| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 3,057,150 | C→T | 16.5% | intergenic (‑201/+28) | ibsC ← / ← serA | toxic membrane protein/D‑3‑phosphoglycerate dehydrogenase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,057,150 | 0 | C | T | 16.5% | 491.8 / 76.0 | 212 | intergenic (‑201/+28) | ibsC/serA | toxic membrane protein/D‑3‑phosphoglycerate dehydrogenase |
| Reads supporting (aligned to +/- strand): ref base C (90/86); new base T (20/15); total (111/101) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.81e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.14e-01 | |||||||||||
Only 100 of 217 total aligned reads displayed.
ATCTGACTTTGATTTATTTTCTGGAGCAGACTCGCAAAGTAGAATGCGCAACGCGGCAACGGTGTGGAGAAGGGAT‑AAAAAAACGGGCAAGTCAGTGACCTGCCCGTTGATTTTCAGAGAAGGGGAATTAGTACAGCAGACGGGCGCGAATGGTACCCGGAATAGCTTTCATTGCCTGCAGCGCTTTTTCGGCAACGTC > NC_000913/3057051‑3057249 | cTGACTTTGATTTATTTTCTGGAGCAGACTCGCAAAGTAGAATGCGCAACGCGGCCACGGTGTGGAGAAGGGAT‑AAAAAAACGGGCAAGTCAGTGACCt > 2:1607199/1‑99 (MQ=255) tGACTTTGATTTATTTTCTGGAGCAGACTCGCAAAGTAGAATGCGCAACGCGGCAACGGTGTGGAGAAGGGAT‑AAAAAAACGGGCAAGTCAGTGACCTGc > 2:3315170/1‑100 (MQ=255) aCTTTGATTTATTTTCTGGAGCAGACTCGCAAAGTAGAATGCGCAACGCGGCAACGGTGTGGAGAAGGGAT‑AAAAAAACGGGCAAGTCAGTGACCTGccc < 2:2233206/100‑1 (MQ=255) cTTTGATTTATTTTCTGGAGCAGACTCGCAAAGTAGAATGCGCAACGCGGCAACGGTGTGGAGAAGGGAT‑AAAAAAACGGGCAGGTCACTGACTTGccc < 1:1969978/99‑1 (MQ=255) cTTTGATTTATTTTCTGGAGCAGACTCGCAAAGTAGAATGCGCAACGCGGCAACGGTGTGGAGAAGGGAT‑AAAAAAACGGGCAAGTCAGTGACCTGCCCg < 1:1178715/100‑1 (MQ=255) cTTTGATTTATTTTCTGGAGCAGACTCGCAAAGTAGAATGCGCAACGCGGCAACGGTGTGGAGAAGGGAT‑AAAAAAACGGGCAAGTCAGTGACCTGCCCg > 1:1587049/1‑100 (MQ=255) cTTTGATTTATTTTCTGGAGCAGACTCGCAAAGTAGAATGCGCAACGCGGCAACGGTGTCGAGAAGGGAT‑AAAAAAACGGGCAAGTCAGTGACCTGCCCg > 2:3913845/1‑100 (MQ=255) tttGATTTATTTTCTGGAGCAGACTCGCAAAGTAGAATGCGCAACGCGGCAACGGTGTGGAGAAGGGAT‑AAAAAAACGGGCAGGTCACTGACTTGCCCGt < 1:2347763/100‑1 (MQ=39) tttGATTTATTTTCTGGAGCAGACTCGCAAAGTAGAATGCGCAACGCGGCAACGGTGTGGAGAAGGGAT‑AAAAAAACGGGCAAGTCAGTGACCTGCCCGt < 1:3336131/100‑1 (MQ=255) gATTTATTTTCTGGAGCAGACTCGCAAAGTAGAATGCGCAATGCGGCAACGGTGTGGAGAAGGGAT‑AAAAAAACGCGCAAGTAAGTGACATGCCCGTTg > 2:3391872/1‑99 (MQ=255) gATTTATTTTCTGGAGCAGACTCGCAAAGTAGAATGCGCAACGCGGCAACGGTGTGGAGAAGGGAT‑AAAAAACCGGGCAAGTCAGTGACCTGCCCGTTg < 1:829357/99‑1 (MQ=255) gATTTATTTTCTGGAGCAGACTCGCAAAGTAGAATGCGCAACGCGGCAACGGTGTGGAGAAGGGAT‑AAAAAAACGGGCAGGTCACTGACTTGCCCGtttt < 1:1451280/100‑3 (MQ=38) gATTTATTTTCTGGAGCAGACTCGCAAAGTAGAATGCGCAACGCGGCAACGGTGTGGAGAAGGGAT‑AAAAAAACGGGCAGGTCACTGACTTGCCCGtttt < 1:2919876/100‑3 (MQ=38) gATTTATTTTCTGGAGCAGACTCGCAAAGTAGAATGCGCAACGCGGCAACGGTGTGGAGAAGGGAT‑AAAAAAACGGGCAGGTCACTGACTTGCCCGtttt < 2:2063121/100‑3 (MQ=38) atttatttTCTGGAGCAGACTCGCAAAGTAGAATGCGCAACGCGGCAACGGTGTGGGGAAGGGAT‑AAAAAAACGGGCAAGTCAGTGACCTGCCCg < 2:2546265/95‑1 (MQ=255) tttatttTCTGGAGCAGACTCGCAAAGTAGAATGCGCAACGCGGCAACGGTGTGGAGAAGGGAT‑AAAAAAACGGGCAGGTCACTGACTTGCCCGtttttt < 1:1699774/100‑5 (MQ=38) tttatttTCTGGAGCAGACTCGCAAAGTAGAATGCGCAACGCGGCAACGGTGTGGAGAAGGGAT‑AAAAAAACGGGCAAGTCAGTGACCTGCCGGGTGAt > 2:2097806/1‑99 (MQ=255) tttatttTCTGGAGCAGACTCGCAAAGTAGAATGCGCAACGCGGCAACGGTGTGGAGAAGGGAT‑AAAAAAACGGGCAAGTCAGTGACCTGCCCGTTGAtt > 2:3648395/1‑100 (MQ=255) tttatttTCTGGAGCAGACTCGCAAAGTAGAATGCGCAACGCGGCAACGGTGTGGAGAAGGGAT‑AAAAAAACGGGCAAGTCAGTGACCTGCCCGTTGAtt > 1:1317971/1‑100 (MQ=255) tatttTCTGGAGCAGACTCGCAAAGTAGAATGCGCAACGCGGCAACGGTGTGGAGAAGGGAT‑AAAAAAACGGGCAGGTCACTGACTTGCCCGttttttta < 1:2656641/100‑7 (MQ=37) atttTCTGGAGCAGACTCGCAAAGTAGAATGCGCAACGCGGCAACGGTGTGGAGAAGGGAT‑AAAAAAACGGGCAAGTCAGTGACCTGCCCGTTGATTTTc > 2:2699696/1‑100 (MQ=255) ttttCTGGAGCAGACTCGCAAAGTAGAATGCGCAACGCGGCAACGGTGTGGAGAAGGGAT‑AAAAAAACGGGCAAGTCAGTGACCTGCCCGTTGATTTTCa > 2:2637580/1‑100 (MQ=255) tttCTGGAGCAGACTCGCAAAGTAGAATGCGCAACGCGGCAACGGTGTGGAGAAGGGAT‑AAAAAAACGGGCAAGTCAGTGACCTGCCCGTTGATTTTCag < 2:2016837/100‑1 (MQ=255) tttCTGGAGCAGACTCGCAAAGTAGAATGCGCAACGCGGCAACGGTGTGGAGAAGGGAT‑AAAAAAACGGGCAAGTCAGTGACCTGCCCGTTGATTTTCag < 2:387468/100‑1 (MQ=255) ttCTGGAGCAGACTCGCAAAGTAGAATGCGCAACGCGGCAACGGTGTGGAGAAGGGAT‑AAAAAAACGGGCAAGTCAGTGACCTGCCCGTTGATTTTCaga > 2:599760/1‑100 (MQ=255) tCTGGAGCAGACTCGCAAAGTAGAATGCGCAACGCGGCAACGGTGTGGAGAAGGGAT‑AAAAAAACGGGCAAGTCAGTGACCTGCCCGTTGATTTTCagag > 2:1880606/1‑100 (MQ=255) ggAGCAGACTCGCAAAGTAGAATGCGCAACGCGGCAACGGTGTGGAGAAGGGAT‑AAAAAAACGGGCAAGTCAGTGACCTGCCCGTTGATTTTCAGAGAAg > 1:63151/1‑100 (MQ=255) ggAGCAGACTCGCAAAGTAGAATGCGCAACGCGGCAACGGTGTGGAGAAGGGAT‑AAAAAAACGGGCAAGTCAGTGACCTGCCCGTTGATTTTCAGAGAAg > 1:2721629/1‑100 (MQ=255) aGCAGACTCGCAAAGTAGAATGCGCAACGCGGCAACGGTGTGGAGAAGGGAT‑AAAAAAACGGGCAAGTCAGTGACCTGCCCGTTGATTTTCAGAGAAggg < 2:2185645/100‑1 (MQ=255) aGCAGACTCGCAAAGTAGAATGCGCAACGCGGCAACGGTGTGGAGAAGGGAT‑AAAAAAACGGGCAAGTCAGTGACCTGCCCGTTGATTTTCAGAGAAggg < 1:3688470/100‑1 (MQ=255) aGCAGACTCGCAAAGTAGAATGCGCAACGCGGCAACGGTGTGGAGAAGGGAT‑AAAAAAACGGGCAAGTCAGTGACCTGCCCGTTGATTTTCAGAGAAggg < 1:2988228/100‑1 (MQ=255) gCAGACTCGCAAAGTAGAATGCGCAACGCGGCAACGGTGTGGAGAAGGGAT‑AAAAAAACGGGCAAGTCAGTGACCTGCCCGTTGATTTTCAGAGAAgggg < 1:2260597/100‑1 (MQ=255) cAGACTCGCAAAGTAGAATGCGCAACGCGGCAACGGTGTGGAGAAGGGAT‑AAAAAAACGGGCAAGTCAGTGACCTGCCCGTTGATTTTCAGAGAAGGGGa < 1:4012047/100‑1 (MQ=255) aCTCGCAAAGTAGAATGCGCAACGCGGCAACGGTGTGGAGAAGGGAT‑AAAAAAACGGGCAAGTCAGTGACCTGCCCGTTGATTTTCAGAGAAGGGGAAtt < 1:1518538/100‑1 (MQ=255) aCTCGCAAAGTAGAATGCGCAACGCGGCAACGGTGTGGAGAAGGGAT‑AAAAAAACGGGCAAGTCAGTGACCTGCCCGTTGATTTTCAGAGAAGGGGAAtt < 2:475017/100‑1 (MQ=255) cTCGCAAAGTAGAATGCGCAACGCGGCAACGGTGTGGAGAAGGGAT‑AAAAAAACGGGCAAGTCAGTGACCTGCCCGTTGATTTTCAGAGAAGGGGAATTa > 1:3357507/1‑100 (MQ=255) cTCGCAAAGTAGAATGCGCAACGCGGCAACGGTGTGGAGAAGGGAT‑AAAAAAACGGGCAAGTCAGTGACCTGCCCGTTGATTTTCAGAGAAGGGGAATTa > 1:279501/1‑100 (MQ=255) cTCGCAAAGTAGAATGCGCAACGCGGCAACGGTGTGGAGAAGGGAT‑AAAAAAACGGGCAAGTCAGTGACCTGCCCGTTGATTTTCAGAGAAGGGGAATTa > 1:2561425/1‑100 (MQ=255) tCGCAAAGTAGAATGCGCAACGCGGCAACGGTGTGGAGAAGGGAT‑AAAAAAACGGGCAAGTCAGTGACCTGCCCGTTGATTTTCAGAGAAGGGGAATTAg < 2:371095/100‑1 (MQ=255) tCGCAAAGTAGAATGCGCAACGCGGCAACGGTGTGGAGAAGGGAT‑AAAAAAACGGGCAAGTCAGTGACCTGCCCGTTGATTTTCAGAGAAGGGGAATTAg < 1:3320942/100‑1 (MQ=255) tCGCAAAGTAGAATGCGCAACGCGGCAACGGTGTGGAGAAGGGAT‑AAAAAAACGGGCAAGTCAGTGACCTGCCCGTTGATTTTCAGAGAAGGGGAATTAg < 1:3474393/100‑1 (MQ=255) gCAAAGTAGAATGCGCAACGCGGCAACGGTGTGGAGAAGGGAT‑AAAAAAACGGGCAAGTCAGTGACCTGCACGTTGATTTTCAGAGAAGGGGAATTAGTa > 2:4115812/1‑100 (MQ=255) cAAAGTAGAATGCGCAACGCGGCAACGGTGTGGAGAAGGGAT‑AAAAAAACGGGCAAGTCAGTGACCTGCCCGTTGATTTTCAGAGAAGGGGAATTAGTAc < 1:2830310/100‑1 (MQ=255) aaaGTAGAATGCGCAACGCGGCAACGGTGTGGAGAAGGGAT‑AAAAAAACGGGCAAGTCAGTGACCTGCCCGTTGATTTTCAGAGAAGGGGAATTATTAca > 1:1848175/1‑100 (MQ=255) aaGTAGAATGCGCAACGCGGCAACGGTGTGGAGAAGGGAT‑AAAAAAACGGGCAAGTCAGTGACCTGCCCGTTGATTTTCAGAGAAGGGGAATTAGTAcag < 1:3904351/100‑1 (MQ=255) aGTAGAATGCGCAACGCGGCAACGGTGTGGAGAAGGGAT‑AAAAAAACGGGCAAGTCAGTGACCTGCCCGTTGATTTTCAGAGAAGGGGAATTAGTAcagc < 1:1032566/100‑1 (MQ=255) gTAGAATGCGCAACGCGGCAACGGTGTGGAGAAGGGAT‑AAAAAAACGGGCAAGTCAGTGACCTGCCCGTTGATTTTCAGAGAAGGGGAATTAGTAcagca < 1:1651988/100‑1 (MQ=255) gTAGAATGCGCAACGCGGCAACGGTGTGGAGAAGGGAT‑AAAAAAACGGGCAAGTCAGTGACCTGCCCGTTGATTTTCAGAGAAGGGGAATTAGTAcagca < 1:2069185/100‑1 (MQ=255) aGAATGCGCAACGCGGCAACGGTGTGGAGAAGGGAT‑AAAAAAACGGGCAAGTCAGTGACCTGCCCGTTGATTTTCAGAGAAGGGGAATTAGTACAGCAGa > 1:1726719/1‑100 (MQ=255) aGAATGCGCAACGCGGCAACGGTGTGGAGAAGGGAT‑AAAAAAACGGGCAAGTCAGTGACCTGCCCGTTGATTTTCAGAGAAGGGGAATTAGTACAGCAGa > 2:1213307/1‑100 (MQ=255) aTGCGCAACGCGGCAACGGTGTGGAGAAGGGAT‑AAAAAAACGGGCAAGTCAGTGACCTGCCCGTTGATTTTCAGAGAAGGGGAATTAGTACAGCAGACgg > 1:2702197/1‑100 (MQ=255) tGCGCAACGCGGCAACGGTGTGGAGAAGGGAT‑AAAAAAACGGGCAAGTCAGTGACCTGCCCGTTGATTTTCAGAGAAGGGGAATTAGTACAGCAGACggg > 1:2417652/1‑100 (MQ=255) tGCGCAACGCGGCAACGGTGTGGAGAAGGGAT‑AAAAAAACGGGCAAGTCAGTGACCTGCCCGTTGATTTTCAGAGAAGGGGAATTAGTACAGCAGACggg < 1:72156/100‑1 (MQ=255) gcgcAACGCGGCAACGGTGTGGAGAAGGGTTGACGAAACCGGGTAAGTAGGTAACTTGCCGGTGGATTTTCAGAGAGGGGAAATTAGTAAAGCAGAggg > 2:1408154/1‑99 (MQ=255) cgcAACGCGGCAACGGTGTGGAGAAGGGAT‑AAAAAAACGGGCAAGTCAGTGACCTGCCCGTTGATTTTCAGAGAAGGGGAATTAGTACAGCAGACGGgcg > 2:19894/1‑100 (MQ=255) cAACGCGGCAACGGTGTGGAGAAGGGAT‑AAAAAAACGGGCAAGTCAGTGACCTGCCCGTTGATTTTCAGAGAAGGGGAATTAGTACAGCAGACGGGcgcg > 1:3775994/1‑100 (MQ=255) cgcgGCAACGGTGTGGAGAAGGGAT‑AAAAAAACGGGCAAGTCAGTGACCTGCCCGTTGATTTTCAGAGAAGGGGAATTAGTACAGCAGACGGGCGCGAAt < 1:214865/100‑1 (MQ=255) gcgGCAACGGTGTGGAGAAGGGAT‑AAAAAAACGGGCAAGTCAGTGACCTGCCCGTTGATTTTCAGAGAAGGGGAATTAGTACAGCAGACGGGCGCGAATg < 1:1604742/100‑1 (MQ=255) cgGCAACGGTGTGGAGAAGGGAT‑AAAAAAACGGGCAAGTCAGTGACCTGCCCGTTGATTTTCAGAGAAGGGGAATTAGTACAGCAGACGGGCGCGAATgg < 2:297754/100‑1 (MQ=255) cAACGGTGTGGAGAAGGGAT‑AAAAAAACGGGCAAGTCAGTGACCTGCCCGTTGATTTTCAGAGAAGGGGAATTAGTACAGCAGACGGGCGCGAATGGTAc > 2:2889631/1‑100 (MQ=255) cAACGGTGTGGAGAAGGGAT‑AAAAAAACGGGCAAGTCAGTGACCTGCCCGTTGATTTTCAGAGAAGGGGAATTAGTACAGCAGACGGGCGCGAATGGTAc > 2:149324/1‑100 (MQ=255) aaCGGTGTGGAGAAGGGAT‑AAAAAAACGGGCAAGTCAGTGACCTGCACGTTGAGTTTCAGAGTAGTGGTATTAGTACAGCAGACGGGCGCGAATGGTAcc < 2:658860/100‑1 (MQ=255) gtgGAGAAGGGAT‑AAAAAAACGGGCAAGTCAGTGACCTGCCCGTTGATTTTCAGAGAAGGGGAATTAGTACAGCAGACGGGCGCGAATGGTACCCGGAAt > 2:24765/1‑100 (MQ=255) tgGAGAAGGGAT‑AAAAAAACGGGCAAGTCAGTGACCTGCCCGTTGATTTTCAGAGAAGGGGAATTAGTACAGCAGACGGGCGCGAATGGTAcccag > 1:2946412/1‑94 (MQ=255) ggAGAAGGGAT‑AAAACAACGGGCAAGTCAGGGACCTGACCGTTGATTTTCAGAGAAGGGGAATTAGTACAGCAGACGGGCGCGAATGGTACCCGGAATAg > 2:2204609/1‑100 (MQ=255) ggAGAAGGGAT‑AAAAAAACGGGCAAGTCAGTGACCTGCCCGTTGATTTTCAGAGAAGGGGAATTAGTACAGCAGACGGGCGCGAATGGTACCCGGAATAg < 2:3945483/100‑1 (MQ=255) agaAGGGAT‑AAAAAAACGGGCAAGTCAGTGACCTGCCCGTTGATTTTCAGAGAAGGGGAATTAGTACAGCAGACGGGCGCGAATGGTACCCGGAATAGCt < 1:1158172/100‑1 (MQ=255) gaAGGGAT‑AAAAAAACGGGCAAGTCAGTGACCTGCCCGTTGATTTTCAGAGAAGGGGAATTAGTACAGCAGACGGGCGCGAATGGTACCCGGAATAGCtt > 2:1006544/1‑100 (MQ=255) ggAT‑AAAAAAACGGGCAAGTCAGTGACCTGCCCGTTGATTTTCAGAGAAGGGGAATTAGTACAGCAGACGGGCGCGAATGGTACCCGGAATAGCTTTCAt < 1:2608691/100‑1 (MQ=255) gAT‑AAAAAAACGGGCAAGTCAGTGACCTGCCCGTTGATTTTCAGAGAAGGGGAATTAGTACAGCAGACGGGCGCGAATGGTACCCGGAATAGCTTTc < 2:2915552/97‑1 (MQ=255) aT‑AAAAAAACGGGCAAGTCAGTGACCTGCCCGTTGATTTTCAGAGAAGGGGAATTAGTACAGCAGACGGGCGCGAATGGTACCCGGAATAGCTTTCATTg > 2:518027/1‑100 (MQ=255) aT‑AAAAAAACGGGCAAGTCAGTGACCTGCCCGTTGATTTTCAGAGAAGGGGAATTAGTACAGCAGACGGGCGCGAATGGTACCCGGAATAGCTTTCATTg > 1:1254025/1‑100 (MQ=255) t‑AAAAAAACGGGCAAGTCAGTGACCTGCCCGTTGATTTTCAGAGAAGGGGAATTAGTACAGCAGACGGGCGCGAATGGTACCCGGAATAGCTTTCATTGc > 1:2865837/1‑100 (MQ=255) t‑AAAAAAACGGGCAAGTCAGTGACCTGCCCGTTGATTTTCAGAGAAGGGGAATTAGTACAGCAGACGGGCGCGAATGGTACCCGGAATAGCTTTCATTGc < 2:2417638/100‑1 (MQ=255) t‑AAAAAAACGGGCAAGTCAGTGACCTGCCCGTTGATTTTCAGAGAAGGGGAATTAGTACAGCAGACGGGCGCGAATGGTACCCGGAATAGCTTTCATTGc < 1:1243773/100‑1 (MQ=255) aaaaaaaCGGGCAAGTCAGTGACCTGCCCGTTGATTTTCAGAGAAGGGGAATTAGTACAGCAGACGGGCGCGAATGGTACCCGGAATAGCTTTCATTGcc < 1:533459/100‑1 (MQ=255) aaaaaaaCGGGCAAGTCAGTGACCTGCCCGTTGATTTTCAGAGAAGGGGAATTAGTACAGCAGACGGGCGCGAATGGTACCCGGAATAGCTTTCATTGcc > 1:2684899/1‑100 (MQ=255) aaaaaaaCGGGCAAGTCAGTGACCTGCCCGTTGATTTTCAGAGAAGGGGAATTAGTACAGCAGACGGGCGCGAATGGTACCCGGAATAGCTTTCATTGcc < 1:1006550/100‑1 (MQ=255) aaaaaaCGGGCAAGTCGTTGATCTGCCCGGGGAGCTTCAGAGAAGGGGAAGTAGTACAGCAGGCGGGCGCGAATGGTACCTGGAATAGCCTTCATTg < 2:1420494/97‑1 (MQ=255) aaaaaaCGGGCAAGTCAGTGACCTGCCTGTTGATTTTCAGAGAAGGGGAATTAGTACAGCAGACGGGCGCGCATGGTACCCGGAATAGCTTTCAt > 2:1302088/1‑95 (MQ=255) aaaaaaCGGGCAAGTCAGTGACCTGCCCGTTGATTTTCAGAGAAGGGGAATTAGTACAGCAGACGGGCGCGAATGGTACCCGGAATAGCTTTCATTGCCt > 2:3052909/1‑100 (MQ=255) tcaaCGGGCAGGTCACTGACTTGCCCGTTGATTTTCAGAGAAGGGGAATTAGTACAGCAGACGGGCGCGAATGGTACCCGGAATAGCTTTCATTGCCTGc > 2:1658409/3‑100 (MQ=38) caaCGGGCAGGTCACTGACTTGCCCGTTGATTTTCAGAGAAGGGGAATTAGTACAGCAGACGGGCGCGAATGGTACCCGGAATAGCTTTCATTGCCTGCa > 1:3486202/2‑100 (MQ=38) aaCGGGCAGGTCACTGACTTGCCCGTTGATTTTCAGAGAAGGGGAATTAGTACAGCAGACGGGCGCGAATGGTACCCGGAATAGCTTTCATTGCCTGCAg > 1:2502680/1‑100 (MQ=39) aCGGGCAGGTCACTGACTTGCCCGTTGATTTTCAGAGAAGGGTAGTTAGTACAGCAGACGGGCGCGAATGGTACCGGGAATAGCGTTCATTTCCTGCAgc > 2:343584/1‑100 (MQ=37) aCGGGCAGGTCACTGACTTGCCCGTTGATTTTCAGAGAAGGGGAATTAGTACAGCAGACGGGCGCGAATGGTACCCGGAATAGCTTTCATtgcatgca > 2:651101/1‑98 (MQ=38) aCGGGCAGGTCACTGACTTGCCCGTTGATTTTCAGAGAAGGGGAATTAGTACAGCAGACGGGCGCGAATGGTACCCGGAATAGCTTTCATTGCCTGCAgc > 1:463493/1‑100 (MQ=39) aCGGGCAAGTCAGTGACCTGCCCGTTGATTTTCAGAGAAGGGGAATTAGTACAGCAGACGGGCGCGAATGGTACCCGGAATAGCTTTCATTGCCTGCAgc > 2:180162/1‑100 (MQ=255) cGGGCAAGTCAGTGACCTGCCCGTTGATTTTCAGAGAAGGGGAATTAGTACAGCAGACGGGCGCGAATGGTACCCGGAATAGCTTTCATTGCCTGCAgcg < 2:2163714/100‑1 (MQ=255) gCAAGTCAGTGACCTGCCCGTTGATTTTCAGAGAAGGGGAATTAGTACAGCAGACGGGCGCGAATGGTACCCGGAATAGCGTTCATTGCCTGCAGCGCtt > 2:311473/1‑100 (MQ=255) aaGTCAGTGACCTGCCCGTTGATTTTCAGAGAAGGGGAATTAGTACAGCAGACGGGCGCGAATGGTACCCGGAATAGCTTTCATTGCCTGCAGCGCtttt > 1:2136652/1‑100 (MQ=255) aaGTCAGTGACCTGCCCGTTGATTGTCAGAGAAGGGGAATTAGTACAGCAGACGGGCGCGAATGGTACCCGGAATAGCTTTCATTGCCTGCAGCGCtttt > 2:2308417/1‑100 (MQ=255) tCAGTGACCTGCCCGTTGATTTTCAGAGAAGGGGAATTAGTACAGCAGTTGGGCGCGAATGGTGCCCGGAATAGCTTTCATTGCCTGCAGCGCTTTTTCg < 2:34023/100‑1 (MQ=255) tCAGTGACCTGCCCGTTGATTTTCAGAGAAGGGGAATTAGTACAGCAGACGGGCGCGAATGGTACCCGGAATAGCTTTCATTGCCTGCAGCGCTTTTTCg < 1:3527965/100‑1 (MQ=255) tCAGTGACCTGCCCGTTGATTTTCAGAGAAGGGGAATTAGTACAGCAGACGGGCGCGAATGGTACCCGGAATAGCTTTCATTGCCTGCAGCGCTTTTTCg < 1:523257/100‑1 (MQ=255) cAGTGACCTGCCCGTTGATTTTCAGAGAAGGGGAATTAGTACAGCAGACGGGCGCGAATGGTACCCGGAATAGCTTTCATTGCCTGCAGCGCTTTTTCgg < 1:2051331/100‑1 (MQ=255) cAGTGACCTGCCCGTTGATTTTCAGAGAAGGGGAATTAGTACAGCAGACGGGCGCGAATGGTACCCGGAATAGCTTTCATTGCCTGCAGCGCTTTTTCgg < 2:3331135/100‑1 (MQ=255) cAGTGACCTGCCCGTTGATTTTCAGAGAAGGGGAATTAGTACAGCAGACGGGCGCGAATGGTACCCGGAATAGCTTTCATTGCCTGCAGCGCTTTTTCgg < 2:2936915/100‑1 (MQ=255) gACCTGCCCGTTGATTTTCAGAGAAGGGGAATTAGTACAGCAGACGGGCGCGAATGGTACCCGGAATAGCTTTCATTGCCTGCAGCGCTTTTTCGGCa < 2:3234101/98‑1 (MQ=255) ccTGCCCGTTGATTTTCAGAGAAGGGGAATTAGTACAGCAGACGGGCGCGAATGGTACCCGGAATAGCTTTCATTGCCTGCAGCGCTTTTTCGGCAACGt > 1:3967921/1‑100 (MQ=255) | ATCTGACTTTGATTTATTTTCTGGAGCAGACTCGCAAAGTAGAATGCGCAACGCGGCAACGGTGTGGAGAAGGGAT‑AAAAAAACGGGCAAGTCAGTGACCTGCCCGTTGATTTTCAGAGAAGGGGAATTAGTACAGCAGACGGGCGCGAATGGTACCCGGAATAGCTTTCATTGCCTGCAGCGCTTTTTCGGCAACGTC > NC_000913/3057051‑3057249 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |