| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 2,782,076 | T→C | 52.0% | V217V (GTA→GTG) | ypjA ← | adhesin‑like autotransporter |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,782,076 | 0 | T | C | 52.0% | 19.7 / 216.7 | 169 | V217V (GTA→GTG) | ypjA | adhesin‑like autotransporter |
| Reads supporting (aligned to +/- strand): ref base T (37/43); new base C (35/52); total (72/97) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.40e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.49e-01 | |||||||||||
Only 100 of 173 total aligned reads displayed.
GTGCCACCAGAATAGATATGCGTATTTTTTGCCGTTGACTTACTATTCAGAGACTGAGTTCCGCCTTCAATCGTCGTGTCCAGCGCACGGCTCTCATATACTCTTTGCTCACCGCCATTTTTAATGGTTGTTGTTTCTACTGTGCTCTGTTCAACATACTGTCGACCACCATTTATGGTTGTGTTCGTTGCCAGACT > NC_000913/2781978‑2782174 | gTGCCACCAGAATAGATATGCGTATTTTTTGCCGTTGACTTACTATTCAGAGACTGAGTTCCGCCTTCAATCGTCGTGTCCAGCGCACGGCTCTCAtata < 1:3606182/100‑1 (MQ=255) gCCACCAGAATAGATATGCGTATTTTTTGCCGTTGACTTACTATTCAGAGACTGAGTTCCGCCTTCAATCGTCGTGTCCAGCGCACGGCTCTCATACAct < 1:2432711/100‑1 (MQ=255) caccaGAATAGATATGCGTATTTTTTGCCGTTGACTTACTATTCAGAGACTGAGTTCCGCCTTCAATCGTCGTGTCCAGCGCACGGCTCTCATATActct > 1:3152025/1‑100 (MQ=255) accaGAATAGATATGCGTATTTTTTGCCGTTGACTTACTATTCAGAGACTGAGTTCCGCCTTCAATCGTCGTGTCCAGCGCACGGCTCTCATACACTCtt > 1:3250120/1‑100 (MQ=255) ccaGAATAGATATGCGTATTTTTTGCCGTTGACTTACTATTCAGAGACTGAGTTCCGCCTTCAATCGTCGTGTCCAGCGCACGGCTCTCATATACTCttt < 1:2539309/100‑1 (MQ=255) ccaGAATAGATATGCGTATTTTTTGCCGTTGACTTACTATTCAGAGACTGAGTTCCGCCTTCAATCGTCGTGTCCAGCGCACGGCTCTCATACACTCttt > 1:1045942/1‑100 (MQ=255) ccaGAATAGATATGCGTATTTTTTGCCGTTGACTTACTATTCAGAGACTGAGTTCCGCCTTCAATCGTCGTGTCCAGCGCACGGCTCTCATACACTCttt > 2:920971/1‑100 (MQ=255) caGAATAGATATGCGTATTTTTTGCCGTTGACTTACTATTCAGAGACTGAGTTCCGCCTTCAATCGTCGTGTCCAGCGCACGGCTCTCATACACTCTTTg < 1:1790184/100‑1 (MQ=255) aGAATAGATATGCGTATTTTTTGCCGTTGACTTACTATTCAGAGACTGAGTTCCGCCTTCAATCGTCGTGTCCAGCGCACGGCTCTCATACACTCTTTGc < 1:3479058/100‑1 (MQ=255) aGAATAGATATGCGTATTTTTTGCCGTTGACTTACTATTCAGAGACTGAGTTCCGCCTTCAATCGTCGTGTCCAGCGCACGGCTCTCATACACTCTTTGc < 2:3750486/100‑1 (MQ=255) aaTAGATATGCGTATTTTTTGCCGTTGACTTACTATTCAGAGACTGAGTTCCGCCTTCAATCGTCGTGTCCAGCGCACGGCTCTCATACACTCTTTGCTc < 1:1262177/100‑1 (MQ=255) atcttatGCGTATTTTTTGCCGTTGACTTACTATTCAGAGACTGAGTTCCGCCTTCAATCGTCGTGTCCAGCGCACGGCTCTCATATACTCTTTGCTCAc < 2:2539237/96‑1 (MQ=255) aGATATGCGTATTTTTTGCCGTTGACTTACTATTCAGAGACTGAGTTCCGCCTTCAATCGTCGTGTCCAGCGCACGGCTCTCATATACTCTTTGCTCAcc < 1:1362702/100‑1 (MQ=255) taggCGTATTTTCTGCCGTTGATTTACTATTCAGCGACTGAGTTCCGCCTTCGATCGTCGTGGCCAGCGCACGGCTCTCATACACTCTTTGCTCACCGc < 2:3313187/96‑1 (MQ=255) gCGTATTTTTTGCCGTTGACTTACTATTCAGAGACTGAGTTCCGCCTTCAATCGTCGTGTCCAGCGCACGGCTCTCATATACTCTTTGCTCACCGCCAtt > 2:848913/1‑100 (MQ=255) cGTATTTTTTGCCGTTGACTTACTATTCAGAGTCTGAGTTCCGCCTTCAATCGTCGTGTCCAGCGCACGGCTCTCATATACTCTTTGCTCACCGCCAttn < 2:3948056/100‑2 (MQ=255) cGTATTTTTTGCCGTTGACTTACTATTCAGAGACTGAGTTCCGCCTTCAATCGTCGTGTCCAGCGCACGGCTCTCATACACTCTTTGCTCACCGCCAtt > 2:3349020/1‑99 (MQ=255) gTATTTTTTTTTGTTGTCTTACTATTCAGAGACTGAGTTCCGCCTTCAATCGTCGTGTCCAGCGCACGGCTCTCATATACTCTTTGCTCACCGCCAtttt > 2:1652372/1‑100 (MQ=255) tATTTTTTGCCGTTGACTTACTATTCAGAGACTGAGTTCCGCCTTCAATCGTCGTGTCCAGCGCACGGCTCTCATACACTCTTTGCTCACCGCCAttttt < 2:1243005/100‑1 (MQ=255) ttttttGCCGTTGACTTACTATTCAGAGACTGAGTTCCGCCTTCAATCGTCGTGTCCAGCGCACGGCTCTCATATACTCTTTGCTCACCGCCATTTTTaa < 1:421918/100‑1 (MQ=255) tttttGCCGTTGACTTACTATTCAGAGACTGAGTTCCGCCTTCAATCGTCGTGTCCAGCGCACGGCTCTCATACACTCTTTGCTCACCGCCATTTTTAAt < 1:213678/100‑1 (MQ=255) tttGCCGTTGACTTACTATTCAGAGACTGATTTCCGCCTTCAATCGTCGTGTCCAGCGCACGGCTCTCATATACTCTTTGCTCACCGCCATTTTTAATg < 2:1764093/99‑1 (MQ=255) ttGCCGTTGACTTACTATTCAGAGACTGAGTTCCGCCTTCAATCGTCGTGTCCAGCGCACGGCTCTCATATACTCTTTGCTCACCGCCATTTTTAATGgt < 1:2523161/100‑1 (MQ=255) tGCCGTTGACTTACTATTCAGAGACTGAGTTCCGCCTTCAATCGTCGTGTCCAGCGCACCGCTCTCATATACTCTTTGCTCACCGCCATTTTTAATGgtt > 2:3830837/1‑100 (MQ=255) ccGTTGACTTACTATTCAGAGACTGAGTTCCGCCTTCAATCGTCGTGTCCAGCGCACGGCTCTCATATACTCTTTGCTCACCGCCATTTTTAATGgttgt > 1:1633251/1‑100 (MQ=255) gTTGACTTACTATTCAGAGACTGAGTTCCGCCTTCAATCGTCGTGTCCAGCGCACGGCTCTCATACACTCTTTGCTCACCGCCATTTTTAATGgttgttg < 1:1493305/100‑1 (MQ=255) ttGACTTACTATTCAGAGACTGAGTTCCGCCTTCAATCGTCGTGTCCAGCGCACGGCTCTCATACACTCTTTGCTCACCGCCATTTTTAATGgttgttgt < 1:2604082/100‑1 (MQ=255) gACTTACTATTCAGAGACTGAGTTCCGCCTTCAATCGTCGTGTCCAGCGCTCGGCTCTCATACACTCTTTGCTCACCGCCATTTTTAATGGTTGTTGttt < 2:205891/100‑1 (MQ=255) gACTTACTATTCAGAGACTGAGTTCCGCCTTCAATCGTCGTGTCCAGCGCACGGCTCTCATACACTCTTTGCTCACCGCCATTTTTAATGGTTGTTGttt > 1:3195480/1‑100 (MQ=255) aCTTACTATTCAGAGACTGAGTTCCGCCTTCAATCGTCGTGTCCAGCGCACGGCTCTCATATACTCTTTGCTCACCGCCATTTTTAATGGTTGTTGTTTc < 2:4072569/100‑1 (MQ=255) aCTTACTATTCAGAGACTGAGTTCCGCCTTCAATCGTCGTGTCCAGCGCACGGCTCTCATATACTCTTTGCTCACCGCCATTTTTAATGGTTGTTGTTTc < 1:2200518/100‑1 (MQ=255) cTTACTATTCAGAGACTGAGTTCCGCCTTCAATCGTCGTGTCCAGCGCACGGCTCTCATACACTCTTTGCTCACCGCCATTTTTAATGGTTGTTGTTTCt > 1:2529919/1‑100 (MQ=255) cTTACTATTCAGAGACTGAGTTCCGCCTTCAATCGTCGTGTCCAGCGCACGGCTCTCATACACTCTTTGCTCACCGCCATTTTTAATGGTTGTTGTTTCt > 1:2757070/1‑100 (MQ=255) ttACTATTCAGAGACTGAGTTCCGCCTTCAATCGTCGTGTCCAGCGCACGGCTCTCATATACTCTTTGCTCACCGCCATTTTTAATGGTTGTTGTTTCTa < 1:3221763/100‑1 (MQ=255) tACTATTCAGAGACTGAGTTCCGCCTTCAATCGTCGTGTCCAGCGCACGGCTCTCATACACTCTTTGCTCACCGCCATTTTTAATGGTTGTTGTTTCTAc > 1:1235480/1‑100 (MQ=255) tACTATTCAGAGACTGAGTTCCGCCTTCAATCGTCGTGTCCAGCGCACGGCTCTCATACACTCTTTGCTCACCGCCATTTTTAATGGTTGTTGTTTCTAc < 1:3901637/100‑1 (MQ=255) cTATTCAGAGACTGAGTTCCGCCTTCAATCGTCGTGTCCAGCGCACGGCTCTCATATACTCTTTGCTCACCGCCATTTTTAATGGTTGTTGTTTCTACtg < 2:2847440/100‑1 (MQ=255) cTATTCAGAGACTGAGTTCCGCCTTCAATCGTCGTGTCCAGCGCACGGCTCTCATACACTCTTTGCTCACCGCCATTTTTAATGGTTGTTGTTTCTACt < 2:2981758/99‑1 (MQ=255) tATTCAGAGACTGAGTTCCGCCTTCAATCGTCGTGTCCAGCGCACGGCTCTCATATACTCTTTGCTCACCGCCATTTTTAATGGTTGTTGTTTCTACtgt < 1:691578/100‑1 (MQ=255) aTTCAGAGACTGAGTTCCGCCTTCAATCGTCGTGTCCAGCGCACGGCTCTCATATACTCTTTGCTCACCGCCATTTTTAATGGTTGTTGTTTCTACtgtg > 1:767428/1‑100 (MQ=255) ttCAGAGACTGAGTTCCGCCTTCAATCGTCGTGTCCAGCGCACGGCTCTCATATACTCTTTGCTCACCGCCATTTTTAATGGTTGTTGTTTCTACTGTGc < 1:4017865/100‑1 (MQ=255) ttCAGAGACTGAGTTCCGCCTTCAATCGTCGTGTCCAGCGCACGGCTCTCATATACTCTTTGCTCACCGCCATTTTTAATGGTTGTTGTTTCTACTGTGc < 1:3044873/100‑1 (MQ=255) cAGAGACTGAGTTCCGCCTTCAATCGTCGTGTCCAGCGCACGGCTCTCATACACTCTTTGCTCACCGCCATTTTTAATGGTTGTTGTTTCTACTGTGctc > 1:932790/1‑100 (MQ=255) cAGAGACTGAGTTCCGCCTTCAATCGTCGTGTACAGCGCTCGTCTCTCATACACTCTTTGCTCACCGCCATTTTTAATGGTTGTTGTTTCTACTGTGctc < 2:2904105/100‑1 (MQ=255) agaCTGAGTTCCGCCTTCAATCGTCGTGTCCAGCGCACGGCTCTCATATACTCTTTGCTCACCGCCATTTTTAATGGTTGTTGTTTCTACTGTGCTCTGt > 1:831324/1‑100 (MQ=255) cttccgatctgCCTTCAATCGTCGTGTCCAGCGCACGGCTCTCATACACTCTTTGCTCACCGCCATTTTTAATGGTTGTTGTTTCTACTGTGCTCTGTTc < 1:3459753/90‑1 (MQ=255) aCTGAGTTCCGCCTTCAATCGTCGTGTCCAGCGCACGGCTCTCATACACTCTTTGCTCACCGCCATTTTTAATGGTTGTTGTTTCTACTGTGCTCTGTTc < 1:2185387/100‑1 (MQ=255) aCTGAGTTCCGCCTTCAATCGTCGTGTCCAGCGCACGGCTCTCATACACTCTTTGCTCACCGCCATTTTTAATGGTTGTTGTTTCTACTGTGCTCTGTTc > 2:1504990/1‑100 (MQ=255) cTGAGTTCCGCCTTCAATCGTCGTGTCCAGCGCACGGCTCTCATACACTCTTTGCTCACCGCCATTTTTAATGGTTGTTGTTTCTACTGTGCTCTGTTCa < 1:2320782/100‑1 (MQ=255) cTGAGTTCCGCCTTCAATCGTCGTGTCCAACGCACGGCTCTCATACACTCTTTGCTCAACGCAGTTTGTAGTAGTTGTTGTTTCTACTGTGatct > 2:3773246/1‑95 (MQ=255) tGAGTTCCGCCTTCAATCGTCGTGTCCAGCGCACGGCTCTCATATACTCTTTGCTCACCGCCATTTTTAATGGTTGTTGTTTCTACTGTGCTCTGTTCaa < 2:3199769/100‑1 (MQ=255) tGACTTCCGCCTTCAATCGGCGTGTCAAGCGCACGGCTCTCATACACTCTTTGCTCACCGCCATTTTTAATGGTTGTTGTTTCTACTGTGCTCTGTTCaa < 1:3934290/100‑1 (MQ=255) gAGTTCCGCCTTCAATCGTCGTGTCCAGCGCACGGCTCTCATACACTCTTTGCTCACCGCCATTTTTAATGGTTGTTGTTTCTACTGTGCTCTGTTCAAc > 1:1119372/1‑100 (MQ=255) gAGTTCCGCCTTCAATCGTCGTGTCCAGCGCACGGCTCTCATACACTCTTTGCTCACCGCCATTTTTAATGGTTGTTGTTTCTACTGTGCTCTGTTCAAc < 2:3090554/100‑1 (MQ=255) gAGTTCCGCCTTCAATCGTCGTGTCCAGCGCACGGCTCTCATACACTCTTTGCTCACCGCCATTTTTAATGGTTGTTGTTTCTACTGTGCTCTGTTCAAc < 1:2116601/100‑1 (MQ=255) gAGTTCCGCCTTCAATCGTCGTGTCCAGCGCACGGCTCTCATACACTCTTTGCTCACCGCCATTTTTAATGGTTGTTGTTTCTACTGTGCTCTGTTCAAc < 1:941539/100‑1 (MQ=255) gAGTTCCGCCGTCAATCGTCGTGTCCAGCGCACGGCTCTCATCCACTCTTTGCTCACCGCCATGTTTAATGGTGCTTGTTTATACTGTGCTCTGTTAAAc < 2:2295825/100‑1 (MQ=255) gAGTTCCGCATTCAATCGTCGTGTCCAGCGCACGGCTCTCATACACTCTTTGCTCACCGCCATTTTTAATGGTTGTTGTTTCTACTGTGCTCTGTTCAAc < 2:1603718/100‑1 (MQ=255) gTTCCGCCTTCAATCGTCGTGTCCAGCGCACGGCTCTCATATACTCTTTGCTCACCGCCATTTTTAATGGTTGTTGTTTCTACTGTGCTCTGTTCAACAt > 2:2850/1‑100 (MQ=255) tCCGCCTTCAATCGTCGTGTCCAGCGCACGGCTCTCATATACTCTTTGCTCACCGCCATTTTTAATGGTTGTTGTTTCTACTGTGCTCTGTTCAACATAc > 2:194211/1‑100 (MQ=255) tCCGCCTTCAATCGTCGTGTCCAGCGCACGGCTCTCATACACTCTTTGCTCACCGCCATTTTTAATGGTTGTTGTTTCTACTGTGCTCTGTTCAACATAc < 2:492620/100‑1 (MQ=255) ccGCCTTCAATCGTCGTGTCCAGCGCACGGCTCTCATATACTCTTTGCTCACCGCCATTTTTAATGGTTGTTGTTTCTACTGTGCTCTGATCAACATACt > 2:2710947/1‑100 (MQ=255) ccGCCTTCAATCGTCGTGTCCAGCGCACGGCTCTCATACACTCTTTGCTCACCGCCATTTTTAATGGTTGTTGTTTCTACTGTGCTCTGTTCAACATACt > 2:3910189/1‑100 (MQ=255) gCCTTCAATCGTCGTGTCCATCGCACGTCTCTCATATACTCTTTGCTCACCGCCATTTTTAATGGTTGTGGTTTCTACTGTGCTCTGTTCAACATAc < 2:1109608/97‑1 (MQ=255) gCCTTCAATCGTCGTGTCCAGCGCACGGCTCTCATACACTCTTTGCTCACCGCCATTTTTAATGGTTGTTGTTTCTACTGTGCTCTGTTCagatcggaag > 2:3459731/1‑91 (MQ=255) ccTTCAATCGTCGTGTCCAGTGCACGGCTCTCATATACTCTTTGCTCACCGCCATTTTTAATGGTTGTTGTTTCTACTGTGCTCTGTTCAACATACTGTc < 1:1691023/100‑1 (MQ=255) ttCAATCGTCGTGTCCAGCGCACGGCTCTCATACACTCTTTGCTCACCGCCATTTTTAATGGTTGTTGTTTCTACTGTGCTCTGTTCAACATACTGTCGa > 1:2343521/1‑100 (MQ=255) cAATCGTCGTGTCCAGCGCACGGCTCTCATATACTCTTTGCTCACCGCCATTTTTAATGGTTGTTGTTTCTACTGTGCTCTGTTCAACATACTGTCGacc > 2:557224/1‑100 (MQ=255) cAATCGTCGTGTCCAGCGCACGGCTCTCATATACTCTTTGCTCACCGCCATTTTTAATGGTTGTTGTTTCTACTGTGCTCTGTTCAACATACTGTCGacc < 2:2613758/100‑1 (MQ=255) cAATCGTCGTGTCCAGCGCACGGCTCTCATACACTCTTTGCTCACCGCCATTTTTAATGGTTGTTGTTTCTACTGTGCTCTGTTCAACATACTGTCGacc > 1:206395/1‑100 (MQ=255) aaTCGTCGTGTCCAGCGCACGGCTCTCATATACTCTTTGCTCACCGCCATTTTTAATGGTTGTTGTTTCTACTGTGCTCTGTTCAACATACTGTCGacca > 2:668764/1‑100 (MQ=255) aaTCGTCGTGTCCAGCGCACGGCTCTCATATACTCTTTGCTCACCGCCATTTTTAATGGTTGTTGTTTCTACTGTGCTCTGTTCAACATACTGTCGacca < 2:859698/100‑1 (MQ=255) aTCGTCGTGTCCAGCGCACGGCTCTCATATACTCTTTGCTCACCGCCATTTTTAATGGTTGTTGTTTCTACTGTGCTCTGTTCAACATACTGTCGacc < 2:2564642/98‑1 (MQ=255) cgtcgtGTCCAGCGCACGGCTCTCATATACTCTTTGCTCACCGCCATTTTTAATGGTTGTTGTTTCTACTGTGCTCTGTTCAACATACTGTCGAccacca > 2:516009/1‑100 (MQ=255) cgtcgtGTCCAGCGCACGGCTCTCATACACTCTTTGCTCACCGCCATTTTTAATGGTTGTTGTTTCTACTGTGCTCTGTTCAACATACTGTCGAccacca < 1:2374205/100‑1 (MQ=255) gtcgtGTCCAGCGCACGGCTCTCATACACTCTTTGCTCACCGCCATTTTTAATGGTTGTTGTTTCTACTGTGCTCTGTTCAACATACTGTCGAccacca > 2:852500/1‑99 (MQ=255) gtcgtGTCCAGCGCACGGCTCTCATACACTCTTTGCTCACCGCCATTTTTAATGGTTGTTGTTTCTACTGTGCTCTGTTCAACATACTGTCGACCACCAt > 1:2986014/1‑100 (MQ=255) tcgtGTCCAGCGCACGGCTCTCATATACTCTTTGCTCACCGCCATTTTTAATGGTTGTTGTTTCTACTGTGCTCTGTTCAACATACTGTCGACCACCAtt < 2:2946119/100‑1 (MQ=255) tcgtGTCCAGCGCACGGCTCTCATACACTCTTTGCTCACCGCCATTTTTAATGGTTGTTGTTTCTACTGTGCTCTGTTCAACATACTGTCGACCACCAtt < 1:1930981/100‑1 (MQ=255) gtgtCGAGCGCACGGCTCTCATACACTCTTTGCTCACCGCCATTTTTAATGGTTGTTGTTTCTACTGTGCTCTGTTCAACATACTGTCGACCACCATTTa < 1:48787/100‑1 (MQ=255) tgtCCAGTGCACGGCTCTAATATATTCTTTTCTCACCTTTATTTTTTATGTTTGTTGTTTCTACTGTGCTCTGTTCAACATACTGTCGACGACCAtt < 2:227487/97‑1 (MQ=255) gtCCAGCGCACGGCTCTCATACACTCTTTGCTCACCGCCATTTTTAATGGTTGTTGTTTCTACTGTGCTCTGTTCAACATACTGTCGACCACCATTTATg < 1:1308165/100‑1 (MQ=255) ccAGCGCACGGCTCTCATATACTCTTTGCTCACCGCCATTTTTAATGGTTGTTGTTTCTACTGTGCTCTGTTCAACATACTGTCGACCACCATTTATGGt > 1:2195765/1‑100 (MQ=255) ccAGCGCACGGCTCTCATATACTCTTTGCTCACCGCCATTTTTAATGGTTGTTGTTTCTACTGTGCTCTGTTCAACATACTGTCGACCACCATTTATGGt < 1:848919/100‑1 (MQ=255) ccAGCGCACGGCTCTCATATACTCTTTGCTCACCGCCATTTTTAATGGTTGTTGTTTCTACTGTGCTCTGTTCAACATACTGTCGACCACCATTTATGGt > 1:4121084/1‑100 (MQ=255) aGCGCACGTCTCTCATAAACTCTTTGCTCACCGCCTTTTTTACTAGTTGTTGGTTCTACTGTGCTCTGTTCAACATACTGTCGACCACCATTTATGGTtg < 2:1300651/100‑1 (MQ=255) gcgcACGGCTCTCATATACTCTTTGCTCACCGCCATTTTTAATGGTTGTTGTTTCTACTGTGCTCTGTTCAACATACTGTCGACCACCATTTATGGTtg < 2:2741314/99‑1 (MQ=255) gcACGGCTCTCATATACTCTTTGCTCACCGCCATTTTTAATGGTTGTTGTTTCTACTGTGCTCTGTTCAACATACTGTCGACCACCATTTATGGTTgtgt < 1:1884222/100‑1 (MQ=255) ggCTCTCATACACTCTTTGCTCACCGCCATTTTTAATGGTTGTTGTTTCTACTGTGCTCTGTTCAACATACTGTCGACCACCATTTATGGTTGTGTTCGt < 1:2090551/100‑1 (MQ=255) gCTCTCATATACTCTTTGCTCACCGCCATTTTTAATGGTTGTTGTTTCTACTGTGCTCTGTTCAACATACTGTCGACCACCATTTATGGTTGTGTTCGtt > 2:265144/1‑100 (MQ=255) ctctCATATACTCTTTGCTCACCGCCATTTTTAATGGTTGTTGTTTCTACTGTGCTCTGTTCAACATACTGTCGACCACCATTTATGGTTGTGTTCGTTg > 1:2411931/1‑100 (MQ=255) ctcATACACTCTTTGCTCACCGCCATTTTTAATGGTTGTTGTTTCTACTGTGCTCTGTTCAACATACTGTCGACCACCATTTATGGTTGTGTTCGTTGcc < 2:146079/100‑1 (MQ=255) tcATATACTCTTTGCTCACCGTCATTTTTAATGGTTGTTGTTTCTACTGTGCTCTGTTCAACATACTGTCGACCACCATTTATGGTTGTGTTCGTTGCCa < 2:1177330/100‑1 (MQ=255) tcATATACTCTTTGCTCACCGCCATTTTTAATGGTTGTTGTTTCTACTGTGCTCTGTTCAACATACTGTCGACCACCATTTATGGTTGTGTTCGTTGCCa < 1:554181/100‑1 (MQ=255) tcATATACTCTTTGCTCACCGCCATTTTTAATGGTTGTTGTTTCTACTGTGCTCTGTTCAACATACTGTCGACCACCATTTATGGTTGTGTTCGTTGCCa > 2:1313160/1‑100 (MQ=255) tcATACACTCTTTGCTCACCGCCATTTTTAATGGTTGTTGTTTCTACTGTGCTCTGTTCAACATACTGTCGACCACCATTTATGGTTGTGTTCGTTGCCa > 1:1753270/1‑100 (MQ=255) cATATACTCTTTGCTCACCGCCATTTTTAATGGTTGTTGTTTCTACTGTGCTCTGTTCAACATACTGTCGACCACCATTTATGGTTGTGTTCGTTGCCAg > 2:1519241/1‑100 (MQ=255) cATACACTCTTTGCTCACCGCCATTTTTTTTTTTTTTTTTTTCTACTGAGCTCTGTTCAACATACTGTCGACCACCATTTATGGTTGTGTTCGTTGCCAg > 2:433085/1‑100 (MQ=255) cATACACTCTTTGCTCACCGCCATTTTTAATGGTTGTTGTTTCTACTGTGCTCTGTTCAACATACTGTCGACCACCATTTATGGTTGTGTTCGTTGCCAg < 1:2928914/100‑1 (MQ=255) taCTCTTTGCTCACCGCCATTTTTAATGGTTGTAGTTTCTACTTAGCTCTGTTCAACATAATTTCGACCAGCATTTATCAGTGTGTTCCCTGCCAGa > 2:3588453/1‑97 (MQ=255) | GTGCCACCAGAATAGATATGCGTATTTTTTGCCGTTGACTTACTATTCAGAGACTGAGTTCCGCCTTCAATCGTCGTGTCCAGCGCACGGCTCTCATATACTCTTTGCTCACCGCCATTTTTAATGGTTGTTGTTTCTACTGTGCTCTGTTCAACATACTGTCGACCACCATTTATGGTTGTGTTCGTTGCCAGACT > NC_000913/2781978‑2782174 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |