| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 318,690 | A→G | 54.2% | S438P (TCA→CCA) | rclA ← | reactive chlorine stress species (RCS) resistance protein; pyridine nucleotide‑dependent disulfide oxidoreductase family |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 318,690 | 0 | A | G | 54.2% | 49.4 / 212.8 | 168 | S438P (TCA→CCA) | rclA | reactive chlorine stress species (RCS) resistance protein; pyridine nucleotide‑dependent disulfide oxidoreductase family |
| Reads supporting (aligned to +/- strand): ref base A (40/37); new base G (47/44); total (87/81) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.73e-01 | |||||||||||
Only 100 of 177 total aligned reads displayed.
TAAGAAGTTATAGAGTAACAGAGAATTAATAAGATTCTTTTCTCTGAGACGCCAGAATATTTGTTCTGGCGTCTGATTTTGAGTTTATTTGACTAATGAAAATAGATCATTGAGTGATTCGCTCATCGACGGATGAGTAAATATCTGATCGCGTAATATGCTATAAGGCAGCCCGGCATCCATCACCATTTTCACT > NC_000913/318592‑318787 | tAAGAAGTTATAGAGTAACAGAGAATTAATAAGATTCTTTTCTCTGAGACGCCAGAATATTTGTTCTGGCGTCTGATTTTGAGTTTATTTGACTAATGaa < 1:1386455/100‑1 (MQ=255) aagaagTTATAGAGTAACAGAGAATTAATAAGATTCTTTTCTCTGAGACGCCAGAATATTTGTTCTGGCGTCTGATTTTGAGTTTATTTGACTAATGgaa < 1:2465352/100‑1 (MQ=255) aagaagTTATAGAGTAACAGAGAATTAATAAGATTCTTTTCTCTGAGACGCCAGAATATTTGTTCTGGCGTCTGATTTTGAGTTTATTTGACTAATGaaa > 1:897258/1‑100 (MQ=255) aagaagTTATAGAGTAACAGAGAATTAATAAGATTCTTTTCTCTGAGACGCCAGAATATTTGTTATGGCGTCTGATTTTGAGTTTATTTGACTAATGgaa > 1:1753899/1‑100 (MQ=255) agaagTTATAGAGTAACAGAGAATTAATAAGATTCTTTTCTCTGAGACGCAAGAATATTTGTTCTGGCGTCTGATTTTGAGTTTATTTGACTAATGaaaa > 2:505030/1‑100 (MQ=255) agaagTTATAGAGTAACAGAGAATTAATAAGATTCTTTTCTCTGAGACGACAGAATATTTGTTCTGGCGTCTGATTTTGAGTTTATTTGACTAATGgaaa > 2:1584284/1‑100 (MQ=255) tctgTTATAGAGTAACAGAGAATTAATAAGATTCTTTTCTCTGAGACGCCAGAATATTTGTTCTGGCGTCTGATTTTGAGTTTATTTGACTAATGGAAAt < 1:3386499/97‑1 (MQ=255) gaagTTATAGAGTAACAGAGAATTAATAAGATTCTTTTCTCTGAGACGCCAGAATATTTGTTCTGGCGTCTGATTTTGAGTTTATTTGACTAATGGAAAt < 2:460261/100‑1 (MQ=255) gaagTTATAGAGTAACAGAGAATTAATAAGATTCTTTTCTCTGAGACGCCAGAATATTTGTTCTGGCGTCTGATTTTGAGTTTATTTGACTAATGAAAAt < 2:1502764/100‑1 (MQ=255) aagTTATAGAGTAACAGAGAATTAATAAGATTCTTTTCTCTGAGACGCCAGAATATTTGTTCTGGCGTCTGATTTTGAGTTTATTTGACTAATGAAAATa < 1:135653/100‑1 (MQ=255) gTTATAGAGTAACAGAGAATTAATAAGATTCTTTTCTCTGAGACGCCAGAATATTTGTTCTGGCGTCTGATTTTGAGTTTATTTGACTAATGGAAATAGa < 2:1961694/100‑1 (MQ=255) gTTATAGAGTAACAGAGAATTAATAAGATTCTTTTCTCTGAGACGCCAGAATATTTGTTCTGGCGTCTGACTTTGAGTTTATTTGACTAATGGAAATAGa > 1:763952/1‑100 (MQ=255) gTTATAGAGTAACAGAGAATTAATAAGATTCTTTTCTCTGAGACGCCAGAATATTTGTTCTGGAGTCTGATTTTGAGTTTATTTGACTAATGAAAATAg < 2:3961012/99‑1 (MQ=255) ttATAGAGTAACAGAGAATTAATAAGATTCTTTTCTCTGAGACGCCAGAATATTTGTTCTGGCGTCTGATTTTGAGTTTATTTGACTAATGGAAATAGa > 2:3415607/1‑99 (MQ=255) ttATAGAGTAACAGAGAATTAATAAGATTCTTTTCTCTGAGACGCCAGAATATTTGTTCTGGCGTCTGATTTTGAGTTTATTTGACTAATGAAAATAGAt > 1:916086/1‑100 (MQ=255) ttATAGAGTAACAGAGAATTAATAAGATTCTTTTCTCTGAGACGCCAGAATATTTGTTCTGGCGTCTGATTTTGAGTTTATTTGACTAATGAAAATAGAt < 2:3062976/100‑1 (MQ=255) tataGAGTAACAGAGAATTAATAAGATTCTTTTTTCTGTGACTCCTGAATATTTTTTCTGGAGTCTGATTTTGAGTTTATTTTACTAATGGAAATAGATc < 2:696574/100‑1 (MQ=255) tataGAGTAACAGAGAATTAATAAGATTCTTTTCTCTGAGACGCCAGAATATTTGTTCTGGCGTCTGATTTTGAGTTTATTTGACTAATGGAAATAGATc < 2:1765590/100‑1 (MQ=255) tataGAGTAACAGAGAATTAATAAGATTCTTTTCTCTGAGACGCCAGAATATTTGTTCTGGCGTCTGATTTTGAGTTTATTTGACTAATGGAAATAGATc < 2:834243/100‑1 (MQ=255) tataGAGTAACAGAGAATTAATAAGATTCTTTTCTCTGAGACGCCAGAATATTTGTTCTGGCGTCTGATTTTGAGTTTATTTGACTAATGGAAATAGATc > 2:253138/1‑100 (MQ=255) taGAGTAACAGAGAATTAATAAGATTCTTTTCTCTGAGACGCCAGAATATTTGTTCTGGCGTCTGATTTTGAGTTTATTTGACTAATGGAAATAGATCan < 2:3155050/100‑2 (MQ=255) agagTAACAGGGAATTAATAAGATTCTTTTCTCTGAGACGCCAGAATATTTGTTCTGGCGTCTGATTTTGAGTTTATTTGACTAATGAAAATAGATCAtt > 1:609222/1‑100 (MQ=255) agagTAACAGAGAATTAATAAGATTCTTTTCTCTGAGACGCCAGAATATTTGTTCTGGCGTCTGATTTTGAGTTTATTTGACTAATGGAAATAGATCAtt > 2:3391443/1‑100 (MQ=255) gagTAACAGAGAATTAATAAGATTCTTTTCTCTGAGACGCCAGAATATTTGTTCTGGCGTCTGATTTTGAGTTTATTTGACTAATGGAAATAGATCATTg > 2:2104136/1‑100 (MQ=255) gTAACAGAGAATTAATAAGATTCTTTTCTCTGAGACGCCAGAATATTTGTTCTGGCGTCTGATTTTGAGTTTATTTGACTAATGAAAATAGATCATTGAg > 2:1114976/1‑100 (MQ=255) gTAACAGAGAATTAATAAGATTCTTTTCTCTGAGACGCCAGAATATTTGTTCTGGCGTCTGATTTTGAGTTTATTTGACTAATGAAAATAGATCATTGAg < 1:819878/100‑1 (MQ=255) cAGAGAATTAATAAGATTCTTTTCTCTGAGACGCCAGAATATTTGTTCTGGCGTCTGATTTTGAGTTTATTTGACTAATGGAAATAGATCATTGAGTGAt > 2:609122/1‑100 (MQ=255) cAGAGAATTAATAAGATTCTTTTCTCTGAGACGCCAGAATATTTGTTCTGGCGTCTGATTTTGAGTTTATTTGACTAATGAAAATAGATCATTGAGTGAt > 1:2676164/1‑100 (MQ=255) agagAATTAATAAGATTCTTTTCTCTGAGACGCCAGAATATTTGTTCTGGCGTCTGATTTTGAGTTTATTTGACTAATGGAAATAGATCATTGAGTGAtt < 1:1077880/100‑1 (MQ=255) gagaATTAATAAGATTCTTTTCTCTGAGACGCCAGAATATTTGTTCTGGCGTTTGATTTTGGGTTTATTTGACTAATGAAGATAGATCATTGAGTGATTc < 2:1501044/100‑1 (MQ=255) gagaATTAATAAGATTCTTTTCTCTGAGACGCCAGAATATTTGTTCTGGCGTCTGATTTTGAGTTTATTTGACTAATGGAAATAGATCATTGAGTGa > 2:2593252/1‑97 (MQ=255) gagaATTAATAAGATTCTTTTCTCTGAGACGCCAGAATATTTGTTCTGGCGTCTGATTTTGAGTTTATTTGACTAATGGAAATAGATCATTGAGTGATTc > 2:1338892/1‑100 (MQ=255) gaATTAATAAGATTCTTTTCTCTGAGACGCCAGAATATTTGTTCTGGCGTCTGATTTTGAGTTTATTTGACTAATGGAAATAGATCATTGAGTGATTCGc < 1:2143178/100‑1 (MQ=255) gaATTAATAAGATTCTTTTCTCTGAGACGCCAGAATATTTGTTCTGGCGTCTGATTTTGAGTTTATTTGACTAATGAAAATAGATCATTGAGTGATTCGc > 1:2264340/1‑100 (MQ=255) ataaGATTCTTTTCTCTGAGACGCCAGAATATTTGTTCTGGCGTCTGATTTTGAGTTTATTTGACTAATGGAAATAGATCATTGAGTGATTCGCTCATCg < 2:2926017/100‑1 (MQ=255) taaGATTCTTTTCTCTGAGACGCCAGAATATTTGTTCTGGCGTCTGATTTTGCGTTTATTTGACTAATGAAAATAGATCATTGAGTGATTCGCTCATCg > 2:3132301/1‑99 (MQ=255) taaGATTCTTTTCTCTGAGACGCCAGAATATTTGTTCTGGCGTCTGATTTTGAGTTTATTTGACTAATGGAAATAGATCATTGAGTGATTCGCTCATCGa > 1:1553490/1‑100 (MQ=255) gATTCTTTTCTCTGAGACGCCAGAATATTTGTTCTGGCGTCTGATTTTGAGTTTATTTGACTAATGGAAATAGATCATTGAGTGATTCGCTCATCGACgg > 1:3380860/1‑100 (MQ=255) gATTCTTTTCTCTGAGACGCCAGAATATTTGTTCTGGCGTCTGATTTTGAGTTTATTTGACTAATGAAAATAGATCATTGAGTGATTCGCTCATCGACgg > 1:3625612/1‑100 (MQ=255) ttCTTTTCTCTGAGACGCCAGAATATTTGTTCTGGCGTCTGATTTTGAGTTTATTTGACTAATGAAAATAGATCATTGAGTGATTCGCTCATCGACGGAt > 2:36488/1‑100 (MQ=255) tCTTTTCTCTGAGACGCCAGAATATTTGTTCTGGCGTCTGATTTTGAGTTTATTTGACTAATGGAAATAGATCATTGAGTGATTCGCTCATCGACGGATg < 1:2543072/100‑1 (MQ=255) tCTTTTCTCTGAGACGCCAGAATATTTGTTCTGGCGTCTGATTTTGAGTTTATTTGACTAATGAAAATAGATCATTGAGTGATTCGCTCATCGACGGATg < 2:2949613/100‑1 (MQ=255) cTTTTCTCTGAGACGCCAGAATATTTGTTCTGGCGTCTGATTTTGAGTTTATTTGACTAATGGAAATAGATCATTGAGTGATTCGCTCATCGACGGATGa > 1:170443/1‑100 (MQ=255) cTTTTCTCTGAGACGCCAGAATATTTGTTCTGGCGTCTGATTTTGAGTTTATTTGACTAATGAAAATAGATCATTGAGTGATTCGCTCATCGACGGATGa > 2:1948424/1‑100 (MQ=255) ttttCTCTGAGACGCCAGAATATTTGTTCTGGCGTCTGATTTTGAGTTTATTTGACTAATGGAAATAGATCATTGAGTGATTCGCTCATCGACGGATGAg < 2:2281719/100‑1 (MQ=255) ctcaaaatcagaCGCCAGAACAAATATTCTGGCGTCTGATTTTGAGTTTATTTGACTAATGGAAATAGATCATTGAGTGATTCGCTCATCGACGGATGAg > 2:1024460/10‑100 (MQ=21) tcaaaatcagaCGCCAGAACAAATATTCTGGCGTCTGATTTTGAGTTTATTTGACTAATGGAAATAGATCATTGAGTGATTCGCTCATCGACGGATGAGt > 1:5026/9‑100 (MQ=21) ttCTCTGAGACGCCAGAATATTTGTTCTGGCGTCTGATTTTGAGTTTATTTGACTAATGAAAATAGATCATTGAGTGATTCGCTCATCGACGGATGAGTa < 1:2028923/100‑1 (MQ=255) ctctGAGACGCCAGAATATTTGTTCTGGCGTCTGATTTTGAGTTTATTTGACTAATGGAAATAGAACATTGAGTGATTCGCTCATCGACGGATGAGTaaa > 1:2422504/1‑100 (MQ=255) ctctGAGACGCCAGAATATTTGTTCTGGCGTCTGATTTTGAGTTTATTTGACTAATGAAAATAGATCATTGAGTGATTCGCTCATCGACGGATGAGTaaa > 2:742962/1‑100 (MQ=255) aaatcagaCGCCAGAACAAATATTCTGGCGTCTGATTTTGAGTTTATTTGACTAATGGAAATAGATCATTGAGTGATTCGCTCATCGACGGATGAGTaaa > 2:3567564/6‑100 (MQ=25) atcagccGCCAGAACAAATATTCTGGCGTCTGATTTTGAGTTTATTTGACTAATGGAAATAGATCATTGAGTGATTCGCTCATCGACGGATGAGTAAata > 2:2819329/7‑100 (MQ=37) atcagaCGCCAGAACAAATATTCTGGCGTCTGATTTTGAGTTTATTTGACTAATGGAAATAGATCATTGAGTGATTCGCTCATCGACGGATGAGTAAata > 1:3312131/4‑100 (MQ=37) tGAGACGCCAGAATATTTGTTCTGGCGTCTGATTTTGAGTTTATTTGACTAATGGAAATAGATCATTGAGTGATTCGCTCATCGCCGGATGAGTAAatat > 1:4068765/1‑100 (MQ=255) cagaCGCCAGAACAAATATTCTGGCGTCTGATTTTGAGTTTATTTGACTAATGGAAATAGATCATTGAGTGATTCGCTCATCGACGGATGAGTAAATATc > 1:2438297/2‑100 (MQ=37) agaCGCCAGAATATTTGTTCTAGCGTCTGATTTTGAGTTTATTTGACTAATGGAAATAGATCATTGAGTGATTCGCTCATCGACGGATGAGTAAATATCt < 2:3796075/100‑1 (MQ=255) agaCGCCAGAACAAATATTCTGGCGTCTGATTTTGAGTTTATTTGACTAATGAAAATAGATCCTTGAGTGATTCGCTCATCGACGGATGCGTAAATATCt > 2:3496210/1‑100 (MQ=38) cGCCAGAATATTTGTTCTGGCGTCTGATTTTGAGTTTATTTGACTAATGAAAATAGATCATTGAGTGATTCGCTCATCGACGGATGAGTAAATATCTGAt > 1:1171558/1‑100 (MQ=255) aGAATATTTGTTCTGGCGTCTGATTTTGAGTTTATTTGACTAATGAAAATAGATCATTGAGTGATTCGCTCATCGACGGATGAGTAAATATCTGATcgcg < 1:1962875/100‑1 (MQ=255) aaTATTTGTTCTGGCGTCTGATTTTGAGTTTATTTGACTAATGGAAATAGATCATTGAGTGATTCGCTCATCGACGGATGAGTAAATATCTGATCGCGTa < 1:58764/100‑1 (MQ=255) atatTTGTTCTGGCGTCTGATTTTGAGTTTATTTGACTAATGAAAATAGATCATTGAGTGATTCGCTCATCGACGGATGAGTAAATATCTGATCGCGTaa < 2:3370776/100‑1 (MQ=255) atTTGTTCTGGCGTCTGATTTTGAGTTTATTTGACTAATGAAAATAGATCATTGAGTGATTCGCTCATCGACGGATGAGTAAATATCTGATCGCGTAata > 2:2235581/1‑100 (MQ=255) tGTTCTGGCGTCTGATTTTGAGTTTATTTGACTAATGGAAATAGATCATTGAGTGATTCGCTCATCGACGGATGAGTAAATATCTGCTCGCGTAatatcc < 1:2800606/100‑3 (MQ=255) tGTTCTGGCGTCTGATTTTGAGTTTATTTGACTAATGGAAATAGATCATTGAGTGATTCGCTCATCGACGGATGAGTAAATATCTGATCGCGTAATATGc < 2:3565895/100‑1 (MQ=255) tGTTCTGGCGTCTGATTTTGAGTTTATTTGACTAATGGAAATAGATCATTGAGTGATTCGCTCATCGACGGATGAGTAAATATCTGATCGCGTAATATGc > 2:2262013/1‑100 (MQ=255) tGTTCTGGCGTCTGATTTTGAGTTTATTTGACTAATGAAAATAGATCATTGAGTGATTCGCTCATCGACGGATGAGTAAATATCTGATCGCGTAATATGc < 2:327469/100‑1 (MQ=255) gTTCTGGCGTCTGATTTTGAGTTTATTTGACTAATGAAAATAGATCATTGAGTGATTCGCTCATCGACGGATGAGTAAATATCTGATCGCGTAATATGCt < 2:1092942/100‑1 (MQ=255) cTGGCGTCTGATTTTGAGTTTATTTGACTAATGGAAATAGATCATTGAGTGATTCGCTCATCGACGGATGAGTAAATATCTGATCGCGTAATATGCtat < 2:2700707/99‑1 (MQ=255) ggCGTCTGATTTTGAGTTTATTTGACTAATGGAAATAGATCATTGAGTGATTCGCTCATCGACGGATGAGTAAATATCTGATCGCGTAATATGCTATAAg < 1:2992702/100‑1 (MQ=255) gCGTCTGATTTTGAGTTTATTTGACTAATGAAAATAGATCATTGAGTGATTTGCTCTTCGACGGATGAGGAAATATCTGATCGTGTAATATGCTATAAgg > 2:2591540/1‑100 (MQ=255) gCGTCTGATTTTGAGTATGTTTGACTAATGGAAATAGATCATTGAGTGATTCGCTCATCGAGGAATGAGTAAATATCTGATCGCGTAAGATGCTATAAgg < 2:988162/100‑1 (MQ=255) cGTCTGATTTTGAGTTTATTTGACTAATGAAAATAGATCATTGAGTGATTCGCTCATCGACGGATGAGTAAATATCTGATCGCGTAATATGCTATAAGGc < 1:1109176/100‑1 (MQ=255) gTCTGATTTTGAGTTTATTTGACTAATGGAAATAGATCATTGAGTGATTCGCTCATCGACGGATGAGTAAATATCTGATCGCGTAATATGCTATAAGGCa > 1:1951054/1‑100 (MQ=255) gTCTGATTTTGAGTTTATTTGACTAATGGAAATAGATCATTGAGTGATTCGCTCATCGACGGATGAGTAAATATCTGATCGCGTAATATGCTATAAGGCa < 1:609128/100‑1 (MQ=255) gTCTGATTTTGAGTTTATTTGACTAATGAAAATAGATCATTGAGTGATTCGCTCATCGACGGATGAGTAAATATCTGATCGCGTAATATGCTATAAGGCa > 1:2252430/1‑100 (MQ=255) tCTGATTTTGAGTTTATTTGACTAATGGAAATAGATCATTGAGTGATTCGCTCATCGACGGATGAGTAAATATCTGATCGCGTAATATGCTATAAGGCAg < 1:1794118/100‑1 (MQ=255) cTGATTTTGAGTTTATTTGACTAATGAAAATAGATCATTGAGTGATTCGCTCATCGACGGATGAGTAAATATCTGATCGCGTAATATGCtagatcggaag > 2:3391523/1‑91 (MQ=255) cTGATTTTGAGTTTATTTGACTAATGAAAATAGATCATTGAGTGATTCGCTCATCGACGGATGAGTAAATATCTGATAGCGTAATAAGCTATAAGGc > 2:2460365/1‑97 (MQ=255) tGATTTTGAGTTTATTTGACTAATGGAAATAGATCATTGAGTGATTCGCTCATCGACGGATGAGTAAATATCTGATCGCGTAATATGCTATAAGGCAGcc > 2:2916370/1‑100 (MQ=255) ttttGAGTTTATTTGACTAATGGAAATAGATCATTGAGTGATTCGCTCATCGACGGATGAGTAAATATCTGATCGCGTAATATGCTATAAGGCAGCCCgg > 1:699937/1‑100 (MQ=255) ttGAGTTTATTTGACTAATGGAAATAGATCATTGAGTGATTCGCTCATCGACGGATGAGTAAATATCTGATCGCGTAATATGCTATAAGGCAGCCCGGca < 1:3900821/100‑1 (MQ=255) gAGTTTATTTGACTAATGAAAATAGATCATTGAGTGATTCGCTCATCGACGGATGAGTAAATATCTGATCGCGTAATATGCTATAAGGCAGCCCGGcatc < 1:1260351/100‑1 (MQ=255) gAGTTTAGTTGACTAATGGAACTAGATCATTGAGTGATTCGCTCATCGACGGATGAGTAAATATCTTATCGCGTAATAGTCTATAAGGCAGCCCGGcatc < 2:422061/100‑1 (MQ=255) aGTTTATTTGACTAATGGAAATAGATCATTGAGTGATTCGCTCATCGACGGATGAGTAAATATCTGATCGCGTAATATGCTATAAGGCAGCCCGGcatcc > 1:2409640/1‑100 (MQ=255) gTTTATTTGACTAATGGAAATAGATCATTGAGTGATTCGCTCATCGACGGATGAGTAAATATCTGATCGCGTAATATGCTATAAGGCAGCCCGGcatcca > 1:1507043/1‑100 (MQ=255) gTTTATTTGACTAATGAAAATAGATCATTGAGTGATTCGCTCATCGACGGATGAGTAAATATCTGATCGCGTAATATGCTATAAGGCAGCCCGGcatcca > 1:3433883/1‑100 (MQ=255) gTTTATGTGACTAATGGAAATAGATCATTGAGTGATTCGCTCATCGACGGATGAGTAAATATCTGATCGCGTAATATGCTATAAGGCAGCCCGGcatcca < 1:753020/100‑1 (MQ=255) tttATTTGACTAATGGAAATAGATCATTGAGTGATTCGCTCATCGACGGATGAGTAAATATCTGATCGCGTAATATGCTATAAGGCAGCCCGGcatccat > 1:2379378/1‑100 (MQ=255) ttATTTGACTAATGGAAATAGATCATTGAGTGATTCGCTCATCGACGGATGAGTAAATATCTGATCGCGTAATATGCTATAAGGCAGCCCGGcatccatc < 1:3958525/100‑1 (MQ=255) ttATTTGACTAATGAAAATAGATCATTGAGTGATTCGCTCATCGACGGATGAGTAAATATCTGATCGCGTAATATGCTATAAGGCAGCCCGGcatccatc < 1:313063/100‑1 (MQ=255) ttATTTGACTAATGAAAATAGATCATTGAGTGATTCGCTCATCGACGGATGAGTAAATATCTGATCGCGTAATATGCTATAAGGCAGCCCGGcatccatc > 2:909427/1‑100 (MQ=255) tATTTGACTAATGGAAATAGATCATTGAGTGATTCGCTCATCGACGGATGAGTAAATATCTGATCGCGTAATATGCTATAAGGCAGCCCGGCATCCATCa < 1:1467787/100‑1 (MQ=255) gACTAATGGAAATAGATCATTGAGTGATTCGCTCATCGACGGATGAGTAAATATCTGATCGCGTAATATGCTATAAGGCAGCCCGGCATCCATCACCAtt > 1:2495007/1‑100 (MQ=255) gACTAATGGAAATAGATCATTGAGTGATTCGCTCATCGACGGATGAGTAAATATCTGATCGCGTAATATGCTATAAGGCAGCCCGGCATCCATCACCAtt > 1:1604357/1‑100 (MQ=255) gACTAATGGAAATAGATCATTGAGTGATTCGCTCATCGACGGATGAGTAAATATCTGATCGAGTAATATGCTATAAGGCAGCCCGGCATCCATCACCAtt > 2:2249235/1‑100 (MQ=255) gACTAATGAAAATAGATCATTGAGTGATTCGCTCATCGACGGATGAGTAAATATCTGATCGCGTAATATGCTATCAGGCAGCCCGGCATCCATCACCAtt > 2:2671688/1‑100 (MQ=255) cTAATGGAAATAGATCATTGAGTGATTCGCTCATCGACGGATGAGTAAATATCTGATCGCGTAATATGCTATAAGGCAGCCCGGCATCCATCACCAtttt > 1:704232/1‑100 (MQ=255) aTGAAAATAGATCATTGAGTGATTCGCTCATCGACGGATGAGTAAATATCTGATCGCGTAATATGCTATAAGGCAGCCCGGCATCCATCACCATTTTCAc < 1:2748593/100‑1 (MQ=255) tGAAAATAGATCATTGAGTGATTCGCTCATCGACGGATGAGTAAATATCTGATCGCGTAATATGCTATAAGGCAGCCCGGCATCCATCACCATTTTCAc < 1:3125526/99‑1 (MQ=255) tGAAAATAGATCATTGAGTGATTCGCTCATCGACGGATGAGTAAATATCTGATCGCGTAATATGCTATAAGGCAGCCCGGCATCCATCACCATTTTCACt > 1:3360805/1‑100 (MQ=255) | TAAGAAGTTATAGAGTAACAGAGAATTAATAAGATTCTTTTCTCTGAGACGCCAGAATATTTGTTCTGGCGTCTGATTTTGAGTTTATTTGACTAATGAAAATAGATCATTGAGTGATTCGCTCATCGACGGATGAGTAAATATCTGATCGCGTAATATGCTATAAGGCAGCCCGGCATCCATCACCATTTTCACT > NC_000913/318592‑318787 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |