| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 4,098,512 | C→A | 26.1% | R259R (CGC→CGA) | rhaS → | transcriptional activator of rhaBAD and rhaT |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,098,512 | 0 | C | A | 26.1% | 363.9 / 130.1 | 196 | R259R (CGC→CGA) | rhaS | transcriptional activator of rhaBAD and rhaT |
| Reads supporting (aligned to +/- strand): ref base C (79/62); new base A (31/20); total (114/82) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.22e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.72e-01 | |||||||||||
Only 100 of 198 total aligned reads displayed.
AAAGCCCGACATCTGCTACGCCACAGCGAGGCCAGCGTTACTGACATCGCCTATCGCTGTGGATTCAGCGACAGTAACCACTTTTCGACGCTTTTTCGCCGAGAGTTTAACTGGTCACCGCGTGATATTCGCCAGGGACGGGATGGCTTTCTGCAATAACGCGAATCTTCTCAACGTATTTGTACGCCATATTGCGAA > NC_000913/4098414‑4098611 | aaaGCCCGACATCTGCTACGCCACAGCGAGGCCAGCGTTACTGACATCGCCTATCGCTGTGGATTCAGCGACAGTAACCACTTTTCGACGCTTTTTCGcc < 2:769329/100‑1 (MQ=255) aaGCCCGACATCTGCTACGCCACAGCGAGGCCAGCGTTACTGACATCGCCTATCGCTGTGGATTCAGCGACAGTAACCACTTTTCGACGCTTTTTCGCCg > 1:1344487/1‑100 (MQ=255) nccGACATCTGCTACGCCACAGCGAGGCCAGCGTTACTGACATCGCCTATCGCTGTGGATTCAGCGACAGTAACCACTTTTCGACGCTTTTTCGCCgaga > 2:920452/2‑100 (MQ=255) cccGACATCTGCTACGCCACAGCGAGGCCAGCGTTACTGACATCGCCTATCGCTGTGGATTCAGCGACAGTAACCACTTTTCGACGCTTTTTCGACgaga > 2:723500/1‑100 (MQ=255) ccGACATCTGCTACGCCACAGCGAGGCCAGCGTTACTGACATCGCCTATCGCTGTGGATTCAGCGACAGTAACCACTTTTCGACGCTTTTTCGCCGagag > 1:3750425/1‑100 (MQ=255) cGACATCTGCTACGCCACAGCGAGGCCAGCGTTACTGACATCGCCTATCGCTGTGGATTCAGCGACAGTAACCACTTTTCGACGCTTTTTCGCCGAGAGt > 1:3199803/1‑100 (MQ=255) aCATCTGCTACGCCACAGCGAGGCCAGCGTTACTGACATCGCCTATCGCTGTGGATTCAGCGACAGTAACCACTTTTCGACGCTTTTTCGCCGAGAGttt < 1:2568191/100‑1 (MQ=255) tCTGCTACGCCACAGCGAGGCCAGCGTTACTGACATCGCCTATCGCTGTGGATTCAGCGACAGTAACCACTTTTCGACGCTTTTTCGCCGAGAGTTTAAc < 2:3199784/100‑1 (MQ=255) tCTGCTACGCCACAGCGAGGCCAGCGTTACTGACATCGCCTATCGCTGTGGATTCAGCGACAGTAACCACTTTTCGACGCTTTTTCGACGAGAGTTTAAc > 2:1468407/1‑100 (MQ=255) tCTGCTACGCCACAGCGAGGACAGCGTTACTGACCTCGCCTATCGCTGTGGATTCAGCGACAGTAGCCACTTTGCGACGCTTTTTCGACGAGAGTTTAAc < 2:1080744/100‑1 (MQ=255) cTGCTACGCCACAGCGAGGCCAGCGTTACTGACATCGCCTAACGCTGTGGATTCAGCGACAGTAACCACTTTTCGGCGCTTTTTCGCCGAGAGTTTAACt > 1:1922290/1‑100 (MQ=255) gCTACGCCACAGCGAGGCCAGCGTTACTGACATCGCCTATCGCTGTGGATTCAGCGACAGTAACCACTTTTCGACGCTTTTTCGCCGAGAGTTTAACTgg < 1:3243886/100‑1 (MQ=255) gCTACGCCACAGCGAGGCCAGCGTTACTGACATCGCCTATCGCTGTGGATTCAGCGACAGTAACCACTTTTCGACGCTTTTTCGCCGAGAGATTAACtag > 2:1417342/1‑98 (MQ=255) cTACGCCACAGCGAGGCCAGCGTTACTGACATCGCCTATCGCTGTGGATTCAGCGACAGTAACCACTTTTCGACGCTTTTTCGCCGAGAGTTTAACTGGt > 2:3964873/1‑100 (MQ=255) tACGCCACAGCGAGGCCAGCGTTACTGACATCGCCTATCGCTGTGGATTCAGCGACAGTAACCACTTTTCGACGCTTTTTCGCCGAGAGTTTAACTGGTc > 2:2760083/1‑100 (MQ=255) gCCACAGCGAGGCCAGCGTTACTGACATCGCCTATCGCTGTGGATTCAGCGACAGTAACCACTTTTCGACGCTTTTTCGCCGAGAGTTTAACTGGTCAcc > 1:3962489/1‑100 (MQ=255) gCCACAGCGAGGCCAGCGTTACTGACATCGCCTATCGCTGTGGATTCAGCGACAGTAACCACTTTTCGACGCTTTTTCGCCGAGAGTTTAACTGGTCAcc > 2:1348973/1‑100 (MQ=255) gCCACAGCGAGGCCAGCGTTACTGACATCGCCTATCGCTGTGGATTCAGCGACAGTAACCACTTTTCGACGCTTTTTCGCCGAGAGTTTAACTGGTCAcc > 2:52838/1‑100 (MQ=255) ccACAGCGAGGCCAGCGTTACTGACATCGCCTATCGCTGTGGATTCAGCGACAGTAACCACTTTTCGACGCTTTTTCGCCGAGAGTTTAACTGGTCACcg > 1:3664209/1‑100 (MQ=255) ccACAGCGAGGCCAGCGTTACTGACATCGCCTATCGCTGTGGATTCAGCGACAGTAACCACTTTTCGACGCTTTTTCGCCGAGAGTTTAACTGGTCACcg > 1:1052577/1‑100 (MQ=255) ccACAGCGAGGCCAGCGTTACTGACATCGCCTATCGCTGTGGATTCAGCGACAGTAACCACTTTTCGACGCTTTTTCGACGAGAGTTTAACTGGTCACcg > 2:1145946/1‑100 (MQ=255) cacaGCGAGGCCAGCGTTACTGACATCGCCTATCGCTGTGGATTCAGCGACAGTAACCACTTTTCGACGCTTTTTCGCCGAGAGTTTAACTGGTCACcgc > 1:1651407/1‑100 (MQ=255) caGCGAGGCCAGCGTTACTGACATCGCCTATCGCTGTGGATTCAGCGACAGTAACCACTTTTCGACGCTTTTTCGCCGAGAGTTTAACTGGTCACCGCGt > 2:2915444/1‑100 (MQ=255) aGCGAGGCCAGCGTTACTGACATCGCCTATCGCTGTGGATTCAGCGACAGTAACCACTTTTCGACGCTTTTTCGCCGAGAGTTTAACTGGTCACCGCGTg < 2:2315072/100‑1 (MQ=255) gCGAGGCCAGCGTTACTGACATCGCCTATCGCTGTGGATTCAGCGACAGTAACCACTTTTCGACGCTTTTTCGCCGAGAGTTTAACTGGTCAc > 2:3278800/1‑93 (MQ=255) gCGAGGCCAGCGTTACTGACATCGCCTATCGCTGTGGATTCAGCGACAGTAACCACTTTTCGACGC‑TTTTCGCCGAGAGTTTAACTGGTCACCGCGTGat > 1:995428/1‑100 (MQ=255) gAGGCCAGCGTTACTGACATCGCCTATCGCTGTGGATTCAGCGACAGTAACCACTTTTCGACGCTTTTTCGCCGAGAGTTTAACTGGTCACCGCGTGata < 1:1891893/100‑1 (MQ=255) ggCCAGCGTTACTGACATCGCCTATCGCTGTGGATTCAGCGACAGTAACCACTTTTCGACGCTTTTTCGCCGAGAGTTTAACTTGTCACCGCGTGATAtt > 1:1487643/1‑100 (MQ=255) ggCCAGCGTTACTGACATCGCCTATCGCTGTGGATTCAGCGACAGTAACCACTTTTCGACGCTTTTTCGACGAGAGTTTAACTGGTCACCGCGTGATAtt > 1:1969145/1‑100 (MQ=255) gCCAGCGTTACTGACATCGCCTATCGCTGTGGATTCAGCGACAGTAACCACTTTTCGACGCTTTTTCGCCGAGGGTTTAACTGGTCACCGCGTGATATTc > 1:98273/1‑100 (MQ=255) ccAGCGTTACTGACATCGCCTATCGCTGTGGATTCAGCGACAGTAACCACTTTTCGACGCTTTTTCGCCGAGAGTTTAACTGGTCACCGCGTGATATTCg > 2:1941428/1‑100 (MQ=255) ccAGCGTTACTGACATCGCCTATCGCTGTGGATTCAGCGACAGTAACCACTTTTCGACGCTTTTTCGACGAGAGTTTAACTGGTCACCGCGTGATATTCg > 2:1630259/1‑100 (MQ=255) cAGCGTTACTGACATCGCCTATCGCTGTGGATTCAGCGACAGTAACCACTTTTCGACGCTTTTTCGCCGAGAGTTTAACTGGTCACCGCGTGATATTCGc > 1:2264850/1‑100 (MQ=255) cAGCGTTACTGACATCGCCTATCGCTGTGGATTCAGCGACAGTAACCACTTTTCGACGCTTTTTCGCCGAGAGTTTAACTGGTCACCGCGTGATATTCGc > 1:1497376/1‑100 (MQ=255) aGCGTTACTGACATCGCCTATCGCTGTGGATTCAGCGACAGTAACCACTTTTCGACGCTTTTTCGCCGAGAGTTTAACTGGTCACCGCGTGATATTCGcc > 1:4070346/1‑100 (MQ=255) gCGTTACTGACATCGCCTATCGCTGTGGATTCAGCGACAGTAACCACTTTTCGACGCTTTTTCGCCGAGAGTTTAACTGGTCACCGCGTGATATTCGCCa < 2:172898/100‑1 (MQ=255) cGTTACTGACATCGTCTATCGCTGTGGATTCAGCGACAGTAACCACTTTTCGACGCTTTTTCGCCGAGAGTTTAACTGGTCACCGCGTGATATTCGCCAg < 2:1216241/100‑1 (MQ=255) cGTTACTGACATCGCCTATCGCTGTGGATTCAGCGACAGTAACCACTTTTCGACGCTTTTTCGACGAGAGTTTAACTGGTCACCGCGTGATATTCGCCAg < 2:2014805/100‑1 (MQ=255) tACTGACATCGCCTATCGCTGTGGATTCAGCGACAGTAACCACTTTTCGACGCTTTTTCGACGAGAGTTTAACTGGTCACCGCGTGATATTCGCCAggag > 1:351905/1‑98 (MQ=255) cTGACAGCGCCTATCGCTGTGGATTCAGCGACAGTAACCACTTTTCGACGCTTTTTCGCCGAGAGTTTAACTGGTCACCGCGTGATATTCGCCAGGGACg < 2:2381218/100‑1 (MQ=255) tGACATCGCCTATCGCTGTGGATTCAGCGACAGTAACCACTTTTCGACGCTTTTTCGCCGAGAGTTTAACTGGTCACCGCGTGATATTCGCCAGGGACgg < 1:528538/100‑1 (MQ=255) gACATCGCCTATCGCTGTGGATTCAGCGACAGTAACCACTTTTCGACGCTTTTTCGCCGAGAGTTTAACTGGTCACCGCGTGATATTCGCCAGGGACggg < 1:3543024/100‑1 (MQ=255) gACATCGCCTATCGCTGTGGATTCAGCGACAGTAACCACTTTTCGACGCTTTTTCGCCGAGAGTTTAACTGGTCACCGCGTGATATTCGCCAGGGACggg > 1:2772531/1‑100 (MQ=255) gACATCGCCTATCGCTGTGGATTCAGCGACAGTAACCACTTTTCGACGCTTTTTCGCCGAGAGTTTAACTGGTCACCGCGTGATATTCGCCAGGGACggg < 2:3071882/100‑1 (MQ=255) cATCGCCTATCGCTGTGGATTCAGCGACAGTAACCACTTTTCGACGCTTTTTCGACGAGAGTTTAACTGGTCACCGCGTGATATTCGCCAGGGACGGGAt < 1:2907455/100‑1 (MQ=255) agcGCCTATCGCTATGGATTCAGCGACAGTAGCCACTTTTCGACGCTTTTTCGACGAGAGTTTAACTGGTCACCGCGTGATATTCGCCAGGGACGGGATg > 1:2782099/3‑100 (MQ=255) aTCTCCTATCGCTGTGGATTCAGCGACAGTAACCACTTTTCGACGCTTTTTCGCCGAGAGTTTAACTGGTCACCGCGTGATATTCGCCAGGGACGGGATg < 2:656700/100‑1 (MQ=255) aTCGCCTATCGCTATCGATTCAGCGACACTAACCACTTTTCGACGCTGTTTCGACGAGCGCTTAACTGGTCACCGAGCGTTCTTCGCCAgggcccggctg > 2:1099098/1‑92 (MQ=255) ccTATCGCTGTGGATTCAGCGACAGTAACCACTTTTCGACGCTTTTTCGCCGAGAGTTTAACTGGTCACCGCGTGATATTCGCCAGGGACGGGATGGCtt < 2:1510595/100‑1 (MQ=255) ctgtCGCTGTGGATTCAGCGCCAGTAGCCACTGTTCGGCGCTTTGTCGACTAGAGTTTAACAGGTCACCGCGTGATGTTCGCCAGGGACGGGATGGttt > 2:1384969/4‑99 (MQ=255) tATCGCTGTGGATTCAGCGACAGTAACCACTTTTCGACGCTTTTTCGCCGAGAGTTTAACTGGTCACCGCGTGATATTCGCCAGGGACGGGATGGCTTTc < 1:2917318/100‑1 (MQ=255) tATCGCTGTGGATTCAGCGACAGTAACCACTTTTCGACGCTTTTTCGACGAGAGTTTAACTGGTCACCGCGTGATATTCGCCAGGGACGGGATGGCTTTc > 2:258831/1‑100 (MQ=255) tCGCTGTGGATTCAGCGACAGTATCCACTTTTCGACGCTTTTTCGCCGAGAGTTTAACTGGTCACTGCGTGATATTCGCCAGGGACGGGATGGCTTTCTg < 1:630431/100‑1 (MQ=255) cGCTGTGGATTCAGCGACAGTAACCACTTTTCGACGCTTTTTCGCCGAGAGTTTAACTGGTCACCGCGTGATATTCGCCAGGGACGGGATGGCTTTCTGc < 2:3567333/100‑1 (MQ=255) cGCTGTGGATTCAGCGACAGTAACCACTTTTCGACGCTTTTTCGCCGAGAGTTTAACTGGTCACCGCGTGATATTCGCCAGGGACGGGATGGCTTTCTGc < 2:1610250/100‑1 (MQ=255) gCTGTGGATTCAGCGACAGTAACCACTTTTCGACGCTTTTTCGCCGAGAGTTTAACTGGTCACCGCGTGATATTCGCCAGGGACGGGATGGCTTTCTGCa > 1:2001382/1‑100 (MQ=255) gCTGTGGATTCAGCGACAGTAACCACTTTTCGACGCTTTTTCGCCGAGAGTTTAACTGGTCACCGCGTGATATTCGCCAGGGACGGGATGGCTTTCTGCa > 2:3845766/1‑100 (MQ=255) gCTGTGGATTCAGCGACAGTAACCACTTTTCGACGCTTTTTCGCCGAGAGTTTAACTGGTCACCGCGTGATATTCGCCAGGGACGGGATGGCTTTCTGCa > 1:2378032/1‑100 (MQ=255) gCTGTGGATTCAGCGACAGTAACCACTTTTCGACGCTTTTTCGCCGAGAGGTTAACTGGTCACCGCGTGATATTCGCCAGGGTCGGTATGGCTTTCTGc > 2:2083798/1‑99 (MQ=255) gCTGTGGATTCAGCGACAGTAACCACTTTTCGACGCTTTTTCGACGAGAGTTTAACTGGTCACCGCGTGATATTCGCCAGGGACGGGATGGCTTTCTGCa > 2:1751173/1‑100 (MQ=255) gCTGTGGATTCAGCGACAGTAACCACTTTTCGACGCTTTTTCGACGAGAGGTTAACTGGTCACCGCGTGATATTCGCCAGGGACGGGATGGCTTTCTGCa > 2:4035308/1‑100 (MQ=255) tgtgGATTCAGCGACAGTAACCACTTTTCGACGCTTTTTTTTTTTTTTTTTAACTGGTCACCGCGTCATATTCTCCATCGACGGGATGGCTTTCTGCAAt > 2:583129/1‑100 (MQ=255) ggATTCAGCGACAGTAACCACTTTTCGACGCTTTTTCGCCGAGAGTTTAACTGGTCACCGCGTGATATTCGCCAGGGACGGGATGGCTTTCTGCAATAAc < 2:982665/100‑1 (MQ=255) gATTCAGCGACAGTAACCACTTTTCGACGCTTTTTCGCCGAGAGTTTAACTGGTCACCGCGTGATATTCGCCAGGGACGGGATGGCTTTCTGCAATAAcg < 1:2129528/100‑1 (MQ=255) gATTCAGCGACAGTAACCACTTTTCGACGCTTTTTCGACGAGAGTTTAACTGGTCACCGCGTGATATTCGCCAGGGACGGGATGGCTTTCTGCAATAAcg > 1:3043400/1‑100 (MQ=255) aTTCAGCGACAGTAACCACTTTTCGACGCTTTTTCGCCGAGAGTTTAACTGGTCACCGCGTGATATTCGCCAGGGACGGGATGGCTTTCTGCAATAAcgc > 1:269473/1‑100 (MQ=255) aTTCAGCGACAGTAACCACTTTTCGACGCTTTTTCGCCGAGAGTTTAACTGGTCACCGCGTGATATTCGCCAGGGACGGGATGGCTTTCTGCAATAAcgc > 1:3405941/1‑100 (MQ=255) aTTCAGCGACAGTAACCACTTTTCGACGCTTTTTCGACGAGAGTTTAACTGGTCACCGCGTGATATTCGCCAGGGACGGGATGGCTTTCTGCAATAAcgc > 1:179957/1‑100 (MQ=255) ttCAGCGACAGTAACCACTTTTCGACGCTTTTTCGCCGGGAGGTTATCTGGTCACCGCGTGATATTCGCCAGGGACGGGATGGCTTTCTGCAATAAcgcg < 2:513596/100‑1 (MQ=255) ttCAGCGACAGTAACCACTTTTCGACGCTTTTTCGCCGAGAGTTTAACTGGTCACCGCGTGATATTCGCCAGGGACGGGATGGCTTTCTGCAATAAcgcg > 1:109866/1‑100 (MQ=255) ttCAGCGACAGTAACCACTTTTCGACGCTTTTTCGCCGAGAGTTTAACTGGTCACCGCGTGATATTCGCCAGGGACGGGATGGCTTTCTGCAATAAcgcg > 1:583527/1‑100 (MQ=255) cAGCGACAGTAACCACTTTTCGACGCTTTTTCGACGAGAGTTTAACTGGTCACCGCGTGATATTCGCCAGGGACGGGATGGCTTTCTGCAATAACGCGaa > 2:3311828/1‑100 (MQ=255) agctccAGTAACCACTTTTCGACGCTTTTTCGACGAGAGTTTAACTGGTCACTGCGTGATGTTCGCCAGGGAAGGGATGGCTTTCTGCAATAACGCGaa > 2:2696375/6‑99 (MQ=255) aGCGACAGTAACCACTTTTCGACGCTTTTTTGACGAGAGTTTAAATGGTCACCGCGTGATATTCGCCAGGGACGGGATGGCTTTCTGCAATAACGCGAAt > 2:629896/1‑100 (MQ=255) aGCGACAGTAACCACTTTTCGACGCTTTTTCGCCGAGAGTTTAACTGGTCACCGCGTGATATTCGCCAGGGACGGGATGGCTTTCTGCAATAACGCGAAt > 2:2153275/1‑100 (MQ=255) aGCGACAGTAACCACTTTTCGACGCTTTTTCGCCGAGAGTTTAACTGGTCACCGCGTGATATTCGCCAGGGACGGGATGGCTTTCTGCAATAACGCGAAt > 2:251531/1‑100 (MQ=255) aGCGACAGTAACCACTTTTCGACGCTTTTTCGCCGAGAGGTTAACTGGTCACCGCGTGATATTCGCCAGGGACGGGATGGCTTTCTGCACTAACGCGAAt > 1:1560356/1‑100 (MQ=255) gCGACAGTAACCACTTTTCGACGCTTTTTCGCCGAGAGTTTAACTGGTCACCGCGTGATATTCGCCAGGGACGGGATGGCTTTCTGCAATAACGCGAAtc < 1:1461195/100‑1 (MQ=255) gCGACAGTAACCACTTTTCGACGCTTTTTCGCCGAGAGTTTAACTGGTCACCGCGTGATATTCGCCAGGGACGGGATGGCTTTCTGCAATAACGCGAAtc > 2:1924298/1‑100 (MQ=255) aCAGTAACCACTTTTCGACGCTTTTTCGCCGAGAGTTTAACTGGTCACCGCGTGATATTCGCCAGGGACGGGATGGCTTTCTGCAATAACGCGAAtcttc < 1:3439668/100‑1 (MQ=255) gTAACCACTTTTCGACGCTTTTTTTTTTTTTTTTTAACTCGTCACCGCGTGATATTCTCCCACGATGGGATGGTTTTCTACAATTATGCGAAtctt > 2:2268188/1‑96 (MQ=255) aaCCACTTTTCGACGCTTTTTCGCCGAGAGTTTAACTGGTCACCGCGTGATATTCGCCAGGGACGGGATGGCTTTCTGCAATAACGCGAATCTTCTCAAc < 2:1202164/100‑1 (MQ=255) aaCCACTTTTCGACGCTTTTTCGCCGAGAGTTTAACTGGTCACCGCGTGATATTCGCCAGGGACGGGATGGCTTTCTGCAATAACGCGAATCTTCTCAAc < 1:2153288/100‑1 (MQ=255) aaCCACTTTTCGACGCTTTTTCGCCGAGAGTTTAACTGGTCACCGCGTGATATTCGCCAGGGACGGGATGGCTTTCTGCAATAACGCGAATCTTCTCAAc > 2:2102793/1‑100 (MQ=255) aCCACTTTTCGACGCTTTTTCGCCGAGAGTTTAACTGGTCACCGCGTGATATTCGCCAGGGACGGGATGGCTTTCTGCAATAACGCGAATCTTCTCAACg > 2:466302/1‑100 (MQ=255) aCCACTTTTCGACGCTTTTTCGCCGAGAGTTTAACTGGTCACCGCGTGATATTCGCCAGGGACGGGATGGCTTTCTGCAATAACGCGAATCTTCTCAACg > 2:2146044/1‑100 (MQ=255) ccACTTTTCGACGCTTTTTCGCCGAGAGTTTAACTGGTCACCGCGTGATATTCGCCAGGGACGGGATGGCTTTCTGCAATAACGCGAATCTTCTCAACGt > 2:1314601/1‑100 (MQ=255) ccACTTTTCGACGCTTTTTCGCCGAGAGTTTAACTGGTCACCGCGTGATATTCGCCAGGGACGGGATGGCTTTCTGCAATAACGCGAATCTTCTCAACGt < 2:1560344/100‑1 (MQ=255) ttCGACGCTTTTTCGCCGAGAGTTTAACTGGTCAGCGCCTGATATTCGCCAGGGACGGGATTGCTTTCTGCAATAACGCGAATCTTCTCAACGTATTTGt < 2:852703/100‑1 (MQ=255) cGACGCTTTTTCGCCGAGAGTTTAACTGGTCACCGCGTGATATTCGCCAGGGACGGGATGGCTTTCTGCAATAACGCGAATCTTCTCAACGTATTTGTAc > 1:760532/1‑100 (MQ=255) cGACGCTTTTTCGACGAGAGTTTAACTGGTCACCGCGTGATATTCGCCAGGGACGGGATGGCTTTCTGCAATAACGCGAATCTTCTCAACGTATTTGTAc > 1:3158972/1‑100 (MQ=255) cGACGCTTTTTCGACGAGAGTTTAACTGGTCACCGCGTGATATTCGCCAGGGACGGGATGGCTTTCTGCAATAACGCGAATCTTCTCAACGTATTTGTAc > 1:1711092/1‑100 (MQ=255) ttccgatcttCGCCGAGAGTTTAACTGGTCACCGCGTGATATTCGCCAGGGACGGGATGGCTTTCTGCAATAACGCGAATCTTCTCAACGTATTTGTACg < 1:2110139/92‑1 (MQ=255) gACGCTTTTTCGCCGAGAGGTTAACTGGTCACCGCGTGATATTCGCCAGGGACGGGATGGCGTTCTGCAATAACGCGAATCTTCTCAACGTATTTGTACg > 2:1918524/1‑100 (MQ=255) gACGCTTTTTCGACGAGAGTTTAACTGGTCACCGCGTGATATTCGCCAGGGACGGGATGGCTTTCTGCAATAACGCGAATCTTCTCAACGTATTTGTACg > 1:2466757/1‑100 (MQ=255) aCGCTTTTTCGACGAGAGTTTAACTGGTCACCGCGTGATATTCGCCAGGGACGGGATGGCTTTCTGCAATAACGCGAATCTTCTCAACGTATTTGTACGc < 1:723506/100‑1 (MQ=255) cGCTTTTTCGCCGAGAGTTTAACTGGTCACCGCGTGATATTCGCCAGGGACGGGATGGCTTTCTGCAATAACGCGAATCTTCTCAACGTATTTGTACGcc > 1:2022738/1‑100 (MQ=255) gCTTTTTCGCCGAGAGTTTAACTGGTCACCGCGTGATATTCGCCAGGGACGGGATGGCTTTCTGCAATAACGCGAATCTTCTCAACGTATTTGTACGCCa > 2:362376/1‑100 (MQ=255) tCGCCGAGAGTTTAACTGGTCACCGCGTGATATTCGCCAGGGACGGGATGGCTTTCTGCAATAACGCGAATCTTCTCAACGTATTTGTACgagatcggaa > 2:2110126/1‑91 (MQ=255) ccGAGAGTTTAACTGGTCACCGCGTGATATTCGCCAGGGACGGGATGGCTTTCTGCAATAACGCGAATCTTCTCAACGTATTTGTACGCCATATTGCGaa < 1:856417/100‑1 (MQ=255) | AAAGCCCGACATCTGCTACGCCACAGCGAGGCCAGCGTTACTGACATCGCCTATCGCTGTGGATTCAGCGACAGTAACCACTTTTCGACGCTTTTTCGCCGAGAGTTTAACTGGTCACCGCGTGATATTCGCCAGGGACGGGATGGCTTTCTGCAATAACGCGAATCTTCTCAACGTATTTGTACGCCATATTGCGAA > NC_000913/4098414‑4098611 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |