99‑1 (MQ=255)

                                                                   ggCGGAGGCGACGCTGGCGCGTCTGATCCGACCTACGGGGACGGATGTGTAGGCCGGTTAAGGCGGTTACGCCGCATCCGGCAATGGTGTCCAAATGCa                                   >  2:1492048‑M1/3‑99 (MQ=255)

                                                                   GTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCaa                                  <  1:2324805‑M1/100‑1 (MQ=255)

                                                                   GTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCaa                                  <  1:3429371‑M1/100‑1 (MQ=255)

                                                                   GTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCa                                   >  2:980450‑M1/1‑99 (MQ=255)

                                                                    TCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGTCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAac                                 >  1:3528651‑M1/1‑100 (MQ=255)

                                                                    TCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGGGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAac                                 >  2:2213697‑M1/1‑100 (MQ=255)

                                                                      ggataagacgcgccagcgtcgcatccgacCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAacac                               >  1:1255225‑M2/30‑100 (MQ=255)

                                                                      ggataagacgcgccagcgtcgcatccgacCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAacac                               >  1:3985402‑M2/30‑100 (MQ=255)

                                                                      GGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAacac                               <  1:1197417‑M1/100‑1 (MQ=255)

                                                                       gataagacgcgccagcgtcgcatccgacCTCCGGGGACGCAGGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTACAAATCCAACACg                              >  2:3854285‑M2/29‑100 (MQ=255)

                                                                       gataagacgcgccagcgtcgcatccgacCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACg                              >  1:630555‑M2/29‑100 (MQ=255)

                                                                        ATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGt                             >  1:3091796‑M1/1‑100 (MQ=255)

                                                                          gCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGttt                           <  2:1438719/100‑1 (MQ=255)

                                                                          gCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGttt                           <  1:3565224/100‑1 (MQ=255)

                                                                           cGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGtttt                          <  1:1863832/100‑1 (MQ=255)

                                                                           cGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGtttt                          >  1:39506/1‑100 (MQ=255)

                                                                             aCGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTAt                        >  1:362300/1‑100 (MQ=255)

                                                                               gCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATcc                      <  1:468260/100‑1 (MQ=255)

                                                                                cTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCg                     >  1:1034007/1‑100 (MQ=255)

                                                                                  ggCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGtt                   >  2:1742894/1‑100 (MQ=255)

                                                                                   gcgcGTCTTATCCGACCTACGGGGACGTATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTc                  <  1:910783/100‑1 (MQ=255)

                                                                                   gcgcGTCTTATCCGACCTACGGGGACGCATGTGTAGACCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTc                  <  2:2278251/100‑1 (MQ=255)

                                                                                      cgTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCTgg               <  1:3132150/100‑1 (MQ=255)

                                                                                       gTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCTGGa              >  1:2427654/1‑100 (MQ=255)

                                                                                        tCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCTGGAc             <  2:1130202/100‑1 (MQ=255)

                                                                                         cTTATCCGGCCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCTGGAcn            <  2:1556130/100‑2 (MQ=255)

                                                                                          ttATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCTGGACtt           >  1:369012/1‑100 (MQ=255)

                                                                                           tATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCTGGACTTc          >  1:3681723/1‑100 (MQ=255)

                                                                                              ccgacCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTCCGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCTGGACTTCAc        <  2:3985061‑M2/94‑1 (MQ=255)

                                                                                              ccgacCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCTGGACTTCAcc       >  2:3962016‑M2/6‑100 (MQ=255)

                                                                                              ccgacCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCTGGACTTCAcc       >  2:697263‑M2/6‑100 (MQ=255)

                                                                                               cgacCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCTGGACTTCAccc      >  2:3716505‑M2/5‑100 (MQ=255)

                                                                                                 acCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCTGGACTTCACCCGc    <  1:3050060‑M2/98‑1 (MQ=255)

                                                                                                  cCTACGGGGACGCATGTGTAGACCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATACAACACGATTTATCCGTTCTGGACTTCa         >  2:1038070‑M2/2‑94 (MQ=255)

                                                                                                   cTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCTGGACTTCACCCGCTa  <  1:3209614/100‑1 (MQ=255)

TCGGATGAAAGAGGCATTTGGATTGTTGAAAACATTGCCGATGTAGGTGGGCTACTGTGCCTAAAATGTCGGATGCGACGCTGGCGCGTCTTATCCGACCTACGGGGACGCATGTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATGGTGTCCAAATGCAACACGTTTTATCCGTTCTGGACTTCACCCGCTA  >  NC_000913/2835000‑2835198

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.