New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 4613554171 (1.160)7 (0.050) 5/170 NT 3.9% coding (74/780 nt) yjjV putative DNase
?NC_000913 = 4613578 184 (1.310)coding (98/780 nt) yjjV putative DNase
Rejected: Frequency below cutoff threshold.

Only 100 of 225 total aligned reads displayed.

GCTTGATTTGCCGTTTTATCGACACCCACTGCCATTTTGATTTCCCGCCGTTTAGTGGCGATGAAGAGGCCAGCCTGCAACGCGCGGCACAAGCGGGCGTAGGCAAGATCATTGTTCCGGCAACAGAGGCGGAAAATTTTGCCCGTGTGTTGGCATTAGCGGAAAATTATCAACCGCTGTATGCCGCATTGGGCTTGCA  >  NC_000913/4613479‑4613677
                                                                                                   |                                                                                                   
gCTTGATTTGCCGTTTTATCGACACCCACTGCCATTTTGATTTCCCGCCGTTTAGTGGCGATGAAGAGGCCAGCCTGCAACGCGCGGCACAAGCGGGCGt                                                                                                     >  1:1653394/1‑100 (MQ=255)
gCTTGATTTGCCGTTTTATCGACACCCACTCCCATTTTGATTTCCCGCCGTTTAGTGGCGATGAAGAGGCCAGCCTGCAACGCGCGGCACAAGCGGGCGt                                                                                                     >  2:2390671/1‑100 (MQ=255)
 cTTGATTTGCCGTTTTATCGACACCCACTGCCATTTTGATTTCCCGCCGTTTAGTGGCGATGAAGAGGCAAGCCTGCAACGCGCGGCACAAGCGGGCGTa                                                                                                    <  2:3305978‑M2/100‑2 (MQ=255)
   tGATTTGCCGTTTTATCGACACCCACTGCCATTTTGATTTCCCGCCGTTTAGTGGCGATGAAGAGGCCAGCCTGCAACGCGCGGCACAAGCGGGCGTagg                                                                                                  >  1:986850‑M2/1‑97 (MQ=255)
    gATTTGCCGTTTTATCGACACCCACTGCCATTTTGATTTCCCGCCGTTTAGTGGCGATGAAGAGGCCAGCCTGCAACGCGCGGCACAAGCGGGCGTaggc                                                                                                 >  1:280826‑M2/1‑96 (MQ=255)
     aTTTGCCGTTTTATCGACACCCACTGCCATTTTGATTTCCCGCCGTTTAGTGGCGATGAAGAGGCCAGCCTGCAACGCGCGGCACAAGCGGGCGTAGGCa                                                                                                <  1:3438342/100‑1 (MQ=255)
       ttGCCGTTTTATCGACACCCACTGCCATTTTGATTTCCCGCCGTTTAGTGGCGATGAAGAGGCCAGCCTGCAACGCGCGGCACAAGCGGGCGTAGGCAAg                                                                                              <  2:258643/100‑1 (MQ=255)
       ttGCCGTTTTATCGACACCCACTGCCATTTTGATTTCCCGCCGTTTAGTGGCGATGAAGAGGCCAGCCTGCAACGCGCGGCACAAGCGGGCGTAGGCAAg                                                                                              <  2:248270/100‑1 (MQ=255)
       ttGCCGTTTTATCGACACCCACTGCCATTTTGATTTCCCGCCGTTTAGTGGCGATGAAGAGGCCAGCCTGCAACGCGCGGCACAAGCGGGCGTAGGCAAg                                                                                              <  1:1182727/100‑1 (MQ=255)
         gCCGTTTTATCGACACCCACTGCCATTTTGATTTCCCGCCGTTTAGTGGCGATGAAGAGGCCAGCCTGCAACGCGCGGCACAAGCGGGCGTAGGCAAGAt                                                                                            >  1:387829/1‑100 (MQ=255)
          ccGTTTTATCGACACCCACTGCCATTTTGATTTCCCGCCGTTTAGTGGCGATGAAGAGGCCAGCCTGCAACGCGCGGCACAAGCGGGCGTAGGCAAGATc                                                                                           >  2:2885160/1‑100 (MQ=255)
          ccGTTTTATCGACACCCACTGCCATTTTGATTTCCCGCCGTTTAGTGGCGATGAAGAGGCCAGCCTGCAACGCGCGGCACAAGCGGGCGTAGGCAAGATc                                                                                           >  1:1815723/1‑100 (MQ=255)
          ccGTTTTATCGACACCCACTGCCATTTTGATTTCCCGCCGTTTAGTGGCGATGAAGAGGCCAGCCTGCAACGCGCGGCACAAGCGGGCGTAGGCAAGATc                                                                                           <  1:1502881/100‑1 (MQ=255)
          ccGTTTTATCGACACCCACTGCCATTTTGATTTCCCGCCGTTTAGTGGCGATGAAGAGGCCAGCCTGCAACGCGCGGCACAAGCGGGCGTAGGCAAGATc                                                                                           >  2:3568722/1‑100 (MQ=255)
          ccGTTTTATCGACACCCACTGCCATTTTGATTTCCCGCCGTTTAGTGGCGATGAAGAGGCCAGCCTGCAACGCGCGGCACAAGCGGGCGTAGGCAAGATc                                                                                           >  2:4097168/1‑100 (MQ=255)
           cGTTTTATCGACACCCACTGCCATTTTGATTTCCCGCCGTTTAGTGGCGATGAAGAGGCCAGCCTGCAACGCGCGGCACAAGCGGGCGTAGGCAAGATCa                                                                                          <  1:1552895/100‑1 (MQ=255)
           cGTTTTATCGACACCCACTGCCATTTTGATTTCCCGCCGTTTAGTGGCGATGAAGAGGCCAGCCTGCAACGCGCGGCACAAGCGGGCGTAGGCAAGATCa                                                                                          >  1:3208696/1‑100 (MQ=255)
            gTTTTATCGACACCCACTGCCATTTTGATTTCCCGCCGTTTAGTGGCGATGCAGAGGACAGGCTGCAACGCTCGGCACAGGCGGGCGTaggcga                                                                                               <  2:2840841‑M2/94‑7 (MQ=255)
             ttttATCGACACCCACTGCCATTTTGATTTCCCGCCGTTTAGTGGCGATGAAGAGGCCAGCCTGCAACGCGCGGCACAAGCGGGCGTAGGCAAGATCAtt                                                                                        <  2:2000327/100‑1 (MQ=255)
             ttttATCGACACCCACTGCCATTTTGATTTCCCGCCGTTTAGTGGCGATGAAGAGGCCAGCCTGCAACGCGCGGCACAAGCGGGCGTAGGCAAGATCAtt                                                                                        <  1:1021810/100‑1 (MQ=255)
              tttATCGACACCCACTGCCATTTTGATTTGCCGTAGTTTAGTGGCGATGAAGAGGCCAGCCTGAAACGCGCGGCACAAGCGGGCGTAGGCAAGATCATTg                                                                                       <  2:793329/100‑1 (MQ=255)
                tATCGACACCCACTGCCATTTTGATTTCCCGCCGTTTAGTGGCAATGAAGAGTCCAGCTTGCAACGCGCGGCACAAGCGGGCGTAGGCAACATACTTGtt                                                                                     >  2:1036853/1‑100 (MQ=255)
                    gACACCCACTGCCATTTTGATTTCCCGCCGTTTAGTGGCGATGCAGAGGCCAGCCTGCAACGCGCGTCACAAGCGGGCGTAGGCAAGCTCATTGTTcc                                                                                   >  2:1304622/1‑98 (MQ=255)
                    gACACCCACTGCCATTTTGATTTCCCGCCGTTTAGTGGCGATGCAGAGGCCAGCCTGCAACGCGCGGCACACGCGGGCGTAGCCAAGATCATTGTTCCg                                                                                  >  2:1061463/1‑99 (MQ=255)
                    gACACCCACTGCCATTTTGATTTCCCGCCGTTTAGTGGCGATGAAGAGGCCAGCCTGCAACGCGCGGCACAAGCGGGCGTAGGCAAGATCATTGTTCCgg                                                                                 >  1:2106220/1‑100 (MQ=255)
                    gACACCCACTGCCATTTTGATTTCCCGCCGTTTAGTGGCGATGAAGAGGCCAGCCTGCAACGCGCGGCACAAGCGGGCGTAGGCAAGATCATTGTTCCgg                                                                                 <  2:751652/100‑1 (MQ=255)
                     acacCCACTGCCATTTTGATTTCCCGCCGTTTAGTGGCGATGAAGAGGCCAGCCTGCAACGCGCGGCACAAGCGGGCGTAGGCAAGATCATTGTTCCGGc                                                                                <  1:2198022/100‑1 (MQ=255)
                      cacCCACTGCCATTTTGATTTCCCGCCGTTTAGTGGCGATGAAGAGGCCAGCCTGCAACGCGCGGCACAAGCGGGCGTAGGCAAGATCATTGTTCCGGCa                                                                               <  2:3001522/100‑1 (MQ=255)
                        cccACTGCCATTTTGATTTCCCGCCGTTTAGTGGCGATGAAGAGGCCAGCCTGCAACGCGCGGCACAAGCGGGCGTAGGCAAGATCATTGTTCCGGCAAc                                                                             >  1:1925987/1‑100 (MQ=255)
                          cACTGCCATTTTGATTTCCCGCCGTTTAGTGGCGATGAAGAGGCCAGCCTGCAACGCGCGGCACAAGCGGGCGTAGGCAAGATCATTGTTCCGGCAACag                                                                           <  2:3955096/100‑1 (MQ=255)
                           aCTGCCATTTTGATTTCCCGCCGTTTAGTGGCGATGAAGAGGCCAGCCTGCAACGCGCGGCACAAGCGGGCGTAGGCAAGATCATTGTTCCGGCAACaga                                                                          <  2:2114487/100‑1 (MQ=255)
                             tGCCATTTTGATTTCCCGCCGTTTAGTGGCGATGAAGAGGCCAGCCTGCAACGCGCGGCACAAGCGGGCGTAGGCAAGATCATTGTTCCGGCAACAGAgg                                                                        <  1:2149510/100‑1 (MQ=255)
                              gCCATTTTGATTTCCCGCCGTTTAGTGGCGATGAAGAGGCCAGCCTGCAACGCGCGGCACAAGCGGGCGTAGGCAAGATCATTGTTCCGGCAACAGAGGc                                                                       <  1:3228551/100‑1 (MQ=255)
                               ccATTTTGATTTCCCGCCGTTTAGTGGCGATGAAGAGGCCAGCCTGCAACGCGCGGCACAAGCGGGCGTAGGCAAGATCATTGTTCCGGCAACAGAGGCg                                                                      <  1:2878875/100‑1 (MQ=255)
                                 aTTTTGATTTCCCGCCGTTTAGTGGCGATGAAGAGGCCAGCCTGCAACGCGCGGCACAAGCGGGCGTAGGCAAGATCATTGTTCCGGCAACAGAGGCgg                                                                     >  2:1392433/1‑99 (MQ=255)
                                 aTTTTGATTTCCCGCCGTTTAGTGGCGATGAAGAGGCCAGCCTGCAACGCGCGGCACAAGCGGGCGTAGGCAAGATCATTGTTCCGGCAACAGAGGCGGa                                                                    >  2:215343/1‑100 (MQ=255)
                                 aTTTTGATTTCCCGCCGTTTAGTGGCGATGAAGAGGCCAGCCTGCAACGCGCGGCACAAGCGGGCGTAGGCAAGATCATTGTTCCGGCAACAGAGGCGGa                                                                    <  1:10059/100‑1 (MQ=255)
                                     tGATTTCCCGCCGTTTAGTGGCGATGAAGAGGCCAGCCTGCAACGCGCGGCACAAGCGGGCGTAGGCAAGATCATTGTTCCGGCAACAGAGGCGGAAAAt                                                                <  2:1769422/100‑1 (MQ=255)
                                      gATTTCCCGCCGTTTAGTGGCGATGAAGAGGCCAGCCTGCAACGCGCGGCACAAGCGGGCGTAGGCAAGATCATTGTTCCGGCAACAGAGGCGGAAAAtt                                                               <  1:23216/100‑1 (MQ=255)
                                       aTTTCCCGCCGTTTAGTGGCGATGAAGAGGCCAGCCTGCAACGCGCGGCACAAGCGGGCGTAGGCAAGATCATTGTTCCGGCAACAGAGGCGGAAAAttt                                                              <  1:784439/100‑1 (MQ=255)
                                       aTTTCCCGCCGTTTAGTGACGATGAAGAGGCCAGCCTGCAACGCGCGGCACAAGCGGGCGTAGGCAAGATCATTGTTCCGGCAACAGAGGCGGAAAAttt                                                              >  2:436139/1‑100 (MQ=255)
                                        tttCCCGCCGTTTAGTGGCGATGAAGAGGCCAGCCTGCAACGCGCGGCACAAGCGGGCGTAGGCAAGATCATTGTTCCGGCAACAGAGGCGGAAAAtttt                                                             <  1:2634780/100‑1 (MQ=255)
                                           cccGCCCCTTAAAGGCGATGAAGAGGCCAGCCTGCCACCCGCGGCACAAACGGGCGTAGGAAAGATCATTGTTCCCGCGAGGGCGGCGGAGGATTTTg                                                            >  2:1153790/1‑98 (MQ=255)
                                             cgccgTTTAGTGGCGATGAAGAGGCCAGCCTGCAACGCGCGGCACGGGCGGGCGTAGGCAAGATCATTGTTCCGGCAACAGAGGCGGAAAATTTTGCCCg                                                        >  2:2135524/1‑100 (MQ=255)
                                                 gTTTAGTGGCGATGAAGAGGCCAGCCTGCAACGCGCGGCACAAGCGGGCGTAGGCAAGATCATTGTTCCGGCAACAGAGGCGGAAAATTTTGCCCgtgtg                                                    >  1:3079990/1‑100 (MQ=255)
                                                 gTTTAGTGGCGATGAAGAGGCCAGCCTGCAACGCGCGGCACAAGCGGGCGTAGGCAAGATCATTGTTCCGGCAACAGAGGCGGAAAATTTTGCCCgtgtg                                                    >  1:3641545/1‑100 (MQ=255)
                                                   ttAGTGGCGATGAAGAGGCCAGCCTGCAACGCGCGGCACAAGCGGGCGTAGGCAAGATCATTGTTCCGGCAACAGAGGCGGAAAATTTTGCCCGTGTGtt                                                  <  1:1127570/100‑1 (MQ=255)
                                                    tAGTGGCGATGAAGAGACCAGCCTGCAACGCGCGGCACAAGCGGGCGTAGGCAAGATCATTGTTCCGGCAACAGAGGCGGAAAATTTTGCCCGTGTGTTg                                                 <  1:313691/100‑1 (MQ=255)
                                                     aGTGGCGATGAAGAGGCCAGCCTGCAACGCGCGGCACAAGCGGGCGTAGGGAAGAGCATTGTTCCGGCAACAGAGGCGGAAAATTTTGCCCGTGTGTTgg                                                <  1:905369/100‑1 (MQ=255)
                                                     aGTGGCGATGAAGAGGCCAGCCTGCAACGCGCGGCACAAGCGGGCGTAGGCAAGATCATTGTTCCGGCAACAGAGGCGGAAAATTTTGCCCGTGTGTTgg                                                >  2:1866039/1‑100 (MQ=255)
                                                      gTGGCGATGAAGAGGCCAGCCTGCAACGCGCGGCACAAGCGGGCGTAGGCAAGATCATTGTTCCGGCAACAGAGGCGGAAAATTTTGCCCGTGTGTTGGc                                               >  1:1889420/1‑100 (MQ=255)
                                                       tGGCGATGAAGAGGCCAGCCTGCAACGCGCGGCACAAGCGGGCGTAGGCAAGATCATTGTTCCGGCAACAGAGGCGGAAAATTTTGCCCGTGTGTTGGCa                                              >  1:3849447/1‑100 (MQ=255)
                                                        ggCGATGAAGAGGCCAGCCTGCAACGCGCGGCACAAGCGGGCGTAGGCAAGATCATTGTTCCGGCAACAGAGGCGGAAAATTTTGCCCGTGTGTTGGCAt                                             >  2:565091/1‑100 (MQ=255)
                                                        ggCGATGAAGAGGCCAGCCTGCAACGCGCGGCACAAGCGGGCGTAGGCAAGATCATTGTTCCGGCAACAGAGGCGGAAAATTTTGCCCGTGTGTTGGCAt                                             >  1:1589591/1‑100 (MQ=255)
                                                         gCGATGAAGAGGCCAGCCTGCAACGCGCGGCACAAGCGGGCGTAGGCAAGATCATTGTTCCGGCAACAGAGGCGGAAAATTTTGCCCGTGTGTTGGCAtt                                            <  2:61716/100‑1 (MQ=255)
                                                           gATGAAGAGGCCAGCCTGCAACGCGCGGCACAAGCGGGCGTAGGCAAGATCATTGTTCCGGCAACAGAGGCGGAAAATTTTGCCCGTGTGTTGGCATTAg                                          >  1:642155/1‑100 (MQ=255)
                                                            aTGAAGAGGCCAGCCTGCAACGCGCGGCACAAGCGGGCGTAGGCAAGATCATTGTTCCGGCAACAGAGGCGGAAAATTTTGCCCGTGTGTTGGCATTAGc                                         <  2:1646633/100‑1 (MQ=255)
                                                             tGAAGAGGCCAGCCTGCAACGCGCGGCACAAGCGGGCGTAGGCAAGATCATTGTTCCGGCAACAGAGGCGGAAAATTTTGCCCGTGTGTTGGCATTAGCg                                        <  1:3369766/100‑1 (MQ=255)
                                                             tGAAGAGGCCAGCCTGCAACGCGCGGCACAAGCGGGCGTAGGCAAGATCATTGTTCCGGCAACAGAGGCGGAAAATTTTGCCCGTGTGTTGGCATTAGCg                                        <  2:1488409/100‑1 (MQ=255)
                                                             tGAAGAGGCCAGCCTGCAACGCGCGGCACAAGCGGGCGTAGGCAAGATCATTGTTCCGGCAACAGAGGCGGAAAATTTTGCCCGTGTGTTGGCATTAGCg                                        >  1:3989066/1‑100 (MQ=255)
                                                                   ggCCAGCCTGCAACGCGCGGCACAAGCGGGCGTcggctggcctcttcatcgccactaaacggcgggaaatcaaaatggcagtgggtgtcgataaaacggc                                  <  2:2727126‑M2/100‑68 (MQ=255)
                                                                   ggCCAGCCTGCAACGCGCGGCACAAGCGGGCGTAGGCAAGATCATTGTTCCGGCAACAGAGGCGGAAAATTTTGCCCGTGTGTTGGCATTAGCGGAAAAt                                  >  1:3178525/1‑100 (MQ=255)
                                                                     ccAGCCTGCAACGCGCGGCACAAGCGGGCGTAGGCAAGATCATTGTTCCGGCAACAGAGGCGGAAAATTTTGCCCGTGTGTTGGCATTAGCGGAAAATTa                                <  2:3255938/100‑1 (MQ=255)
                                                                     ccAGCCTGCAACGCGCGGCACAAGCGGGCGTAGGCAAGATCATTGTTCCGGCAACAGAGGCGGAAAATTTTGCCCGTGTGTTGGCATCAGCGGAAAATTa                                <  2:2890958/100‑1 (MQ=255)
                                                                     caaGCCTGCAACGAGCGGCACAAGCGGGCGTCGGCAAGATCATTGTTCCGGCAACAGAGGCGGAAAATTTTGCCCGTGTGTTGGCATTAGCGGAAAATTa                                >  1:2783982/3‑100 (MQ=255)
                                                                      cAGCCTGCAACGCGCGGCACAAGCGGGCGTAGGCAAGATCATTGTTCCGGCAACAGAGGCGGAAAATTTTGCCCGTGTGTTGGCATTAGCGGAAAATTAt                               >  1:3270502/1‑100 (MQ=255)
                                                                       aGCTTGCAACGCGCGGCACAAGCGGGCGTAGGCAAGATCATTGTTCCGGCAACAGAGGCGGAAAATTTTGCCCGTGTGTTGGCATTAGCGGAAAATTATc                              <  2:3527404/100‑1 (MQ=255)
                                                                       aGCCTGCAACGCGCGGCACAAGCGGGCGTAGGCAAGATCATTGTTCCGGCAACAGAGGCGGAAAATTTTGCCCGTGTGTTGGCATTAGCGGAAAATTATc                              <  1:161603/100‑1 (MQ=255)
                                                                        gCCTGCAACGCGCGGCACAAGCGGGCGTAGGCAAGATCATTGTTCCGGCAACAGAGGCGGAAAATTTTGCCCGTGTGTTGGCATTAGCGGCAAATTATCa                             >  2:3310060/1‑100 (MQ=255)
                                                                         ccTGCAACGCGCGGCACAAGCGGGCGTAGGCAAGATCATTGTTCCGGCAACAGAGGCGGAAAATTTTGCCCGTGTGTTGGCATTAGCGGAAAATTATCaa                            >  2:1539614/1‑100 (MQ=255)
                                                                           tGCAACGCGCGGCACAAGCGGGCGTAGGCAAGATCATTGTTCCGGCAACAGAGGCGGAAAATTTTGCCCGTGTGTTGGCATTAGCGGAAAATTATCAAcc                          <  1:2412866/100‑1 (MQ=255)
                                                                           tGCAACGCGCGGCACAAGCGGGCGTAGGCAAGATCATTGTTCCGGCAACAGAGGCGGAAAATTTTGCCCGTGTGTTGGCATTAGCGGAAAATTATCAAcc                          <  1:1557489/100‑1 (MQ=255)
                                                                           tGCAACGCGCGGCACAAGCGGGCGTAGGCAAGATCATTGTTCCGGCAACAGAGGCGGAAAATTTTGCCCGTGTGTCGGCATTAGCGGAAAATTATCAAcc                          <  1:2167653/100‑1 (MQ=255)
                                                                               aCGCGCGGCACAAGCGGGCGTAGGCAAGATCATTGTTCCGGCAACAGAGGCGGAAAATTTTGCCCGTGTGTTGGCATTAGCGGAAAATTATCAACCGCTg                      <  1:2334689/100‑1 (MQ=255)
                                                                                cgcgcgGCACAAGCGGGCGTAGGCAAGATCATTGTTCCGGCAACAGAGGCGGAAAATTTTGCCCGTGTGTTGGCATTAGCGGAAAATTATCAACCGCTGt                     >  1:2016230/1‑100 (MQ=255)
                                                                                cgcgcgGCACAAGCGGGCGTAGGCAAGATCATTGTTCCGGCAACAGAGGCGGAAAATTTTGCCCGTGTGTTGGCATTAGCGGAAAATTATCAACCGCTGt                     <  1:486573/100‑1 (MQ=255)
                                                                                 gcgcgGCACAACCGGGCGTAGGCAAGATCATTGTTCCGGCAACAGAGGCGGAAAATTTTGCCCGTCTGTTGGCATTAGCGGAAAATTATCAACCGCTGTa                    >  2:2165085/1‑100 (MQ=255)
                                                                                  cgcgGCACAAGCGGGCGTAGGCAAGATCATTGTTCCGGCAACAGAGGCGGAAAATTTTGCCCGTGTGTTGGCATTAGCGGAAAATTATCAACCGCTGTAt                   >  1:2547076/1‑100 (MQ=255)
                                                                                  cgcgGCACAAGCGGGCGTAGGCAAGATCATTGTTCCGGCAACAGAGGCGGAAAATTTTGCCCGTGTGTTGGCATTAGCGGAAAATTATCAACCGCTGTAt                   >  2:3910404/1‑100 (MQ=255)
                                                                                  cgcgGCACAAGCGGGCGTAGGCAAGATCATTGTTCCGGCAACAGAGGCGGAAAATTTTGCCCGTGTGTTGGCATTAGCGGAAAATTATCAACCGCTGTAt                   >  1:1308723/1‑100 (MQ=255)
                                                                                    cgGCACAAGCGGGCGTAGGCAAGATCATTGTTCCGGCAACAGAGGCGGAAAATTTTGCCCGTGTGTTGGCATTAGCGGAAAATTATCAACCGCTGTATGc                 >  1:2434096/1‑100 (MQ=255)
                                                                                     ggCACAAGCGGGCGTAGGCAAGATCATTGTTCCGGCAACAGAGGCGGAAAATTTTGCCCGTGTGTTGGCATTAGCGGAAAATTATCAACCGCTGTATGcc                >  2:2071817/1‑100 (MQ=255)
                                                                                     ggCACAAGCGGGCGTAGGCAAGATCATTGTTCCGGCAACAGAGGCGGAAAATTTTGCCCGTGTGTTGGCATTAGCGGAAAATTATCAACCGCTGTATGcc                <  1:3539922/100‑1 (MQ=255)
                                                                                      gCACAAGCGGGCGTAGGCAAGATCATTGTTCCGGCAACAGAGGCGGAAAATTTTGCCCGTGTGTTGGCATTAGCGGAAAATTATCAACCGCTGTATGCCg               >  2:3824990/1‑100 (MQ=255)
                                                                                         caAGCGGGCGTAGGCAAGATCATTGTTCCGGCAACAGAGGCGGAAAATTTTGCCCGTGTGTTGGCATTAGCGGAAAATTATCAACCGCTGTATGCCGCAt            >  2:4736/1‑100 (MQ=255)
                                                                                           aGCGGGCGTAGGCAAGATCATTGTTCCGGCAACAGAGGCGGAAAATTTTGCCCGTGTGTTGTCATTAGCGGAAAATTATCAACCGCTGTATGCCGCATTg          <  2:2538070/100‑1 (MQ=255)
                                                                                           aGCGGGCGTAGGCAAGATCATTGTTCCGGCAACAGAGGCGGAAAATTTTGCCCGTGTGTTGGCATTAGCGGAAAATTATCAACCGCTGTATGCCGCATTg          <  2:387826/100‑1 (MQ=255)
                                                                                            ccgcgCGTAGGCAAGATCATTGTTCCGGCAACAGAGGCGGAAAATTTTGCCCGTGTGTTGGCATTAGCGGAAAATTATCAACCGCTGTATGCCGCATTgg         <  2:3366333/96‑1 (MQ=255)
                                                                                             cGGGCGTAGGCAAGATTATTGTTCCGGCAACTGAGGCGGAAAATTTTGCCCGTGTGTTGGCATTAGCGGAAAATTATCAACCGTTGTATGCCGCATTg          <  1:842121/98‑1 (MQ=255)
                                                                                              gggCGTAGGCAAGATCATTGTTCCGGCAACAGAGGCGGAAAATTTTGCCCGTGTGTTGGCATTAGCGGAAAATTATCAACCGCTGTATGCCGCATTGGGc       <  1:509729/100‑1 (MQ=255)
                                                                                               ggCGTAGGCAAGATCATTGTTCCGGCAACAGAGGCGGAAAATTTTGCCCGTGTGTTGGCATTAGCGGAAAATTATCAACCGCTGTATGCCGCATTGGGCt      >  2:1683935/1‑100 (MQ=255)
                                                                                               ggCGTAGGCAAGATCATTGTTCCGGCAACAGAGGCGGAAAATTTTGCCCGTGTGTTGGCATTAGCGGAAAATTATCAACCGCTGTATGCCGCATTGGGCt      <  1:2693695/100‑1 (MQ=255)
                                                                                               ggCGTAGGCAAGATCATTGTTCCGGCAACAGAGGCGGAAAATTTTGCCCGTGTGTTGGCATTAGCGGAAAATTATCAACCGCTGTATGCCGCATTGGGCt      <  2:1589579/100‑1 (MQ=255)
                                                                                               ggCGTAGGCAAGACCATTGTTCCGGCAACAGAGGCGGAAAATTTTGCCCGTGTGTTGGCATTAGCGGAAAATTATCAACCGCTGTATGCCGCATTGGGCt      >  1:1372976/1‑100 (MQ=255)
                                                                                                gCGTAGGCAAGATCATTGTTCCGGCAACAGATGCGGAAAATTTTGCCCGTGTGTTCGCATTAGCGGAAAATTATCAACCGCTGTATGCCGCATTGGGc       <  2:1016392/98‑1 (MQ=255)
                                                                                                 cGTAGGCAAGATCATTGTTCCGGCAACAGAGGCGGAAAATTTTGCCCGTGTGTTGGCATTAGCGGAAAATTATCAACCGCTGTATGCCGCATTGGGCTTg    <  1:381379/100‑1 (MQ=255)
                                                                                                   tAGGCAAGATCATTGTTCCGGCAACAGAGGCGGAAAATTTTGCCCGTGTGTTGGCATTAGCGGAAAATTATCAACCGCTGTATGCCGCATTGGGCTTGCa  >  1:4109030/1‑100 (MQ=255)
                                                                                                   tAGGCAAGATCATTGTTCCGGCAACAGAGGCGGAAAATTTTGCCCGTGTGTTGGCATTAGCGGAAAATTATCAACCGCTGTATGCCGCATTGGGCTTGCa  <  1:436142/100‑1 (MQ=255)
                                                                                                   tAGGCAAGATCATTGTTCCGGCAACAGAGGCGGAAAATTTTGCCCGTGTGGTGGCATTAGCGGAAAATTATCAACCGCTGTATGCCGCATTGGGCTTGCa  <  2:346189/100‑1 (MQ=255)
                                                                                                   tAGGCAAGATCATTGTACCGGCAATATAGCCGCAAAATTTTGCCCGTGTGTTGACATTAGCGGAAAATTATCAACCGCTGTATGCCGCATTGGGc       <  2:4001869/95‑1 (MQ=255)
                                                                                                   |                                                                                                   
GCTTGATTTGCCGTTTTATCGACACCCACTGCCATTTTGATTTCCCGCCGTTTAGTGGCGATGAAGAGGCCAGCCTGCAACGCGCGGCACAAGCGGGCGTAGGCAAGATCATTGTTCCGGCAACAGAGGCGGAAAATTTTGCCCGTGTGTTGGCATTAGCGGAAAATTATCAACCGCTGTATGCCGCATTGGGCTTGCA  >  NC_000913/4613479‑4613677

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.