| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 3,469,544 | G→C | 49.9% | P104A (CCT→GCT) | chiA ← | periplasmic endochitinase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,469,544 | 0 | G | C | 49.9% | 3.7 / inf | 217 | P104A (CCT→GCT) | chiA | periplasmic endochitinase |
| Reads supporting (aligned to +/- strand): ref base G (62/46); new base C (54/54); total (117/100) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.39e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.91e-01 | |||||||||||
Only 100 of 223 total aligned reads displayed.
CCCTGCTGTTTATTCCAGGCAACTACAGAAGAATTAGACGGAACAGTGCCCTGTGCTGGTGTAGCCGAACCGCCATTAGCCGGCGTATTGGATGCAGGCGTATTTGAATTTGAAGAAGATGAGCTGCCGCTCTTTTCGCAGGAAAGTGTATTGCCAAACTGACTAATTTCAGCAGCTGTTGCGGTACGCTTTAAACG > NC_000913/3469447‑3469643 | gctgTTTATTCCAGGCAACTACAGAAGAATTAGACGGAACAGTGCCCTGTGCTGGTGTAGCCGAACCGCCATTAGCCGGCGTATTGGATGCAGCCGTatt < 1:2387519/100‑1 (MQ=255) ctttttATTCCAGGAAACAAAAGAAGAATTAGACGGAACAGTGCCCTGTGCTGGTGTAACCGAACCGCCATTAGACAGCGTATTGGAAGCAGCCGTatt < 2:185103/96‑1 (MQ=255) tgTTTATTCCAGGCAACTACAGAAGAATTAGACGGAACAGTGCCCTGTGCTGGTGTAGCCGAACCGCCATTAGCCGGCGTATTGGATGCAGGCGTatttg > 2:2380458/1‑100 (MQ=255) tgTTTATTCCAGGCAACTACAGAAGAATTAGACGGAACAGTGCCCTGTGCTGGTGTAGCCGAACCGCCATTAGCCGGCGTATTGGATGCAGGCGTatttg < 1:949694/100‑1 (MQ=255) gTTTATTCCAGGCAACTACAGAAGAATTAGACGGAACAGTGCCCTGTGCTGGTGTAGCCGAACCGCCATTAGCCGGCGTATTGGATGCAGCCGTatttga > 1:1405273/1‑100 (MQ=255) ttATTCCAGGCAACTACAGAAGAATTAGACGGAACAGTGCCCTGTGCTGGTGTAGCCGAACCGCCATTAGCCGGCGTATTGGATGCAGGCGTatttgaat > 2:45303/1‑100 (MQ=255) ttATTCCAGGCAACTACAGAAGAATTAGACGGAACAGTGCCCTGTGCTGGTGTAGCCGAACCGCCATTAGCCGGCGTATTGGATGCAGCCGTatttgaat < 1:183698/100‑1 (MQ=255) aTTCCAGGCAACTACAGAAGAATTAGACGGAACAGTGCCCTGTGCTGGTGTAGCCGAACCGCCATTAGCCGGCGTATTGGATGCAGGCGTatttgaattt > 2:3466474/1‑100 (MQ=255) tCCATGCAACTACAGAAGAATTAGACGGAACAGTGCCCTGTGCTGGTGTAGCCGAACCGCCATTAGCCGGCGTATTGGATGCAGGCGTatttgaatttga < 2:3551721/100‑1 (MQ=255) tCCAGGCAACTACAGAAGAATTAGACTGCACAGTGCCCTGTGCTGGTGTAGCCGAACCGCCATTAGCCGGCGTACTGGATGCAGCCGTattcgaatttga > 2:1581183/1‑100 (MQ=255) tCCAGGCAACTACAGAAGAATTAGACGTAACAGTGCCCTGTGCTGGTGTAGCCGAACCGCCATTAGCCGGCGTATTGGATGCAGCCGTatttgaatttga < 2:1657469/100‑1 (MQ=255) tCCAGGCAACTACAGAAGAATTAGACGGAACAGTGCCCTGTGCTGGTGTAGCCGAACCGCCATTAGCCGGCGTATTGGATGCAGCCGTatttgaatttga > 1:846755/1‑100 (MQ=255) ccAGGCAACTACAGAAGAATTAGACGGAACAGTGCCCTGTGCTGGTGTAGCCGAACCGCCATTAGCCGGCGTATTGGATGCAGGCGGAtttgaatttgaa > 2:197660/1‑100 (MQ=255) ccAGGCAACTACAGAAGAATTAGACGGAACAGTGCCCTGTGCTGGTGTAGCCGAACCGCCATTAGCCGGCGTATTGGATGCAGCCGTAtttgaatttgaa < 1:1763999/100‑1 (MQ=255) ccAGGCAACTACAGAAGAATTAGACGGAACAGTGCCCTGTGCTGGTGTAGCCGAACCGCCATTAGCCGGCGTATTGGATGCAGCCGTAtttgaatttgaa < 1:1293005/100‑1 (MQ=255) ctggCAACTACAGAAGAATTAGACGGAACAGTGCCCTGTGCTGGTGTAGCCGAACCGCCATTAGCCGGCGTATTGGATGCAGCCGTATTTGAATTTgaag > 1:2828179/3‑100 (MQ=255) cAGGCAACTACAGAAGAATTAGACGGAACAGTGCCCTGTGCTGGTGTAGCCGAACCGCCATTAGCCGGCGTATTGGATGCAGGCGTATTTGAATTTgaag < 1:1068476/100‑1 (MQ=255) cAGGCAACTACAGAAGAATTAGACGGAACAGTGCCCTGTGCTGGTGTAGCCGAACCGCCATTAGCCGGCGTATTGGATGCAGGCGTATTTGAATTTgaag > 1:1772425/1‑100 (MQ=255) cAGGCAACTACAGAAGAATTAGACGGAACAGTGCCCTGTGCTGGTGTAGCCGAACCGCCATTAGCCGGCGTATTGGATGCAGCCGTATTTGAATTTgaag > 2:191293/1‑100 (MQ=255) cAGGCAACTACAGAAGAATTAGACGGAACAGTGCCCTGTGCTGGTGTAGCCGAACCGCCATTAGCCGGCGTATTGGATGCAGCCGTATTTGAATTTgaag > 2:3427965/1‑100 (MQ=255) aGGCAACTACAGAAGAATTAGACGGAACAGTGCCCTGTGCTGGTGTAGCCGAACCGCCATTAGCCGGCGTATTGGATGCAGGCGTATTTGAATTTgaaga < 2:3194747/100‑1 (MQ=255) ggCAACTACAGAAGAATTAGACGGAACAGTGCCCTGTGCTGGTGTAGCCGAACCGCCATTAGCCGGCGTATTGGATGCAGGCGTATTTGAATTTgaagaa > 1:1704889/1‑100 (MQ=255) ggCAACTACAGAAGAATTAGACGGAACAGTGCCCTGTGCTGGTGTAGCCGAACCGCCATTAGCCGGCGTATTGGATGCAGGCGTATTTGAATTTgaagaa > 1:264669/1‑100 (MQ=255) ggCAACTACAGAAGAATTAGACGGAACAGTGCCCTGTGCTGGTGTAGCCGAACCGCCATTAGCCGGCGTATTGGATGCAGGCGTATTTGAATTTgaagaa > 1:2505688/1‑100 (MQ=255) aaCTACAGAAGAATTAGACGGAACAGTGCCCTGTGCTGGTGTAGCCGAACCGCCATTAGCCGGCGTATTGGATGCAGCCGTATTTGAATTTGAagaagag > 2:2954571/1‑99 (MQ=255) tACAGAAGAATTAGACGGAACAGTGCCCTGTGCTGGTGTAGCCGAACCGCCATTAGCCGGCGTATTGGATGCAGCCGTATTTGAATTTGAAGAAGATGAg < 2:2452375/100‑1 (MQ=255) aCAGAAGAATTAGACGGAACAGTGCCCTGTGCTGGTGTAGCCGAACCGCCATTAGCCGGCGTATTGGATGCAGGCGTATTTGAATTTGAAGAAGATGAGc > 1:3194889/1‑100 (MQ=255) agaagaATAAGACGGAACTGTGCCCTGTGCTGGTGTAGCCCAACCTCCATACGCCCGCGTCTTCGATCCAGCCTTCCTCGAAGTTGAAGAAGATCAGCTg > 2:67665/1‑100 (MQ=255) gaagaaTTAGACGGAACAGTGCCCTGTGCTGGTGTAGCCGAACCGCCATTAGCCGGCGTATTGGATGCAGCCGTATTTGAATTTGAAGAAGATGAGCTGc > 1:2098308/1‑100 (MQ=255) nagaaTTAGACGGAACAGTGCCCTGTGCTGGTGTAGCCGAACCGCCATTAGCCGGCGTATTGGATGCAGGCGTATTTGAATTTGAAGAAGATGAGCTGcc > 1:3787940/2‑100 (MQ=255) aagaaTTAGACGGAACAGTGCCCTGTGCTGGTGTAGCCGAACCGCCATTAGCCGGCGTATTGGATGCAGCCGTATTTGAATTTGAAGAAGATGAGCTGcc < 1:1692475/100‑1 (MQ=255) aagaaTTAGACGGAACAGTGCCCTGTGCTGGTGTAGCCGAACCGCCATTAGCCGGCGTATTGGATGCAGCCGTATTTGAATTTGAAGAAGATGAGCTGcc < 2:1259951/100‑1 (MQ=255) agaaTTAGACGGAACAGTGCCCTGTGCTGGTGTAGCCGAACCGCCATTAGCCGGCGTATTGGATGCAGGCGTATTTGAATTTGAAGAAGATGAGCTGCCg > 1:3558723/1‑100 (MQ=255) aTTAGACGGAACAGTGCCCTGTGCTGGTGTAGCCGAACCGCCATTAGCCGGCGTATTGGATGCAGCCGTATTTGAATTTGAAGAAGATGAGCTGCCGctc > 1:3725251/1‑100 (MQ=255) aGACGGAACAGTGCCCTGTGCTGGTGTAGCCGAACCGCCATTAGCCGGCGTATTGGATGCAGGCGTATTTGAATTTGAAGAAGATGAGCTGCCGCTCttt > 1:2051634/1‑100 (MQ=255) cGGAACAGTGCCCTGTGCTGGTGTAGCCGAACCGCCATTAGCCGGCGTATTGGATGCAGGCGTATTTGAATTTGAAGAAGATGAGCTGCCGCTCTTTTCg > 2:482756/1‑100 (MQ=255) ggAACAGTGCCCTGTGCTGGTGTAGCCGAACCGCCATTAGCCGGCGTATTGGATGCAGGCGTATTTGAATTTGAAGAAGATGAGCTGCCGCTCTTTTCGc < 1:3424537/100‑1 (MQ=255) ggAACAGTGCCCTGTGCTGGTGTAGCCGAACCGCCATTAGCCGGCGTATTGGATGCAGCCGTATTTGAATTTGAAGAAGATGAGCTGCCGCTCTTTTCGc < 2:2880273/100‑1 (MQ=255) gAACAGTGCCCTGTGCTGGTGTAGCCGAACCGCCATTAGCCGGCGTATTGGATGCAGGCGTATTTGAATTTGAAGAAGATGAGCTGCCGCTCTTTTCGCa < 2:4049956/100‑1 (MQ=255) aaCAGTGCCCTGTGCTGGTGTAGCCGAACCGCCATTAGCCGGCGTATTGGATGCAGCCGTATTTGAATTTGAAGAAGATGAGCTGCCGCTCTTTTCGCAg > 2:3837774/1‑100 (MQ=255) aCAGTGCCCTGTGCTGGTGTAGCCGAACCGCCATTAGCCGGCGTATTGGATGCAGGCGTATTTGAATTTGAAGAAGATGAGCTGCCGCTCTTTTCGCAgg < 2:1772413/100‑1 (MQ=255) aCAGTGCCCTGTGCTGGTGTAGCCGAACCGCCATTAGCCGGCGTATTGGATGCAGGCGTATTTGAATTTGAAGAAGATGAGCTGCCGCTCTTTTCGCAgg > 2:2727688/1‑100 (MQ=255) cAGTGCCCTGTGCTGGTGTAGCCGAACCGCCATTAGCCGGCGTATTGGATGCAGGCGTATTTGAATTTGAAGAAGATGAGCTGCCGCTCTTTTCGCAGGa < 2:1360486/100‑1 (MQ=255) gTGCCCTGTGCTGGTGTAGCCGAACCGCCATTAGCCGGCGTATTGGATGCAGCCGTATTTGAATTTGAAGAAGATGAGCTGCCGCTCTTTTCGCAGGaaa > 1:2729837/1‑100 (MQ=255) gCCCTGTGCTGGTGTAGCCGAACCGCCATTAGCCGGCGTATTGGATGCAGGCGTATTTGAATTTGAAGAAGATGAGCTGCCGCTCTTTTCGCAGGAAAgt > 2:256030/1‑100 (MQ=255) cccTGTGCTGGTGTAGCCGAACCGCCATTAGCCGGCGTATTGGATGCAGGCGTATTTGAATTTGAAGAAGATGAGCTGCCGCTCTTTTCGCAGGAAAgtg < 1:437087/100‑1 (MQ=255) cTGTGCTGGTGTAGCCGAACCGCCATTAGCCGGCGTATTGGATGCAGGCGTATTTGAATTTGAAGAAGATGAGCTGCCGCTCTTTTCGCAGGAAAGTGTa < 1:2194623/100‑1 (MQ=255) tgtgCTGGTGTAGCCGAACCGCCATTAGCCGGCGTATTGGATGCAGCCGTATTTGAATTTGAAGAAGATGAGCTGCCGCTCTTTTCGCAGGAAAGTGTAt > 2:3299624/1‑100 (MQ=255) gtgCTGGTGTAGCCGAACCGCCATTAGCCGGCGTATTGGATGCAGCCGTATTTGAATTTGAAGAAGATGAGCTGCCGCTCTTTTCGCAGGAAAGTGTAtt > 1:3382237/1‑100 (MQ=255) tgCTGGTGTAGCCGAACCGCCATTAGCCGGCGTATTGGATGCAGGCGTATTTGAATTTGAAGAAGATGAGCTGCCGCTCTTTTCGCAGGAAAGTGTATTg < 1:599647/100‑1 (MQ=255) gtgtAGCCGAACCGCCATTAGCCGGCGTATTGGATGCAGGCGTATTTGAATTTGAAGAAGATGAGCTGCCGCTCTTTTCGCAGGAAAGTGTATTGCCaa > 2:3313433/1‑99 (MQ=255) gtgtAGCCGAACCGCCATTAGCCGGCGTATTGGATGCAGCCGTATTTGAATTTGAAGAAGATGAGCTGCCGCTCTTTTCGCAGGAAAGTGTATTGCCaaa > 2:151635/1‑100 (MQ=255) tAGCCGAACCGCCATTAGCCGGCGTATTGGATGCAGCCGTATTTGAATTTGAAGAAGATGAGCTGCCGCTCTTTTCGCAGGAAAGTGTATTGCCAAACTg < 1:491137/100‑1 (MQ=255) tAGCCGAACCGCCATTAGCCGGCGTATTGGATGCAGCCGTATTTGAATTTGAAGAAGATGAGCTGCCGCTCTTTTCGCAGGAAAGTGTATTGCCAAACTg < 1:1375323/100‑1 (MQ=255) gCCGAACCGCCATTAGCCGGCGTATTGGATGCAGGCGTATTTGAATTTGAAGAAGATGAGCTGCCGCTCTTTTCGCAGGAAAGTGTATTGCCAAACTGAc > 1:261238/1‑100 (MQ=255) gCCGAACCGCCATTAGCCGGCGTATTGGATGCAGCCGTATTTGAATTTGAAGAAGATGAGCTGCCGCTCTTTTCGCAGGAAAGTGTATTGCCAAACTGAc < 1:252135/100‑1 (MQ=255) ccGAACCGCCATTAGCCGGCGTATTGGATGCAGGCGTATTTGAATTTGAAGAAGATGAGCTGCCGCTCTTTTCGCAGGAAAGTGTATTGCCAAACTGACt > 1:1613755/1‑100 (MQ=255) ccGAACCGCCATTAGCCGGCGTATTGGATGCAGCCGTATTTGAATTTGAAGAAGATGAGCTGCCGCTCTTTTCGCAGGAAAGTGTATTGCCAAACTGACt > 2:962546/1‑100 (MQ=255) gAACCGCCATTAGCCGGCGTATTGGATGCAGCCGTATTTGAATTTGAAGAAGATGAGCTGCCGCTCTTTTCGCAGGAAAGTGTATTGCCAAACTGACTaa > 1:1547087/1‑100 (MQ=255) ccGCCATTAGCCGGCGTATTGGATGCAGCCGTATTTGAATTTGAAGAAGATGAGCTGCCGCTCTTTTCGCAGGAAAGTGTATTGCCAAACTGACTAAttt > 1:2174451/1‑100 (MQ=255) cGCCATTAGCCGGCGTATTGGATGCAGGCGTATTTGAATTTGAAGAAGATGAGCTGCCGCTCTTTTCGCAGGAAAGTGTATTGCCAAACTGACTAATTTc < 2:1093822/100‑1 (MQ=255) cGCCATTAGCCGGCGTATTGGATGCAGCCGTATTTGAATTTGAAGAAGATGAGCTGCCGCTCTTTTCGCAGGAAAGTGTATTGCCAAACTGACTAATTTc < 2:3266649/100‑1 (MQ=255) gCCATTAGCCGGCGGCTGGGCTGCAGCCGTATTTGAATTTGACGAAGATGACCTGCAGCTCTTTTCGGAGGAAAGTGTATCGCCAAACTGACTATTTTca > 2:1318843/1‑100 (MQ=255) ccATTAGCCGGCGTATTGGATGCAGGCGTATTTGAATTTGAAGAAGATGAGCTGCCGCTCTTTTCGCAGGAAAGTGTATTGCCAAACTGACTAATTTcag > 2:3734512/1‑100 (MQ=255) ccATTAGCCGGCGTATTGGATGCAGCCGTATTTGAATTTGAAGAAGATGAGCTGCCGCTCTTTTCGCAGGAAAGTGTATTGCCAAACTGACTAATTTcag < 1:463083/100‑1 (MQ=255) cATTAGCCGGCGTATTGGATGCAGGCGTATTTGAATTTGAAGAAGATGAGCTGCCGCTCTTTTCGCAGGAAAGTGTATTGCCAAACTGACTAATTTcagc < 2:1254058/100‑1 (MQ=255) cATTAGCCGGCGTATTGGATGCAGCCGTATTTGAATTTGAAGAAGATGAGCTGCCGCTCTTTTCGCAGGAAAGTGTATTGCCAAACTGACTAATTTcagc > 1:1009248/1‑100 (MQ=255) cATTAGCCGGCGTATTGGATGCAGCCGTATTTGAATTTGAAGAAGATGAGCTGCCGCTCTTTTCGCAGGAAAGTGTATTGCCAAACTGACTAATTTcagc < 2:1681580/100‑1 (MQ=255) cATTAGCCGGCGTATTGGATGCAGCCGTATTTGAATTTGAAGAAGATGAGCTGCCGCTCTTTTCGCAGGAAAGTGTATTGCCAAACTGACTAATTTcagc < 1:2013050/100‑1 (MQ=255) ttAGCCGGCGTATTGGATGCAGGCGTATTTGAATTTGAAGAAGATGAGCTGCCGCTCTTTTCGCAGGAAAGTGTATTGCCAAACTGACTAATTTcagcag < 1:2365612/100‑1 (MQ=255) tAGCCGGCGTATTGTATGCAGCCGTATTTGAATTTGAAGAAGATGATCTGCCGCTCTTTTCGCAGGAAAGTGTATTGCCAAACTGACTAATTTCagcagc < 2:769521/100‑1 (MQ=255) aGCCGGCGTATTGGATGCAGGCGTATTTGAATTTGAAGAAGATGAGCTGCCGCTCTTTTCGCAGGAAAGTGTATTGCCAAACTGACTAATTTCAGCAGCt > 1:3033226/1‑100 (MQ=255) gCCGGCGTATTGGATGCAGGCGTATTTGAATTTGAAGAAGATGAGCTGCCGCTCTTTTCGCAGGAAAGTGTATTGCCAAACTGACTAATTTCAGCAGCTg < 1:1108996/100‑1 (MQ=255) gCCGGCGTATTGGATGCAGGCGTATTTGAATTTGAAGAAGATGAGCTGCCGCTCTTTTCGCAGGAAAGTGTATTGCCAAACTGACTAATTTCAGCAGCTg > 1:1239222/1‑100 (MQ=255) gCCGGCGTATTGGATGCAGGCGTATTTGAATTTGAAGAAGATGAGCTGCCGCTCTTTTCGCAGGAAAGTGTATTGCCAAACTGACTAATTTCAGCAGCTg < 1:886575/100‑1 (MQ=255) gCCGGCGTATTGGATGCAGCCGTATTTGAATTTGAAGAAGATGAGCTGCCGCTCTTTTCGCAGGAAAGTGTATTGCCAAACTGACTAATTTCAGCAGCTg > 2:1722358/1‑100 (MQ=255) ccGGCGTATTGGATGCAGGCGTATTTGAATTTGAAGAAGATGAGCTGCCGCTCTTTTCGCAGGAAAGTGTATTGCCAAACTGACTAATTTCAGCAGCTGt > 1:2336908/1‑100 (MQ=255) ggCGTATTGGATGCAGCCGTATTTGAATTTGAAGAAGATGAGCTGCCGCTCTTTTCGCAGGAAAGTGTATTGCCAAACTGACTAATTTCAGCAGCTGTTg > 1:1919918/1‑100 (MQ=255) ttccgatctaTGCAGCCGTATTTGAATTTGAAGAAGATGAGCTGCCGCTCTTTTCGCAGGAAAGTGTATTGCCAAACTGACTAATTTCAGCAGCTGTTGc < 1:4090111/91‑1 (MQ=255) gCGTATTGGATGCAGCCGTATTTGAATTTGAAGAAGATGAGCTGCCGCTCTTTTCGCAGGAAAGTGTATTGCCAAACTGACTAATTTCAGCAGCTGTTGc < 2:3212666/100‑1 (MQ=255) cGTATTGGATGCAGGCGTATTTGAATTTGAAGAAGATGAGCTGCCGCTCTTTTCGCAGGAAAGTGTATTGCCAAACTGACTAATTTCAGCAGCTGTTGCg > 2:804941/1‑100 (MQ=255) cGTATTGGATGCAGCCGTATTTGAATTTGAAGAAGATGAGCTGCCGCTCTTTTCGCAGGAAAGTGTATTGCCAAACTGACTAATTTCAGCAGCTGTTGCg < 2:3767132/100‑1 (MQ=255) aTTGGATGCAGCCGTATTTGAATTTGAAGAAGATGAGCTGCCGCTCTTTTCGCAGGAAAGTGTATTGCCAAACTGACTAATTTCAGCAGCTGTTGCgg > 2:3574726/1‑98 (MQ=255) aTTGGATGCAGCCGTATTTGAATTTGAAGAAGATGAGCTGCCGCTCTTTTCGCAGGAAAGTGTATTGCCAAACTGACTAATTTCAGCAGCTGTTGCGGTa < 1:582919/100‑1 (MQ=255) ttGGATGCAGGCGTATTTGAATTTGAAGAAGATGAGCTGCCGCTCTTTTCGCAGGAAAGTGTATTGCCAAACTGACTAATTTCAGCAGCTGTTGCGGTAc < 1:535433/100‑1 (MQ=255) ttGGATGCAGCCGTATTTGAATTTGAAGAAGATGAGCTGCCGCTCTTTTCGCAGGAAAGTGTATTGCCAAACTGACTAATTTCAGCAGCTGTTGCGGTAc < 2:4083152/100‑1 (MQ=255) ggATGCAGGCGTATTTGAATTTGAAGAAGATGAGCTGCCGCTCTTTTCGCAGGAAAGTGTATTGCCAAACTGACTAATTTCAGCAGCTGTTGCGGTACGc < 1:3290248/100‑1 (MQ=255) ggATGCAGCCGTATTTGAATTTGAAGAAGATGAGCTGCCGCTCTTTTCGCAGGAAAGTGTATTGCCAAACTGACTAATTTCAGCAGCTGTTGCGGTACGc < 2:3545665/100‑1 (MQ=255) ggATGCAGCCGTATTTGAATGTGAAGAAGATGAGCTGCCGCTCTTTTCGCAGGAAAGTGTATTGCCAAACTGACTAATTTCAGCAGCTGTTGCGGTACGc > 2:2532839/1‑100 (MQ=255) gATGCAGCCGTATTTGAATTTGAAGAAGATGAGCTGCCGCTCTTTTCGCAGGAAAGTGTATTGCCAAACTGACTAATTTCAGCAGCTGTTGCGGTACGCt > 1:2516039/1‑100 (MQ=255) tGCAGGCGTATTTGAATTTGAAGAAGATGAGCTGCCGCTCTTTTCGCAGGAAAGTGTATTGCCAAACTGACTAATTTCAGCAGCTGTTGCGGTACGCttt > 1:773998/1‑100 (MQ=255) tGCAGGCGTATTTGAATTTGAAGAAGATGAGCTGCCGCTCTTTTCGCAGGAAAGTGTATTGCCAAACTGACTAATTTCAGCAGCTGTTGCGGTACGCttt > 2:3628277/1‑100 (MQ=255) tGCAGGCGTATTTGAATTTGAAGAAGATGAGCTGCCGCTCTTTTCGCAGGAAAGTGTATTGCCAAACTGACTAATTTCAGCAGCTGTTGCGGTACGCttt < 2:2185706/100‑1 (MQ=255) tGCAGCCGTATTTGAATTTGAAGAAGATGAGCTGCCGCTCTTTTCGCAGGAAAGTGTATTGCCAAACTGACTAATTTCAGCAGCTGTTGCGGTACGCttt > 2:1828063/1‑100 (MQ=255) ggCGTATTTGAATTTGAAGAAGATGAGCTGCCGCTCTTTTCGCAGGAAAGTGTATTGCCAAACTGACTAATTTCAGCAGCTGTTGCGGTACGCTTTAAAc < 1:2692506/100‑1 (MQ=255) gCGTATTTGAATTTGAAGAAGATGCGCTGCCGCTCTTTTCGGAGGAAAGTGTATTGCCAAACTGACTAAGTTCAGCAGCTGTTGCGGTACGCTTTAAACg < 2:3889505/100‑1 (MQ=255) gCGTATTTGAATTTGAAGAAGATGAGCTGCCGCTCTTTTCGCAGGAAAGTGTATTGCCAAACTGACTAATTTCAGCAGCTGTTGCGGTACGCTTTAAAca > 1:672448/1‑99 (MQ=255) gCGTATTTGAATTTGAAGAAGATGAGCTGCCGCTCTTTTCGCAGGAAAGTGTATTGCCAAACTGACTAATTTCAGCAGCTGTTGCGGTACGCTTTAAACg < 1:383120/100‑1 (MQ=255) gCGTATTTGAATTTGAAGAAGATGAGCTGCCGCTCTTTTCGCAGGAAAGTGTATTGCCAAACTGACTAATTTCAGCAGCTGTTGCGGTACGCTTTAAACg < 2:1753466/100‑1 (MQ=255) gCGTATTTGAATTTGAAGAAGATGAGCTGCCGCTCTTTTCGCAGGAAAGTGTATTGCCAAACTGACTAATTTCAGCAGCTGTTGCGGTACGCTTTAAACg < 2:3033207/100‑1 (MQ=255) | CCCTGCTGTTTATTCCAGGCAACTACAGAAGAATTAGACGGAACAGTGCCCTGTGCTGGTGTAGCCGAACCGCCATTAGCCGGCGTATTGGATGCAGGCGTATTTGAATTTGAAGAAGATGAGCTGCCGCTCTTTTCGCAGGAAAGTGTATTGCCAAACTGACTAATTTCAGCAGCTGTTGCGGTACGCTTTAAACG > NC_000913/3469447‑3469643 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |