BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	3203112 =	NA (NA)	8 (0.060)	3/164	NT	NA	coding (1222/1239 nt)	cca	fused tRNA nucleotidyl transferase/2'3'‑cyclic phosphodiesterase/2'nucleotidase and phosphatase
*	?	NC_000913	3203140 =	NA (NA)	8 (0.060)	3/164	NT	NA	intergenic (+11/+170)	cca/bacA	fused tRNA nucleotidyl transferase/2'3'‑cyclic phosphodiesterase/2'nucleotidase and phosphatase/undecaprenyl pyrophosphate phosphatase

Only 100 of 241 total aligned reads displayed.

AAGGTGTGGAGATTCGCGAGGAGCTGACCCGACGGCGGATTGCGGCGGTAGCCAGCTGGAAGGAACAACGTTGCCCAAAGCCTGAATGAGTATTGGGCATTTTGCCGGATGCGGCGTAAACGCCTTATCCGGCTACATGTCAACGACAGTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCGTTGATTGCCGG  >  NC_000913/3203041‑3203239

  ggTGTGGAGATTCGCGAGGAGCTGACCCGACGGCGGATTGCGGCGGTAGCCAGCTGGAAGGAACAACGTTGCCCAAAGCCTGAATGAGTATTGGGCAttt                                                                                                   >  2:258544/1‑100 (MQ=255)

     gtgGAGATTCGCGAGGAGCTGACCCGACGGCGGATTGCGGCGGTAGCCAGCTGGAAGGAACAACGTTGCCCAAAGCCTGAATGAGTATTGGGCATTTTGc                                                                                                >  2:3303579/1‑100 (MQ=255)

     cttatcaggcctacaactgtcgttgacatgtagccggataaggcgtttacgccgcatccggcaaaaTGCCCAAAGCCTGAATGAGTATTGGGCATTTTGc                                                                                                >  1:689855‑M1/67‑100 (MQ=255)

      ttatcaggcctacaactgtcgttgacatgtagccggataaggcgtttacgccgcatccggcaaaaTGCCCAAAGCCTGAATGAGTATTGGGCATTTTGcc                                                                                               >  1:2485480‑M1/66‑100 (MQ=255)

       ggAGATTCGCTAGGAGCTGACCCGACGGCGGATTGCTGCGGTAGCCAGCTGGAAGGAACAACGTTGCCCAAAGCCTGAATGAGTATTGGGCATTTTGCCg                                                                                              <  1:4118112/100‑1 (MQ=255)

       ggAGATTCGCGAGGAGCTGACCCGACGGCGGATTGCGGCGGTAGCCAGCTGGAAGGAACCACGTTGCCCAAAGCATGAATGAGTATTGGGCATGTTGCCg                                                                                              >  2:800307/1‑100 (MQ=255)

       ggAGATTCGCGAGGAGCTGACCCGACGGCGGATTGCGGCGGTAGCCAGCTGGAAGGAACAACGTTGCCCAAAGCCTGAATGAGTATTGGGCATTTTGCCg                                                                                              <  1:314672/100‑1 (MQ=255)

       ggAGATTCGCGAGGAGCTGACCCGACGGCGGATTGCGGCGGTAGCCAGCTGGAAGGAACAACGTTGCCCAAAGCCTGAATGAGTATTGGGCATTTTGCCg                                                                                              <  1:3372896/100‑1 (MQ=255)

       ggAGATTCGCGAGGAGCTGACCCGACGGCGGAATGCGGCGGTAGCCAGCTGGAAGGAACAACGTTGCCCAAAGCCTGAATGAGTATTGGGCATTTTGCCg                                                                                              >  1:3926766/1‑100 (MQ=255)

              cgcgAGGAGCTGACCCGACGGCGGATTGCGGCGGTAGCCAGCTGGAAGGAACAACGTTGCCCAAAGCCTGAATGAGTATTGGGCATTTTGCCGGATgcgg                                                                                       >  1:1377432/1‑100 (MQ=255)

              cgcgAGGAGCTGACCCGACGGCGGATTGCGGCGGTAGCCAGCTGGAAGGAACAACGTTGCCCAAAGCCTGAATGAGTATTGGGCATTTTGCCGGATgcgg                                                                                       >  2:1640877/1‑100 (MQ=255)

                cgAGGAGCTGACCCGACGGCGGATTGCGGCGGTAGCCAGCTGGAAGGAACAACGTTGCCCAAAGCCTGAATGAGTATTGGGCATTTTGCCGGATgcggcg                                                                                     <  1:1007187/100‑1 (MQ=255)

                     agCTGACCCGACGGCGGATTGCGGCGGTAGCCAGCTGGAAGGAACAACGTTGCCCAAAGCCTGAATGAGTATTGGGCATTTTGCCGGATGCGGCGTAAAc                                                                                <  1:3120574/100‑1 (MQ=255)

                     agCTGACCCGACGGCGGATTGCGGCGGTAGCCAGCTGGAAGGAACAACGTTGCCCAAAGCCTGAATGAGTATTGGGCATTTTGCCGGATGCGGCGTAAAc                                                                                <  1:994004/100‑1 (MQ=255)

                      gCTGACCCGACGGCGGATTGCGGCGGTAGCCAGCTGGAAGGAACAACGTTGCCCAAAGCCTGAATGAGTATTGGGCATTTTGCCGGATGCGGCGTaaa                                                                                 >  2:4134079/1‑98 (MQ=255)

                      gCTGACCCGACGGCGGATTGCGGCGGTAGCCAGCTGGAAGGAACAACGTTGCCCAAAGCCTGAATGAGTATTGGGCATTTTGCCGGATGCGGCGTAAACg                                                                               >  2:1707777/1‑100 (MQ=255)

                      gCTGACCCGACGGCGGATTGCGGCGGTAGCCAGCTGGAAGGAACAACGTTGCCCAAAGCCTGAATGAGTATTGGGCATTTTGCCGGATGCGGCGTAAACg                                                                               <  2:3514397/100‑1 (MQ=255)

                      gCTGACCCGACGGCGGATTGCGGCGGTAGCCAGCTGGAAGGAACAACGTTGCCCAAAGCCTGAATGAGTATTGGGCATTTTGCCGGATGCGGCGTAAACg                                                                               >  1:3505344/1‑100 (MQ=255)

                        tGACCCGACGGCGGATTGCGGCGGTAGCCAGCTGGAAGGAACAACGTTGCCCAAAGCCTGAATGAGTATTGGGCATTTTGCCGGATGCGGCGTAAACGcc                                                                             >  1:753467/1‑100 (MQ=255)

                        tGACCCGACGGCGGATTGCGGCGGTAGCCAGCTGGAAGGAACAACGTTGCCCAAAGCCTGAATGAGTATTGGGCATTTTGCCGGATGCGGCGTAAACGcc                                                                             <  2:3219584/100‑1 (MQ=255)

                         gACCCGACGGCGGCTTGCGGCGGTAGCCAGCAGGAAGGAACAACGTTGCCCAAAGCCTGAATGAGTATTGGGCATTTTGCCGGATGCGGCGTAAACGCCt                                                                            >  1:2790095/1‑100 (MQ=255)

                           cccGACGGCGGATTGCGGCGGTAGCCAGCTGGAAGGAACAACGTTGCCCAAAGCCTGAATGAGTATTGGGCATTTTGCCGGATGCGGCGTAAACGCCTTa                                                                          >  2:3361719/1‑100 (MQ=255)

                           cccGACGGCGGATTGCGGCGGTAGCCAGCTGGAAGGAACAACGTTGCCCAAAGCCTGAATGAGTATTGGGCATTTTGCCGGATGCGGCGTAAACGCCTTa                                                                          >  1:1037855/1‑100 (MQ=255)

                            ccGACGGCGGATTGCGGCGGTAGCCAGCTGGAAGGAACAACGTTGCCCAAAGCCTGAATGAGTATTGGGCATTTTGCCGGATGCGGCGTAAACGCCTTAt                                                                         >  2:2014066/1‑100 (MQ=255)

                                cggcggATTGCGGCGGTAGCCAGCTGGAAGGAACAACGTTGCCCAAAGCCTGAATGAGTATTGGGCATTTTGCCGGATGCGGCGTAAACGCCTTATCCgg                                                                     <  1:2014079/100‑1 (MQ=255)

                                cggcggATTGCGGCGGTAGCCAGCTGGAAGGAACAACGTTGCCCAAAGCCTGAATGAGTATTGGGCATTTTGCCGGATGCGGCGTAAACGCCTTATCCgg                                                                     <  2:1130762/100‑1 (MQ=255)

                                cggcggATTGCGGCGGTAGCCAGCTGGAAGGAACAACGTTGCCCAAAGCCTGAATGAGTATTGGGCAATTTGCCGGATGCGGCGTAAACGCCTTATCCgg                                                                     >  2:2874756/1‑100 (MQ=255)

                                 ggcggATTGCGGCGGTAGCCAGCTGGAAGGAACAACGTTGCCCAAAGCCTGAATGAGTATTGGGCATTTTGCCGGATGCGGCGTAAACGCCTTATCCGGc                                                                    <  2:1660843/100‑1 (MQ=255)

                                 ggcggATTGCGGCGGTAGCCAGCTGGAAGGAACAACGTTGCCCAAAGCCTGAATGAGTATTGGGCATTTTGCCGGATGCGGCGTAAACGCCTTATCCGGc                                                                    <  1:1021421/100‑1 (MQ=255)

                                 ggcggATTGCGGCGGTAGCCAGCTGCAAGGAACAACGTTGCCCAAAGCCTGAATGAGTATTGGGCATTTTGCCGGATAAGGCGTTTACGCCGCATCCGGc                                                                    <  1:797854/100‑1 (MQ=25)

                                  gcggATTGCGGCGGTAGCCAGCTGGAAGGAACAACGTTGCCCAAAGCCTGAATGAGTATTGGGCATTTTGCCGGATGCGGCGTAAACGCCTTATCCGGCt                                                                   <  1:26024/100‑1 (MQ=255)

                                  gcggATTGCGGCGGTAGCCAGCTGGAAGGAACAACGTTGCCCAAAGCCTGAATGAGTATTGGGCATTTTGCCGGATGCGGCGTAAACGCCTTATCCGGCt                                                                   >  1:2441748/1‑100 (MQ=255)

                                  gcggATTGCGGCGGTAGCCAGCTGGAAGGAACAACGTTGCCCAAAGCCTGAATGAGTATTGGGCATTTTGCCGGATAAGGCGTTTACGCCGCATCCGGca                                                                   <  2:472498/100‑2 (MQ=37)

                                   cggATTNCGGCGGTAGCCAGCTGGAAGGAACAACGTTGCCCAAAGCCTGAATGAGTATTGGGCATTTTGCCGGATGCGGCGTAAACGNCTTATCCGGCTa                                                                  >  2:2166662/1‑100 (MQ=255)

                                   cggATTGCGGCGGTAGCCAGCTGGAAGGAACAACGTTGCCCAAAGCCTGAATGAGTATTGGGCATTTTGCCGGATGCGGCGTAAACGCCTTATCCGGCTa                                                                  >  2:2909090/1‑100 (MQ=255)

                                   cggATTGCGGCGGTAGCCAGCTGGAAGGAACAACGTTGCCCAAAGCCTGAATGAGTATTGGGCATTTTGCCGGATAAGGCGTTTACGCCGCATCCGGcaa                                                                  <  1:953936/100‑3 (MQ=25)

                                    ggATTGCGGCGGTAGTCAGGTGGAAGTAACAACGTTGCCCAAAGCCTGAATGAGTATTGGGCATTTTGCCGGGTGCGGCGTAAACGCCTTATCCGGc                                                                    <  2:731696/97‑1 (MQ=38)

                                    ggATTGCGGCGGTAGCCAGCTGGAAGGAACAACGTTGCCCAAAGCCTGAATGAGTATTGGGCATTTTGCCGGATGCGGCGTAAACGCCTTATCCGGCTAc                                                                 >  2:3566849/1‑100 (MQ=255)

                                     gATTGCGGCGGTAGCCAGCTGGAAGGAACAACGTTGCCCAAAGCCTGAATGAGTATTGTGCATTTTGCCGGATGCGGCGTAAACGCCTTATCCGGCTACa                                                                <  1:1468776/100‑1 (MQ=255)

                                      aTTGCGGCGGTAGCCAGCTGGAAGGAACAACGTTGCCCAAAGCCTGAATGAGTATTGGGCATTTTGCCGGATGCGGCGTAAACGCCTTATCCGGCTACAt                                                               <  1:3207790/100‑1 (MQ=255)

                                      aTTGCGGCGGTAGCCAGCTGGAAGGAACAACGTTGCCCAAAGCCTGAATGAGTATTGGGCATTTTGCCGGATGCGGCGTAAACGCCTTATCCGGCTACAt                                                               >  1:115000/1‑100 (MQ=255)

                                       ttGCGGCGGTAGCCAGCTGGAAGGAACAACGTTGCCCAAAGCCTGAATGAGTATTGGGCATTTTGCCGGATGCGGCGTAAACGCCTTATCCGGCTACATg                                                              <  1:3348246/100‑1 (MQ=255)

                                         gcggcgGTAGCCAGCTGGAAGGAACAACGTTGCCCAAAGCCTGAATGAGTATTGGGCATTTTGCCGGATGCGGCGTAAACGCCTTATCCGGCTACATGTc                                                            <  2:2723863/100‑1 (MQ=255)

                                         gcggcgGTAGCCAGCTGGAAGGAACAACGTTGCCCAAAGCCCGAATGAGTATTGGGCATTTTGCCGGATGCGGCGAAAACGCCTTATCCGGCTACATGTc                                                            >  2:2097951/1‑100 (MQ=255)

                                          cggcggTAGCCAGCTGGAAGGAACAACGTTGCCCAAAGCCTGAATGAGTATTGGGCATTTTGCCGGATGCGGCGTAAACGCCTTATCCGGCTACATGTCa                                                           >  2:3058410/1‑100 (MQ=255)

                                            tttacggCCAGCTGGAAGGAACAACGTTGCCCAAAGCCTGAATGAGTATTGGGCATTTTGCCGGATGCGGCGTAAACGCCTTATCCTGCTACATGTCacc                                                         <  1:2803622/94‑3 (MQ=38)

                                            gcggTAGCCAGCTGGAAGGAACAACGTTGCCCAAAGCCTGAATGAGTATTGGGCATTTTGCCGGATGCGGCGTAAACGCCTTATCCGGCTACATGTCAAc                                                         >  2:1552561/1‑100 (MQ=255)

                                               ggaGCCATCTGGAAGGAACAACGTTGCCCAAAGCCTGAATGAGTATTGGGCATTTTGCCGGATGCGGCGTAAACGCCTTATCCGGCTACATGTCAAc                                                         <  2:4070099/95‑1 (MQ=255)

                                                  gCCAGCTGGAAGGAACAACGTTGCCCAAAGCCTGAATGAGTATTGGGCATTTTGCCGGATGCGGCGTAAACGCCTTATCCGGCTACATGTCAACGACAGt                                                   >  1:2389217/1‑100 (MQ=255)

                                                  gCCAGCTGGAAGGAACAACGTTGCCCAAAGCCTGAATGAGTATTGGGCATTTTGCCGGATGCGGCGTAAACGCCTTATCCGGCTACATGTCAACGACAGt                                                   >  2:2144040/1‑100 (MQ=255)

                                                  gCCAGCTGGAAGGAACAACGTTGCCCAAAGCCTGAATGAGTATTGGGCATTTTGCCGGATGCGGCGTAAACGCCTTATCCGGCTACATGTCAACGACAGt                                                   >  2:1922439/1‑100 (MQ=255)

                                                   ccAGCTGGAAGGAACAACGTTGCCCAAAGCCTGGAGGAGTATTGGGCATTTTGCCGGCTGCGGCGTAAACGCCTTATCCGGCTACATGGCAGCgccgg                                                    >  2:2434591/1‑94 (MQ=37)

                                                   ccAGCTGGAAGGAACAACGTTGCCCAAAGCCTGAATGAGTATTGGGCATTTTGCCGGATGCGGCGTAAACGCCTTATCCGGCTACATGTCAACGACAGtt                                                  >  1:2104570/1‑100 (MQ=255)

                                                       cTGGAAGGAACAACGTCGCCCAAAACCTGAATGAGTATTGGGCATTTTGCCGGATGGGGCGTAAACGCCTTATCCGGCTACATGTCAACGACAGTTGTAg                                              <  2:1126288/100‑1 (MQ=255)

                                                        tGGAAGGAACAACGTTGCCCAAAGCCTGAATGAGTATTGGGCATTTTGCCGGATGCGGCGTAAACGCCTTATCCGGCTACATGTCAACGACAGTTGTAgg                                             >  2:3755865/1‑100 (MQ=255)

                                                        tGGAAGGAACAACGTTGCCCAAAGCCTGAATGAGTATTGGGCATTTTGCCGGATGCGGCGTAAACGCCTTATCCGGCTACATGTCAACGACAGTTGTAgg                                             <  1:327941/100‑1 (MQ=255)

                                                          gaaggaaCAACGTTGCCCAAAGCCTGAATGAGTATTGGGCATTTTGCCGGATGCGGCGTAAACGCCTTATCCGGCTACATGTCAACGACAGTTGTAGGcc                                           <  2:2086362/100‑1 (MQ=255)

                                                          gaaggaaCAACGTTGCCCAAAGCCTGAATGAGTATTGGGCATTTTGCCGGATGCGGCGTAAACGCCTTATCCGGCTACATGTCAACGACAGTTGTAGGcc                                           <  2:3417017/100‑1 (MQ=255)

                                                            aggaaCAACGTTGCCCAAAGCCTGAATGAGTATTGGGCATTTTGCCGGATGCGGCGTAAACGCCTTATCCGGCTACATGTCAACGACAGTTGTAGGCCTg                                         >  1:1966760/1‑100 (MQ=255)

                                                             ggaaCAACGTTGCCCAAAGCCTGAATGAGTATTGGGCATTTTGCCGGATGCGGCGTAAACGCCTTATCCGGCTACATGTCAACGACAGTTGTAGGCCTGa                                        <  1:2505816/100‑1 (MQ=255)

                                                             ggaaCAACGTTGCCCAAAGCCTGAATGAGTATTGGGCATTTTGCCGGATGCGGCGTAAACGCCTTATCCGGCTACATGTCAACGACAGTTGTAGGCCTGa                                        >  2:1756512/1‑100 (MQ=255)

                                                             ggaaCAACGTTGCCCAAAGCCTGAATGAGTATTGGGCATTTTGCCGGATGCGGCGTAAACGCCTTATCCGGCTACATGTCAACGACAGTTGTAGGCCTGa                                        >  2:821037/1‑100 (MQ=255)

                                                             ggaaCAACGTTGCCCAAAGCCTGAATGAGTATTGGGCATTTTGCCGGATGCGGCGTAAACGCCTTATCCGGCTACATGTCAACGACAGTTGTAGGCCTGa                                        >  2:1988956/1‑100 (MQ=255)

                                                             ggaaCAACGTTGCCCAAAGCCTGAATGAGTATTGGGCATTTTGCCGGATGCGGCGTAAACGCCTTATCCGGCTACATGTCAACGACAGTTGTAGGCCTGa                                        <  2:888270/100‑1 (MQ=255)

                                                              gaaCAACGTTGCCCAAAGCCTGAATGAGTATTGGGCATTTTGCCGGATGCGGCGTAAACGCCTTATCCGGCTACATGTCAACGACAGTTGTAGGCCTGAt                                       >  1:2263785/1‑100 (MQ=255)

                                                               aacaacGTTGCTCAAAGACTGAATGAGTATTGGGCACTTTGCCGGATGCGGCGTAAACGCCTTATCCGGCTACATGTCAACGACAGTTGTAGGCCTGATa                                      <  2:2042599/100‑1 (MQ=255)

                                                                ggcaaaatgcccaatactcattcaggctttgggcaTTTTGCCGGATGCGGCGTAAACGCCTTATCCGGCTACATGTCAACGACAGTTGTAGGCCTGATaa                                     >  1:479676‑M2/36‑100 (MQ=255)

                                                                ggcaaaatgcccaatactcattcaggctttgggcaTTTTGCCGGATGCGGCGTAAACGCCTTATCCGGCTACATGTCAACGACAGTTGTAGGCCTGATaa                                     >  1:479532‑M2/36‑100 (MQ=255)

                                                                 gcaaaatgcccaatactcattcaggctttgggcaTTTTGCCGGATGCGGCGTAAACGCCTTATCCGGCTACATGTCAACGACAGTTGTAGGCCTGATAAg                                    >  2:858172‑M2/35‑100 (MQ=255)

                                                                 gcaaaatgcccaatactcattcaggctttgggcaTTTTGCCGGATGCGGCGTAAACGCCTTATCCGGCTACATGTCAACGACAGTTGTAGGCCTGATAAg                                    >  2:1800292‑M2/35‑100 (MQ=255)

                                                                 caacGTTGCCCAAAGCCTGAATGAGTATTGGGCATTTTGCCGGATGCGGCGTAAACGCCTTATCCGGCTACATGTCAACGACAGTTGTAGGCCTGATAAg                                    >  1:3652930/1‑100 (MQ=255)

                                                                  caaaatgcccaatactcattcaggctttgggcaTTTTGCCGGATGCGGCGTAAACGCCTTATCCGGCTACATGTCAACGACAGTTGTAGGCCTGATAAGa                                   >  1:3397860‑M2/34‑100 (MQ=255)

                                                                  caaaatgcccaatactcattcaggctttgggcaTTTTGCCGGATGCGGCGTAAACGCCTTATCCGGCTACATGTCAACGACAGTTGTAGGCCTGATAAGa                                   >  1:957038‑M2/34‑100 (MQ=255)

                                                                  aacGTTGCCCAAAGCCTGAATGAGTATTGGGCATTTTGCCGGATGCGGCGTAAACGCCTTATCCGGCTACATGTCAACGACAGTTGTAGGCCTGATAAGa                                   <  2:1351069/100‑1 (MQ=255)

                                                                     gTTGCCCAAAGCCTGAATGAGTATTGGGCATTTTGCCGGATGCGGCGTAAACGCCTTATCCGGCTACATGTCAACGACAGTTGTAGGCCTGATAAGAcg                                 <  2:2235992/99‑1 (MQ=255)

                                                                      ttGCCCAAAGCCTGAATGAGTATTGGGCATTTTGCCGGATGCGGCGTAAACGCCTTATCCGGCTACATGTCAACGACAGTTGTAGGCCTGATAAGAcgcg                               <  2:300430/100‑1 (MQ=255)

                                                                       TGCCCAAAGCCTGAATGAGTATTGGGCATTTTGCCGGATGCGGCGTAAACGCCTTATCCGGCTACATGTCAACGACAGTTGTAGGCCTGATAAGACgcgc                              <  1:1354843‑M1/100‑1 (MQ=255)

                                                                        GCCCAAAGCCTGAATGAGTATTGGGCATTTTGCCGGATGCGGCGTAAACGCCTTATCCGGCTACATGTCAACGACAGTTGTAGGCCTGATAGGACGCGCa                             <  2:640960‑M1/100‑1 (MQ=255)

                                                                        GCCCAAAGCCTGAATGAGTATTGGGCATTTTGCCGGATGCGGCGTAAACGCCTTATCCGGCTACATGTCAACGACAGTTGTAGGCCTGATAAGACGCGCa                             <  1:3974728‑M1/100‑1 (MQ=255)

                                                                        GCCCAAAGCCTGAATGAGTATTGGGCATTTTGCCGGATGCGGCGTAAACGCCTTATCCGGCTACATGTCAACGACAGTTGTAGGCCTGATAAGACGCGCa                             <  1:2491388‑M1/100‑1 (MQ=255)

                                                                         CCCAAAGCCTGAATGAGTATTGGGCATTTTGCCGGATGCGGCGTAAACGCCTTATCCGGCTACATGTCAACGACAGTTGTAGGCCTGATAAGACGCGCaa                            <  1:1194510‑M1/100‑1 (MQ=255)

                                                                         CCCAAAGCCTGAATGAGTATTGGGCATTTTGCCGGATGCGGCGTAAACGCCTTATCCGGCTACATGTCAACGACAGTTGTAGGCCTGATAAGACGCGCaa                            <  1:3541436‑M1/100‑1 (MQ=255)

                                                                           CAAAGCCTGAATGAGTATTGGGCATTTTGCCGGATGCGGCGTAAACGCCTTATCCGGCTACATGTCAACGACAGTTGTAGGCCTGATAAGACGCGCAAGc                          >  1:3303599‑M1/1‑100 (MQ=255)

                                                                           CAAAGCCTGAATGAGTATTGGGCATTTTGCCGGATGCGGCGTAAACGCCTTATCCGGCTACATGTCAACGACAGTTGTAGGCCTGATAAGACGCGCAAGc                          >  1:3057087‑M1/1‑100 (MQ=255)

                                                                              aGCCTGAATGAGTATTGGGCATTTTGCCGGATGCGGCGTAAACGCCTTATCCGGCTACATGTCAACGACAGTTGTAGGCCTGATAAGACGCGCAAGCGTc                       <  1:2088568/100‑1 (MQ=255)

                                                                                ccTGAATGAGTATTGGGCATTTTGCCGGATGCGGCGTAAACGCCTTATCCGGCTACATGTCAACGACAGTTGTAGGCCTGATAAGACGCGCAAGCGTCGc                     <  1:1614573/100‑1 (MQ=255)

                                                                                    aaTGAGTATTGGGCATTTTGCCGGATGCGGCGTAAACGCCTTATCCGGCTACATGTCAACGACAGTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCa                 <  1:2131666/100‑1 (MQ=255)

                                                                                      tGAGTATTGGGCATTTTGCCGGATGCGGCGTAACCGCCTTATCCGGCTACATGTCAACGACAGTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAgg               <  1:1323653/100‑1 (MQ=255)

                                                                                      tGAGTATTGGGCATTTTGCCGGATGCGGCGTAAACGCCTTATCCGGCTACATGTCAACGACAGTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAgg               <  1:2299867/100‑1 (MQ=255)

                                                                                      tGAGTATTGGGCATTTTGCCGGATGCGGCGTAAACGCCTTATCCGGCTACATGTCAACGACAGTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAgg               <  2:3919422/100‑1 (MQ=255)

                                                                                       gAGTATTGGGCATTTTGCCGGATGCGGCGTAAACGCCTTATCCGGCTACATGTCAACGACAGTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGc              <  1:2909106/100‑1 (MQ=255)

                                                                                        aGTATTGGGCATTTTGCCGGATGCGGCGTAAACGCCTTATCCGGCTACATGTCAACGACAGTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCg             <  1:1713576/100‑1 (MQ=255)

                                                                                          tATTGGGCATTTTGCCGGATGCGGCGTAAACGCCTTATCCGGCTACATGTCAACGACAGTTGTAGGCCTGATAAGACTCGCAAGCGTCGCATCAGGCGtt           <  2:2397750/100‑1 (MQ=255)

                                                                                          tATTGGGCATTTTGCCGGATGCGGCGTAAACGCCTTATCCGGCTACATGTCAACGACAGTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCGtt           <  1:1869912/100‑1 (MQ=255)

                                                                                           aTTGGGCATTTTGCCGGATGCGGCGTAAACGCCTTATCCGGCTACATGTCAACGACAGTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCGTTg          >  2:1307694/1‑100 (MQ=255)

                                                                                               ggcaTTTTGCCGGATGCGGCGTAAACGCCTTATCCGGCTACATGTCAACGACAGTTGTAGGCCTGATAAGACGCGCAAGAGTCGCATCAGGAGTTGATTg      >  1:3446637‑M2/5‑100 (MQ=255)

                                                                                                gcaTTTTGCCGGATGCGGCGTAAACGCCTTATCCGGCTACATGTCAACGACAGTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCGTTGATTGc     >  1:1274711‑M2/4‑100 (MQ=255)

                                                                                                gcaTTTTGCCGGATGCGGCGTAAACGCCTTATCCGGCTACATGTCAACGACAGTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCGTTGATTGc     >  1:3024920‑M2/4‑100 (MQ=255)

                                                                                                  aTTTTGCCGGATGCGGCGTAAACGCCTTATCCGGCTACATGTCAACGACAGTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCGTTGATTGCCg   <  1:2582408‑M2/99‑1 (MQ=255)

                                                                                                   ttttGCCGGATGCGGCGTAAACGCCTTATCCGGCTACATGTCAACGACAGTTGTAGGCCCGATAAGACGCGCAAGCGTCCCATCAGGCGTTGATTGCCgg  <  2:2527083/100‑1 (MQ=255)

AAGGTGTGGAGATTCGCGAGGAGCTGACCCGACGGCGGATTGCGGCGGTAGCCAGCTGGAAGGAACAACGTTGCCCAAAGCCTGAATGAGTATTGGGCATTTTGCCGGATGCGGCGTAAACGCCTTATCCGGCTACATGTCAACGACAGTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCGTTGATTGCCGG  >  NC_000913/3203041‑3203239

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.