BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	3910443 =	NA (NA)	7 (0.050)	6/168	NT	NA	noncoding (1/35 nt)	REP284 (repetitive extragenic palindromic) element; contains 1 REP sequences	REP284 (repetitive extragenic palindromic) element; contains 1 REP sequences
*	?	NC_000913	3910474 =	NA (NA)	7 (0.050)	6/168	NT	NA	noncoding (32/35 nt)	REP284 (repetitive extragenic palindromic) element; contains 1 REP sequences	REP284 (repetitive extragenic palindromic) element; contains 1 REP sequences

Only 100 of 211 total aligned reads displayed.

AAAAGCAGGCTTGGTTGCAGCCATAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTCCACGCAGCGCGAACCTGTTCAACTACACTATCCGGCAGGCTGGCG  >  NC_000913/3910375‑3910572

aaaaGCAGGCTTGGTTGCAGCCATAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGcc                                                                                                    <  2:866666/100‑1 (MQ=255)

aaaaGCAGGCTTGGTTGCAGCCATAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGcc                                                                                                    <  2:676054/100‑1 (MQ=255)

 ttcgcgctgcgtggaagaccaatattaaagacagtagcggtaagccgctgtactaataaaactccagGCCGGATGCGGCGTAAAACACCGTACCCGGCCt                                                                                                   >  1:175349‑M1/68‑100 (MQ=255)

 aaaGCAGGCTTGGTTGCAGCCATAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCt                                                                                                   <  2:767398/100‑1 (MQ=255)

 aaaGCAGGCTTGGTTGCAGCCATAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCt                                                                                                   >  2:421068/1‑100 (MQ=255)

  tcgcgctgcgtggaagaccaatattaaagacagtagcggtaagccgctgtactaataaaactccagGCCGGATGCGGCGTAAAACACCGTACCCGGcc                                                                                                    >  2:1782331‑M1/67‑98 (MQ=255)

  aaGCAGGCTTGGTTGCAGCCATAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCAGTTTGTAATGCTGGATGCGGCGTAAAACAGCGTACCCGGccgg                                                                                                  <  1:2792881/100‑3 (MQ=255)

   aGCAGGCTTGGTTGCAGCCATAAGTTACTCTTCAGTTAAACGCGTTTACACAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGcc                                                                                                    >  2:2810024/1‑97 (MQ=255)

    gCAGGCTTGGTTGCAGCCATAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGa                                                                                                >  1:2899837/1‑100 (MQ=255)

    gCAGGCTTGGTTGCAGCCATAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGa                                                                                                <  2:362918/100‑1 (MQ=255)

         cTTGGTTGCAGCCATAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGtttt                                                                                           <  2:574521/100‑1 (MQ=255)

          ttGGTTTGAGCCATAATTTACGTTTCAGTTAAACGTGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTtta                                                                                          <  2:3992209/100‑1 (MQ=255)

           tGGTTGCAGCCATAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTttat                                                                                         <  1:399100/100‑1 (MQ=255)

           tGGTTGCAGCCATAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTttat                                                                                         <  2:2992453/100‑1 (MQ=255)

            ggTTGCAGCCATAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTttatt                                                                                        <  2:1390725/100‑1 (MQ=255)

            ggTTGCAGCCATAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTttatt                                                                                        <  1:1234138/100‑1 (MQ=255)

             gTTGCAGCCATAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTttatta                                                                                       >  1:149599/1‑100 (MQ=255)

             gTTGCAGCCATAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTttatta                                                                                       <  1:3199216/100‑1 (MQ=255)

              ttGCAGCCATAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAg                                                                                      <  1:3432611/100‑1 (MQ=255)

              ttGCAGCCATAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAg                                                                                      <  1:3345425/100‑1 (MQ=255)

              ttGCAGCCATAAGTTACTCTTCAGTTAAACGCGTTTACAAAGGCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAg                                                                                      <  2:2900082/100‑1 (MQ=255)

               tGCAGCCATAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGt                                                                                     >  2:2325401/1‑100 (MQ=255)

                 cAGCCATAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTAc                                                                                   <  1:2248236/100‑1 (MQ=255)

                  aGCCATAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACa                                                                                  <  1:967874/100‑1 (MQ=255)

                   gCCATAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAg                                                                                 >  2:1379804/1‑100 (MQ=255)

                   gCCATAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAg                                                                                 >  1:1848143/1‑100 (MQ=255)

                   gCCATAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAg                                                                                 >  1:2392567/1‑100 (MQ=255)

                   gCCATAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAg                                                                                 >  1:3444870/1‑100 (MQ=255)

                     cATAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGc                                                                                >  1:3510769/1‑99 (MQ=255)

                     cATAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCg                                                                               >  2:2077122/1‑100 (MQ=255)

                     cATAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCg                                                                               <  1:467300/100‑1 (MQ=255)

                      aTAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCgg                                                                              <  1:3609807/100‑1 (MQ=255)

                       tAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGc                                                                             <  1:1407584/100‑1 (MQ=255)

                        aaGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCt                                                                            <  2:1510455/100‑1 (MQ=255)

                         aGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCtt                                                                           >  1:2755400/1‑100 (MQ=255)

                         aGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCtt                                                                           >  2:850917/1‑100 (MQ=255)

                          gTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTa                                                                          >  1:3946256/1‑100 (MQ=255)

                          gTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAAGGCCGGATGCGGCGTAAAACACCGTACCCGGCGTGGAGTTTTATTAGTACAGCGGCTTa                                                                          <  2:2692703/100‑1 (MQ=255)

                             aCTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGT‑ATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGc                                                                      <  1:3358999/100‑1 (MQ=255)

                              ctctTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGc                                                                      <  1:1587717/100‑1 (MQ=255)

                              ctctTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCCGGAGTTTTATTAGTACAGCGGCTTACCGc                                                                      <  1:767830/100‑1 (MQ=255)

                               tctTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCt                                                                     >  1:4129019/1‑100 (MQ=255)

                                 ttCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTAc                                                                   <  2:1911493/100‑1 (MQ=255)

                                 ttCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTAc                                                                   >  1:106606/1‑100 (MQ=255)

                                 ttCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTAc                                                                   <  2:4065859/100‑1 (MQ=255)

                                   cAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTg                                                                 <  1:1363938/100‑1 (MQ=255)

                                    cgTTAAACGCCTTGCCAAAGTCCTTTGATAAAGCCTGATGCGGCGTAAAACACCGCACCAGGCGCGGAGTGTTAGTAGTCCAGCGGCTTACAGCCACt                                                                  >  2:4041223/2‑98 (MQ=255)

                                    aGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGt                                                                >  2:3286768/1‑100 (MQ=255)

                                    aGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGt                                                                >  2:1608167/1‑100 (MQ=255)

                                     gTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTc                                                               >  1:215239/1‑100 (MQ=255)

                                       tAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCtt                                                             >  2:1824416/1‑100 (MQ=255)

                                       tAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCtt                                                             <  1:1666950/100‑1 (MQ=255)

                                        aaaCGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCttt                                                            >  1:983929/1‑100 (MQ=255)

                                           cgcgTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAat                                                         <  2:1283159/100‑1 (MQ=255)

                                           cgcgTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAat                                                         <  2:164896/100‑1 (MQ=255)

                                            gcgTTTACAAAGGCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAat                                                         <  2:2048730/99‑1 (MQ=255)

                                                ttACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTgg                                                    <  1:69461/100‑1 (MQ=255)

                                                ttACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTgg                                                    <  1:2305959/100‑1 (MQ=255)

                                                 tACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGt                                                   >  1:309834/1‑100 (MQ=255)

                                                 tACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGt                                                   >  2:303620/1‑100 (MQ=255)

                                                     aaGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTc                                               >  1:3231484/1‑100 (MQ=255)

                                                       gTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTCCa                                             <  2:3163792/100‑1 (MQ=255)

                                                       gTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTCCa                                             <  2:1087453/100‑1 (MQ=255)

                                                        tCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTCCAc                                            <  1:3797301/100‑1 (MQ=255)

                                                         cATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTCCACg                                           <  2:504687/100‑1 (MQ=255)

                                                          aTTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTCCACGc                                          >  1:507673/1‑100 (MQ=255)

                                                           ttttGTAATGCCGGATGCGGCGTAAAACACAGTACCAAGCCTTGAGTTTCATTTGTATAGCGGCCTACGGCTACTGTCTTTATTATTTCTGTTCCACGc                                          <  2:2764016/99‑1 (MQ=255)

                                                            tttGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTCCACGCAg                                        <  2:3259232/100‑1 (MQ=255)

                                                               gTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTCCACGCAgcgc                                     <  1:1013315/100‑1 (MQ=255)

                                                                ccaggccgggtacggtgttttacgccgcatccggcCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTCCACGCAGcgcg                                    >  2:1115972‑M2/36‑100 (MQ=255)

                                                                 caggccgggtacggtgttttacgccgcatccggcCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTCCACGCAGcgcg                                    >  2:3316817‑M2/35‑99 (MQ=255)

                                                                 caggccgggtacggtgttttacgccgcatccggcCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTCCACGCAGCGCGa                                   >  1:1414959‑M2/35‑100 (MQ=255)

                                                                    GCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTCCACGCAGCGCGAAcc                                <  2:1554688‑M1/100‑1 (MQ=255)

                                                                     CCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTCCACGCAGCGCGAACCt                               <  2:1692234‑M1/100‑1 (MQ=255)

                                                                      cgggtacggtgttttacgccgcatccggcCTGGAGTTTTATTAGTAAAGCGGCTTACCGCTACTGTCTTGAATGTTGGTCTTCCACGCAGCGCGCACGTg                              >  1:3683752‑M2/30‑100 (MQ=255)

                                                                         aTGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTCCACGCAGCGCGAACCTGTTc                           >  1:457045/1‑100 (MQ=255)

                                                                          tGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTCCACGCAGCGCGAACCTGTTCa                          >  1:624774/1‑100 (MQ=255)

                                                                           gcggcgTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTCCACGCAGCGCGAACCTGTTCaa                         >  2:1162449/1‑100 (MQ=255)

                                                                            cggcgTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTCCACGCAGCGCGCACCTGTTCAAc                        >  2:3701209/1‑100 (MQ=255)

                                                                            cggcgTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTCCACGCAGCGCGAACCTGTTCAAc                        <  1:2646628/100‑1 (MQ=255)

                                                                            cggcgTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTCCACGCAGCGCGAACCTGTTCAAc                        <  2:2627619/100‑1 (MQ=255)

                                                                            cggcgTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTCCACGCAGCGCGAACCTGTTCAAc                        <  2:493698/100‑1 (MQ=255)

                                                                             ggcgTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTCCACGCAGCGCGAACCTGTTCAACt                       >  1:3817000/1‑100 (MQ=255)

                                                                               cgTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTCCACGCAGCGCGAACCTGTTCAACTac                     <  2:619381/100‑1 (MQ=255)

                                                                               cgTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTCCACGCAGCGCGAACCTGTTCAACTac                     <  2:3816975/100‑1 (MQ=255)

                                                                               cgTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTCCACGCAGCGCGAACCTGTTCAACTac                     >  1:134160/1‑100 (MQ=255)

                                                                                gTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTCCACGCAGCGCGAACCTGTTCAACTaca                    <  2:1746157/100‑1 (MQ=255)

                                                                                gTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTCCACGCAGCGCGAACCTGTTCAACTaca                    <  2:1167938/100‑1 (MQ=255)

                                                                                 tAAAACACCGTACCCGGCCTTGAGTTTTATTAGTCCAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTCCACGCAGCGCGAACCTATTCTACTacac                   <  2:2165171/100‑1 (MQ=255)

                                                                                 tAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTCCACGCAGCGCGAACCTGTTCAACTacac                   <  2:2535515/100‑1 (MQ=255)

                                                                                 tAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTCCACGCAGCGCGAACCTGTTCAACTacac                   >  1:2089368/1‑100 (MQ=255)

                                                                                 tAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTCCACGCAGCGCGAACCTGTTCAACTacac                   <  1:2103357/100‑1 (MQ=255)

                                                                                  aaaaCACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTCCACGAAGCGCGAACCTGTTCAACTACACt                  >  2:3737606/1‑100 (MQ=255)

                                                                                   aaaCACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTCCACGCAGCGCGAACCTGTTCACCTACACTa                 >  1:2815802/1‑100 (MQ=255)

                                                                                    aaCACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTCCACGCAGCGCGAACCTGTTCAACTACACTAt                >  1:883665/1‑100 (MQ=255)

                                                                                      ccccGTACCCGTCTTGGAGTTTTAGGAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGCTCTTCCACGCAGCGCGAACCTGTTCAACTACACTATcc              <  1:3226450/98‑1 (MQ=255)

                                                                                      cacCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTCCACGCAGCGCGAACCTGTTCAACTACACTATcc              <  2:3417427/100‑1 (MQ=255)

                                                                                            aCCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTCCACGCAGCGCGAACCTGTTCAACTACACTATCCGGCAgg        <  1:1107363/100‑1 (MQ=255)

                                                                                              ccggcCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTCCACGCAGCGCGAACCTGTTCAACTACACTATCCGGCAGGCt      <  2:3241143‑M2/95‑1 (MQ=255)

                                                                                                ggcCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTCCACGCAGCGCGAACCTGTTCAACTACACTATCCGGCAGGCTgg    <  1:831080‑M2/97‑1 (MQ=255)

AAAAGCAGGCTTGGTTGCAGCCATAAGTTACTCTTCAGTTAAACGCGTTTACAAAGTCATTTTGTAATGCCGGATGCGGCGTAAAACACCGTACCCGGCCTGGAGTTTTATTAGTACAGCGGCTTACCGCTACTGTCTTTAATATTGGTCTTCCACGCAGCGCGAACCTGTTCAACTACACTATCCGGCAGGCTGGCG  >  NC_000913/3910375‑3910572

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.