| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 1,988,339 | C→T | 56.9% | Q40* (CAG→TAG) | yecR → | lipoprotein, function unknown |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,988,339 | 0 | C | T | 56.9% | 42.5 / 130.0 | 109 | Q40* (CAG→TAG) | yecR | lipoprotein, function unknown |
| Reads supporting (aligned to +/- strand): ref base C (23/24); new base T (35/27); total (58/51) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.46e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.21e-01 | |||||||||||
Only 100 of 111 total aligned reads displayed.
TCTTTCATTAATAACGCTGGCGGGGTGTACGGTTACTCGCCAAGCCCATGTGAGCGAAGTTGACGCGGCAACAGGTATTGTACGGTTAGTTTATGACCAGGCTTTTTTGCAGCATGCCCATACCGATCGTTATGTCAGTCGCGGGATCGCCGATCGCGCATGCCAGCAGGAAGGCTATACCCACGCGGTCCCCTTTG > NC_000913/1988242‑1988438 | tttCATTAATAACGCTGGCGGGGTGTACGGTTACTCGCCAAGCCCATGTGCGCGAAGTTGACGCGGCAACAGGTATTGTACGGTTAGTTTATGACTAGGc > 2:4022490/1‑100 (MQ=255) tttCATTAATAACGCTGGCGGGGTGTACGGTTACTCGCCAAGCCCATGTGAGCGAAGTTGACGCGGCAACAGGTATTGTACGGTTAGTTTATGACCAGGc > 1:1115076/1‑100 (MQ=255) ttCGTTAATAGCGCTGGGGGGGTGTACGGTTACTCGCCAAGCACGTGTGAGCGAAGTTGACGCGGCAACAGGTATTGGACGGTTAGTTTATGACCAGGc < 2:3537562/99‑1 (MQ=255) ttCATTAATAACGCTGGCGGGGTGTACGGTTACTCGCCAAGCCCATGTGAGCGAAGTTGACGCGGCAACAGGTATTGTACGGTTAGTTTATGACTAGGCt > 1:407021/1‑100 (MQ=255) ttCATTAATAACGCTGGCGGGGTGTACGGTTACTCGCCAAGCCCATGTGAGCGAAGTTGACGCGGCAACAGGTATTGTACGGTTAGTTTATGACCAGGCt > 1:16532/1‑100 (MQ=255) ttCATTAATAACGCTGGCGGGGTGTACGGTTACGCGCCAAGCCCATGTGAGCGAAGTTGACGCGGCAACAGGTATTGTACGGTTAGTTTATGACTAGGc < 2:1327347/99‑1 (MQ=255) tCATTAATAACGCTGGCGGGGTGTACGGTTACTCGCCAAGCCCATGTGAGCGAAGTTGACGCGGCAACAGGTATTGTACGGTTAGTTTATGACTAGGCtt > 1:96964/1‑100 (MQ=255) cATTAATAACGCTGGCGGGGTGTACGGTTACTCGCCAAGCCCATGTGAGCGAAGTTGACGCGGCAACAGGTATTGTACGGTTAGTTTATGACTAGGCttt > 2:1415945/1‑100 (MQ=255) aTTAATAACGCTGGCGGGGTGTACGGTTACTCGCCAAGCCCATGTGAGCGAAGTTGACGCGGCAACAGGTATTGTACGGTTAGTTTATGACTAGGCtttt > 1:1268675/1‑100 (MQ=255) ttAATAACGCTGGCGGGGTGTACGGTTACTCGCCAAGCCCATGTGAGCGAAGTTGACGCGGCAACAGGTATTGTACGGTTAGTTTATGACTAGGCttttt < 1:1541166/100‑1 (MQ=255) taataaCGCTGGCGGGGTGTACGGTTACTCGCCAAGCCCATGTGAGCGAAGTTGACGCGGCAACAGGTATTGTACGGTTAGTTTATGACCAGGCtttttt < 2:3064212/100‑1 (MQ=255) ataaCGCTGGCGGGGTGTACGGTTACTCGCCAAGCCCATGTGAGCGAAGTTGACGCGGCAACAGGTATTGTACGGTTAGTTTATGACTAGGCTTTTTTgc > 2:3153511/1‑100 (MQ=255) ataaCGCTGGCGGGGTGTACGGTTACTCGCCAAGCCCATGTGAGCGAAGTTGACGCGGCAACAGGTATTGTACGGTTAGTTTATGACTAGGCTTTTTTgc < 2:2834808/100‑1 (MQ=255) ataaCGCTGGCGGGGTGTACGGTTACTCGCCAAGCCCATGTGAGCGAAGTTGACGCGGCAACAGGTATTGTACGGTTAGTTTATGACCAGGCTTTTTTgc > 2:1338885/1‑100 (MQ=255) ataaCGCTGGCGGGGTGTACGGTTACTCGCCAAGCCCATGTGAGCGAAGTTGACGCGGCAACAGGTATTGTACGGTTAGTTTATGACCAGGCTTTTTTgc > 1:2896742/1‑100 (MQ=255) accGCTGGCGGGGTGTACGGTTACTCGCCAAGCCCATGTGAGCGAAGTTGACGCGGCAACAGGTATTGTACGGTTAGTTTATGACTAGGCTTTTTTg < 2:2462446/95‑1 (MQ=255) aaCGCTGGCGGGGTGTACGGTTACTCGCCAAGCCCATGTGAGCGAAGTTGACGCGGCAACAGGTATTGTACGGTTAGTTTATGACCAGGCTTTTTTgcag > 1:2136551/1‑100 (MQ=255) cTGGCGGGGTGTACGGTTACTCGCCAAGCCCATGTGAGCGAAGTTGACGCGGCAACAGGTATTGTACGGTTAGTTTATGACTAGGCTTTTTTGCAGCATg > 1:1259436/1‑100 (MQ=255) ggCGGAGTGTACGGTTACTCTCCAAGCCCATGTGAGCGAAGTTGACGCGGCAACAGGTATTGTACGGTTAGTTTATGACTAGGCTTTTTTGCAGCATGcc < 1:2868933/100‑1 (MQ=255) ggggTGTACGGTTACTCGCCAAGCCCATGTCAGCGAAGTTGACGTGGCAACATGTATTGTACGGTTAGTTTATGACTAGGCTTTTTTGCAGCATGCCCa < 2:468933/99‑1 (MQ=255) ggTGTACGGTTACTCGCCAAGCCCATGTGAGCGAAGTTGACGCGGCAACAGGTATTGTACGGTTAGTTTATGACTAGGCTTTTTTGCAGCATGCCCATAc < 2:2134645/100‑1 (MQ=255) gtgtACGGTTACTCGCCAAGCCCATGTGAGCGAAGTTGACGCGGCAACAGGTATTGTACGGTTAGTTTATGACTAGGCTTTTTTGCAGCATGCCCATAcc < 2:407018/100‑1 (MQ=255) gtgtACGGTTACTCGCCAAGCCCATGTGAGCGAAGTTGACGCGGCAACAGGTATTGTACGGTTAGTTTATGACTAGGCTTTTTTGCAACATGCCCATAcc < 2:2364945/100‑1 (MQ=255) gtgtACGGTTACTCGCCAAGCCCATGTGAGCGAAGTTGACGCGGCAACAGGTATTGTACGGTTAGTTTATGACCAGGCTTTTTTGCAGCATGCCCATAcc < 1:753268/100‑1 (MQ=255) tgtACGTCTACTCGCCAAGTCAATGTGAGCGAAGTTAACGCGGCAACAGGTATTGTACGGTTAGTTTATGACCAGGCTTTATTGCACCATGCCCATAc < 2:2122198/98‑1 (MQ=255) tACGGTTACTCGCCAAGCCCATGTGAGCGAAGTTGACGCGGCAACAGGTATTGTACGGTTAGTTTATGACTAGGCTTTTTTGCAGCATGCCCATACCGAt > 2:1497119/1‑100 (MQ=255) tACGGTTACTCGCCAAGCCCATGTGAGCGAAGTTGACGCGGCAACAGGTATTGTACGGTTAGTTTATGACCAGGCTTTTTTGCAGCATGCCCATACCGAt < 1:1023858/100‑1 (MQ=255) tACGGTTACTCGCCAAGCCCATGTGAGCGAAGTTGACGCGGCAACAGGTATTGTACGGTTAGTTTATGACCAGGCTTTTTTGCAGCATGCCCATACCGAt > 2:444090/1‑100 (MQ=255) aCGGTTACTCGCCAAGCCCATGTGAGCGAAGTTGACGCGGCAACAGGTATTGTACGGTTAGTTTATGACTAGGCTTTTTTGCAGCATGCCCATACCGATc > 2:602205/1‑100 (MQ=255) aCGGTTACTCGCCAAGCCCATGTGAGCGAAGTTGACGCGGCAACAGGTATTGTACGGTTAGTTTATGACTAGGCTTTTTTGCAGCATGCCCATACCGATc < 1:2708140/100‑1 (MQ=255) aCGGTTACTCGCCAAGCCCATGTGAGCGAAGTTGACGCGGCAACAGGTATTGTACGGTTAGTTTATGACCAGGCTTTTTTGCAGCATGCCCATACCGATc > 2:4065205/1‑100 (MQ=255) aCGGTTACTCGCCAAGCCCATGTGAGCGAAGTTGACGCGGCAACAGGTATTGTACGGTTAGTTTATGACCAGGCTTTTTTGCAGCATGCCCATACCGATc > 1:4133771/1‑100 (MQ=255) cGGTTACTCGCCAAGCCCATGTGAGCGAAGTTGACGCGGCAACAGGTATTGTACGGTTAGTTTATGACCAGGCTTTTTTGCAGCATGCCCATACCGATCg < 1:3660857/100‑1 (MQ=255) cGGTTACTCGCCAAGCCCATGTGAGCGAAGTTGACGCGGCAACAGGTATTGTACGGTTAGTTTATGACCAGGCTTTTTTGCAGCATGCCCATACCGATCg > 1:110182/1‑100 (MQ=255) gTTACTCGCCAAGCCCATGTGAGCGAAGTTGACGCGGCAACAGGTATTGTACGGTTAGTTTATGACCAGGCTTTTTTGCAGCATGCCCATACCGATCGtt < 2:816356/100‑1 (MQ=255) ttACTCGCCAAGCCCATGTGAGCGAAGTTGACGATGCAATAGGTATTGTACGGTTAGTTTATGACTAGGTTTTTTTGCAGCATGCCCATACCGATCGTTa < 2:1914524/100‑1 (MQ=255) aCTCGCCAAGCCCATGTGAGCGAAGTTGACGCGGCAACAGGTATTGTACGGTTAGTTTATGACTAGGCTTTTTTGCAGCATGCCCATACCGATCGTTATg < 2:516152/100‑1 (MQ=255) cTCGCCAAGCCCATGTGAGCGAAGTTGACGCGGCAACAGGTATTGTACGGTTAGTTTATGACTAGGCTTTTTTGCAGCTTACCTATACCGATCGTTAttt > 2:1801585/1‑98 (MQ=255) cTCGCCAAGCCCATGTGAGCGAAGTTGACGCGGCAACAGGTATTGTACGGTTAGTTTATGACTAGGCTTTTTTGCAGCATGCCCATACCGATCGTTATGt > 1:3090407/1‑100 (MQ=255) cTCGCCAAGCCCATGTGAGCGAAGTTGACGCGGCAACAGGTATTGTACGGTTAGTTTATGACTAGGCTTTTTTGCAGCATACCCATACCGATCGTTATGt > 2:3180860/1‑100 (MQ=255) cTCGCCAAGCCCATGTGAGCGAAGTTCACGCGGCAACAGGTATTGTACGGTTAGTTTATGACTAGGCTTTTTTGCAGCATGCCCATACCGATCGTTATGt > 1:2516276/1‑100 (MQ=255) tCGCCAAGCCCATGTGAGCGAAGTTGACGCGGCAACAGGTATTGTACGGTTAGTTTATGACCAGGCTTTTTTGCAGCATGCCCATACCGATCGTTATGTc < 1:4065232/100‑1 (MQ=255) cGCCAAGCCCATGTGAGCGAAGTTGACGCGGCAACAGGTATTGTACGGTTAGTTTATGACCAGGCTTTTTTGCAGCATGCCCATACCGATCGTTATGTCa > 2:3016732/1‑100 (MQ=255) gCCAAGCCCATGTGAGCGAAGTTGACGCGGCAACAGGTATTGTACGGTTAGTTTATGACTAGGCTTTTTTGCAGCATGCCCATACCGATCGTTATGTCAg > 1:3886786/1‑100 (MQ=255) gCCCATGTGAGCGAAGTTGACGCGGCAACAGGTATTGTACGGTTAGTTTATGACCAGGCTTTTTTGCAGCATGCCCATACCGATCGTTATGTCAGTcgcg > 2:1463475/1‑100 (MQ=255) cccATGTGAGCGAAGTTGACGCGGCAACAGGTATTGTACGGTTAGTTTATGACTAGGCTTTTTTGCAGCATGCCCATACCGATCGTTATGTCAGTCGCgg < 1:2160963/100‑1 (MQ=255) ccATGTGAGCGAAGTTGACGCGGCAACAGGTATTGTACGGTTAGTTTATGACCAGGCTTTTTTGCAGCATGCCCATACCGATCGTTATGTCAGTCGCggg > 1:968263/1‑100 (MQ=255) ccATGTGAGCGAAGTTGACGCGGCAACAGGTATTGTACGGTTAGTTTATGACCAGGCTTTTTTGCAGCATGCCCATACCGATCGTTATGTCAGTCGCggg < 2:244160/100‑1 (MQ=255) ccATGTGAGCGAAGTTGACGCGGCAACAGGTATTGTACGGTTAGTTTATGACCAGGCTTTTTTGCAGCATGCCCATACCGATCGTTATGTCAGTCGCggg > 2:2466886/1‑100 (MQ=255) ccATGTGAGCGAAGTTGACGCGGCAACAGGTATTGTACGGTTAGTTTATGACCAGGCTTTTTTGCAGCATGCCCATACCGATCGTTATGTCAGTCGCggg > 2:412452/1‑100 (MQ=255) cATGTGAGCGAAGTTGACGCGGCAACAGGTATTGTACGGTTAGTTTATGACCAGGCTTTTTTGCAGCATGCCCATACCGATCGTTATGTCAGTCGCgggn < 2:3220372/100‑2 (MQ=255) cATGTGAGCGAAGTTGACGCGGCAACAGGTATTGTACGGTTAGTTTATGACCAGGCTTTTTTGCAGCATGCCCATACCGATCGTTATGTCAGTCGCGGGa < 2:3220436/100‑1 (MQ=255) aTGTGAGCGAAGTTGACGCGGCAACAGGTATTGTACGGTTAGTTTATGACTAGGCTTTTTTGCAGCATGCCCATACCGATCGTTATGTCAGTCGCGGGAt > 1:2205616/1‑100 (MQ=255) aTGTGAGCGAAGTTGACGCGGCAACAGGTATTGTACGGTTAGTTTATGACTAGGCTTTTTTGCAGCATGCCCATACCGATCGTTATGTCAGTCGCGGGAt > 1:2977806/1‑100 (MQ=255) gAGCGAAGTTGACGCGGCAACAGGTATTGTACGGTTAGTTTATGACTAGGCTTTTTTGCAGCATGCCCATACCGATCGTTATGTCAGTCGCGGGATCGcc < 1:340331/100‑1 (MQ=255) gAGCGAAGTTGACGCGGCAACAGGTATTGTACGGTTAGTTTATGACCAGGCTTTTTTGCAGCATGCCCATACCGATCGTTATGTCAGTCGCGGGATCGcc < 1:2363159/100‑1 (MQ=255) gAGCGAAGTTGACGCGGCAACAGGTATTGTACGGTTAGTTTATGACCAGGCTTTTTCGCAGCATGCCCATACCGATCGTTATGTCAGTCGCGAAATCGcc < 2:1856498/100‑1 (MQ=255) aGCGAAGTTGACGCGGCAACAGGTATTGTACGGTTAGTTTATGACCAGGCTTTTTTGCAGCATGCCCATACCGATCGTTATGTCAGTCGCGGGATCGCCg < 1:2675562/100‑1 (MQ=255) gCGAAGTTGACGCGGCAACAGGTATTGTACGGTTAGTTTAGGATCCGGCTTTTTTGCAGCATGCCCATACCGATCGTTATGTCAGTCGCGGGATCGCCGa < 2:2641208/100‑1 (MQ=255) gAAGTTGACGCGGCAACAGGTATTGTACGGTTAGTTTATGACTAGGCTTTTTTGCAGCATGCCCATACCGATCGTTATGTCAGTCGCGGGATCGCCGATc < 1:3733657/100‑1 (MQ=255) aaGTTGACGCGGCAACAGGTATTGTACGGTTAGTTTATGACTAGGCTTTTTTGCAGCATGCCCATCCCGATCGTTATGTCAGTCGCGGGATCGCCGATcg < 1:2155066/100‑1 (MQ=255) gTTGACGCGGCAACAGGTATTGTACGGTTAGTTTATGACTAGGCTTTTTTGCAGCATGCCCATACCGATCGTTATGTCAGTCGCGGGATCGCCGATcgcg > 1:485298/1‑100 (MQ=255) gTTGACGCGGCAACAGGTATTGTACGGTTAGTTTATGACCAGGCTTTTTTGCAGCATGCCCATACCGATCGTTATGTCAGTCGCGGGATCGCCGATcgcg < 1:3702981/100‑1 (MQ=255) gTTGACGCGGCAACAGGTATTGTACGGTTAGTTTATGACCAGGCTTTTTTGCAGCATGCCCATACCGATCGTTATGTCAGTCGCGGGATCGCCGATcgcg > 1:3660255/1‑100 (MQ=255) tttaCGCGGCAACAGGTATTGTACGGTTAGTTTATGACTAGGCTTTTTTGCAGCATGCCCATACCGATCGTTATGTCAGTCGCGGGATCGCCGATCgcgc < 2:2459598/97‑1 (MQ=255) tGACGCGGCAACAGGTATTGTACGGTTAGTTTATGACTAGGCTTTTTTGCAGCATGCCCATACCGATCGTTATGTCAGTCGCGGGATCGCCGATCGCGCa > 1:1967322/1‑100 (MQ=255) gACGCGGCAACAGGTATTGTACGGTTAGTTTATGACTAGGCTTTTTTGCAGCATGCCCATACCGATCGTTATGTCAGTCGCGGGATCGCCGATCGCGCAt > 2:2352895/1‑100 (MQ=255) gACGCGGCAACAGGTATTGTACGGTTAGTTTATGACTAGGCTTTTTTGCAGCATGCCCATACCGATCGTTATGTCAGTCGCGCGATCGGCGATCccgcg < 2:3510401/99‑2 (MQ=255) aCGCGGCAACAGGTATTGTACGGTTAGTTTATGACTAGGCTTTTTTGCAGCATGCCCATACCGATCGTTATGTCAGTCGCGGGATCGCCGATCGCGCATg < 1:3304447/100‑1 (MQ=255) aCGCGGCAACAGGTATTGTACGGTTAGTTTATGACTAGGCTTTTTTGCAGCATGCCCATACCGATCGTTATGTCAGTCGCGCGATCGGCGATCccgcgac < 2:636454/100‑4 (MQ=255) aCGCGGCAACAGGTAGTGTACGGTTAGTTTATGACCAGGCTTTTTTGCAGCATGCCCATACCGATCGTTATGTCAGTCGCGGGATCGCCGATCGCGCAt < 2:2353830/99‑1 (MQ=255) cgcgGCAACAGGTATTGTACGGTTAGTTTATGACTAGGCTTTTTTGCAGCATGCCCATACCGATCGTTATGTCAGTCGCGGGATCGCCGATCGCGCATGc > 2:1728080/1‑100 (MQ=255) cgcgGCAACAGGTATTGTACGGTTAGTTTATGACTAGGCTTTTTTGCAGCATGCCCATACCGATCGTTATGTCAGTCGCGGGATCGCCGATCGCGCATGc > 1:47204/1‑100 (MQ=255) cgcgGCAACAGGTATTGTACGGTTAGTTTATGACTAGGCTTTTTTGCAGCATGCCCATACCGATCGTTATGTCAGTCGCGCGATCGGCGATCccgcgac < 2:2965079/99‑4 (MQ=255) cgcgGCAACAGGTAGTGTACGGTTAGTTTATGACTAGGCTTTTTTGCAGCATGCCCATACCGATCGTTATGTCAGTCGCGCGATCGGCGATCccgcgact < 2:4133935/100‑5 (MQ=255) cgGCAACAGGTATTGTACGGTTAGTTTATGACTAGGCTTTTTTGCAGCATGCCCATACCGATCGTTATGTCAGTCGCGGGATCGCCGATCGCGCATGCca > 1:2142658/1‑100 (MQ=255) ggCAACAGGTATTGTACGGTTAGTTTATGACCAGGCTTTTTTGCAGCATGCCCATACCGATCGTTATGTCAGTCGCGGGATCGCCGATCGCGCATGCcag < 1:1552403/100‑1 (MQ=255) ggCAACAGGTATTGTACGGTTAGTTTATGACCAGGCTTTTTTGCAGCATGCCCATACCGATCGTTATGTCAGTCGCGGGATCGCCGATCGCGCATGCcag < 1:3205805/100‑1 (MQ=255) gCAACAGGTATTGTACGGTTAGTTTATGACTAGGCTTTTTTGCAGCATGCCCATACCGATCGTTATGTCAGTCGCGGGATCGCCGATCGCGCATGCcagc > 1:3478351/1‑100 (MQ=255) cAACAGGTATTGTACGGTTAGTTTATGACTAGGCTTTTTTGCAGCATGCCCATACCGATCGTTATGTCAGTCGCGGGATCGCCGATCGCGCATGCcagca > 1:1987153/1‑100 (MQ=255) cAACAGGTATTGTACGGTTAGTTTATGACCAGGCTTTTTTGCAGAATGCCCATACCGATCGTTATGTCAGTCGCGGGATCGCCGATCGCTCATGCcagca > 2:1052658/1‑100 (MQ=255) cAGGTATTGTACGGTTAGTTTATGACTAGGCTTTTTTGCAGCATGCCCATACCGATCGTTATGTCAGTCGCGGGATCGCCGATCGCGCATGCCAGCAGGa > 1:525965/1‑100 (MQ=255) cAGGTATTGTACGGTTAGTTTATGACTAGGCTTTTTTGCAGCATGCCCATACCGATCGTTATGTCAGTCGCGGGATCGCCGATCGCGCATGCCAGCAGGa > 2:719947/1‑100 (MQ=255) ggTATTGTACGGTTAGTTTATGACTAGGCTTTTTTGCAGCATGCCCATACCGATCGTTATGTCAGTCGCGGGATCGCCGATCGCGCATGCCAGCAGGAAg > 1:1498923/1‑100 (MQ=255) ggTATTGTACGGTTAGTTTATGACTAGGCTTTTTTGCAGCATGCCCATACCGATCGTTATGTCAGTCGCGGGATCGCCGATCGCGCATGCCAGCAGGAAg > 1:759668/1‑100 (MQ=255) ggTATTGTACGGTTAGTTTATGACTAGGCTTTTTTGCAGCATGCCCATACCGATCGTTATGTCAGTCGCGGGATCGCCGATCGCGCATGCCAGCAGGAAg < 2:3493601/100‑1 (MQ=255) ggTATTGTACGGTTAGTTTATGACCAGGCTTTTTTGCAGCATGCCCATACCGATCGTTATGTCAGTCGCGGGATCGCCGATCGCGCATGCCAGCAGGAAg > 1:1876881/1‑100 (MQ=255) ggTATTGTACGGTTAGTTTATGACCAGGCTTTTTTGCAGCATGCCCATACCGATCGTTATGTCAGTCGCGGGATCGCCGATCGCGCATGCCAGCAGGAAg > 2:3107197/1‑100 (MQ=255) gTATTGTACGGTTAGTTTATGACCAGGCTTTTTTGCAGCATGCCCATACCGATCGTTATGTCAGTCGCGGGATCGCCGATCGCGCATGCCAGCAGGAAgg < 1:3419990/100‑1 (MQ=255) aTTGTACGGTTAGTTTATGACTAGGCTTTTTTGCAGCATGCCCATACCGATCGTTATGTCAGTCGCGGGATCGCCGATCGCGCATGCCAGCAGGAAGGCt > 1:2127003/1‑100 (MQ=255) aTTGTACGGTTAGTTTATGACCAGGCTTTTTTGCAGCATGCCCATACCGATCGTTATGTCAGTCGCGGGATCGCCGATCGCGCATGCCATCAGGAAgg > 2:2605684/1‑98 (MQ=255) tGTACGGTTAGTTTATGACTAGGCTTTTTTGCAGCATGCCCATACCGATCGTTATGTCAGTCGCGGGATCGCCGATCGCGCATGCCAGCAGGAAGGCtat > 2:1303298/1‑100 (MQ=255) aCGGTTAGTTTATGACTAGGCTTTTTTTTTGCTTTTTTATACCGATCGTTATGTCCGTCGTCTGATCTCCGATCGCGCATGCCAGCAGGAAGGCTacac > 2:1882665/1‑99 (MQ=255) gTTAGTTTATGACTAGGCTTTTTTGCAGCATGCCCATACCGATCGTTATGTCAGTCGCGGGATCGCCGATCGCGCATGCCAGCAGGAAGGCTATACCCAc > 2:1305730/1‑100 (MQ=255) gTTAGTTTATGACTAGGCTTTTTTGCAGCATGCCCATACCGATCGTTATGTCAGTCGCGGGATCGCCGATCGCGCATGCCAGCAGGAAGGCTATACCCAc > 1:964282/1‑100 (MQ=255) tATGACTAGGCTTTTTTGCAGCATGCCCATACCGATCGTTATGTCAGTCGCGGGATCGCCGATCGCGCATGCCAGCAGGAAGGCTATACCCACGCGGTcc < 1:1704541/100‑1 (MQ=255) gACTAGGCTTTTTTGCAGCATGCCCATACCGATCGTTATGTCAGTCGCGGGATCGCCGATCGCGCATGCCAGCAGGAAGGCTATACCCACGCGGTccc > 2:4042801/1‑98 (MQ=255) gACCAGGCTTTTTAGCAGCATGCCCATACCGATCGTTATGTCAGTCGCGGGATCGCCGATCGCGCATGCCAGCAGGAAGGCTATACCCACGCGGTCCCCt > 1:2798291/1‑100 (MQ=255) cAGGCTTTTTTGCAGCATGCCCATACCGATCGTTATGTCAGTCGCGGGATCGCCGATCGCGCATGCCAGCAGGAAGGCTATACCCACGCGGTCCCCTTTg > 2:352695/1‑100 (MQ=255) cAGGCTTTTTTGCAGCATGCCCATACCGATCGTTATGTCAGTCGCGGGATCGCCGATCGCGCATGCCAGCAGGAAGGCTATACCCACGCGGTCCCCTTTg < 2:4022601/100‑1 (MQ=255) | TCTTTCATTAATAACGCTGGCGGGGTGTACGGTTACTCGCCAAGCCCATGTGAGCGAAGTTGACGCGGCAACAGGTATTGTACGGTTAGTTTATGACCAGGCTTTTTTGCAGCATGCCCATACCGATCGTTATGTCAGTCGCGGGATCGCCGATCGCGCATGCCAGCAGGAAGGCTATACCCACGCGGTCCCCTTTG > NC_000913/1988242‑1988438 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |