| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 3,840,547 | T→C | 33.5% | intergenic (+39/+2) | yicS → / ← nepI | putative periplasmic protein/putative transporter |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,840,547 | 0 | T | C | 33.5% | 179.0 / 157.0 | 176 | intergenic (+39/+2) | yicS/nepI | putative periplasmic protein/putative transporter |
| Reads supporting (aligned to +/- strand): ref base T (46/71); new base C (25/34); total (71/105) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.46e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.80e-01 | |||||||||||
Only 100 of 184 total aligned reads displayed.
ACGTAATAATCAGAGCAATTATTGGGAAGCGTTGGGTAAGGTAGAATGCCCGGATATGTAAGAACAGCAACAACTACTGACCAACGCTTCTTTACCTGATATCAGGATTTCTTCATTTTCACCTTTGCAGTAACCAACAATGCAGTCAGCAACATCAATGTGCCGGACAACATCAACGGCGAAGTCAGACCAATATTAT > NC_000913/3840448‑3840646 | cGTAATAATCAGAGCAATTATTGGGAAGCGTTGGGTAAGGTAGAATGCCCGGATATGTAAGAACAGCAACAACTACTGACCAACGCTTCTTTACCTGata < 2:347636/100‑1 (MQ=255) gTAATAATCAGAGCAATTAATGGGAAGCGTTGGGTAAGGTAGAGTGCCCGGATATGTAATAACAGCAACAACTACTGACCAACGCTTCTTTACCTGatat < 2:2805439/100‑1 (MQ=255) taataaTCAGAGCAATTATTGGGAAGCGTTGGGTAAGGTAGAATGCCCGGATCTGTACCAACAGCCACAACTACTAACCAACGCTTCTTTACCTGATATc > 2:3952503/1‑100 (MQ=255) taataaTCAGAGCAATTATTGGGAAGCGTTGGGTAAGATAGAATGCCCGGATATGTAAGAACAGCAACAACTACTGACCAACGCTTCTTTACCTGACATc > 2:1010718/1‑100 (MQ=255) taataaTCAGAGCAATTATTGGGAAGCGTTAGGTAAGGTAGAATGACCGGATATGTAAGAACAGCAACAACTACTGACCAACGCTTCTTTACCTGata < 2:499120/98‑1 (MQ=255) atCAGAGCAATTATTGGGAAGCGTTGGGTAAGGTAGAATGCCCGGATATGTAAGAACAGCAACAACTACTGACCAACGCTTCTTTACCTGACATCAGGAt > 1:689209/1‑100 (MQ=255) tCAGAGCAATTATTGGGAAGCGTTGGGTAAGGTAGAATGCCCGGATATGTAAGAACAGCAACAACTACTGACCAACGCTTCTTTACCTGATATCAGGAtt < 1:3547319/100‑1 (MQ=255) agagCAATTATTGGGAAGCGTTGGGTAAGGTAGAATGCCCGGATATGTAAGAACAGCAACAACTACTGACCAACGCTTCTTTACCTGATATCAGGATttc < 2:3408870/100‑1 (MQ=255) agagCAATTATTGGGAAGCGTTGGGTAAGGTAGAATGCCCGGATATGTAAGAACAGCAACAACTACTGACCAACGCTTCTTTACCTGATATCAGGATttc > 1:1132400/1‑100 (MQ=255) gagCAATTATTGGGAAGCGTTGGGTAAGGTAGAATGCCCGGATATGTAAGAACAGCAACAACTTCTGACCAACGCTTCTTTACCTGATATCAGGATttct < 1:2914159/100‑1 (MQ=255) agCAATTATTGGGAAGCGTTGGGTAAGGTAGAATGCCCGGATATGTAAGAACAGCAACAACTACTGACCAACGCTTCTTTACCTGATATCAGGATttctt < 1:730017/100‑1 (MQ=255) agCAATTATTGGGAAGCGTTGGGTAAGGTAGAATGCCCGGATATGTAAGAACAGCAACAACTACTGACCAACGCTTCTTTACCTGATAACAGGATttctt < 2:1389623/100‑1 (MQ=255) agCAATTATTGGGAAGCGTTGGGTAAGGTAGAATGCCCGGATATGTAAGAACAGCAACAACTACTGACCAACGCTTCTTTACCTGACATCAGGATttctt < 1:1289749/100‑1 (MQ=255) gCAATTATTGGGAAGCGTTGGGTAAGGTAGAATGTCCGGATATGTAAGAACAGCAACAACTACTGACCAACGCTTCTTTACCTGATATGAGGATttcttc < 2:2169155/100‑1 (MQ=255) cAATTATTGGGAAGCGTTGGGTAAGGTAGAATGCCCGGATATGTAAGAACAGCAACAACTAATGACCAACGCTTCTTTACCTGACATCAGGATTTCTTCa > 1:618234/1‑100 (MQ=255) acttattGGGAAGCGTTGGGTAAGGTAGAATGCCCGGATATGTAAGAACAGCAACAACTACTAACCAACGCTTCTTTACCTGATAATAGGATctcttc > 2:619135/3‑98 (MQ=255) attattGGGAAGCGTTGGGTAAGGTAGAATACCCTGTTATGTAATAACAGCAACAACTACTGACCAACGCTTCTTTACCTGACATCAGGATttcttc < 2:946226/97‑1 (MQ=255) ttattGGGAAGCGTTGGGTAAGGTAGAATGCCCGGATATGTAAGAACAGCAACAACTACTGACCAACGCTTCTTTACCTGATATCAGGATTTCTTCAttt < 1:2338757/100‑1 (MQ=255) tattGGGAAGCGTTGGGTAAGGTAGAATGCCCGGATATGTAAGAACAGCAACAACTACTGACCAACGCTTCTTTACCTGATATCAGGATTTCTTCAtttt < 2:2291162/100‑1 (MQ=255) ttGGGAAGCGTTGGGTAAGGTAGAATGCCCGGATATGTAAGAACAGCAACAACTACTGACCAACGCTTCTTTACCTGATATCAGGATTTCTTCATTTTCa < 1:4047095/100‑1 (MQ=255) gggtcgaggtGGGTAAGGTAGAATGCCCGGTTATGTAAGAACTGCAAAAACTACTCACCCACGCTTCTATCCATGATAGCACGCATTCTCCTTTTTAAc > 2:2000630/10‑99 (MQ=255) gggAAGCGTTGGGTAAGGTAGAATGCCCGGATATGTAAGAACAGCAACAACTACTGACCAACGCTTCTTTACCTGATATCAGGATTTCTTCATTTTCAcc < 2:3570944/100‑1 (MQ=255) gggAAGCGTTGGGTAAGGTAGAATGCCCGGATATGTAAGAACAGCAACAACTACTGACCAACGCTTCTTTACCTGACATCAGGATTTCTTCATTTTCAcc > 1:468668/1‑100 (MQ=255) gggAAGCGTTGGGTAAGGTAGAATGCCCGGATATGTAAGAACAGCAACAACTACTGACCAACGCCTCTTTACCTGATATCAGGATTTCTTCATTTTCAcc > 2:1171049/1‑100 (MQ=255) aGCGTTGGGTAAGGTAGAATGCCCGGATATGTAAGAACAGCAACAACTACTGACCAACGCTTCTTTACCTGATATCAGGATTTCTTCATTTTCACCTTTg < 2:4067159/100‑1 (MQ=255) aGCGCTGGGTAAGGTAGAATGCCCGGATATGTAAGAACAGCAACAACTACTGACCAACGCTTCTTTACCTGACATCAGGATTTCTTCATTTTCACCTTTg < 1:3507850/100‑1 (MQ=255) gCGTTGGGTAAGGTAGAATGCCCGGATATGTAAGAACAGCAACAACTACTGACCAACGCTTCTTTACCTGATATCAGGATTTCTTCATTTTCACCTTTGc < 2:1383222/100‑1 (MQ=255) gCGTTGGGTAAGGTAGAATGCCCGGATATGTAAGAACAGCAACAACTACTGACCAACGCTTCTTTACCTGATATCAGGATTTCTTCATTTTCACCTTTGc < 1:1468413/100‑1 (MQ=255) gCGTTGGGTAAGGTAGAATGCCCGGATATGTAAGAACAGCAACAACTACTGACCAACGCTTCTTTACCTGATATCAGGATTTCTTCATTTTCACCTTTGc < 1:316909/100‑1 (MQ=255) gCGTTGGGTAAGGTAGAATGCCCGGATATGTAAGAACAGCAACAACTACTGACCAACGCTTCTTTACCTGATATCAGGATTTCTTCATTTTCACCTTTGc < 1:2506622/100‑1 (MQ=255) gTTGGGTAAGGTAGAATGCCCGGATATGTAAGAACAGCAACAACTACTGACCAACGCTTCTTTACCTGATATCAGGATTTCTTCATTTTCACCTTTGCAg < 2:2244964/100‑1 (MQ=255) gTTGGGTAAGGTAGAATGCCCGGATATGTAAGAACAGCAACAACTACTGACCAACGCTTCTTTACCTGATATCAGGATTTCTTCATTTTCACCTTTGCAg < 2:2360650/100‑1 (MQ=255) gTTGGGTAAGGTAGAATGCCCGGATATGTAAGAACAGCAACAACTACTGACCAACGCTTCTTTACCTGATATCAGGATTTCTTCATTTTCACCTTTGCAg < 1:3074892/100‑1 (MQ=255) gTTGGGTAAGGTAGAATGCCCGGATATGTAAGAACAGCAACAACTACTGACCAACGCTTCTTTACCTGACATCAGGATTTCTTCATTTTCACCTTTGCAg < 2:194041/100‑1 (MQ=255) ggTAAGGTAGAATGCCCGGATATGTAAGAACAGCAACAACTACTGACCAACGCTTCTTTACCTGATATCAGGATTTCTTCATTTTCACCTTTGCAGTAAc < 1:3428448/100‑1 (MQ=255) ggTAAGGTAGAATGCCCGGATATGTAAGAACAGCAACAACTACTGACCAACGCTTCTTTACCTGACATCAGGATTTCTTCATTTTCACCTTTGCAGTAAc < 1:209393/100‑1 (MQ=255) gTAAGGTAGAATGCCCGGATATGTAAGAACAGCAACAACTACTGACCAACGCTTCTTTACCTGACATCAGGATTTCTTCATTTTCACCTTTGCAGTAAcc > 2:3365622/1‑100 (MQ=255) aaGGTAGAATGCCCGGATATGTAAGAACAGCCACAACTACTGACCAACGCTTCTTTACCTGACATCAGGATTTCTTCATTTTCACCTTTGCAGTAACcaa < 1:1698162/100‑1 (MQ=255) aaGGTAGAATGCCCGGATATGTAAGAACAGCAACAACTACTGACCAACGCTTCTTTACCTGACATCAGGATTTCTTCATTTTCACCTTTGCAGTAACcaa > 2:562819/1‑100 (MQ=255) ggTAGAACGCCCGGATATGTAAGAACAGCAACAACTACTGACCAACGCTTCTTTACCTGACATCAGGATTTCTTCATTTTCACCTTTGCAGTAACcaaca > 1:2160742/1‑100 (MQ=255) tataaTGCCCGGATATGTAAGAACAGCAACAACTACTGACCAACGCTTCTTTACCTGATATCAGGATTTCTTCATTTTCACCTTTTCAGTAACcaacaa < 2:2650247/96‑1 (MQ=255) tAGAATGCCCGGATATGTAAGAACAGCAACAACTACTGACCAACGCTTCTTTACCTGACATCAGGATTTCTTCATTTTCACCTTTGCAGTAACcaacaa > 1:2093657/1‑99 (MQ=255) aGAATGCCCGGATATGTAAGAACAGCAACAACTACTGACCAACGCTTCTTTACCTGACATCAGGATTTCTTCATTTTCACCTTTGCAGTAACCAACAATg < 2:412246/100‑1 (MQ=255) gAATGCCCGGATATGTAAGAACAGCAACAACTACTGACCAACGCTTCTTTACCTGATATCAGGATTTCTTCATTTTCACCTTTGCAGTAACCAACAATGc < 2:3835192/100‑1 (MQ=255) aTGCCCGGATATGTAAGAACAGCAACAACTACTCAACAACGCTTCTTTACCTGATATCAGGATTTCTTCATTTTCACCTTTGCAGTAACCAACAATGCAg < 2:1716985/100‑1 (MQ=255) tGCCCGGATATGTAAGAACAGCAACACCTACTGACCAACGCTTCTTTACCTGATATCAGGATTTCTTCATTTTCACCTTTCCAGTACCccacaa > 2:2852814/1‑94 (MQ=255) gCCCGGATATGTAAGAACAGCAACAACTACTGACCAACGCTTCTTTACCTGATATCAGGATTTCTTCATTTTCACCTTTGCAGTAACCAACAATGCAGTc > 1:466380/1‑100 (MQ=255) gCCCGGATATGTAAGAACAGCAACAACTACTGACCAACGCTTCTTTACCTGATATCAGGATTTCTTCATTTTCACCTTTGCAGTAACCAACAATGCAGTc > 2:1321442/1‑100 (MQ=255) gCCCGGATATGTAAGAACAGCAACAACTACTGACCAACGCTTCTTTACCTGATATCAGGATTTCTTCATTTTCACCTTTGCAGTAACCAACAATGCAGTc > 1:2244229/1‑100 (MQ=255) cccGGATATGTAAGAACAGCAACAACTACTGACCAACGCTTCTTTACCTGATATCAGGATTTCTTCATTTTCACCTTTGCAGTAACCAACAATGCAGTCa < 1:3691592/100‑1 (MQ=255) cccGGATATGTAAGAACAGCAACAACTACTGACCAACGCTTCTTTACCTGACATCAGGATTTCTTCATTTTCACCTTTGCAGTAACCAACAATGCAGTCa < 1:3365642/100‑1 (MQ=255) ggATATGTAAGAACAGCAACAACTACTGACCAACGCTTCTTTACCTGACATCAGGATTTCTTCATTTTCACCTTTGCAGTAACCAACAATGCAGTCAGCa < 2:1145384/100‑1 (MQ=255) ggATATGTAAGAACAGCAACAACTACTGACCAACGCTTCTTTACCTGACATCAGGATTTCTTCATTTTCACCTTTGCAGTAACCAACAATGCAGTCAGCa > 2:2337571/1‑100 (MQ=255) atatGTAAGAACAGCAACAACTACTGACCAACGCTTCTTTACCTGACATCAGGATTTCTTCATTTTCACCTTTGCAGTAACCAACAATGCAGTCAGCAAc < 2:468664/100‑1 (MQ=255) atatGTAAGAACAGCAACAACTACTGACCAACGCTTCTTTACCTGACATCAGGATTTCTTCATTTTCACCTTTGCAGTAACCAACAATGCAGTCAGCAAc > 2:3215559/1‑100 (MQ=255) tatGTAAGAACAGCAACAACTACTGCCCAACGCTTCTTTACCTGATACCAGCATTTCTTCATTTTCACCTTTGCAGTAACCAACAATGCAGTCAGCAAc < 2:18677/99‑1 (MQ=255) tatGTAAGAACAGCAACAACTACTGACCAACGCTTCTTTACCTGATATCAGGATTTCTTCATTTTCACCTTTGCAGTAACCAACAATGCAGTCAGCAACa > 2:303713/1‑100 (MQ=255) tGTAAGAACAGCAACAACTACTGACCAACGCTTCTTTACCTGATATCAGGATTTCTTCATTTTCACCTTTGCAGTAACCAACAATGCAGTCAGCAACATc > 2:3248868/1‑100 (MQ=255) tAAGAACAGCAACAACTACTGACCAACGCTTCTTTACCTGATATCAGGATTTCTTCATTTTCACCTTTGCAGTAACCAACAATGCAGTCAGCAACATCaa > 1:446580/1‑100 (MQ=255) aaGAACAGCAACAACTACTGACCAACGCTTCTTTACCTGATATCAGGATTTCTTCATTTTCACCTTTGCAGTAACCAACAATGCAGTCAGCAACATCAAt > 1:1143369/1‑100 (MQ=255) aaGAACAGCAACAACTACTGACCAACGCTTCTTTACCTGATATCAGGATTTCTTCATTTTCACCTTTGCAGTAACCAACAATGCAGTCAGCAACATCAAt > 2:1011155/1‑100 (MQ=255) aaGAACAGCAACAACTACTGACCAACGCTTCTTTACCTGATATCAGGATTTCTTCATTTTCACCTTTGCAGTAACCAACAATGCAGTCAGCAACATCAAt < 1:3270610/100‑1 (MQ=255) gAACAGCAACAAGTACTCACCAACGCTTCTTTACCTGATATCAGGATTTCTTCATTTTCACCTTTGCAGTAACCAACAATGCAGTCAGCAACATCAAtgt < 2:1296794/100‑1 (MQ=255) gCAACAGCTCCTGACCAACGCTTCTTTTCCTGATATCATGATTTCTTCATTTTCACCTTTGCAGTAACCAACAATGCAGTCAGCAACCTCAATGTGc < 2:2744252/97‑1 (MQ=255) gCAACAACTACTGACCAACGCTTCTTTACCTGATATCAGGATTTCTTCATTTTCACCTTTGCAGTAACCAACAATGCAGTCAGCAACATCAATGTGCCgg < 2:3782051/100‑1 (MQ=255) gCAACAACTACTGACCAACGCTTCTTTACCTGATATCAGGATTTCTTCATTTTCACCTTTGCAGTAACCAACAATGCAGTCAGCAACATCAATGTGCCgg < 1:1551656/100‑1 (MQ=255) gCAACAACTACTGACCAACGCTTCTTTACCTGATATCAGGATTTCTTCATTTTCACCTTTGCAGTAACCAACAATGCAGTCAGCAACATCAATGTGCCgg > 1:2655997/1‑100 (MQ=255) gCAACAACTACTGACCAACGCTTCTTTACCTGATATCAGGATTTCTTCATTTTCACCTTTGCAGTAACCAACAATGCAGTCAGCAACATCAATGTGCCgg > 1:1769693/1‑100 (MQ=255) gCAACAACTACTGACCAACGCTTCTTTACCTGATATCAGGATTTCTTCATTTTCACCTTTGCAGTAACCAACAATGCAGTCAGCAACATCAATGTGCCgg < 2:4127016/100‑1 (MQ=255) acaacTACTGACCAACGCTTCTTTACCTGATATCAGGATTTCTTCATTTTCACCTTTGCAGTAACCAACAATGCAGTCAGCAACATCAATGTGCCGGaca < 1:1005838/100‑1 (MQ=255) caacTACTGACCAACGCTTCTTTACCTGATATCAGGATTTCTTCATTTTCACCTTTGCAGTAACCAACAATGCAGTCAGCAACATCAATGTGCCGGacaa < 2:2373884/100‑1 (MQ=255) aacTACTGACCAACGCTTCTTTACCTGATATCAGGATTTCTTCATTTTCACCTTTGCAGTAACCAACAATGCAGTCAGCAACATCAATGTGCCGGacaac < 2:3666015/100‑1 (MQ=255) actactGACCAACGCTTCTTTACCTGACATCAGGATTTCTTCATTTTCACCTTTGCAGTAACCAACAATGCAGTCAGCAACATCAATGTGCCGGacaaca < 1:3208311/100‑1 (MQ=255) tactGACCAACGCTTCTTTACCTGATATCAGGATTTCTTCATTTTCACCTTTGCAGTAACCAACAATGCAGTCAGCAACATCAATGTGCCGGACAACATc > 2:2049358/1‑100 (MQ=255) actGACCAACGCTTCTTTACCTGACATCAGGATTTCTTCATTTTCACCTTTGCAGTAACCAACAATGCAGTCAGCAACATCAATGTGCCGGACAACATCa < 2:293396/100‑1 (MQ=255) tgtccAACGCTTCTTTACATGATATCAGGATTTCTTCATTTTCACCTTTGCAGTAACCAACCATGCAGTCAGCAACATCAATGTGCCGGACAACATCa < 1:1581675/95‑1 (MQ=255) gACCAACGCTTCTTTACCTGATATCAGGATTTCTTCATTTTCACCTTTGCAGTAACCAACAATGCAGTCAGCAACATCAATGTGCCGGACAACATCAACg < 1:1896544/100‑1 (MQ=255) gACCAACGCTTCTTTACCTGACATCAGGATTTCTTCATTTTCACCTTTGCAGTAACCAACAATGCAGTCAGCAACATCAATGTGCCGGACAACATCAACg > 2:772648/1‑100 (MQ=255) actaaCGCTTCTTTACCTGATATCAGGATTTCTTCATTTTCACCTTTGCAGTAACCAACAATGCAGTCAGCAACATCAATGTGCCGGACAACATCAATgg < 1:2464575/97‑1 (MQ=255) ccAACGCTTCTTTACCTGATATCAGGATTTCTTCATTTTCACCTTTGCAGTAACCAACAATGCAGTCAGCAACATCAATGTGCCGGACAACATCAACg > 2:1687738/1‑98 (MQ=255) ccAACGCTTCTTTACCTGATATCAGGATTTCTTCATTTTCACCTTTGCAGTAACCAACAATGCAGTCAGCAACATCAATGTGCCGGACAACATCAACGGc < 1:1063758/100‑1 (MQ=255) ccAACGCTTCTTTACCTGACATCAGGATTTCTTCATTTTCACCTTTGCAGTAACCAACAATGCAGTCAGCAACATCAATGTGCCGGACAACATCAACGGc < 2:327690/100‑1 (MQ=255) ccAACGCTTCTTTACCTGACATCAGGATTTCTTCATTTTCACCTTTGCAGTAACCAACAATGCAGTCAGCAACATCAATGTGCCGGACAACATCAACGGc > 2:3223346/1‑100 (MQ=255) cAACGCTTCTTTACCTGATATCAGGATTTCTTCATTTTCACCTTTGCAGTAACCAACAATGCAGTCAGCAACCTCAATGTGCCTGACAACATCAACGGCg > 2:680486/1‑100 (MQ=255) aaCGCTTCTTTACCTGATATCAGGATTTCTTCATTTTCACCTTTGCAGTAACCAACAATGCAGTCAGCAACATCAATGTGCCGGACAACATCAACGGc > 2:3254167/1‑98 (MQ=255) aaCGCTTCTTTACCTGATATCAGGATTTCTTCATTTTCACCTTTGCAGTAACCAACAATGCAGTCAGCAACATCAATGTGCCGGACAACATCAACGGCGa > 1:2374518/1‑100 (MQ=255) aaCGCTTCTTTACCTGATATCAGGATTTCTTCATTTTCACCTTTGCAGTAACCAACAATGCAGTCAGCAACATCAATGTGCCGGACAACATCAACGGCGa > 1:2493151/1‑100 (MQ=255) aaCGCTTCTTTACCTGACATCAGGATTTCTTCATTTTCACCTTTGCAGTAACCAACAATGCAGTCAGCAACATCAATGTGCCGGACAACATCAACGGCGa < 2:1562319/100‑1 (MQ=255) aCGCTTCTTTACCTGATATCAGGATTTCTTCATTTTCACCTTTGCAGTAACCAACAATGCAGTCAGCAACATCAATGTGCCGGACAACATCAACGGCg < 2:2508375/98‑1 (MQ=255) cGCTTCTTTACCTGATATCAGGATTTCTTCATTTTCACCTTTGCAGTAACCAACAATGCAGTCAGCAACATCAATGTGCAGGACAACATCAACGGCGAAg < 2:822378/100‑1 (MQ=255) cGCTTCTTTACCTGACATCAGGATTTCTTCATTTTCACCTTTGCAGTAACCAACAATGCAGTCAGCAACATCAATGTGCCGGACAACATCAACGGCGAAg < 2:4066840/100‑1 (MQ=255) tttACCTGACATCAGGATTTCTTCATTTTCACCTTTGCAGTAACCAACAATGCAGTCAGCAACATCAATGTGCCGGACAACATCAACGGCGAAGTCAGAc < 1:1948727/100‑1 (MQ=255) ttACCTGACATCAGGATTTCTTCATTTTCACCTTTGCAGTAACCAACAATGCAGTCAGCAACATCAATGTGCCGGACAACATCAACGGCGAAGTCAGAcc < 2:3615369/100‑1 (MQ=255) tatcTGATATCAGGATTTCTTCCTTTTCACCTTTGCAGTAACCAACAATGCAGTCAGCAACATCAATGTGCCGTACAACATCAACGGCGAAGTCAGAcc < 2:2577539/96‑1 (MQ=255) tACCTGATATCAGGATTTCTTCATTTTCACCTTTGCAGTAACCAACAATGCAGTCAGCAACATCAATGTGCCGGACAACATCAACGGCGAAGTCAGACCa > 1:956256/1‑100 (MQ=255) aCCTGATATCAGGATTTCTTCATTTTCACCTTTGCAGTAACCAACAATGCAGTCAGCAACATCAATGTGCCGGACAACATCAACGGCGCCGTCAGCCCaa > 1:3866714/1‑100 (MQ=255) aCCTGACATCAGGATTTCTTCATTTTCACCTTTGCAGTAACCAACAATGCAGTCAGCAACATCAATGTGCCGGACAACATCAACGGCGAAGTCAGACCaa > 2:1192303/1‑100 (MQ=255) tGATATCAGGATTTCTTCATTTTCACCTTTGCAGTAACCAACAATGCAGTCAGCAACATCAATGTGCCGGACAACATCAACGGCGAAGTCAGACCAatat < 1:2551720/100‑1 (MQ=255) gATATCAGGATTTCTTCATTTTCACCTTTGCAGTAACCAACAATGCAGTCAGCAACATCAATGTGCCGGACAACATCAACGGCGAGGTCAGACCAAtatt > 1:3528202/1‑100 (MQ=255) tatCAGGATTTCTTCATTTTCACCTTTGCAGTAACCAACAATGCAGTCAGCAACATCAATGTGCCGGACAACATCAACGGCGAAGTCAGACCAAtattat > 2:690459/1‑100 (MQ=255) | ACGTAATAATCAGAGCAATTATTGGGAAGCGTTGGGTAAGGTAGAATGCCCGGATATGTAAGAACAGCAACAACTACTGACCAACGCTTCTTTACCTGATATCAGGATTTCTTCATTTTCACCTTTGCAGTAACCAACAATGCAGTCAGCAACATCAATGTGCCGGACAACATCAACGGCGAAGTCAGACCAATATTAT > NC_000913/3840448‑3840646 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |