Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_000913 1,608,707 C→T 15.1% D106N (GAT→AAT)  yneE ← bestrophin family putative inner membrane protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009131,608,7070CT15.1% 224.6 / 30.0 100D106N (GAT→AAT) yneEbestrophin family putative inner membrane protein
Reads supporting (aligned to +/- strand):  ref base C (47/37);  new base T (7/8);  total (55/45)
Fisher's exact test for biased strand distribution p-value = 5.80e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.48e-01

Only 100 of 103 total aligned reads displayed.

GAGCCAGCACTTCCGCCTGTGGCTGTTTGCGTAATGTCATGCGTAAACAGTGGGCGAAAGCGATTTGCAGCCGGGCAAACTCCCTTACACTTGCCGAATCCGGCAATGTCGTTTTTACCTCGCGCAGTAACGACCGTGAGGCAATCATCAACTGCCCCCAAAGTTTTCGCGCTTCAACGTAACGGGCGTACCCGGCATT  >  NC_000913/1608608‑1608806
                                                                                                   |                                                                                                   
gAGCCAGCACTTCCGCCTGTGGCTGTTTGCGTAATGTCATGCGTAAACAGTGGGCGAAAGCGATTTGCAGCCGGGCAAACTCCCTTACACTTGCCGAATc                                                                                                     >  1:1101846/1‑100 (MQ=255)
 aGCCAGCACTTCCGCCTGTGGCTGTTTGCGTAATGTCATGCGTAAACAGTGGGCGAAAGCGATTTGCAGCCGGGCAAACTCCCTTACACTTGCCGAATcc                                                                                                    >  2:2937157/1‑100 (MQ=255)
  gCCAGCACTTCCGCCTGTGGCTGTTTGCGTAATGTCATGCGTAAACAGTGGGCGAAAGCGATTTGCAGCCGGGCAAACTCCCTTACACTTGCCGAATCCg                                                                                                   <  2:4050179/100‑1 (MQ=255)
  gCCAGCACTTCCGCCTGTGGCTGTTTGCGTAATGTCATGCGTAAACAGTGGGCGAAAGCGATTTGCAGCCGGGCAAACTCCCTTACACTTGCCGAATCCg                                                                                                   <  2:1689713/100‑1 (MQ=255)
   ccAGCACTTCCGCCTGTGGCTGTTTGCGTACTGTCATGCGTAAACAGTGGGCGAAAGCGATTTGCAGCCGGGCAAACTCCCTTACACTTGCCGAATCCgg                                                                                                  >  2:935817/1‑100 (MQ=255)
   ccAGCACTTCCGCCTGTGGCTGTTTGCGTAATGTCATGCGTAAACAGTGGGCGAAAGCGATTTGCAGCCGGGCAAACTCCCTTACACTTGCCGAATCCgg                                                                                                  >  1:1499751/1‑100 (MQ=255)
       cACTTCCGCCTGTGGCTGTTTGCGTAATGTCATGCGTAAACAGTGGGCGAAAGCGATTTGCAGCCGGGCAAACTCCCTTACACTTGCCGGATTCGGCaan                                                                                              <  1:1963528/100‑2 (MQ=255)
       cACTTCCGCCTGTGGCTGTTTGCGTAATGTCATGCGTAAACAGTGGGCGAAAGCGATTTGCAGCCGGGCAAACTCCCTTACACTTGCCGGATTCGGCaag                                                                                              <  2:825163/100‑2 (MQ=255)
       cACTTCCGCCTGTGGCTGTTTGCGTAATGTCATGCGTAAACAGTGGGCGAAAGCGATTTGCAGCCGGGCAAACTCCCTTACACTTGCCGAATCCGGCAAt                                                                                              <  1:2364161/100‑1 (MQ=255)
        aCTTCCGCCTGTGGCTGTTTGCGTAATGTCATGCGTAAACAGTGGGCGAAAGCGATTTGCAGCCGGGCAAACTCCCTTACACTTGCCGGATTCGGCaagt                                                                                             <  1:2322449/100‑3 (MQ=255)
         cTTCCGCCTGTGGCTGTTTGCGTAATGTCATGCGTAAACAGTGGGCGAAAGCGATTTGCAGCCGGGCAAACTCCCTTACACTTGCCGGATTCGGCaagtg                                                                                            <  1:3338177/100‑4 (MQ=255)
         cTTCCGCCTGTGGCTGTTTGCGTAATGTCATGCGTAAACAGTGGGCGAAAGCGATTTGCAGCCGGGCAAACTCCCTTACACTTGCCGAATCCGGCAATGt                                                                                            <  1:2762531/100‑1 (MQ=255)
          ttCCGCCTGTGGCTGTTTGCGTAATGTCATGCGTAAACAGTGGGCGAAAGCGATTTGCAGCCGGGCAAACTCCCTTACACTTGCCGGATTCGGCaagtgt                                                                                           <  1:969074/100‑5 (MQ=255)
          ttCCGCCTGTGGCTGTTTGCGTAATGTCATGCGTAAACAGTGGGCGAAAGCGATTTGCAGCCGGGCAAACTCCCTTACACTTGCCGGATTCGGCaagtg                                                                                            <  2:3191770/99‑4 (MQ=255)
           tCCGCCTGTGGCTGTTTGCGTAATGTCATGCGTAAACAGTGGGCGAAAGCGATTTGCAGCCGGGCAAACTCCCTTACACTTGCCGGATTCGGCaagtgta                                                                                          >  1:361509/1‑95 (MQ=255)
           tCCGCCTGTGGCTGTTTGCGTAATGTCATGCGTAAACAGTGGGCGAAAGCGATTTGCAGCCGGGCAAACTCCCTTACACTTGCCGAATCCGGCAATGTCg                                                                                          >  2:724178/1‑100 (MQ=255)
            ccGCCTGTGGCTGTTTGCGTAATGTCATGCGTAAACAGTGGGCGAAAGCGATTTGCAGCCGGGCAAACTCCCTTACACTTGCCGAATCCGGCAATGTCg                                                                                          >  2:2525724/1‑99 (MQ=255)
            ccGCCTGTGGCTGTTTGCGTAATGTCATGCGTAAACAGTGGGCGAAAGCGATTTGCAGCCGGGCAAACTCCCTTACACTTGCCGAATCCGGCAATGTCGt                                                                                         <  2:300386/100‑1 (MQ=255)
             cGCCTGTGGCTGTTTGCGTAATGTCATGCGTAAACAGTGGGCGAAAGCGATTTGCAGCCGGGCAAACTCCCTTACACTTGCCGGATTCGGCaagtgtaag                                                                                        <  2:361506/100‑8 (MQ=255)
             cGCCTGTGGCTGTTTGCGTAATGTCATGCGTAAACAGTGGGCGAAAGCGATTTGCAGCCGGGCAAACTCCCTTACACTTGCCGAATCCGGCAATGTCGtt                                                                                        >  1:3768291/1‑100 (MQ=255)
             cGCCTGTGGCTGTTTGCGTAATGTCATGCGTAAACAGTGGGCGAAAGCGATTTGCAGCCGGGCAAACTCCCTTACACTTGCCGAATCCGGCAATGTCGt                                                                                         >  1:3182437/1‑99 (MQ=255)
             cGCCTGTGGCTGTTTGCGTAATGCCATGCGTAAACAGTGGGCGAAAGCGATTTGCAGCCGGGCAAACTCCCTTACACTTGCCGAATCCGGCAATGTCGtt                                                                                        <  1:1889211/100‑1 (MQ=255)
             cGCCTGGGGCTGTTAGCGTAATGCCATGCGTAAACAGTGGGCGAAAGCGATTTGCAGCCGGGCAAACACGCTTACACTTGCCGAATACGGCAATGTCg                                                                                          >  2:1023609/1‑98 (MQ=255)
                 tgtgGCTGTTTGCGTAATGTCATGCGTAAACAGTGGGCGAAAGCGATTTGCAGCCGGGCAAACTCCCTTACACTTGCCGAATCCGGCAATGTCGTTTTTa                                                                                    <  2:1408064/100‑1 (MQ=255)
                  gtgGCTGTTTGCGTAATGTCATGCGTAAACAGTGGGCGAAAGCGATTTGCAGCCGGGCAAACTCCCTTACACTTGCCGAATCCGGCAATGTCGTTTTTAc                                                                                   <  2:1814157/100‑1 (MQ=255)
                   tgGCTGTTTGCGTAATGTCATGCGTAAACAGTGGGCGAAAGCGATTTGCAGCCGGGCAAACTCCCTTACACTTGCCGAATCCGGCAATGTCGTTTTTAc                                                                                   <  2:1028490/99‑1 (MQ=255)
                   tgGCTGTTTGCGTAATGTCATGCGTAAACAGTGGGCGAAAGCGATTTGCAGCCGGGCAAACACCCTTACACTTGCCGAATCCGGCAATGTCGTTTTTAcc                                                                                  >  2:295644/1‑100 (MQ=255)
                    ggCTGTTTGCGTAATGTCATGCGTAAACAGTGGGCGAAAGCGATTTGCAGCCGGGCAAACTCCCTTACACTTGCCGAATCCGGCAATGTCGTTTTTACCt                                                                                 >  1:2985837/1‑100 (MQ=255)
                     gCTGTTTGCGTAATGTCATGCGTAAACAGTGGGCGAAAGCGATTTGCAGCCGGGCAAACTCCCTTACACTTGCCGAATCCGGCAATGTCGTTTTTACCTc                                                                                >  2:3295418/1‑100 (MQ=255)
                      cTGTTTGCGTAATGTCATGCGTAAACAGTGGGCGAAAGCGATTTGCAGCCGGGCAAACTCCCTTACACTTGCCGAATCCGGCAATGTCGTTTTTACCTcg                                                                               <  1:69040/100‑1 (MQ=255)
                      cTGTTTGCGTAATGTCATGCGTAAACAGTGGGCGAAAGCGATTTGCAGCCGGGCAAACTCCCTTACACTTGCCGAATCCGGCAATGTCGTTTTTACCTcg                                                                               <  2:69245/100‑1 (MQ=255)
                       tGTTTGCGTAATGTCATGCGTAAACAGTGGGCGGAAGCGATTTGGAGCCGAGCAAACTCCATTACACTTGCCGAATCCGGCAATGTCGTTTTTACCTcgc                                                                              >  2:1995190/1‑100 (MQ=255)
                        gTTTGCGTAATGTCATGCGTAAACAGTGGGCGAAAGCGATTTGCAGCCGGGCAAACTCCCTTACACTTGCCGAATCCGGCAATGTCGTTTTTACCTcgcg                                                                             >  1:2237886/1‑100 (MQ=255)
                           tGCGTAATGTCATGCGTGAACAGTGGGCGAAAGCGATTTGCAGCCGGGCAAACTCCCTTACACTTGCCGAATCCGGCAATGTCGTTTTTACCTCGCGCAg                                                                          >  2:2966545/1‑100 (MQ=255)
                           tGCGTAATGTCATGCGTAAACAGTGGGCGAAAGCGATTTGCAGCCGGGCAAACTCCCTTACACTTGCCGAATCCGGCAATGTCGTTTTTACCTCGCGCAg                                                                          <  1:1247039/100‑1 (MQ=255)
                            gCGTAATGTCATGCGTAAACAGTGGGCGAAAGCGATTTGCAGCCGGGCAAACTCCCTTACACTTGCCGAATCCGGCAATGTCGTTTTTACCTCGCGCAGt                                                                         >  1:274004/1‑100 (MQ=255)
                            gCGTAATGTCATGCGTAAACAGTGGGCGAAAGCGATTTGCAGCCGGGCAAACTCCCTTACACTTGCCGAATCCGGCAATGGCGTTTTTACCTCGCGCAGt                                                                         >  2:4065061/1‑100 (MQ=255)
                            gCGTAATGTCATGCGTAAACAGTGGGCGAAAGCGATTTGCAGCCGGGCAAACACCCTTACACTTGCCGAATCCGGCAATGTCGTTTTTACCTCGCGCAGt                                                                         >  2:428781/1‑100 (MQ=255)
                            gCGTAATGTCATGCGTAAACAGTGGGCGAAACCGATTGGCAGCCGGGCAAACTCCCTTACACTTGCCGAATCCGGCAATGTCGTTTTTACCTCGCGCAGt                                                                         <  2:2795726/100‑1 (MQ=255)
                              gtagtggtaTGCGTGAACAGTGGGTGAAAGCGAGTTGCAGCCGTGCAGACTCCCTTACGCTGGGCGAATCCGGCAATGTCGTTTTTACCTCGCGCAGTa                                                                        <  2:1796543/91‑1 (MQ=255)
                               tAATGTCATGCGTAAACAGTGGGCGAAAGCGATTTGCAGCCGGGCAAACTCCCTTACACTTGCCGAATCCGGCAATGTCGTTTTTACCTCGCGCAGTAAc                                                                      >  1:288440/1‑100 (MQ=255)
                                aaTGTCATGCGTAAACAGTGGGCGAAAGCGATTTGCAGCCGGGCAAACTCCCTTACACTTGCCGAATCCGGCAATGTCGTTTTTACCTCGCGCAGTAACg                                                                     <  2:1303191/100‑1 (MQ=255)
                                         cGTAAACAGTGGGCGAAAGCGATTTGCAGCCGAGCAAACTCCCTTACACTTGCCGAATCCGGCAATGTCGTTTTTACCTCGCGCAGTAACGACCGTGAgg                                                            <  2:1450175/100‑1 (MQ=255)
                                          gTAAACAGTGGGCGAAAGCGATTTGCAGCCGGGCAAACTCCCTTACACTTGCCGAATCCGGCAATGTCGTTTTTACCTCGCGCAGTAACGACCGTGAGGc                                                           <  1:3295438/100‑1 (MQ=255)
                                            aaaCAGTGGGCGAAAGCGATTTGCAGCCGGGCAACCTCCCTTACACTTGCCGAATCCGGCAATGTCGTTTTTACCTCGCGCAGTAACGACCGTGAGGc                                                           <  1:262366/98‑1 (MQ=255)
                                               cAGTGGGCGAAAGCGATTTGCAGCCGGGCAAACTCCCTTACACTTGCCGAATCCGGCAATGTCGTTTTTACCTCGCGCAGTAACGACCGTGAGGCAatca                                                      <  1:1364914/100‑1 (MQ=255)
                                               cAGTGGGCGAAAGCGATTTGCAGCCGGGCAAACTCCCTTACACTTGCCGAATCCGGCAATGTCGTTTTTACCTCGCGCAGTAACGACCGTGAGGCAatca                                                      <  2:2802592/100‑1 (MQ=255)
                                               cAGTGGGCGAAAGCGATTTGCAGCCGGGCAAACTCCCTTACACTTGCCGAATCCGGCAATGTCGTTTTTACCTCGCGCAGTAACGACCGTGAGGCAatca                                                      <  1:2937230/100‑1 (MQ=255)
                                               aaGTGGGCGGAAGAGATTTGCAGCCGGGCCAACTTACTTACACATGCACACTCCACCAAGGCCGTTTACACCTCGCGAAGTAAAGACCggcgggca                                                          >  2:2889932/2‑89 (MQ=255)
                                                aGTGGGCGAAAGCTATTTGCAGCCGGGCAAACTCCCTTGCACTTGCAGAATCCGGCAATGTCGTTTTAACCTCGCGCAGTGACGACAGTGAGGCAatcat                                                     >  2:2546710/1‑100 (MQ=255)
                                                aGTGGGCGAAAGCGATTTGCAGCCGGGCAAACTCCCTTACACTTGCCGAATCCGGCAATGTCGTTTTTACCTCGCGCAGTAACGACCGTGAGGCAatcat                                                     <  2:1286724/100‑1 (MQ=255)
                                                 gTGGGCGAAAGCGATTTGCAGCCGGGCAAACTCCCTTACACTTGCCGAATCCGGCAATGTCGTTTTTACCTCGCGCAGTAACGACCGTGAGGCAatcatc                                                    >  1:1576172/1‑100 (MQ=255)
                                                 gTGGGCGAAAGCGATTTGCAGCCGGGCAAACTCCCTTACACTTGCCGAATCCGGCAATGTCGTTTTTACCTCGCGCAGTAACGACCGTGAGCCAatcatc                                                    >  1:4093319/1‑100 (MQ=255)
                                                  tGGGCGAAAGCGATTTGCAGCCGGGCAAACTCCCTTACACTTGCCGAATCCGGCAATGTCGTTTTTACCTCGCGCAGTAACGACCGTGAGGCAAtcatca                                                   <  1:2534735/100‑1 (MQ=255)
                                                    ggCGAAAGCGATTTGCAGCCGGGCAAACTCCCTTACACTTGCCGAATCCGGCAATGTCGTTTTTACCTCGCGCAGTAACGACCGTGAGGCAATCATCAAc                                                 <  1:1738157/100‑1 (MQ=255)
                                                     gCGAAAGCGATTTGCAGCCGGGCAAACTCCCTTACACTTGCCGAATCCGGCAATGTCGTTTTTACCTCGCGCAGTAACGACCGTGAGGCAATCATCAACt                                                >  2:1522725/1‑100 (MQ=255)
                                                      cGAAAGCGATTTGCAGCCGGGCAAACTCCCTTACACTTGCCGAATCCGGCAATGTCGTTTTTACCTCGCGCAGTAACGACCGTGAGGCAATCATCAACTg                                               >  1:3863989/1‑100 (MQ=255)
                                                         aaGCGATTTGCAGCCGGGCAAACTCCCTTACACTTGCCGAATCCGGCAATGTCGTTTTTACCTCGCGCAGTAACGACCGTGAGGCAATCATCAACTGccc                                            >  2:2172940/1‑100 (MQ=255)
                                                           gCGATTTGCAGCCGGGCAAACTCCCTTACACTTGCCGAATCCGGCAATGTCGTTTTTACCTCGCGCAGTAACGACCGTGAGGCAATCATCAACTGccccc                                          <  2:1057602/100‑1 (MQ=255)
                                                             gATTTGCAGCCGGGCAAACTCCCTTACACTTGCCGAATCCGGCAATGTCGTTTTTACCTCGCGCAGTAACGACCGTGAGGCAATCATCAACTGCCCCCaa                                        >  2:2783672/1‑100 (MQ=255)
                                                              aattGCAGCCGGGCAAACTCCCTTACACTTGCCGAATCCGGCAATGTCGTTTTTACCTCGCGCAGTAACGACCGTGAGGCAATCATCAACTGCCCCCaaa                                       >  1:3826007/3‑100 (MQ=255)
                                                                 tGCAGCCGGGCAAACTCCCTTACACTTGCCGAATCCGGCAATGTCGTTTTTACCTCGCGCAGTAACGACCGTGAGGCAATCATCAACTGCCCCCAAAGtt                                    >  1:1366580/1‑100 (MQ=255)
                                                                  gCAGCCGGGCAAACTCCCTTACACTTGCCGAATCCGGCAATGTCGTTTTTACCTCGCGCAGTAACGACCGTGAGGCAATCATCAACTGCCCCCAAAGttt                                   >  1:1629497/1‑100 (MQ=255)
                                                                  gCAGCCGGGCAAACTCCCTTACACTTGCCGAATCCGGCAATGTCGTTTTTACCTCGCGCAGTAACGACCGTGAGGCAATCATCAACTGCCCCCAAAGttt                                   >  1:2906220/1‑100 (MQ=255)
                                                                   cAGCCGGGCAAACTCCCTTACACTTGCCGAATCCGGCAATGTCGTTTTTACCTCGCGCAGTAACGACCGTGAGGCAATCATCAACTGCCCCCAAAGtttt                                  <  2:65242/100‑1 (MQ=255)
                                                                   cAGCCGGGCAAACTCCCTTACACTTGCCGAATCCGGCAATGTCGTTTTTACCTCGCGCAGTAACGACCGTGAGGCAATCATCAACTGCCCCCAAAGttt                                   >  2:3013730/1‑99 (MQ=255)
                                                                     gCCGGGCAAACTCCCTTACACTTGCCGAATCCGGCAATGTCGTTTTTACCTCGCGCAGTAACGACCGTGAGGCAATCATCAACTGCCCCCAAAGTTTTcg                                <  1:1198661/100‑1 (MQ=255)
                                                                     gCCGGGCAAACTCCCTTACACTTGCCGAATCCGGCAATGTCGTTTTTACCTCGCGCAGTAACGACCGTGAGGCAATCATCAACTGCCCCCAAAGTTTTcg                                >  2:3592071/1‑100 (MQ=255)
                                                                     gCCGGGCAAACTCCCTTACACTTGCCGAATCCGGCAATGTCGTTTTTACCTCGCGCAGTAACGACCGTGAGGCAATCATCAACTGCCCCCAAAGTTTTcg                                <  1:3522530/100‑1 (MQ=255)
                                                                        gggCAAACTCCCTTACACTTGCCGAATCCGGCAATGTCGTTTTTACCTCGCGCAGTAACGACCGTGAGGCAATCATCAACTGCCCCCAAAGTTTTcg                                >  2:3007429/1‑97 (MQ=255)
                                                                         ggCAAACTCCCTTACACTTGCCGAATCCGGCAATGTCGTTTTTACCTCGCGCAGTAACGACCGTGAGGCAATCATCAACTGCCCCCAAAGTTTTCGCGCt                            <  1:3769627/100‑1 (MQ=255)
                                                                          gCAAACTCCCTTACACTTGCCGAATCCGGCAATGTCGTTTTTACCTCGCGCAGTAACGACCGTGAGGCAATCATCAACTGCCCCCAAAGTTTTCGCGCtt                           >  1:2770901/1‑100 (MQ=255)
                                                                             aaCTCCCTTACACTTGCCGAATCCGGCAATGTCGTTTTTACCTCGCGCAGTAACGACCGTGAGGCAATCATCAACTGCCCCCAAAGTTTTCGCGCTTCaa                        <  2:1868240/100‑1 (MQ=255)
                                                                             aaCTCCCTTACACTTGCCGAATCCGGCAATGTCGTTTTTACCTCGCGCAGTAACGACCGTGAGGCAATCATCAACTGCCCCCAAAGTTTTCGCGCTTCaa                        >  1:943251/1‑100 (MQ=255)
                                                                             aaCTCCCTTACACTTGCCGAATCCGGCAATGTCGTTTTTACCTCGCGCAGTAACGACCGTGAGGCAATCATCAACTGCCCCCAAAGTTTTCGCGCTTCaa                        >  1:243267/1‑100 (MQ=255)
                                                                               cTCCCTTACACTTGCCGAATCCGGCAATGTCGTTTTTACCTCGCGCAGTAACGACCGTGAGGTAATCATCAACTGCCCCCAAAGTTTTCGCGCTTCAACg                      >  1:2922977/1‑100 (MQ=255)
                                                                               cTCCCTTACACTTGCCGAATCCGGCAATGTCGTTTTTACCTCGCGCAGTAACGACCGTGAGGCAATCATCAACTGCCCCCAAAGTTTTCGCGCTTCAACg                      >  2:3023128/1‑100 (MQ=255)
                                                                                 cccTTACACTTGCCGAATCCGGCAATGTCGTTTTTACCTCGCGCAGTAACGACCGTGAGGCAATCATCAACTGCCCCCAAAGTTTTCGCGCTTCAACGTa                    >  1:2466674/1‑100 (MQ=255)
                                                                                    acgacattGCCGGATTCGGCAATGTCGTTTTTACCTCGCGCAGTAACGACCGTGAGGCAATCATCAACTGCCCCCAAAGTTTTCGCGCTTCAACGTAACg                 >  1:1654750/7‑100 (MQ=255)
                                                                                     tACACTTGCCGAATCCGGCAATGTCGTTTTTACCTCGCGCAGTAACGACCGTGAGACAATCATCAACTGCCCCCAAAGTTTTCGCGCTTCAACGTAACgg                <  2:4093292/100‑1 (MQ=255)
                                                                                     cgacattGCCGGATTCGGCAATGTCGTTTTTTTTTTTTTTAGTAACGACCATAAGGCAATCATAAAATACCTCCAAAGTTTTAGCTCTTtaacgtaacg                 >  2:1892039/6‑99 (MQ=255)
                                                                                     cgacattGCCGGATTCGGCAATGTCGTTTTTACCTCGCGCAGTAACGACCGTGAGGCAATCATCAACTGCCCCCAAAGTTTTCGCGCTTCAACGTAACgg                >  1:1232897/6‑100 (MQ=255)
                                                                                     cgacattGCCGGATTCGGCAATGTCGTTTTTACCTCGCGCAGTAACGACCGTGAGGCAATCATCAACTGCCCCCAAAGTTTTCGCGCTTCAACGTAACgg                >  2:2420512/6‑100 (MQ=255)
                                                                                     cgacattGCCGGATTCGGCAATGTCGTTTTTACCTCGCGCAGTAACGACCGTGAGGCAATCATCAACTGCCCCCAAAGTTTTCGCGCTTCAACGTAACgg                >  1:9905/6‑100 (MQ=255)
                                                                                     cgacattGCCGGATTCGGCAATGTCGTTTTTACCTCGCGCAGTAACGACCAAGAGGCAGTCATAAAATGCCCCCAAAGTATTCGCGCGTCAGAGTAAcag                >  2:1094580/6‑98 (MQ=255)
                                                                                      acacTTGCCGAATCCGGCAATGTCGTTTTTACCTCGCGCAGTAACGACCGTGAGGCAATCATCAACTGCCCCCAAAGTTTTCGCGCTTCAACGTAACggg               <  1:2615750/100‑1 (MQ=255)
                                                                                         cTTGCCGAATCCGGCAATGTCGTTTTTACCTCGCGCAGTAACGACCGTGAGGCAATCATCAACTGCCCCCAAAGTTTTCGCGCTTCAACGTAACGGGCGt            <  1:2551308/100‑1 (MQ=255)
                                                                                         cTTGCCGAATCCGGCAATGTCGTTTTTACCTCGCGCAGTAACGACCGTGAGGCAATCATCAACTGCCCCCAAAGTTTTCGCGCTTCAACGTAACGGGCGt            >  1:288341/1‑100 (MQ=255)
                                                                                          ttGCCGAATCCGGCACTGTCGTTTTTACCTCGCGCAGTAACGACCGTGAGGCAATCATGAACTGCCCCCAAAGTTTTCGCGCTTCAACGTCACGGGCGt            >  2:926756/1‑99 (MQ=255)
                                                                                          ttGCCGAATCCGGCAATGTCGTTCTTACCTCGCGCAGTAACGACCGTGAGGCAATCATCAACTGCCCCCAAAGTTTTCGCGCTTCAACGTCACGGGc              >  2:3569205/1‑97 (MQ=255)
                                                                                           tGCCGAATCCGGCAATGTCGTTTTTACCTCGCGCAGTAACGACCGTGAGGCAATCATCAACTGCCCCCAAAGTTTTCGCGCTTCAACGTAACGGGCGTAc          >  1:30697/1‑100 (MQ=255)
                                                                                           tGCCGAATCCGGCAATGTCGTTTTTACCTCGCGCAGTAACGACCGTGAGGCAATCATCAACTGCCCCCAAAGTTTTCGCGCTTCAACGTAACGGGCGTAc          >  1:364207/1‑100 (MQ=255)
                                                                                           tGCCGAATCCGGCAATGTCGTTTTTACCTCGCGCAGTAACGACCGTGAGGCAATCATAAACTGCCCCCAAAGTTTACGCGCTTCAACGTAACGGGCGTAc          >  2:3515741/1‑100 (MQ=255)
                                                                                              cGAATCCGGCAATGTCGTTTTTACCTCGCGCAGTAACGACCGTGAGGCAATCATCAACTGCCCCCAAAGTTTTCGCGCTTCAACGTAACGGGCGTACCCg       >  2:1926363/1‑100 (MQ=255)
                                                                                               gAATCCGGCAATGTCGTTTTTACCTCGCGCAGTAACGACCGTGAGGCAATCATCAACTGCCCCCAAAGTTTTCGCGCTTCAACGTAACGGGCGTACCCgg      >  2:3008801/1‑100 (MQ=255)
                                                                                                 aTCCGGCAATGTCGTTTTTACCTCGCGCAGTAACGACCGTGAGGCAATCATCAACTGCCCCCAAAGTTTTCGCGCTTCAACGTAACGGGCGTACCCGGCa    >  1:554187/1‑100 (MQ=255)
                                                                                                 aTCCGGCAATGTCGTTTTTACCTCGCGCAGTAACGACCGTGAGGCAATCATCAACTGCCCCCAAAGTTTTCGCGCTTCAACGTAACGGGCGTACCCGGCa    <  2:2423360/100‑1 (MQ=255)
                                                                                                  tCCGGCAATGTCGTTTTTACCTCGCGCAGTAACGACCGTGAGGCAATCATCAACTGCCCCCAAAGTTTTCGCGCTTCAACGTAACGGGCGTACCCGGc     >  1:324952/1‑98 (MQ=255)
                                                                                                  tCCGGCAATGTCGTTTTTACCTCGCGCAGTAACGACCGTGAGGCAATCATCAACTGCCCCCAAAGTTTTCGCGCTTCAACGTAACGGGCGTACCCGGCat   <  1:1506500/100‑1 (MQ=255)
                                                                                                   ccGGCAATGTCGTTTTTACCTCGCGCAGTAACGACCGTGAGGCAATCATCAACTGCCCCCAAAGTTTTCGCGCTTCAACGTAACGGGCGTACCCGGCatt  <  1:1414255/100‑1 (MQ=255)
                                                                                                   |                                                                                                   
GAGCCAGCACTTCCGCCTGTGGCTGTTTGCGTAATGTCATGCGTAAACAGTGGGCGAAAGCGATTTGCAGCCGGGCAAACTCCCTTACACTTGCCGAATCCGGCAATGTCGTTTTTACCTCGCGCAGTAACGACCGTGAGGCAATCATCAACTGCCCCCAAAGTTTTCGCGCTTCAACGTAACGGGCGTACCCGGCATT  >  NC_000913/1608608‑1608806

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: