| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 4,251,287 | T→C | 46.0% | pseudogene (327/1323 nt) | yjbI → | pseudogene, SopA‑related, pentapeptide repeats‑containing |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,251,287 | 0 | T | C | 46.0% | 43.9 / 254.3 | 191 | pseudogene (327/1323 nt) | yjbI | pseudogene, SopA‑related, pentapeptide repeats‑containing |
| Reads supporting (aligned to +/- strand): ref base T (56/47); new base C (42/46); total (98/93) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.86e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 193 total aligned reads displayed.
CAATGTGATTTTTATCAAAGCGAGTGGTGAATGTGTCGATTTCAGCAAAAATATTCTTGATACAGTTGACTTCTCGCAGAGTCAACTTGGTCATAGTAATTTTCGCGAATGTCAGATTAGAAATTCAAACTTCGATAATTGTTATCTTTACGCTTCGCACTTCACCAGAGCAGAGTTTCTGTCTGCCAAAGAAATATCA > NC_000913/4251188‑4251386 | caATGTGATTTTTATCAAAGCGAGTGGTGAATGTGTCGATTTCAGCAAAAATATTCTTGATACAGTTGACTTCTCGCAGAGTCAACTTGGTCATAGTAAt > 2:1469567/1‑100 (MQ=255) gtgATTTTTATCAAAGCGAGTGGTGAATGTGTCGATTTCAGCAAAAATATTCTTGATACAGTTGACTTCTCGCAGAGTCAACTTGGTCATAGTAACTTTc > 1:2692944/1‑100 (MQ=255) tgATTTTTATCAAAGCGAGTTGTGAATGTGTCGATTTCAGCAAAAATATTCTTGATACAGTTGACTTCTCGCAGAGTCAACTTGGTCATAGTAATTTTcg < 2:214488/100‑1 (MQ=255) tgATTTTTATCAAAGCGAGTGGTGAATGTGTCGATTTCAGCAAAAATATTCTTGATACAGTTGACTTCTCGCAGAGTCAACTTGGTCATAGTAACTTTcg < 2:1568512/100‑1 (MQ=255) gATTTTTATCAAAGCGAGTGGTGAATGTGTCGATTTCAGCAAAAATATTCTTGATACAGTTGACTTCTCGCAGAGTCAACTTGGTCATAGTAACTTTcgc > 1:522596/1‑100 (MQ=255) aTTTTTATCAAAGCGAGTGGTGAATGTGTCGATTTCAGCAAAAATATTCTTGATACAGTTGACTTCTCGCAGAGTCAACTTGGTCATAGTAATTTTcgcg < 1:899736/100‑1 (MQ=255) tttttATCAAAGCGAGTGGTGAATGTGTCGATTTCAGCAAAAATATTCTTGATACAGTTGACTTCTCGCAGAGTCAACTTGGTCATAGTAATTTTCGCGa > 2:3426866/1‑100 (MQ=255) tttttATCAAAGCGAGTGGTGAATGTGTCGATTTCAGCAAAAATATTCTTGATACAGTTGACTTCTCGCAGAGTCAACTTGGTCATAGTAACTTTCGCGa > 1:595312/1‑100 (MQ=255) ttttATCAAAGCGAGTGGTGAATGTGTCGATTTCAGCAAAAATATTCTTGATACAGTTGACTTCTCGCAGAGTCAACTTGGTCATAGTAACTTTCGCGaa < 2:3671570/100‑1 (MQ=255) ttATCAAAGCGAGTTGTGAATGTGTCGATTACAGCAAAAATATTCTTGATACAGTTGACTTCTCGCAGAGTCAACTTGGTCATAGTAACTTTCGCGAATg < 2:3553537/100‑1 (MQ=255) ttATCAAAGCGAGTGGTGAATGTGTCGATTTCAGCAAAAATATTCTTGATACAGTTGACTTCTCGCAGAGTCAACTTGGTCATAGTAATTTTCGCGAATg < 2:3963525/100‑1 (MQ=255) ttATCAAAGCGAGTGGTGAATGTGTCGATTTCAGCAAAAATATTCTTGATACAGTTGACTTCTCGCAGAGTCAACTTGGTCATAGTAACTTTTGCGAATg < 1:2168478/100‑1 (MQ=255) aTCAAAGCGAGTGGTGAATGTGTCGATTTCAGCAAAAATATTCTTGATACAGTTGACTTCTCGCAGAGTCAACTTGGTCATAGTAATTTTCGCGAATGTc > 1:4012984/1‑100 (MQ=255) cAAAGCGAGTGGTGAATGTGTCGATTTCAGCAAAAATATTCTTGATACAGTTGACTTCTCGCAGAGTCAACTTGGTCATAGTAATTTTCGCGAATGTCAg > 1:1023101/1‑100 (MQ=255) cAAAGCGAGTGGTGAATGTGTCGATTTCAGCAAAAATATTCTTGATACAGTTGACTTCTCGCAGAGTCAACTTGGTCATAGTAATTTTCGCGAATGTCAg > 2:2371965/1‑100 (MQ=255) cAAAGCGAGTGGTGAATGTGTCGATTTCAGCAAAAATATTCTTGATACAGTTGACTTCTCGCAGAGTCAACTTGGTCATAGTAATTTTCGCGAATGTCAg > 1:1483375/1‑100 (MQ=255) cAAAGCGAGTGGTGAATGTGTCGATTTCAGCAAAAATATTCTTGATACAGTTGACTTCTCGCAGAGTCAACTTGGTCATAGTAACTTTCGCGAATGTCAg < 2:1420014/100‑1 (MQ=255) aaaGCGAGTGGTGAATGTGTCGATTTCAGCAAAAATATTCTTGATACAGTTGACTTCTCGCAGAGTCAACTTGGTCATAGTAATTTTCGCGAATGTCAGa > 2:464777/1‑100 (MQ=255) aaaGCGAGTGGTGAATGTGTCGATTTCAGCAAAAATATTCTTGATACAGTTGACTTCTCGCAGAGTCAACTTGGTCATAGTAATTTTCGCGAATGTCAGa > 2:2527557/1‑100 (MQ=255) aaaGCGAGTGGTGAATGTGTCGATTTCAGCAAAAATATTCTTGATACAGTTGACTTCTCGCAGAGTCAACTTGGTCATAGTAACTTTCGCGAATGTCAGa > 2:90244/1‑100 (MQ=255) aaaGCGAGTGGTGAATGTGTCGATTTCAGCAAAAATATTCTTGATACAGTTGACTTCTCGCAGAGTCAACTTGGTCATAGTAACTTTCGCGAATGTCAGa < 1:465251/100‑1 (MQ=255) cGAGTGGTGAATGTGTCGATTTCAGCAAAAATATTCTTGATACAGTTGACTTCTCGCAGAGTCAACTTGGTCATAGTAATTTTCGCGAATGTCAGATTAg > 2:1634757/1‑100 (MQ=255) ggtgAATGTGTCGATTTCAGCAAAAATATTCTTGATACAGTTGACTTCTCGCAGAGTCAACTTGGTCATAGTAACTTTCGCGAATGTCAGATTAGAAAtt < 1:3037342/100‑1 (MQ=255) gAATGTGTCGATTTCAGCAAAAATATTCTTGATACAGTTGACTTCTCGCAGAGTCAACTTGGTCATAGTAACTTTCGCGAATGTCAGATTAGAAATTCaa > 2:1964582/1‑100 (MQ=255) aaTGTGTCGATTTCAGCAAAAATATTCTTGATACAGTTGACTTCTCGCAGAGTCAACTTGGTCATAGTAACTTTCGCGAATGTCAGATTAGAAATTCaaa > 1:2993954/1‑100 (MQ=255) aTGTGTCGATTTCAGCAAAAATATTCTTGATACAGTTGACTTCTCGCAGAGTCAACTTGGTCATAGTAATTTTCGCGAATGTCAGATTAGAAATTCAAAc > 1:922208/1‑100 (MQ=255) aTGTGTCGATTTCAGCAAAAATATTCTTGATACAGTTGACTTCTCGCAGAGTCAACTTGGTCATAGTAATTTTCGCGAATGTCAGATTAGAAATTCAAAc < 1:4128577/100‑1 (MQ=255) aTGTGTCGATTTCAGCAAAAATATTCTTGATACAGTTGACTTCTCGCAGAGTCAACTTGGTCATAGTAACTTTCGCGAATGTCAGATTAGAAATTCAAAc > 2:3810659/1‑100 (MQ=255) aTGTGTCGATTTCAGAAAAAATATTCTTGATACAGTTGACTTCTCGCAGAGTCAACTTGGTCATAGTAATTTTCGCGAATGTCAGATTAGAAATTCAAAc < 2:3417986/100‑1 (MQ=255) tgtgTCGATTTCAGCAAAAATATTCTTGATACAGTTGACTTCTCGCAGAGTCAACTTGGTCATAGTAATTTTCGCGAATGTCAGATTAGAAATTCAAACt < 1:710688/100‑1 (MQ=255) tgtgTCGATTTCAGCAAAAATATTCTTGATACAGTTGACTTCTCGCAGAGTCAACTTGGTCATAGTAACTTTCGCGAATGTCAGATTAGAAATTCAAACt > 2:3193956/1‑100 (MQ=255) gtCGATTTCAGCAAAAATATTCTTGATACAGTTGACTTCTCGCAGAGTCAACTTGGTCATAGTAATTTTCGCGAATGTCAGATTAGAAATTCAAACTTCg < 1:3940912/100‑1 (MQ=255) gtCGATTTCAGCAAAAATATTCTTGATACAGTTGACTTCTCGCAGAGTCAACTTGGTCATAGTAATTTTCGCGAATGTCAGATTAGAAATTCAAACTTCg < 2:1820117/100‑1 (MQ=255) gtCGATTTCAGCAAAAATATTCTTGATACAGTTGACTTCTCGCAGAGTCAACTTGGTCATAGTAACTTTCGCGAATGTCAGATTAGAAATTCAAACTTCg > 2:4048837/1‑100 (MQ=255) tCGATTTCAGCAAAAATATTCTTGATACAGTTGACTTCTCGCAGAGTCAACTTGGTCATAGTAATTTTCGCGAATGTCACATTAGAAATTCAAACTTCGa > 2:1226428/1‑100 (MQ=255) tCGATTTCAGCAAAAATATTCTTGATACAGTTGACTTCTCGCAGAGTCAACTTGGTCATAGTAACTTTCGCGAATGTCAGATTAGAAATTCAAACTTCGa < 1:1275267/100‑1 (MQ=255) cGATTTCAGCAAAAATATTCTTGATACAGTTGACTTCTCGCAGAGTCAACTTGGTCATAGTAATTTTCGCGAATGTCAGATTAGAAATTCAAACTTCGAt > 1:3262986/1‑100 (MQ=255) cGATTTCAGCAAAAATATTCTTGATACAGTTGACTTCTCGCAGAGTCAACTTGGTCATAGTAACTTTCGCGAATGTCAGATTAGAAATTCAAACTTCGAt > 1:1908970/1‑100 (MQ=255) cGATTTCAGCAAAAATATTCTTGATACAGTTGACTTCTCGCAGAGTCAACTTGGTCATAGTAACTTTCGCGAATGTCAGATTAGAAATTCAAACTTCGAt > 1:3487455/1‑100 (MQ=255) aTTTCAGCAAAAATATTCTTGATACAGTTGACTTCTCGCAGAGTCAACTTGGTCATAGTAATTTTCGCGAATGTCAGATTAGAAATTCAAACTTCGATaa > 1:644926/1‑100 (MQ=255) aTTTCAGCAAAAATATTCTTGATACAGTTGACTTCTCGCAGAGTCAACTTGGTCATAGTAATTTTCGCGAATGTCAGATTAGAAATTCAAACTTCGATa > 2:3076910/1‑99 (MQ=255) tCAGCAAAAATATTCTTGATACAGTTGACTTCTCGCAGAGTCAACTTGGTCATAGTAACTTTCGCGAATGTCAGATTAGAAATTCAAACTTCGATAATTg < 1:3596251/100‑1 (MQ=255) aGCAAAAATATTCTTGATACAGTTTACTTCTCGCAGAGTCAACTTGGTCATAGTAATTTTCGCGAATGTCAGATTAGAAATTCAAACTTCGATAATTg < 2:2767548/98‑1 (MQ=255) aGCAAAAATATTCTTGATACAGTTGACTTCTCGCAGAGTCAACTTGGTCATAGTAACTTTCGCGAATGTCAGATTAGAAATTCAAACTTCGATAATTGtt > 1:3831565/1‑100 (MQ=255) gCAAAAATATTCTTGATACAGTTGACTTCTCGCAGAGTCAACTTGGTCATAGTAATTTTCGCGAATGTCAGATTAGAAATTCAAACTTCGATAATTGTTa < 1:3228025/100‑1 (MQ=255) gCAAAAATATTCTTGATACAGTTGACTTCTCGCAGAGTCAACTTGGTCATAGTAACTTTCGCGAATGTCAGATTAGAAATTCAAACTTCGATAATTGTTa > 1:3365637/1‑100 (MQ=255) gCAAAAATATTCTTGATACAGTTGACTTCTCGCAGAGTCAACTTGGTCATAGTAACTTTCGCGAATGTCAGATTAGAAATTCAAACTTCGATAATTGTTa > 1:959197/1‑100 (MQ=255) cAAAAATATTCTTGATACAGTTGACTTCTCGCAGAGTCAACTTGGTCATAGTAATTTTCGCTAATGTCGGATTAGAAATTCAAACTTCGATAATTGTTAt > 1:3714703/1‑100 (MQ=255) cAAAAATATTCTTGATACAGTTGACTTCTCGCAGAGTCAACTTGGTCATAGTAACTTTCGCGAATGTCAGATTAGAAATTCAAACTTCGATAATTGTTAt > 2:3751840/1‑100 (MQ=255) aaaaaTATTCTTGATACAGTTGACTTCTCGCAGAGTCAACTTGGTCATAGTAATTTTCGCGAATGTCAGATTAGAAATTCAAACTTCGATAATTGTTATc < 1:2073212/100‑1 (MQ=255) aaaaaTATTCTTGATACAGTTGACTTCTCGCAGAGTCAACTTGGTCATAGTAATTTTCGCGAATGTCAGATTAGAAATTCAAACTTCGATAATTGTTATc < 1:3205684/100‑1 (MQ=255) aaaaTATTCTTGATACAGTTGACTTCTCGCAGAGTCAACTTGGTCATAGTAATTTTCGCGAATGTCAGATTAGAAATTCAAACTTCGATAATTGTTATc < 2:1766656/99‑1 (MQ=255) aaaaTATTCTTGATACAGTTGACTTCTCGCAGAGTCAACTTGGTCATAGTAACTTTCGCGAATGTCAGATTAGAAATTCAAACTTCGATAATTGTTATCt > 2:1702317/1‑100 (MQ=255) atatTCTTGATACAGTTGACTTTTCGCAGAGTCATATTGGTCATAGTAACTTTCGCGAATGTCAGATTAGAAATTCAAACTTCGATAATTGTTATCttt < 2:819843/99‑1 (MQ=255) atatTCTTGATACAGTTGACTTCTCGCAGAGTCAACTTGGTCATAGTAACTTTCGCGAATGTCAGATTAGAAATTCAAACTTCGATAATTGTTATCTTTa < 1:725367/100‑1 (MQ=255) ttCTTGATACAGTTGACTTCTCGCAGAGTCAACTTGGTCATAGTAACTTTCGCGAATGTCAGATTAGAAATTCAAACTTCGATAATTGTTATCTTTACGc < 2:727324/100‑1 (MQ=255) ttCTTGATACAGTTGACTTCTCGCAGAGTCAACTTGGTCATAGTAACTTTCGCGAATGTCAGATTAGAAATTCAAACTTCGATAATTGTTATCTTTACGc > 1:2890755/1‑100 (MQ=255) cTTGATACAGTTGACTTCTCGCAGAGTCAACTTGGTCATAGTAATTTTCGCGAATGTCAGATTAGAAATTCAAACTTCGATAATTGTTATCTTTACGCtt > 1:1587037/1‑100 (MQ=255) gATACAGTTGACTTCTCGCAGAGTCAACTTGGTCATAGTAATTTTCGCGAATGTCAGATTAGAAATTCAAACTTCGATAATTGTTATCTTTACGCTTCGc > 2:2749731/1‑100 (MQ=255) gATACAGTTGACTTCTCGCAGAGTCAACTTGGTCATAGTAATTTTCGCGAATGTCAGATTAGAAATTCAAACTTCGATAATTGTTATCTTTACGCTTCGc < 2:2939085/100‑1 (MQ=255) gATACAGTTGACTTCTCGCAGAGTCAACTTGGTCATAGTAACTTTCGCGAATGTCAGATTAGAAATTCAAACTTCGATAATTGTTATCTTTACGCTTCGc < 2:1152355/100‑1 (MQ=255) gATACAGTTGACTTCTCGCAGAGTCAACTTGGTCATAGTAACTTTCGCGAATGTCAGATTAGAAATTCAAACTTCGATAATTGTTATCTTTACGCTTCGc < 1:1657877/100‑1 (MQ=255) gATACAGTTGACTCCTCGCAGAGTCAAATTGGTCATAGTAACTTTCGCGAATGTCAGATTAGAAATTCAAACTTCGATAATTGTTATCTTTACGCTTCGc < 2:1104552/100‑1 (MQ=255) tACAGTTGACTTCTCGCAGAGTCAACTTGGTCATAGTAATTTTCGCGAATGTCAGATTAGAAATTCAAACTTCGATAATTGTTATCTTTACGCTTCGCAc > 1:2965719/1‑100 (MQ=255) tACAGTTGACTTCTCGCAGAGTCAACTTGGTCATAGTAACTTTCGCGAATGTCAGATTAGAAATTCAAACTTCGATAATTGTTATCTTTACGCTTCGCAc < 2:1392851/100‑1 (MQ=255) tACAGTTGACTTCTCGCAGAGTCAACTTGGTCATAGTAACTTTCGCGAATGTCAGATTAGAAATTCAAACTTCGATAATTGTTATCTTTACGCTTCGCAc < 1:3578402/100‑1 (MQ=255) cAGTTGACTTCTCGCAGAGTCAACTTGGTCATAGTAATTTTCGCGAATGTCAGATTAGAAATTCAAACTTCGATAATTGTTATCTTTACGCTTCGCACtt > 2:352131/1‑100 (MQ=255) cAGTTGACTTCTCGCAGAGTCAACTTGGTCATAGTAATTTTCGCGAATGTCAGATTAGAAATTCAAACTTCGATAATTGTTATCTTTACGCTTCGCACtt > 1:3347700/1‑100 (MQ=255) cAGTTGACTTCTCGCAGAGTCAACTTGGTCATAGTAACTTTCGCGAATGTCAGATTAGAAATTCAAACTTCGATAATTGTTATCTTTACGCTTCGCACtt > 1:1436737/1‑100 (MQ=255) gTTGACTTCTCGCAGAGTCAACTTGGTCATAGTAACTTTCGCGAATGTCAGATTAGAAATTCAAACTTCGATAATTGTTATCTTTACGCTTCGCACTTCa > 2:3335923/1‑100 (MQ=255) tGACTTCTCGCAGAGTCAACTTGGTCATAGTAATTTTCGCGAATGTCAGATTAGAAATTCAAACTTCGATAATTGTTATCTTTACGCTTCGCACTTCAcc < 2:2171825/100‑1 (MQ=255) tGACTTCTCGCAGAGTCAACTTGGTCATAGTAATTTTCGCGAATGTCAGATTAGAAATTCAAACTTCGATAATTGTTATCTTTACGCTTCGCACTTCAcc < 2:3224998/100‑1 (MQ=255) tGACTTCTCGCAGAGTCAACTTGGTCATAGTAACTTTCGCGAATGTCAGATTAGAAATTCAAACTTCGATAATTGTTATCTTTACGCTTCGCACTTCAcc < 1:1968337/100‑1 (MQ=255) aCTTCTCGCAGAGTCAACTTGGTCATAGTAACTTTCGCGAATGTCAGATTAGAAATTCAAACTTCGATAATTGTTATCTTTACGCTTCGCACTTCACcag < 2:3284008/100‑1 (MQ=255) cTTCTCGCAGAGTCAACTTGGTCATAGTAATTTTCGCGAATGTCAGATTAGAAATTCAAACTTCGATAATTGTTATCTTTACGCTTCGCACTTCACcaga > 2:1304152/1‑100 (MQ=255) cTTCTCGCAGAGTCAACTTGGTCATAGTAATTTTCGCGAATGTCAGATTAGAAATTCAAACTTCGATAATTGTTATCTTTACGCTTCGCACTTCACcaga > 1:2800636/1‑100 (MQ=255) ttCTCGCAGAGTCAACTTGGTCATAGTAATTTTCGCGAATGTCAGATTAGAAATTCAAACTTCGATAATTGTTATCTTTACGCTTCGCACTTCACcagag < 1:3172914/100‑1 (MQ=255) tctcGCAGAGTCAACTTGGTCATAGTAATTTTCGCGAATGTCAGATTAGAAATTCAAACTTCGATAATTGTTATCTTTACGCTTCGCACTTCACcagagc < 2:1918509/100‑1 (MQ=255) ctcGCAGAGTCAACTTGGTCATATGAACTTTCTCGAATGTCAGATTAGAAATTCAAACTGCGATAATTGTTATCTTTACGCTTCGCACTTCACcagagca > 2:3449087/1‑100 (MQ=255) ctcGCAGAGTCAACTTGGTCATAGTAATTTTCGCGAATGTCAGATTAGAAATTCAAACTTCGATAATTGTTATCTTTACGCTTCGCACTTCACcagagca > 1:1837574/1‑100 (MQ=255) tcGCAGAGTCAACTTGGTCATAGTAATTTTCGCGAATGTCAGATTAGAAATTCGAACTTCGATAATTGTTATCTTTACGCTTCGCACTTCACcagagcag < 2:2284616/100‑1 (MQ=255) cGCAGAGTCAACTTGGTCATAGTAATTTTCGCGAATGTCAGATTAGAAATTCAAACTTCGATAATTGTTATCTTTACGCTTCGCACTTCACcagagcaga > 2:2299750/1‑100 (MQ=255) cGCAGAGTCAACTTGGTCATAGTAATTTTCGCGAATGTCAGATTAGAAATTCAAACTTCGATAATTGTTATCTTTACGCTTCGCACTTCACcagagcag > 1:823238/1‑99 (MQ=255) gCAGAGTCAACTTGGTCATAGTAATTTTCGCGAATGTCAGATTAGAAATTCAAACTTCGATAATTGTTATCTTTACGCTTCGCACTTCACcagagcagag < 1:13625/100‑1 (MQ=255) gagTCAACTTGGTCATAGTAATTTTCGCGAATGTCAGATTAGAAATTCAAACTTCGATAATTGTTATCTTTACGCTTCGCACTTCACCAGAGCAGAGttt < 1:3543136/100‑1 (MQ=255) agTCAACTTGGTCATAGTAATTTTCGCGAATGTCAGATTAGAAATTCAAACTTCGATAATTGTTATCTTTACGCTTCGCACTTCACCAGAGCAGAGTTtc < 1:1156563/100‑1 (MQ=255) cAACTTGGTCATAGTAATTTTCGCGAATGTCAGATTAGAAATTCAAACTTCGATAATTGTTATCTTTACGCTTCGCACTTCACCAGAGCAGAGTTtctgt > 2:1575616/1‑100 (MQ=255) cAACTTGGTCATAGTAATTTTCGCGAATGTCAGATTAGAAATTCAAACTTCGATAATTGTTATCTTTACGCTTCGCACTTCACCAGACCAGAGTTtctgt > 1:761759/1‑100 (MQ=255) cAACTTGGTCATAGTAACTTTCGCGAATGTCAGATTAGAAATTCAAACTTCGATAATTGTTATCTTTACGCTTCGCACTTCACCAGAGCAGAGTTtctgt > 1:2457873/1‑100 (MQ=255) aaCTTGGTCATAGTAATTTTCGCGAATGTCAGATTAGAAATTCAAACTTCGATAATTGTTATCTTTACGCTTCGCACTTCACCAGAGCAGAGTTtctgtc < 2:1675967/100‑1 (MQ=255) cTTGGTCATAGTAATTTTCGCGAATGTCAGATTAGAAATTCAAACTTCGATAATTGTTATCTTTACGCTTCGCACTTCACCAGAGCAGAGTTtctgtctg > 2:2697502/1‑100 (MQ=255) gTCATAGTAACTTTCGCGAATGTCAGATTAGAAATTCAAACTTCGATAATTGTTATCTTTACGCTTCGCACTTCACCAGAGCAGAGTTTCTGTCTGCCaa > 1:2317621/1‑100 (MQ=255) cATAGTAATTTTCGCGAATGTCAGATTAGAAATTCAAACTTCGATAATTGTTATCTTTACGCTTCGCACTTCACCAGAGCAGAGTTTCTGTCTGCCAAAg > 2:659887/1‑100 (MQ=255) cATAGTAACTTTCGCGAATGTCAGATTAGAAATTCAAACTTCGATAATTGTTATCTTTACGCTTCGCACTTCACCAGAGCAGAGTTTCTGTCTGCCAAAg > 1:4019205/1‑100 (MQ=255) tAGTAATTTTCGCGAATGTCAGATTAGAAATTCAAACTTCGATAATTGTTATCTTTACGGTTCGCAATTCACCAGAGCAGAGTTTCTGTCTGCCAAAGaa < 2:1039578/100‑1 (MQ=255) tAGTAATTTTCGCGAATGTCAGATTAGAAATTCAAACTTCGATAATTGTTATCTTTACGCTTCGCACTTCACCAGAGCAGAGTTTCTGTCTGCCAAAGaa < 2:969419/100‑1 (MQ=255) aGTAATTTTCGCGAATGTCAGATTAGAAATTCAAACTTCGATAATTGTTATCTTTACGCTTCGCACTTCACCAGAGCAGAGTTTCTGTCTGCCAAAGaaa < 1:2559694/100‑1 (MQ=255) aGTAACTTTCGCGAATGTCAGATTAGAAATTCAAACTTCGATAATTGTTATCTTTACGCTTCGCACTTCACCAGAGCAGAGTTTCTGTCTGCCAAAGaaa > 2:2053655/1‑100 (MQ=255) aGTAACTTGCGCGAATGTCAGATTAGAAATTCAAACTTCGATAATTGTTATCTTTACGCTTCGCACTTCACCAGAGCAGAGTTTCTGTCTGCCAAAGa > 2:223704/1‑98 (MQ=255) tAATTTTCGCGAATGTCAGATTAGAAATTCAAACTTCGATAATTGTTATCTTTACGCTTCGCACTTCACCAGAGCAGAGTTTCTGTCTGCCAAAGAAata < 2:2800620/100‑1 (MQ=255) | CAATGTGATTTTTATCAAAGCGAGTGGTGAATGTGTCGATTTCAGCAAAAATATTCTTGATACAGTTGACTTCTCGCAGAGTCAACTTGGTCATAGTAATTTTCGCGAATGTCAGATTAGAAATTCAAACTTCGATAATTGTTATCTTTACGCTTCGCACTTCACCAGAGCAGAGTTTCTGTCTGCCAAAGAAATATCA > NC_000913/4251188‑4251386 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |