New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 1396316 =NA (NA)23 (0.170) 12/164 NT 17.0% noncoding (273/1195 nt) IS5 repeat region
?NC_000913 = 1428549 122 (0.830)noncoding (246/1196 nt) IS5 repeat region

Only 100 of 270 total aligned reads displayed.

TCGGGCAAACAGGCGCATGGAGGCGATTTCGTACAGGGCATCTTCCATGGCACCGTCGCTCAGGTTGTACCAATGCTGCATGCAGTGAATACGCAGCATGGTCTCCAGCGGATAGGGCCGTCGGCCATTGCCCGCCTTGGGATAAAACGGCTCGATGACAGCGGTCATATTCTGCCATGGCAGAATCTGCTCCATGCG  >  NC_000913/1428451‑1428648
                                                                                                  |                                                                                                   
tCGGGCAAACAGGCGCATGGAGGCGATTTCGTACAGGGCATCTTCCATGGCACCGTCGCTCAGGTTGTACCAATGCTGCCTGCAGTGAATACGCAGCATg                                                                                                    <  2:3926788/100‑1 (MQ=255)
 cGGGCAAACAGGCGCATGGAGGCGATTTCGTACAGGGCATCTTCCATGGCACCGTCGCTCAGGTTGTACCAATGCTGCATGCAGTGAATACGCAGCATgg                                                                                                   <  2:2278513/100‑1 (MQ=255)
  gggCAAACAGGCGCATGGAGGCGATTTCGTACAGGGCATCTTCCATGGCACCGTCGCTCAGGTTGTACCAATGCTGCATGCAGTGAATACGCAGCATGGt                                                                                                  >  1:2058046/1‑100 (MQ=255)
      aaaCAGGCGCATGGAGGCGATTTCGTACAGGGCATCTTCCATGGCACCGTCGCTCAGGTTGTACCAATGCTGCATGCAGTGAATACGCAGCATGGTCTcc                                                                                              <  1:101038/100‑1 (MQ=255)
        acacGCGCATGGAGCCCAGCGCGTCCAGGGCATCTTCCATGGCACCGTCGCTCAGGTTGTACCAATGCTGCATGCAGCGAATACGCAGCATGGTCTCCa                                                                                             <  2:794160/99‑1 (MQ=18)
         cAGGCGCATGGAGGCGATTTCGTACAGGGCATCTTCCATGGCACCGTCGCTCAGGTTGTACCAATGCTGCATGCAGTGAATACGCAGCATGGTCTCCAGc                                                                                           <  2:1512174/100‑1 (MQ=255)
          aGGCGCATGGAGGCGATTTCGTACAGGGCATCTTCCATGGCACCGTCGCTCAGGCTGTACCAATGCTGCATGCAGTGAATACGCAGCATGGTCTCCAGCg                                                                                          <  1:3106657/100‑1 (MQ=255)
           ggCGGATGGAGGCGATTTCGTACAGGGCATCTTCCATGGCACCGTCGCTCAGGTTGGACCAATGCTGCATGCAGTGAATACGCAGCATGGTCTCCAGCgg                                                                                         <  2:1457962/100‑1 (MQ=255)
           ggCGCATGGAGGCGATTTCGTACAGGGCATCTTCCATGGCACCGTCGCTCAGGTTGTACCAATGCTGCATGCAGTGAATACGCAGCATGGTCTCCAGCgg                                                                                         >  2:3828278/1‑100 (MQ=255)
              gcATGGAGGCGATTTCGTACAGGGCATCTTCCATGGCACCGTCGCTCAGGTTGTACCAATGCTGCATGCAGTGAATACGCAGCATGGTCTCCAGCGGATa                                                                                      <  1:3041868/100‑1 (MQ=255)
               cATGGAGGCGATTTCGTACAGGGCATCTTCCATGGCACCGTCGCTCAGGTTGTACCAATGCTGCATGCAGTGAATACGCAGCATGGTCTCCAGCGGATAg                                                                                     >  1:908978/1‑100 (MQ=255)
                 tGGAGGCGATTTCGTACAGGGCATCTTCCATGGCACCGTCGCTCAGGTTGTACCAATGCTGCATGCAGTGAATACGCAGCATGGTCTCCAGCGGATAggg                                                                                   >  1:2374788/1‑100 (MQ=255)
                  ggAGGCGATTTCGTACAGGGCATCTTCCATGGCACCGTCGCTCAGGTTGTACCAATGCTGCATGCAGTGAATACGCAGCATGGTCTCCAGCGGATAGGGc                                                                                  <  1:1078689/100‑1 (MQ=255)
                  ggAGGCGATTTCGTACAGGGCATCTTCCATGGCACCGTCGCTCAGGTTGTACCAATGCTGCATGCAGTGAATACGCAGCATGGTCTCCAGCGGATAGGGc                                                                                  <  1:4114310/100‑1 (MQ=255)
                   gAGGCGATTTCGTACAGGGCATCTTCCATGGCACCGTCGCTCAGGTTGTACCAATGCTGCATGCAGTGAATACGCAGCATGGTCTCCAGCGGATAGGGcc                                                                                 >  1:2661860/1‑100 (MQ=255)
                      gCGATTTCGTACAGGGCATCTTCCATGGCACCGTCGCTCAGGTTGTACCAATGCTGCATGCAGTGAATACGCAGCATGGTCTCCAGCGGATAGGgtcgtc                                                                              >  2:3410114/1‑100 (MQ=255)
                       cGATTTCGTACAGGGCATCTTCCATGGCACCGTCGCTCAGGTTGTACCAATGCTGCATGCAGTGAATACGCAGCATGGTCTCCAGCGGATAGGGCCGTCg                                                                             >  2:282497/1‑100 (MQ=255)
                           ttCGTACAGGGCATCTTCCATGGCACCGTCGCTCAGGTTGTACCAATGCTGCATGCAGTGAATACGCAGCATGGTCTCCAGCGGATAGGGCCGTCGGCCa                                                                         <  1:1220034/100‑1 (MQ=255)
                             cGTACAGGGCATCTTCCATGGCACCGTCGCTCAGGTTGTACCAATGCTGCATGCAGTGAATACGCAGCATGGTCTCCAGCGGATAGGGCCGTCGGCCAtt                                                                       <  1:505538/100‑1 (MQ=255)
                             cGTACAGGGCATCTTCCATGGCACCGTCGCTCAGGTTGTACCAATGCTGCATGCAGTGAATACGCAGCATGGTCTCCAGCGGATAGGGCCGTCGGCCAtt                                                                       >  1:216273/1‑100 (MQ=255)
                              gTACAGGGCATCTTCCATGGCACCGTCGCTCAGGTTGTACCAATGCTGCATGCAGTGAATACGCAGCATGGTCTCCAGCGGATAGGGCCGTCGGCCATTg                                                                      <  1:3634672/100‑1 (MQ=255)
                              gTACAGGGCATCTTCCATGGCACCGTCGCTCAGGTTGTACCAATGCTGCATGCAGTGAATACGCAGCATGGTCTCCAGCGGATAGGGCCGTCGGCCATTg                                                                      <  2:3206745/100‑1 (MQ=255)
                                 cAGGGCATCTTCCATGGCACCGTCGCTCAGGTTGTACCAATGCTGCATGCAGTGAATACGCAGCATGGTCTCCAGCGGATAGGGCCGTCGGCCATTGccc                                                                   >  1:2877357/1‑100 (MQ=255)
                                  aGGGCATCTTCCATGGCACCGTCGCTCAGGTTGTACCAATGCTGCATGCAGTGAATACGCAGCATGGTCTCCAGCGGATAGGGCCGTCGGCCATTGCCCg                                                                  <  2:3628834/100‑1 (MQ=255)
                                   gggCATCTTCCATGGCACCGTCGCTCAGGTTGTACCAATGCTGCATGCAGTGAATACGCAGCATGGTCTCCAGCGGATAGGGCCGTCGGCCATTGCCCGc                                                                 >  1:2333375/1‑100 (MQ=255)
                                   gggCATCTTCCATGGCACCGTCGCTCAGGTTGTACCAATGCTGCATGCAGTGAATACGCAGCATGGTCTCCAGCGGATAGGGCCGTCGGCCATTGCCCGc                                                                 <  1:3562270/100‑1 (MQ=255)
                                    ggCATCTTCCATGGCACCGTCGCTCAGGTTGTACCAATGCTGCATGCAGTGAATACGCAGCATGGTCTCCAGCGGATAGGGCCGTCGGCCATTGCCCGcc                                                                <  2:1127573/100‑1 (MQ=255)
                                     gCATCTTCCATGGCACCGTCGCTCAGGTTGTACCAATGCTGCATGCAGTGAATACGCAGCATGGTCTCCAGCGGATAGGGCCGTCGGCCATTGCCCGCCt                                                               >  2:18436/1‑100 (MQ=255)
                                         cTTCCATGGCACCGTCGCTCAGGTTGTACCAATGCTGCATGCAGTGAATACGCAGCATGGTCTCCAGCGGATAGGGCCGTCGGCCATTGCCCGCCTTggg                                                           <  1:3451046/100‑1 (MQ=255)
                                         cTTCCATGGCACCGTCGCTCAGGTTGTACCAATGCTGCATGCAGTGAATACGCAGCATGGTCTCCAGCGGATAGGGCCGTCGGCCATTGCCCGCCTTggg                                                           >  2:2660216/1‑100 (MQ=255)
                                           tCCATGGCACCGTCGCTCAGGTTGTACCAATGCTGCATGCAGTGAATACGCAGCATGGTCTCCAGCGGATAGGGCCGTCGGCCATTGCCCGCCTTGGGAt                                                         >  1:1420645/1‑100 (MQ=255)
                                            ccATGGCACCGTCGCTCAGGTTGTACCAATGCTGCATGCAGTGAATACGCAGCATGGTCTCCAGCGGATAGGGCCGTCGGCCATTGCCCGCCTTGGGATa                                                        <  1:3253277/100‑1 (MQ=255)
                                                ggCACCGTCGCTCAGGTTGTACCAATGCTGCATGCAGTGAATACGCAGCATGGTCTCCAGCGGATAGGGCCGTCGGCCATTGCCCGCCTTGGGATAAAAc                                                    <  1:263279/100‑1 (MQ=255)
                                                 gCACCGTCGCTCAGGTTGTACCAATGCTGCATGCAGTGAATACGCAGCATGGTCTCCAGCGGATAGGGCCGTCGGCCATTGCCCGCCTTGGGATAAAAcn                                                   <  2:4063449/100‑2 (MQ=255)
                                                 gCACCGTCGCTCAGGTTGTACCAATGCTGCATGCAGTGAATACGCAGCATGGTCTCCAGCGGATAGGGCCGTCGGCCATTGCCCGCCTTGGGATAAAACg                                                   <  2:3677745/100‑1 (MQ=255)
                                                           tCAGGTTGTACCAATGCTGCATGCAGTGAATACGCAGCATGGTCTCCAGCGGATAGGGCCGTCGGCCATTGCCCGCCTTGGGATAAAACGGCTCGATGAc                                         >  1:3704274/1‑100 (MQ=255)
                                                              ggTTGTACCAATGCTGCATGCAGTGAATACGCAGCATGGTCTCCAGCGGATAGGGCCGTCGGCCATTGCCCGCCTTGGGATAAAACGGCTCGATGACAGc                                      >  2:3589115/1‑100 (MQ=255)
                                                                ttGTACCAATGCTGCATGCAGTGAATACGCAGCATGGTCTCCAGCGGATAGGGCCGTCGGCCATTGCCCGCCTTGGGATAAAACGGCTCGATGACAGCgg                                    <  1:3203993/100‑1 (MQ=255)
                                                                ttGTACCAATGCTGCATGCAGTGAATACGCAGCATGGTCTCCAGCGGATAGGGCCGTCGGCCATTGCCCGCCTTGGGATAAAACGGCTCGATGACAGCgg                                    <  2:1778215/100‑1 (MQ=255)
                                                                    aCCAATGCTGCATGCAGTGAATGCGTAGCATtggtacaacctgagcgatggcgcgatggaagatgctctgtacgaaatcgcctccatgcgtctgtttgcc                                <  2:2446015‑M2/100‑70 (MQ=255)
                                                                    aCCAATGCTGCATGCAGTGAATGCGTAGCATtggcacaacctgagcgatggcgcgatggaagatgctctgtacgaaatcgcctccatgcgtctgtttccc                                <  2:1635859‑M2/100‑70 (MQ=255)
                                                                    aCCAATGCTGCATGCAGTGAATACGCAGCATGGTCTCCAGCGGATAGGGCCGTCGGCCATTGCCCGCCTTGGGATAAAACGGCTCGATGACAGCGGTCa                                 <  2:1206829/99‑1 (MQ=255)
                                                                     ccAATGCTGCATGCAGTGAATACGCAGCATtggtacaacctgagcgacggtgccatggaagatgccctgtacgaaatcgcctccatgcgcctgtttgccc                               <  1:797694‑M2/100‑71 (MQ=255)
                                                                     ccAATGCTGCATGCAGTGAATACGCAGCATtggtacaacctgagcgacggtgccatggaagatgccctgtacgaaatcgcctccatgcgcctgtttgccc                               <  1:2568216‑M2/100‑71 (MQ=255)
                                                                     ccAATGCTGCATGCAGTGAATACGCAGCATGGTCTCCAGCGGATAGGGCCGTCGGCCATTGCCCGCCTTGGGATAAAACGGCTCGATGACAGCGGTCata                               <  2:2374774/100‑1 (MQ=255)
                                                                        aTGCTGCATGCAGTGAAT‑‑GCAGCATtggtacaacctgagcgatggcgcgatggaagatgctctgtacgaaatcgcctccatgcgtctgtttgcccggtt                           <  2:627604‑M2/99‑75 (MQ=255)
                                                                           ctgcATGCAGTGAATACGCAGCATGGTCTCCAGCGGATAGGGCCGTCGGCCATTGCCCGCCTTGGGATAAAACGGCTCGATGACAGCGGTCATATTCTGc                         >  1:3535156/1‑100 (MQ=255)
                                                                               atgcaGTGAATACGCAGCATGGTCTCCAGCGGATAGGGCCGTCGGCCATTGCCCGCCTTGGGATAAAACGGCTCGATGACAGCGGTCATATTCTGCCATg                     <  2:2926820/100‑1 (MQ=255)
                                                                                 gcaGTGAATACGCAGCATGGTCTCCAGCGGATAGGGCCGTCGGCCATTGCCCGCCTTGGGATAAAACGGCTCGATGACAGCGGTCATATTCTGCCATGGc                   <  2:2075774/100‑1 (MQ=255)
                                                                                    gTGAATACGCAGCATGGTCTCCAGCGGATAGGGCCGTCGGCCATTGCCCGCCTTGGGATAAAACGGCTCGATGACAGCGGTCATATTCTGCCATGGCAGa                >  1:838768/1‑100 (MQ=255)
                                                                                    gTGAATACGCAGCATGGTCTCCAGCGGATAGGGCCGTCGGCCATTGCCCGCCTTGGGATAAAACGGCTCGATGACAGCGGTCATATTCCGCCATGGCAGa                >  2:434548/1‑100 (MQ=255)
                                                                                       aaTACGCAGCATGGTCTCCAGCGGATAGGGCCGTCGGCCATTGCCCGCCTTGGGATAAAACGGCTCGATGACAGCGGTCATATTCTGCCATGGCAGAAta             <  2:2341547/100‑2 (MQ=255)
                                                                                        aTACGCAGCATGGTCTCCAGCGGATAGGGCCGTCGGCCATTGCCCGCCTTGGGATAAAACGGCTCGATGACAGCGGTCATATTCTGCCATGGCAGAATCt            >  1:380660/1‑100 (MQ=255)
                                                                                         tACGCAGCATGGTCTCCAGCGGATAGGGCCGTCGGCCATTGCCCGCCTTGGGATAAAACGGCTCGATGACAGCGGTCATATTCTGCCATGGCAGAATCTg           <  1:1707627/100‑1 (MQ=255)
                                                                                            gcagcaTtggtacaacctgagcgatggcgcgatggaagatgctctgtacgaaatcgcctccatgcgtctgtttgcccggttatccctggatagcgccttg        >  1:2254496‑M2/1‑7 (MQ=255)
                                                                                            gcagcaTtggtacaacctgagcgatggcgcgatggaagatgctctgtacgaaatcgcctccatgcgtctgtttgcccggttatccctggatagcgccttg        <  1:2963352‑M2/100‑94 (MQ=255)
                                                                                            gcagcaTtggtacaacctgagcgatggcgcgatggaagatgctctgtacgaaatcgcctccatgcgtctgtttgcccggttatccctagatagcgccttg        <  2:2263427‑M2/100‑94 (MQ=255)
                                                                                            gcagcaTtggtacaacctgagcgatggcgcgatggaagatgctctgtacgaaatcgcccccatgcgtctgtttgcccggttatccctggatagcgccttg        >  1:3851808‑M2/1‑7 (MQ=255)
                                                                                            gcagcaTGGTCTCCAGCGGATAGGGCCGTCGGCCATTGCCCGCCTTGGGATAAAACGGCTCGATGACAGCGGTCATATTCTGCCATGGCAGAATCTGCTc        >  2:4011818/1‑100 (MQ=255)
                                                                                             cagcaTtggtacaacctgagcgatggcgcgatggaagatgctctgtacgaaatcgcctccatgggtctgtttgcccggttatccctggatagcgccttgc       >  1:2918605‑M2/1‑6 (MQ=255)
                                                                                             cagcaTtggtacaacctgagcgatggcgcgatggaagatgctctgtacgaaatcgcctccatgcgtctgtttgcccggttatccctggatagcgccttgc       <  2:2967388‑M2/100‑95 (MQ=255)
                                                                                             cagcaTtggtacaacctgagcgatggcgcgatggaagatgctctgtacgaaatcgcctccatgcgtctgtttgcccggttatccctggatagcgccttgc       <  2:1687707‑M2/100‑95 (MQ=255)
                                                                                             cagcaTtggtacaacctgagcgatggcgcgatggaagatgctctgtacgaaatcgcctccatgcgtctgtttgcccggttatccctggatagcgccttgc       <  2:1299933‑M2/100‑95 (MQ=255)
                                                                                             cagcaTtggtacaacctgagcgatggcgcgatggaagatgctctgtacgaaatcgcctccatgcgtctgtttgcccggttatccctggatagcgccttgc       <  1:1953595‑M2/100‑95 (MQ=255)
                                                                                             cagcaTtggtacaacctgagcgatggcgcgatggaagatgctctgtacgaaatcgcctccatgcgtctgtttgcccggttatccctggatagcgccttgc       <  2:485261‑M2/100‑95 (MQ=255)
                                                                                             cagcaTtggtacaacctgagcgatggcgcgatggaagatgctctgtacgaaatcgcctccatgcgtctgtttgcccggttatccctggatagcgccttgc       <  2:3620412‑M2/100‑95 (MQ=255)
                                                                                              agcaTtggtacaacctgagcgatggcgcgatggaagatgctctgtacgaaatcgcctccatgcgtctgtttgcccggttatccctggatagcgccttgcc      >  1:2995558‑M2/1‑5 (MQ=255)
                                                                                              agcaTtggtacaacctgagcgatggcgcgatggaagatgctctgtacgaaatcgcctccatgcgtctgtttgcccggttatccctggatagcgccttgcc      >  1:2442‑M2/1‑5 (MQ=255)
                                                                                              agcaTtggtacaacctgagcgatggcgcgatggaagatgctctgtacgaaatcgcctccatgcgtctgtttgcccggttatccctggatagcgccttgcc      <  2:3595888‑M2/100‑96 (MQ=255)
                                                                                              agcaTtggtacaacctgagcgatggcgcgatggaagatgctctgtacgaaatcgcctccatgcgtctgtttgcccggttatccctggatagcgccttgcc      >  2:2744579‑M2/1‑5 (MQ=255)
                                                                                              agcaTtggtacaacctgagcgatggcgcgatggaagatgctctgtacgaaatcgcctccatgcgtctgtttgcccggttatccctggatagcgccttgcc      <  1:2409647‑M2/100‑96 (MQ=255)
                                                                                              agcaTtggtacaacctgagcgatggcgcgatggaagatgctctgtacgaaatcgcctccatgcgtctgtttgcccggttatccctggatagcgccttgcc      >  2:3256048‑M2/1‑5 (MQ=255)
                                                                                              agcaTtggtacaacctgagcgatggcgcgatggaagatgctctgtacgaaatcgcctccatgcgtctgtttgcccggttatccctggatagcgccttgcc      >  2:1590503‑M2/1‑5 (MQ=255)
                                                                                              agcaTtggtacaacctgagcgatggcgcgatggaagatgctctgtacgaaatcgcctccatgcgtctgtttgcccggttatccctggatagcgccttgcc      >  1:4022015‑M2/1‑5 (MQ=255)
                                                                                              agcaTGGTCTCCAGCGGATAGGGCCGTCGGCCATTGCCCGCCTTGGGATAAAACGGCTCGGTGCCAGCGGTCATATTCTGCCATGGCAGAATCTGCtac       >  2:2521580/1‑97 (MQ=255)
                                                                                               gcaTtggtacaacctgagcgatggcgctatggaagatgctctgtacgaaatcgcctccatgcgtctgtttgcccggttatccctggatagcgccttgccg     >  1:719495‑M2/1‑4 (MQ=255)
                                                                                               gcaTtggtacaacctgagcgatggcgcgatggaagatgctctgtacgaaatcgcctccatgcgtctgtttgcccggttatccctggatagcgccttgccg     >  1:1890984‑M2/1‑4 (MQ=255)
                                                                                               gcaTtggtacaacctgagcgatggcgcgatggaagatgctctgtacgaaatcgcctccatgcgtctgtttgcccggttatccctggatagcgccttgccg     >  2:904217‑M2/1‑4 (MQ=255)
                                                                                               gcaTtggtacaacctgagcgatggcgcgatggaagatgctctgtacgaaatcgcctccatgcgtctgtttgcccggttatccctggatagcgccttgccg     <  1:1642427‑M2/100‑97 (MQ=255)
                                                                                               gcaTtggtacaacctgagcgatggcgcgatggaagatgctctgtacgaaatcgcctccatgcgtctgtttgcccggttatccctggatagcgccttgccg     >  1:154191‑M2/1‑4 (MQ=255)
                                                                                               gcaTtggtacaacctgagcgatggcgcgatggaagatgctctgtacgaaatcgcctccatgcgtctgtttgcccggttatccctggatagcgccttgccg     >  2:674821‑M2/1‑4 (MQ=255)
                                                                                               gcaTtggtacaacctgagcgatggcgcgatggaagatgctctgtacgaaatcgcctccatgcgtctgtttgcccggttatccctggatagcgccttgccg     >  1:1440783‑M2/1‑4 (MQ=255)
                                                                                               gcaTtggtacaacctgagcgatggcgcgatggaagatgctctgtacgaaatcgcctccatgcgtctgtttgcccggttatccctggatagcgccttgccg     >  2:3030697‑M2/1‑4 (MQ=255)
                                                                                               gcaTtggtacaacctgagcgatggcgcgatggaagatgctctgtacgaaatcgcctccatgcgtctgtttgcccggttatccctggatagcgccttgccg     >  2:1752275‑M2/1‑4 (MQ=255)
                                                                                               gcaTtggtacaacctgagcgatggcgcgatggaagatgctctgtacgaaatcgcctccatgcgtctgtttgcccggttatccctggatagcgccttgccg     <  1:3823846‑M2/100‑97 (MQ=255)
                                                                                                caTtggtacaacctgagcgatggcgcgatggaagatgctctgtacgaaatcgcctccctgcgtctgtttgcccggttatccctggatagcgccttgccgg    <  1:246254‑M2/100‑98 (MQ=255)
                                                                                                caTtggtacaacctgagcgatggcgcgatggaagatgctctgtacgaaatcgcctccatgcgtctgtttgcccggttatccctggatagcgccttgccgg    <  1:3974551‑M2/100‑98 (MQ=255)
                                                                                                caTtggtacaacctgagcgatggcgcgatggaagatgctctgtacgaaatcgcctccatgcgtctgtttgcccggttatccctggatagcgccttgccgg    >  2:3116712‑M2/1‑3 (MQ=255)
                                                                                                caTtggtacaacctgagcgatggcgcgatggaagatgctctgtacgaaatcgcctccatgcgtctgtttgcccggttatccctggatagcgccttgccgg    <  1:546401‑M2/100‑98 (MQ=255)
                                                                                                caTtggtacaacctgagcgatggcgcgatggaagatgctctgtacgaaatcgcctccatgcgtctgtttgcccggttatccctggatagcgccttgccgg    <  1:1794755‑M2/100‑98 (MQ=255)
                                                                                                caTtggtacaacctgagcgatggcgcgatggaagatgctctgtacgaaatcgcctccatgcgtctgtttgcccggttatccctggatagcgccttgccgg    >  1:3265794‑M2/1‑3 (MQ=255)
                                                                                                caTtggtacaacctgagcgatggcgcgatggaagatgctctgtacgaaatcgcctccatgcgtctgtttgcccggttatccctggatagcgccttgccgg    >  1:3419975‑M2/1‑3 (MQ=255)
                                                                                                caTtggtacaacctgagcgatggcgcgatggaagatgctctgtacgaaatcgcctccatgcgtctgtttgcccggttatccctggatagcgccttgccgg    >  1:592541‑M2/1‑3 (MQ=255)
                                                                                                caTtggtacaacctgagcgatggcgcgatggaagatgctctgtacgaaatagcctccatgcgtctgtttgcccggttatccctggatagcgccttgccgg    <  1:3683433‑M2/100‑98 (MQ=255)
                                                                                                 aTtggtacaacctgagcgatggcgcgatggaagatgctctgtacgaaatcgcctccatgcgtctgtttgcccggttatccctggatagcgccttgccgga   <  2:3906980‑M2/100‑99 (MQ=255)
                                                                                                  ttggtccaaccggagcgatggcgcgatggaagatgctctgtacgacatcgcctccatgcttctgtttgcccggttatccctggatagcgccttgccgga   >  2:3474604‑M2/1‑1 (MQ=255)
                                                                                                  ttggtacaacctgagcgatggcgcgatggaagatgctctgtacgcaatcgcctccatgcgtctgtttgcccggttatccctggatagcgccttgccggac  >  1:3876277‑M2/1‑1 (MQ=255)
                                                                                                  ttggtacaacctgagcgatggcgcgatggaagatgctctgtacgaaatcgcctccatgcgtctgtttgcccggttatccctggatagcgccttgccggac  >  2:221691‑M2/1‑1 (MQ=255)
                                                                                                  ttggtacaacctgagcgatggcgcgatggaagatgctctgtacgaaatcgcctccatgcgtctgtttgcccggttatccctggatagcgccttgccggac  >  2:3314980‑M2/1‑1 (MQ=255)
                                                                                                  ttggtacaacctgagcgatggcgcgatggaagatgctctgtacgaaatcgcctccatgcgtctgtttgcccggttatccctggatagcgccttgccggac  >  1:4055688‑M2/1‑1 (MQ=255)
                                                                                                  |                                                                                                   
TCGGGCAAACAGGCGCATGGAGGCGATTTCGTACAGGGCATCTTCCATGGCACCGTCGCTCAGGTTGTACCAATGCTGCATGCAGTGAATACGCAGCATGGTCTCCAGCGGATAGGGCCGTCGGCCATTGCCCGCCTTGGGATAAAACGGCTCGATGACAGCGGTCATATTCTGCCATGGCAGAATCTGCTCCATGCG  >  NC_000913/1428451‑1428648

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.