| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 3,706,048 | G→T | 28.2% | intergenic (‑258/+50) | dppB ← / ← dppA | dipeptide/heme ABC transporter permease/dipeptide/heme ABC transporter periplasmic binding protein; dipeptide chemotaxis receptor |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,706,048 | 0 | G | T | 28.2% | 601.4 / 228.5 | 313 | intergenic (‑258/+50) | dppB/dppA | dipeptide/heme ABC transporter permease/dipeptide/heme ABC transporter periplasmic binding protein; dipeptide chemotaxis receptor |
| Reads supporting (aligned to +/- strand): ref base G (76/141); new base T (64/18); total (153/160) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.59e-11 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.59e-01 | |||||||||||
Only 100 of 321 total aligned reads displayed.
TGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GAAT‑‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGTGATGTTTGCCTAATGGATCAACCA > NC_000913/3705949‑3706147 | tGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GAAT‑‑TTTC‑‑GTAGGCCTGATAAGCgg < 1:3476098/100‑1 (MQ=255) gcgcTTTGTTTATGCCGGATTCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GAAT‑‑TTTC‑‑GTAGGCCTGATAAGCGGa > 2:2524683/1‑100 (MQ=255) gcgcTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GAAT‑‑TTTC‑‑GTAGGCCTGATAAGCGGa < 1:542938/100‑1 (MQ=255) gcgcTTGGTGGATGCCGTAGGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GCAT‑‑TTTC‑‑GTAGGTATGATAAGCgg < 2:3865933/99‑1 (MQ=17) cgcTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GAAT‑‑TTTC‑‑GTAGGCCTGATAAGCGGAg < 2:685038/100‑1 (MQ=255) gcTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GAAT‑‑TTTC‑‑GTAGGCCTGATAAGCGGAgc > 1:3551034/1‑100 (MQ=255) gcTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GAAT‑‑TTTC‑‑GTAGGCCTGATAAGCGGAgc < 1:1844845/100‑1 (MQ=255) cTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GAAT‑‑TTTC‑‑GTAGGCCTGATAAGCGGAgcg > 1:2337018/1‑100 (MQ=255) cTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GAAT‑‑TTTC‑‑GTAGGCCTGATAAGCGGAgcg > 1:2234460/1‑100 (MQ=255) gttttgtaggCCGGATAAGGCGTTCACGCCGCATCCGGCCTAC‑AAAACTGTGCAAATTCAATATATTGCA‑GGAA‑‑ACAC‑‑GTAGGCCTGATAAGCGAAgcgc > 1:28312/10‑100 (MQ=18) ttGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GAAT‑‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCa < 1:635910/100‑1 (MQ=255) atttgtaggCCGGATAAGGCGTTTACGCCGCATCTGGCCTAC‑AAATTCTTCCAAATTCAATATATTGCA‑GAAA‑‑TCAT‑‑GTAGGCCTGATAAGCGTAGCGCa > 1:253299/9‑100 (MQ=18) tttgtaggCCGGATAAGGCGTTCACGCCGCATCCGGCCTAC‑AAAAACCTGCAAATTCAATATATTGCA‑GGAT‑‑ACGT‑‑GTAGGCCTGATAAGCGTAGCGCAt > 1:3894808/8‑100 (MQ=18) tttATGCCGGATGCGTCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GAAT‑‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCa < 1:4070090/100‑1 (MQ=255) tttATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GAAT‑‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCa > 1:3654130/1‑100 (MQ=255) tgtaggCCGGATAAGGCGTTCACGCCGCATCCGGCCTACAAAAATCTTGCCAATTCAATATATTGCA‑GGAC‑‑CAT‑‑‑GTAGGCCTGATAAGCGTAGCGCATCa > 2:586815/6‑100 (MQ=18) gtaggCCGGATAAGGCGTTCACGCCGCATCCGGCCTAC‑GAAATCGTGCTAATTCAATATATTGTG‑GGCT‑‑CCAC‑‑GTAGGCCTGATAAGCGTAGCGCATCAg > 2:452644/5‑100 (MQ=21) gtaggCCGGATAAGGCGTTCACGCCGCATCCGGCCTAC‑AAAATCATGAAAATTCAATACATTGCA‑AGAT‑‑TTTC‑‑GTAGGCCTGATAAGCGTAGCGCATCAg > 2:2685580/5‑100 (MQ=17) gtaggCCGGATAAGGCGTTCACGCCGCATCCGGCATAC‑AAAGTCGTATAAATTCAATGTATTGCA‑GTTT‑‑ATTG‑‑GTAGGCCTGATAAGCGCAGCGCATCAg > 1:2081561/5‑100 (MQ=21) gtaggCCGGATAAGGCGTTAACGCCGCATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GAAT‑‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAg > 2:368802/5‑100 (MQ=18) tATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GAAT‑‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAgg < 1:92434/100‑1 (MQ=255) tATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GAAT‑‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAgg < 2:2747110/100‑1 (MQ=255) tATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GAAT‑‑TTAC‑‑GTAGGCCTGATAAGCGGAGCGCATCAg > 2:2564800/1‑99 (MQ=255) aggCCGGATAAGGCGTTCACGCCGCATCCGGCCTAC‑AAAACCTTGCTAATTCAATATATTGCAGGGAC‑‑TAT‑‑‑GTAGGCCTGATAAGCATAGCGCATCAGGc > 2:2992827/3‑100 (MQ=18) aggCCGGATAAGGCGTTCACGCCGCATCCGGCCTAC‑AAAACCTTGCTAATTCAATATATTGCA‑GGGA‑‑CTAT‑‑GTAGGCCTGATAAGCATAGCGCATCAGGc > 1:3151707/3‑100 (MQ=18) aggCCGGATAAGGCGTTCACGCCGCATCCGGCCTAC‑AAAAACCTGCAAATTCAATATATTGCA‑GGAT‑‑ACGT‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGc > 1:3217352/3‑100 (MQ=18) ggCCGGATAAGGCGTTTACGCCGCATCCGGCCTAC‑AAAAATGTGCAAATTCAATAAATTGCA‑‑ATTCAACTT‑‑GTAGGCCTGATAAGCGCAGCGCATCAGGc > 1:1037291/2‑100 (MQ=18) ggCCGGATAAGGCGTTCACGCCGCATCCGGCCTACAAAAATCTTGCCAATTCAATATATTGCA‑GGAC‑‑CAT‑‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGCa > 1:1277254/2‑100 (MQ=18) ggCCGGATAAGGCGTTCACGCCGCATCCGGCCTAC‑AAAGTCGTATAAATTCAATGTATTGCA‑GTTT‑‑ATTG‑‑GTAGGCCTGATAAGCGCAGCGCATCAGGCa > 1:1462990/2‑100 (MQ=21) ggCCGGATAAGGCGTTCACGCCGCATCCGGCCTAC‑AAAACTTTGCAAATTCAATATATTGC‑‑‑AAT‑‑CTCCGTGTAGGCCTGATAAGCGTAGCGCATCAGGCa > 1:3000158/2‑100 (MQ=18) ggCCGGATAAGGCGTTCACGCCGCATCCGGCCTAC‑AAAAACCTGCAAATTCAATATATTGCA‑GGAT‑‑ACGT‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGCa > 2:4063685/2‑100 (MQ=18) ggCCGGATAAGGCGTTCACGCCGCATCCGGCCTAC‑‑AAATCATGCAAATCCAAAATATTGCA‑GGAG‑‑TTAT‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGCAt > 2:2929945/2‑100 (MQ=21) gCCGGATAAGGCGTTCACGCCGCATCCGGCCTACAAAAATCTTGCCAATTCAATATATTGCA‑GGAC‑‑CAT‑‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGCag > 1:2663455/1‑99 (MQ=18) gCCGGATAAGGCGTTCACGCCGCATCCGGCCTAC‑AAGATCGTGCAAATTCAATATATTGCA‑TGAG‑‑CCAC‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGCag > 2:1063557/1‑99 (MQ=17) gCCGGATAAGGCGTTCACGCCGCATCCGGCCTAC‑AAAAGCATGAAAATTCAATATATTGCA‑GGAG‑‑CTGC‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGCag > 1:1226572/1‑99 (MQ=17) gCCGGATAAGGCGTTCACGCCGCATCCGGCCTAC‑AAAACTGTGCAAATTCAATATATTGCA‑GGAA‑‑ACAC‑‑GTAGGCCTGATAAGCGAAGCGCATCAGGCag > 2:383007/1‑99 (MQ=18) gCCGGATAAGGCGTTAACGCCGCATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GAAT‑‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCAt > 1:2356037/1‑100 (MQ=18) tggataaggcgTTCACGCCGCATCCGGCCTAC‑AAAGTCGTATAAATTCAATGTATTGCA‑GTTT‑‑ATTG‑‑GTAGGCCTGATAAGCGCAGCGCATCAGGCaatc < 1:3426685/93‑4 (MQ=25) cggataaggcgTTCACGCCGCATCCGGCCTAC‑AAAAGCATGAAAATTCAATATATTGCA‑GGAG‑‑CTGC‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGCAgtt > 2:3637288/8‑100 (MQ=17) ggataaggcgTTTACGCCGCATCCGGCCTAC‑AAAATCGTGCTAATTCAATATATTGCA‑GAAA‑‑CCTT‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGCAgttt > 2:2875162/7‑100 (MQ=18) ggataaggcgTTTACGCCGCATCCGGCCTAC‑AAAAGCATGCAAATTCAATATATTGCA‑GAGT‑‑TCAC‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGCAgttt > 1:2021854/7‑100 (MQ=17) ggataaggcgTTCACGCCGCATCCGGCCTACAAAAATCTTGCCAATTCAATATATTGCA‑GGAC‑‑CAT‑‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGCAgttt > 2:875970/7‑100 (MQ=18) ggataaggcgTTCACGCCGCATCCGGCCTAC‑AAAGTCGTATAAATTCAATGTATTGCA‑GTTT‑‑ATTG‑‑GTAGGCCTGATAAGCGCAGCGCATCAGGCaatct > 2:3104334/7‑96 (MQ=25) ggataaggcgTTCACGCCGCATCCGGCCTAC‑‑AAATCATGCAAATCCAAAATATTGCA‑GGAG‑‑TTAT‑‑GTAGGCCTGATAAGCGTAGCGCATCAGGCAtttat > 2:2104867/7‑98 (MQ=21) ggATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GAAT‑‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCAtttt > 1:878592/1‑100 (MQ=255) gataaggcgTTCACGCCGCATCCGGCCTAC‑AAAACTGTGCAAATTCAATATATTGCA‑GGAA‑‑ACAC‑‑GTAGGCCTGATAAGCGAAGCGCATCAGGCAgtttt > 1:3978452/6‑100 (MQ=18) aTGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GAAT‑‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTtttg < 1:2634783/100‑1 (MQ=255) gcggcgTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GAAT‑‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTtttgcc < 1:694945/100‑1 (MQ=255) cggcgTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCACTACATTGCA‑GAAT‑‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATGcttgcct > 2:4120221/1‑100 (MQ=255) cggcgTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GAAT‑‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTtttgcct > 1:39669/1‑100 (MQ=255) cggcgTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GAAT‑‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTtttgcct > 1:959821/1‑100 (MQ=255) cgTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GAAT‑‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTtttgcctttg < 1:3804816/100‑1 (MQ=255) cgTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GAAT‑‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTtttgcctttg > 2:1152345/1‑100 (MQ=255) ttAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GAAT‑‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTtttgcctttgcc < 1:1509777/100‑1 (MQ=255) ttAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GAAT‑‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTtttgcctttgcc < 1:794578/100‑1 (MQ=255) gCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GAAT‑‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATctg > 2:2496787/1‑98 (MQ=255) tATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GAAT‑‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCtt > 1:3398643/1‑100 (MQ=255) aTCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GAAT‑‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTg < 2:800362/100‑1 (MQ=255) aTCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GAAT‑‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTg < 1:2306532/100‑1 (MQ=255) ggCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GAAT‑‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATg < 2:2202202/100‑1 (MQ=255) ccTAC‑AAAATCGTGCTAATTCAATACATTGCA‑GAAT‑‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATgg < 2:2418874/99‑1 (MQ=255) ccTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GAAT‑‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGc < 2:1336299/100‑1 (MQ=255) ccTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GAAT‑‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGc < 2:4040525/100‑1 (MQ=255) c‑AAAATCGTGCAAATTCAATACATTGCA‑GAAT‑‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCtttt < 1:2601241/100‑1 (MQ=255) cGTGCAAATTCAATACATTGCA‑GAAT‑‑TTTC‑‑GTAGGCCTTATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAattat < 1:1184777/100‑1 (MQ=255) cGTGAAAATGCAATAAATTGCA‑TCAT‑‑CTTC‑‑TTAGCCTTGTTAAGCGGAGCTCATCAGGCATTTTTGCCTTTCCCATCAGTCCTGTATGGCTTTTAatt < 2:1721596/98‑1 (MQ=255) gTGCAAATTCAATACATTGCA‑GAAT‑‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAattatt < 2:2337005/100‑1 (MQ=255) tGCAAATTCAATACATTGCA‑GAAT‑‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTc > 2:1454734/1‑100 (MQ=255) tGCAAATTCAATACATTGCA‑GAAT‑‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTc > 1:1909469/1‑100 (MQ=255) gCAAATTCAATACATTGCA‑GAAT‑‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCg < 2:3551011/100‑1 (MQ=255) cAAATTCAATACATTGCA‑GAAT‑‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGa < 2:1530810/100‑1 (MQ=255) aaTTCAATACATTGCA‑GAAT‑‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGAtn < 1:3333189/100‑2 (MQ=255) aTTCAATACATTGCA‑GAAT‑‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATag < 1:1107641/100‑1 (MQ=255) ttCAATACATTGCA‑GAAT‑‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGAt < 2:1251386/97‑1 (MQ=255) aTACATTGCA‑GAAT‑‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACg < 2:1852365/100‑1 (MQ=255) cATTGCA‑GACT‑‑TTTC‑‑GTCGGCCTGATAAGCGGCGCGCATCAGTCATTTTTGCCTTTGCCATCAGTCCTGTACGGCCTTTAATTATTCGATAGAGATGttt > 2:1966019/1‑100 (MQ=255) ttGCA‑GAAT‑‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTc > 1:3267176/1‑100 (MQ=255) tGCA‑GAAT‑‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCg < 2:3223579/100‑1 (MQ=255) a‑GAAT‑‑TTTC‑‑GTAGGCCTGTTAAGCGGAGCGCATCAGGCATTTTTGGCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAg < 2:1796508/100‑1 (MQ=255) gAAT‑‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGt > 2:1766039/1‑100 (MQ=255) gAAT‑‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGt < 1:1939843/100‑1 (MQ=255) gAAT‑‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGt > 1:2952919/1‑100 (MQ=255) t‑‑tttC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGTGAt < 1:1424498/100‑1 (MQ=255) tttC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCctacgaaaattctgcaatgtattgaagttgcaagattttgtagtccggataaggcgttaacgcc < 2:1032666‑M2/97‑65 (MQ=255) tttC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGTGATg < 2:3398623/100‑1 (MQ=255) tC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGTGATGtt < 2:2619780/100‑1 (MQ=255) aGGCCTGATAAGCGGAGCGCATCAGGCctacgaaaattctgcaatgtattgaatttgcacgattttgtaggccggataaggcgttaacgccgcatccggc < 2:1208489‑M2/100‑74 (MQ=255) ggCCTGATAAGCGTAGCGCATCAGGCctacgaaaatcttgcaatgtattgaattttcatgattttgtaggccggataaggcgttcacgccgcatccggca < 1:3105598‑M2/100‑75 (MQ=255) ggCCTGATAAGCGGAGCGCATCAGGCctacgaaaattctgcaatgtattgaatttgcacgattttgtaggccggataaggcgttaacgccgcatccggca > 2:1433885‑M2/1‑26 (MQ=255) ggCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCTATCAGTCTTGTATGGCTTTTAATTATTCGATATAGACGTTTTCGAAGTGATGTTTGCCt > 2:519829/1‑100 (MQ=255) ggCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGTGATGTTTGCCt > 2:2270031/1‑100 (MQ=255) ggCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGTGATGTTTGCCt < 1:4091775/100‑1 (MQ=255) gCCTGATAAGCGTAGCGCATCAGGCctacgaaaatcttgcaatgtattgaattttcatgattttgtaggccggataaggcgttcacgccgcatccggcaa < 1:1383917‑M2/100‑76 (MQ=255) ccTGATAAGCGTAGCGCATCAGGCctacgaaaatcttgcaatgtattgaattttcatgattttgtaggccggataaggcgttcacgccgcatccggcaag < 2:919671‑M2/100‑77 (MQ=255) ccTGATAAGCGTAGCGCATCAGGCctacgaaaatcttgcaatgtattgaattttcatgatttggtaggccggataaggcgttcacgccgcatccggcaag < 2:3292919‑M2/100‑77 (MQ=255) tGATAAGCGTAGCGCATCAGGCctacatggtcctgcaatatattgaattggcaagatttttgtaggccggataaggcgttcacgccgcatccggcatgaa < 1:1615250‑M2/100‑79 (MQ=255) tGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGTGATGTTTGCCTAATg < 2:1626204/100‑1 (MQ=255) tAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGTGATGTTTGCCTAATGGAt < 1:2785223/100‑1 (MQ=255) aGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGTGATGTTTGCCTAATGGATCa > 1:3369503/1‑100 (MQ=255) ggAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGTGATGTTTGCCTAATGGATCAAcc < 1:1795122/100‑1 (MQ=255) | TGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAATTCAATACATTGCA‑GAAT‑‑TTTC‑‑GTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTCTTGTATGGCTTTTAATTATTCGATAGAGACGTTTTCGAAGTGATGTTTGCCTAATGGATCAACCA > NC_000913/3705949‑3706147 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |