New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 4636368140 (0.950)5 (0.040) 4/166 NT 3.5% coding (362/690 nt) creB response regulator in two‑component regulatory system with CreC
?NC_000913 = 4636382 148 (1.080)coding (376/690 nt) creB response regulator in two‑component regulatory system with CreC
Rejected: Frequency below cutoff threshold.

Only 100 of 184 total aligned reads displayed.

GGCTGGAAATTGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTTGAATTGAATGAACCCGCGGCGCAGATCAGCTGGTTTGACACGCCATTAGCGCTGACTCGGTATG  >  NC_000913/4636284‑4636481
                                                                                                  |                                                                                                   
ggCTGGAAATTGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTc                                                                                                    <  1:1805335‑M2/100‑2 (MQ=255)
 gCTGGAAATTGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTcg                                                                                                   <  1:991783‑M2/100‑3 (MQ=255)
 gCTGGAAATTGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTc                                                                                                    <  1:4119746‑M2/99‑2 (MQ=255)
  ccggaaATTGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTcga                                                                                                  <  1:2802216‑M2/98‑4 (MQ=255)
  cTGGGAATTGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGGGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTc                                                                                                    >  2:2303741‑M2/1‑97 (MQ=255)
  cTGGAAATTGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTcga                                                                                                  <  2:3602844‑M2/100‑4 (MQ=255)
  cTGGAAATTGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTcga                                                                                                  <  1:1272767‑M2/100‑4 (MQ=255)
   tGGAAATTGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTcgac                                                                                                 <  2:2567842‑M2/100‑5 (MQ=255)
    ggAAATTGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTcgacg                                                                                                <  1:2617948‑M2/100‑6 (MQ=255)
      aaaTTGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGcc                                                                                              >  1:1019455/1‑100 (MQ=255)
          tGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGtct                                                                                          >  2:2624725/1‑100 (MQ=255)
            gTGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTcc                                                                                        <  2:1512841/100‑1 (MQ=255)
                tGACGACTACGTCGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTc                                                                                    <  1:395502/100‑1 (MQ=255)
                 gacgacTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCa                                                                                   >  1:1683563/1‑100 (MQ=255)
                 gacgacTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCa                                                                                   >  2:1712278/1‑100 (MQ=255)
                   cgacTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATc                                                                                 >  1:3478576/1‑100 (MQ=255)
                   cgacTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATc                                                                                 <  1:2373236/100‑1 (MQ=255)
                    gacTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATcc                                                                                <  1:3062278/100‑1 (MQ=255)
                    aacTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATcc                                                                                <  1:2194784/99‑1 (MQ=255)
                     acTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCg                                                                               >  2:3795300/1‑100 (MQ=255)
                      cTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGt                                                                              >  1:3624493/1‑100 (MQ=255)
                        aCGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTAt                                                                            <  1:4131288/100‑1 (MQ=255)
                        aCGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTAt                                                                            <  1:823994/100‑1 (MQ=255)
                        aCGTGGCTAAACCGTCTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTAt                                                                            <  1:4078515/100‑1 (MQ=255)
                         cGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTAtt                                                                           >  1:827480/1‑100 (MQ=255)
                           tGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTgg                                                                         <  2:1263631/100‑1 (MQ=255)
                           tGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTgg                                                                         >  1:51598/1‑100 (MQ=255)
                           tGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTgg                                                                         <  1:1932296/100‑1 (MQ=255)
                            ggCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGa                                                                        <  2:2790498/100‑1 (MQ=255)
                              cTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACa                                                                      >  1:2568377/1‑100 (MQ=255)
                              cTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACa                                                                      >  1:345915/1‑100 (MQ=255)
                              cTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCCACGCCGTCTCCCGTCATCCGTATTGGACa                                                                      >  2:1966350/1‑100 (MQ=255)
                               tAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACAt                                                                     >  1:2426708/1‑100 (MQ=255)
                                aaaCCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACAtt                                                                    >  2:928840/1‑100 (MQ=255)
                                aaaCCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACAtt                                                                    >  1:483759/1‑100 (MQ=255)
                                  aCCATTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACAtttt                                                                  >  1:2340088/1‑100 (MQ=255)
                                    cGTTTTCACCCCGCGAATTGTGCGCCAGGGTGCGCACCTTAATGCGTCGGGCGAAGAAGTACTCGACGCCGTATCCCGTCATCCGTATTGGACAtttt                                                                  >  2:1670824/1‑98 (MQ=255)
                                    cGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTttga                                                                >  1:90878/1‑100 (MQ=255)
                                    cGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCGCCCGTCATCCGTATTGGACATTttga                                                                <  2:715080/100‑1 (MQ=255)
                                     gTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTttgaa                                                               >  1:3256917/1‑100 (MQ=255)
                                      ttttCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTttgaat                                                              <  2:778293/100‑1 (MQ=255)
                                      ttttCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTttgaat                                                              >  1:617351/1‑100 (MQ=255)
                                        ttCACCCCGCTAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTttgaattg                                                            <  1:3725701/100‑1 (MQ=255)
                                        ttCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTttgaattg                                                            <  2:3300011/100‑1 (MQ=255)
                                         tCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTttgaattga                                                           >  1:3560490/1‑100 (MQ=255)
                                           aCCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTtgaattgaat                                                         <  1:1329690/100‑1 (MQ=255)
                                           aCCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTtgaattgaat                                                         >  1:1305068/1‑100 (MQ=255)
                                           aCCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTtgaattgaat                                                         <  2:3514717/100‑1 (MQ=255)
                                           aCCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTtgaattgaat                                                         <  1:300915/100‑1 (MQ=255)
                                           aCCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTtgaattgaat                                                         <  1:1595664/100‑1 (MQ=255)
                                            ccccGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACAttttagatcggaag                                                        >  2:281612/1‑90 (MQ=255)
                                            ccccGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTTGAATtgaatg                                                        >  1:2667301/1‑100 (MQ=255)
                                             cccGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTTGAATtgaatga                                                       >  1:100191/1‑100 (MQ=255)
                                              ccGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTTGAATtgaatgaa                                                      >  2:1430197/1‑100 (MQ=255)
                                               cgcgAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGCCGCCGTCTCCCGTCATCCGTATTGGACATTTTGAATTGAATGAAc                                                     >  2:2219690/1‑100 (MQ=255)
                                               cgcgAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTTGAATTGAATGAAc                                                     <  2:114392/100‑1 (MQ=255)
                                                     gtgtGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTTGAATTGAATGAACCCgcgg                                               >  1:845065/1‑100 (MQ=255)
                                                       gtgCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTTGAATTGAATGAACCCgcggcg                                             <  1:2577229/100‑1 (MQ=255)
                                                       gtgCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTTGAATTGAATGAACCCgcggcg                                             >  2:635619/1‑100 (MQ=255)
                                                       gtgCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTTGAATTGAATGAACCCgcggcg                                             >  1:1728003/1‑100 (MQ=255)
                                                         gcgcCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTTGAATTGAATGAACCCGCGGCGCa                                           >  2:1904699/1‑100 (MQ=255)
                                                         gcgcCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTTGAATTGAATGAACCCGCGGCGCa                                           <  2:537923/100‑1 (MQ=255)
                                                            ccAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTTGAATTGAATGAACCCGCGGCGCAGAt                                        >  1:747655/1‑100 (MQ=255)
                                                             cAGGGTGCGCACCTTACTGCGTCGGGTTAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTTGAATTGAATGAACCCGCGGCGCAGATc                                       <  2:925233/100‑1 (MQ=255)
                                                             cAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTTGAATTGAATGAACCCGCGGCGCAGATc                                       <  1:1430207/100‑1 (MQ=255)
                                                             cAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTTGAATTGAATGAACCCGCGGCGCAGATc                                       <  1:3432018/100‑1 (MQ=255)
                                                              ggggTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTTGAATTGAATGAACCCGCGGCGCAGATCa                                      <  1:2023496/99‑1 (MQ=255)
                                                              aGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTTGAATTGAATGAACCCGCGGCGCAGGTCa                                      >  2:2543988/1‑100 (MQ=255)
                                                                 gggcgcgtcTTAGTGCGTCGGGTGAAGACGTGACCGACGCCGGCTCACGTCAGGCGTATTGGACATTTTGAATTGAATGAACCCGCGGCGCAGAt                                        <  2:1662342/87‑1 (MQ=255)
                                                                 gTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTTGAATTGAATGAACCCGCGGCGCAGATCAGCt                                   <  2:2259667/100‑1 (MQ=255)
                                                                  tGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTTGAATTGAATGAACCCGCGGCGCAGATCAGCTg                                  <  1:2357739/100‑1 (MQ=255)
                                                                    cgcACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTTGAATTGAATGAACCCGCGGCGCAGATCAGCTGGt                                <  1:213427/100‑1 (MQ=255)
                                                                    cgcACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTTGAATTGAATGAACCCGCGGCGCAGATCAGCTGGt                                >  2:1077045/1‑100 (MQ=255)
                                                                       aCCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTTGAATTGAATGAACCCGCGGCGCAGATCAGCTGGTTTg                             <  1:3704056/100‑1 (MQ=255)
                                                                       aCCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCATCTCCCGTCATCCGTATTGGACATTTTGAATTGAATGAACCCGCGGCGCAGATCAGCTGGTTTg                             <  2:3971843/100‑1 (MQ=255)
                                                                        ccTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACAGTTTGAATTGAATGAACCCGCGGCGCAGATCAGCTGGTTTg                             <  2:2890953/99‑1 (MQ=255)
                                                                         cTTACTGCGTCGGGTGAAGAAGTTCTcgacgcagtaaggtgcgcaccctggcgcacacttcgcggggtgaaaacggtttagccacgtagtcgtcagcacc                           <  1:1149420‑M2/100‑75 (MQ=255)
                                                                         cTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTTGAATTGAATGAACCCGCGGCGCAGATCAGCTGGTTTGac                           >  2:3926276/1‑100 (MQ=255)
                                                                            aCTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTTGAATTGAATGGACCCGCGGCGCAGATCAGCTGGTTTGaca                          <  1:3332913/98‑1 (MQ=255)
                                                                            aCTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTACTGGACATTTTGAATTGAATGAACCCGCGGCGCAGATCAGCTGGTTTCacac                         >  2:3341306/1‑99 (MQ=255)
                                                                             cTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTTGAATTGAATGAACCCGCGGCGCAGATCAGCTGGTTTGACACGc                       >  2:3222668/1‑100 (MQ=255)
                                                                             cTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTTGAATTGAATGAACCCGCGGCGCAGATCAGCTGGTTTGACACGc                       >  2:3710698/1‑100 (MQ=255)
                                                                              tGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTTGAATTGAATGAACCCGCGGCGCAGATCAGCTGGTTTGACACGcc                      <  2:3029512/100‑1 (MQ=255)
                                                                              tGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTTGAATTGAATGAACCCGCGGCGCAGATCAGCTGGTTTGACACGcc                      >  2:3641169/1‑100 (MQ=255)
                                                                               gCGTCGGGTGAAGAAGTTCTcgacgcagtaaggtgcgcaccctggcgcacacttcgcggggtgaaaacggtttagccacgtagtcgtcagcaccaatttc                     <  2:4028740‑M2/100‑81 (MQ=255)
                                                                                cGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTTGAATTGAATGAACCCGCGGCGCAGATCAGCTGGTTTGACACGCCAt                    >  2:3199590/1‑100 (MQ=255)
                                                                                 gTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTTGAATTGAATGAACCCGCGGCGCAGATCAGCTGGTTTGACACGCCAtt                   <  1:176213/100‑1 (MQ=255)
                                                                                 gTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTTGAATTGAATGAACCCGCGGCGCAGATCAGCTGGTTTGACACGCCAtt                   <  1:1189660/100‑1 (MQ=255)
                                                                                   cGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTTGAATTGAATGAACCCGCGGCGCAGATCAGCTGGTTTGACACGCCATTAg                 >  1:740202/1‑100 (MQ=255)
                                                                                     ggTGAAGAAGTTCTCGACGCCGTCTCCCGTCATGCGTATTGGACATTTTGAATTGAATGAACCCGCGGCGCAGATCAGCTGGTTTGACACGCCATTAgc                >  2:2730003/1‑99 (MQ=255)
                                                                                      gTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTTGAATTGAATGAACCCGCGGCGCAGATCAGCTGGTTTGACACGCCATTAgcgc              >  2:44557/1‑100 (MQ=255)
                                                                                      gTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTTGAATTGAATGAACCCGCGGCGCAGATCAGCTGGTTTGACACGCCATTAgcgc              <  1:266024/100‑1 (MQ=255)
                                                                                      gTGAAGAAGTTCTCGACGCCGTCTCCCGTCACCCGTATTGGACATTTTGAATTGAATGAACCCGCGGCGCAGATCAGCTGGTTTGACACGCCATTAgcgc              <  1:3846525/100‑1 (MQ=255)
                                                                                            aagTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTTGAATTGAATGAACCCGCGGCGCAGATCAGCTGGTTTGACACGCCATTAGCGCTGACTc        >  2:1073134/1‑100 (MQ=255)
                                                                                             agTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTTGAATTGAATGAACCCGCTGCGCAGATCAGCTGGTTTGACACGCCATTAGCGCTGAcac        >  2:1031258/1‑97 (MQ=255)
                                                                                               ttCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTTGAATTGAATGAACCCGCGGCGCAGATCAGCTGGTTTGACACGCCATTAGCGCTGACTCgg      >  2:3295033/1‑99 (MQ=255)
                                                                                               ttCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTTGAATTGAATGAACCCGCGGCGCAGATCAGCTGGTTTGACACGCCATTAGCGCTGACTCGGt     <  2:2261817/100‑1 (MQ=255)
                                                                                               ttCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTTGAATTGAATGAACCCGCGGCGCAGATCAGCTGGTTTGACACGCCATTAGCGCTGACTCGGt     <  1:2773500/100‑1 (MQ=255)
                                                                                                tctcGACGCCGTCTCCCGTCATCCGTATTGGACATTTTGAATTGAATGAACCCGCGGCGCAGATCAGCTGGTTTGACACGCCATTAGCGCTGACTCGGTa    >  2:354150/1‑100 (MQ=255)
                                                                                                  tcGACGCCGTCTCCCGTCATCCGTATTGGACATTTTGAATTGAATGAACCCGCGGCGCAGATCAGCTGGTTTGACACGCCATTAGCGCTGACTCGGTATg  <  1:136374/100‑1 (MQ=255)
                                                                                                  |                                                                                                   
GGCTGGAAATTGGTGCTGACGACTACGTGGCTAAACCGTTTTCACCCCGCGAAGTGTGCGCCAGGGTGCGCACCTTACTGCGTCGGGTGAAGAAGTTCTCGACGCCGTCTCCCGTCATCCGTATTGGACATTTTGAATTGAATGAACCCGCGGCGCAGATCAGCTGGTTTGACACGCCATTAGCGCTGACTCGGTATG  >  NC_000913/4636284‑4636481

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.