New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 4627204160 (1.080)7 (0.050) 6/162 NT 4.4% coding (1293/1383 nt) radA DNA repair protein
?NC_000913 = 4627223 156 (1.160)coding (1312/1383 nt) radA DNA repair protein
Rejected: Frequency below cutoff threshold.

Only 100 of 209 total aligned reads displayed.

GAGATCCGCCCGGTGCCCAGCGGTCAGGAACGAATCTCTGAAGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGACGCGCTTAGCGTGTTCGACGACTTATAATGAGATATACGGAGGGAGATATGTCGT  >  NC_000913/4627124‑4627321
                                                                                                   |                                                                                                  
gagaTCCGCCCGGTGCCCAGCGGTCAGGAACGAATCTCTGAAGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAg                                                                                                    >  2:362475/1‑100 (MQ=255)
gagaTCCGCCCGGGGCCCAGCGGTCAGGAACGAATCTCTGAAGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAg                                                                                                    <  2:2882732/100‑1 (MQ=255)
  gaTCCGCCCGGTGCCCAGCGGTCAGGAACGAATCTCTGAAGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGcg                                                                                                  <  2:4126684‑M2/100‑3 (MQ=255)
  gaTCCGCCCGGTGCCCAGCGGTCAGGAACGAATCTCTGAAGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGcg                                                                                                  <  1:744589‑M2/100‑3 (MQ=255)
   aTCCGCCCGGTGCCCAGCGGTCAGGAACGAATCTCTGAAGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGcgc                                                                                                 <  1:1202970‑M2/100‑4 (MQ=255)
   aTCCGCCCGGTGCCCAGCGGTCAGGAACGAATCTCTGAAGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCCGGCCGCTAACGTGTCGAAAAAAGcg                                                                                                  <  2:2568935‑M2/99‑3 (MQ=255)
    tCCGCCCGGTGCCCAGCGGTCAGGAACGAATCTCTGAAGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGcgcc                                                                                                >  1:503808‑M2/1‑96 (MQ=255)
    tCCGCCCGGTGCCCAGCGGTCAGGAACGAATCTCTGAAGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGccc                                                                                                 <  2:1302329‑M2/99‑4 (MQ=255)
     ccGCCCGGTGCCCAGCGGTCAGGAACGAATCTCTGAAGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGcgccg                                                                                               <  2:2340067‑M2/100‑6 (MQ=255)
     ccGCCCGGTGCCCAGCGGTCAGGAACGAATCTCTGAAGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGcgccg                                                                                               <  1:1437661‑M2/100‑6 (MQ=255)
     ccGCCCGGTGCCCAGCGGTCAGGAACGAATCTCTGAAGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGcgccg                                                                                               <  1:3284521‑M2/100‑6 (MQ=255)
       gCCCGGTGCCCAGCGGTCAGGAACGAATCTCTGAAGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGcgccgga                                                                                             >  2:1396524‑M2/1‑93 (MQ=255)
         ccGGTGCCCAGCGGTCAGGAACGAATCTCTGAAGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAg                                                                                           >  1:587683/1‑100 (MQ=255)
          cGGTGCCCAGCGGTGAGGAACGAATCTCTGAAGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAgg                                                                                          <  2:1825765/100‑1 (MQ=255)
           ggTGCCCAGCGGTCAGGAACGAATCTCTGAAGCGGCGCAACACGGTTTTCGACGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGcgccg                                                                                               >  2:3923245‑M2/1‑89 (MQ=255)
           ggTGCCCAGCGGTCAGGAACGAATCTCTGAAGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAggg                                                                                         <  1:3028719/100‑1 (MQ=255)
           ggTGCCCAGCGGTCAGGAACGAATCTCTGAAGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAggg                                                                                         >  1:2956366/1‑100 (MQ=255)
              gCCCAGCGGTCAGGAACGAATCTCTGAAGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATg                                                                                      <  1:1677717/100‑1 (MQ=255)
               cccAGCGGTCAGGAACGAATCTCTGAAGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCTAAAAAAGCGCCGGAAGGGATGc                                                                                     >  2:185762/1‑100 (MQ=255)
                ccAGCGGTCAGGAACGAATCTCTGAAGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCa                                                                                    >  1:3629687/1‑100 (MQ=255)
                ccAGCGGTCAGGAACGAATCTCTGAAGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCa                                                                                    >  1:1740668/1‑100 (MQ=255)
                   gCGGTCAGGCAAGAGTCGGTGAAGCGGCGAAACACGGTGTTCGCGGGGCGGTTGGGCGGGCGGGTAACGTGGCGAACGAAGCGCCGGAAGGGATGCAGAt                                                                                 <  2:653143/100‑1 (MQ=255)
                     ggTCAGGAACGAATCTCTGAAGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGAttt                                                                               >  1:635473/1‑100 (MQ=255)
                      gTCAGGAACGAATCTCTGAAGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGAtttt                                                                              >  1:3891737/1‑100 (MQ=255)
                      gTCAGGAACGAATCTCTGAAGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGAtttt                                                                              >  1:3774215/1‑100 (MQ=255)
                       tCAGGAACGAATCTCTGAAGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGAttttt                                                                             <  2:710174/100‑1 (MQ=255)
                        cAGGAACGAATCTCTGAAGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTg                                                                            >  1:2242158/1‑100 (MQ=255)
                         aGGAACGAATCTCTGAAGCGGCGAAACAAGGTTTTCGACGGGCGATTGTTCCGGCGAAAAAAAAAAAAAAAAAAGCGCCGGAAGGGATGCAGATTTTTgg                                                                           <  2:1753519/100‑1 (MQ=255)
                          ggAACGAATCTCTGAAGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGc                                                                          >  1:554307/1‑100 (MQ=255)
                          ggAACGAATCTCTGAAGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGc                                                                          >  1:1405692/1‑100 (MQ=255)
                          ggAACGAATCTCTGAAGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGc                                                                          >  1:4043445/1‑100 (MQ=255)
                           gAACGAATCTCTGAAGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGAAAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCg                                                                         <  2:3781142/100‑1 (MQ=255)
                                  tctcTGAAGCGGCGGAACACGGTTTTCGCGGGGCGATTGGTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTaaaa                                                                   <  2:3663942/99‑1 (MQ=255)
                                    tctGAAGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAAc                                                                <  1:2265161/100‑1 (MQ=255)
                                    tctGAAGCGGCGAAACACGGTTTTCGCCGGGCGATTGTGCCGGCGGCTAACGTGTCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAAc                                                                <  1:1955112/100‑1 (MQ=255)
                                     ctGAAGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAAct                                                               <  1:4126711/100‑1 (MQ=255)
                                     ctGAAGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAAct                                                               >  2:1900156/1‑100 (MQ=255)
                                      tGAAGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAActc                                                              <  1:2003567/100‑1 (MQ=255)
                                       gAAGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAActct                                                             <  1:3076058/100‑1 (MQ=255)
                                         aGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTcc                                                           >  1:3373642/1‑100 (MQ=255)
                                          gcggcgAAAGGCGTTTTTCGCCGGGCGAGGGTTTCGGCGGCAATCGTGCTGAAAAAAGCGCCGGAAGGGATCCCGATTGTTGGCCTTAAATAtctc                                                              <  2:1506723/96‑1 (MQ=255)
                                          gcggcgAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAACCTCTcc                                                           <  2:1426972/99‑1 (MQ=255)
                                            ggcgAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGAc                                                        >  1:3568854/1‑100 (MQ=255)
                                            ggcgAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGAc                                                        >  1:180813/1‑100 (MQ=255)
                                                aaaCACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGAcgcg                                                     <  1:678429/99‑1 (MQ=255)
                                                 aaCACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGACgcgc                                                    >  2:1620052/1‑99 (MQ=255)
                                                  acacGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGACGCGCtt                                                  <  2:4067562/100‑1 (MQ=255)
                                                   cacGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGACGCGCTTa                                                 >  2:2238901/1‑100 (MQ=255)
                                                   cacGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGACGCGCTTa                                                 >  1:3624714/1‑100 (MQ=255)
                                                   cacGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGACGCGCTTa                                                 >  1:2095358/1‑100 (MQ=255)
                                                   cacGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGAGTTTTGGCGTTAAAAAACTCTCCGACGCGCTTa                                                 >  1:2033391/1‑100 (MQ=255)
                                                    acGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGACGCGCTTAg                                                >  1:3505285/1‑100 (MQ=255)
                                                    acGGTTTTCGCCGGGCGATTGTTCCGGCGGCAAAAAAAAAGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGACGCGCTTAg                                                <  2:798747/100‑1 (MQ=255)
                                                      ggTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGACGCGCTTAGCg                                              >  2:2116952/1‑100 (MQ=255)
                                                        ttttCGCCGGGCGATTGTTCCGGTGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGACGCGCTTAGCgtg                                            >  2:746839/1‑100 (MQ=255)
                                                        ttttCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGACGCGCTTAGCgtg                                            <  1:2669665/100‑1 (MQ=255)
                                                        ttttCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGACGCGCTTAGCg                                              <  2:158186/98‑1 (MQ=255)
                                                           tCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGACGCGCTTAGCGTGTTc                                         >  2:1235384/1‑100 (MQ=255)
                                                           tCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGACGCGCTTAGCGTGTTc                                         <  1:1050601/100‑1 (MQ=255)
                                                            cGCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGACGCGCTTAGCGTGTTcg                                        <  2:1137715/100‑1 (MQ=255)
                                                             gCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGACGCGCTTAGCGTGTTcta                                       >  1:2131265/1‑98 (MQ=255)
                                                             gCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGACGCGCTTAGCGTGTTcga                                       >  1:3829346/1‑100 (MQ=255)
                                                              ccGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGcgccggaacaatcgcccggcgaaaaccgtgtttcgccgcttcagagattcgttcctgaccgc                                      <  1:1627119‑M2/100‑63 (MQ=255)
                                                              ccGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGACGCGCTTAGCGTGTTcgac                                      <  2:2320874/100‑1 (MQ=255)
                                                                 ggCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGACGCGCTTAGCGTGTTCgacgac                                   >  1:2559602/1‑100 (MQ=255)
                                                                  gCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGACGCGCTTAGCGTGTTCGACGACt                                  <  1:1168188/100‑1 (MQ=255)
                                                                  gCGATTGTTCCGGCGGCTAAAAAAACAAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGACGCGCTTAGCGTGTTcgacg                                     <  2:2047176/97‑1 (MQ=255)
                                                                    gATTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGACGCGCTTAGCGTGTTCGACGACTta                                <  2:3382493/100‑1 (MQ=255)
                                                                     aTTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGACGCGCTTAGCGTGTTCGACGACTtat                               >  2:1776587/1‑100 (MQ=255)
                                                                      ttGTTCCGGCGGCTAACGTGCCGAAAAAAGcgccggccccatcgcccggcgaaaaccgtgtttcgccgcttcagagattcgttcctgaccgctgcgcccc                              <  2:1003938‑M2/100‑71 (MQ=255)
                                                                       tGTTCCGGCGGCTAAAGTGAAGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGACGCGCTTAGCGTGTTCGACGACTTATaa                             <  2:2789987/100‑1 (MQ=255)
                                                                         ttCCGGCGGCTAACGTGCCGAAAAAAGcgccggaacaatcgcccggcgaaaaccgtgtttcgccgcttcagagattcgttcctgaccgctgggcaccggg                           <  1:2191724‑M2/100‑74 (MQ=255)
                                                                         ttCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGACGCGCTTAGCGTGTTCGACGACTTATAATg                           >  1:3236200/1‑100 (MQ=255)
                                                                         ttCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGACGCGCTTAGCGTGCTCGACGACTTATAAt                            <  1:3523569/99‑1 (MQ=255)
                                                                          tCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGACGCGCTTAGCGTGTTCGACGACTTATAATga                          <  2:1075378/100‑1 (MQ=255)
                                                                           ccGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGACGCGCTTAGCGTGTTCGACGACTTATAATgag                         <  2:1935727/100‑1 (MQ=255)
                                                                           ccGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGACGCGCTTAGCGTGTTCGACGACTTATAATgag                         <  1:1359597/100‑1 (MQ=255)
                                                                            cggcggCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGACGCGCTTAGCGTGTTCGACGACTTATAATgag                         <  1:3614119/99‑1 (MQ=255)
                                                                             ggcggcTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGACGCGCTTAGCGTGTTCGACGACTTATAATGAGat                       >  1:3996612/1‑100 (MQ=255)
                                                                              gcggaaaaCGTGAAGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGACGCGCTTAGCGTGTTCGACGACTTATAATGAGata                      <  2:4093619/94‑1 (MQ=255)
                                                                               cggcTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGACGCGCTTAGCGTGTTCGACGACTTATAATGAGatat                     >  1:3934985/1‑100 (MQ=255)
                                                                                gacTAACGCGCCGAAAAAAGCGCCCGAACGGATGCAGACTTTTGGCGTTAGAAGACTGTCCGACGCGCTTAGCGTGTTCGACGCCTTGTAATGAGat                       <  2:1600211/95‑1 (MQ=255)
                                                                                 gcTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGACGCGCTTAGCGTGTTCGACGACTTATAATGAGATATAc                   <  1:3350688/100‑1 (MQ=255)
                                                                                  cTAACGTGCCGAAAAAAGCGCCGGAGGGGATGCAGATTAAAAAAAAAAAAAAACTCTCCGACGCGCTTAGCGTGTTCGACGACTTATAATGAGATATAc                   <  2:3197110/99‑1 (MQ=255)
                                                                                  cTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGACGCGCTTAGCGTGTTCGACGACTTATAATGAGATATACg                  <  2:2559587/100‑1 (MQ=255)
                                                                                  cTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGACGCGCTTAGCGTGTTCGACGACTTATAATGAGATATACg                  >  1:1497234/1‑100 (MQ=255)
                                                                                       gTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGACGCGCTTAGCGTGTTCGACGACTTATAATGAGATATACggaggg             <  2:1555459/100‑1 (MQ=255)
                                                                                        tGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGACGCGCTTAGCGTGTTCGACGACTTATAATGAGATCTACggaggga            >  2:4004433/1‑100 (MQ=255)
                                                                                        tGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGACGCGCTTAGCGTGTTCGACGACTTATAATGAGATATACggaggga            <  1:1671830/100‑1 (MQ=255)
                                                                                         gCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGACGCGCTTAGCGTGTTCGACGACTTATAATGAGATATACggagggag           >  1:366276/1‑100 (MQ=255)
                                                                                          ccGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGACGCGCTTATCGTGTTCGACGACTTATAATGAGATATACggaggga            >  2:3422082/1‑98 (MQ=255)
                                                                                          ccGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGACGCGCTTAGCGTGTTCGACGACTTATAATGAGATATACGGAGGgaga          <  1:2840181/100‑1 (MQ=255)
                                                                                           cGAAAAAAGCGCCGGAAGGGGTGCAGATTTTTGGCGTTAAAAAACTCTCCGACGCGCTTAGCGTGTTCGACGACTTATAATGAGATATACGGAGGGAGat         <  1:1013425/100‑1 (MQ=255)
                                                                                            gAAAAAAGCGCCGGAAGTGATGCAGATTTTTGGCGTTAAAAAACTCTCCGACGCGCTTAGCGTGTTCGACGACTTATAATGAGATATACGGAGGGAGata        <  2:2669836/100‑1 (MQ=255)
                                                                                            gAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGACGCGCTTAGCGTGTTCGACGACTTATAATGAGATATACGGAGGGAGata        <  1:4107160/100‑1 (MQ=255)
                                                                                            gAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGACGCGCTTAGCGTGTTCGACGACTTATAATGAGATATACGGAGGGAGata        <  2:757831/100‑1 (MQ=255)
                                                                                              aaaaaGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGACGCGCTTAGCGTGTTCGACGACTTATAATGAGATATACGGAGGGAGATATg      >  1:2749642/1‑100 (MQ=255)
                                                                                                aaaGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGACGCGCTTAGCGTGTTCGACGACTTATAATGAGATATACGGAGGGAGATATgtc    <  2:3226172/100‑1 (MQ=255)
                                                                                                 aaGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGACGCGCTTAGGGAGTTCGACGACTTATAATGAGATATACGGAGGGAGATATgtcg   >  1:1146502/1‑100 (MQ=255)
                                                                                                  aGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGACGCGCTTAGCGTGTTCGACGACTTATAATGAGATATACGGAGGGAGATATgtcgt  <  1:1914796/100‑1 (MQ=255)
                                                                                                   |                                                                                                  
GAGATCCGCCCGGTGCCCAGCGGTCAGGAACGAATCTCTGAAGCGGCGAAACACGGTTTTCGCCGGGCGATTGTTCCGGCGGCTAACGTGCCGAAAAAAGCGCCGGAAGGGATGCAGATTTTTGGCGTTAAAAAACTCTCCGACGCGCTTAGCGTGTTCGACGACTTATAATGAGATATACGGAGGGAGATATGTCGT  >  NC_000913/4627124‑4627321

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.