| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 4,356,446 | A→T | 15.3% | intergenic (‑35/+24) | dtpC ← / ← cadA | dipeptide and tripeptide permease/lysine decarboxylase, acid‑inducible |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,356,446 | 0 | A | T | 15.3% | 591.4 / 91.0 | 232 | intergenic (‑35/+24) | dtpC/cadA | dipeptide and tripeptide permease/lysine decarboxylase, acid‑inducible |
| Reads supporting (aligned to +/- strand): ref base A (99/96); new base T (16/19); total (116/116) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.14e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.84e-01 | |||||||||||
Only 100 of 236 total aligned reads displayed.
AGTACTCCCAGATTTGGATCGCCACGATATAGTATATCGCGCGCGGCTGTGAGGGTGTTTTCATGTGTTCTCCTTATGAGCAAAAAAGGGAAGTGGCAAGCCACTTCCCTTGTACGAGCTAATTATTTTTTGCTTTCTTCTTTCAATACCTTAACGGTATAGCGGCCATCAGCCTGACGGTATGCACCGTGAATATCG > NC_000913/4356348‑4356545 | gTACTCCCAGATTTGGATCGCCACGATATAGTATATCGCGCGCGGCTGTGAGGGTGTTTTCATGTGTTCTAATTATAAAAAAAAAAGGGAAGTGGCAAg < 2:2136640/99‑1 (MQ=38) cTCCCAGATTTGGATCGCCACGATATAGTATATCGCGCGCGGCTGTGAGGGTGTTTTCATGTGTTCTCCTTATGAGCAAAAAAGGGAAGTGGCAAGCCAc > 1:1661843/1‑100 (MQ=255) tCCCAGATTTGGATCGCCACGATATAGTATATCGCGCGCGGCTGTGAGGGTGTTTTCATGTGTTCTCCTTATGAGCAAAAAAGGGAAGTGGCAAGCCACt > 1:1391125/1‑100 (MQ=255) cccAGATTTGGATGGCCACGATATAGTATATCGCGCGCGGCTGTGAGGGTGTTTTCATGTGTTCTCCTTATGAGCAAAAAAGGGAAGTGGCAAGCCACtt > 1:2802403/1‑100 (MQ=255) cccAGATTTGGATCGCCACGATATAGTATATCGCGCGCGGCTGTGAGGGTGTTTTCATGTGTTCTCCTTATGAGCAAAAAAGGGAAGTGGCAAGCCACtt > 1:737897/1‑100 (MQ=255) cccAGATTTGGATCGCCACGATATAGTATATCGCGCGCGGCTGTGAGGGTGTTTTCATGTGTTCTCCTTATGAGCAAAAAAGGGAAGTGGCAAGCCACtt > 1:3256307/1‑100 (MQ=255) ccAGATTTGGATCGCCACGATATAGTATATCGCGCGCGGCTGTGAGGGTGTTTTCATGTGTTCTCCTTATGAGCAAAAAAGGGAAGTGGCAAGCCACTTc < 1:2906988/100‑1 (MQ=255) cttccgatctCGCCACGATATAGTATATCGCGCGCGGCTGTGAGGGTGTTTTCATGTGTTCTCCTTATGAGCAAAAAAGGGAAGTGGCTTGCCACTTccc < 2:4081098/91‑1 (MQ=255) aGATTTGGCGAGCCACGCTATAGTATATCGCGCGCGGCTGTGAGGGTGTTTTCATGTGTTCTCCTTATGAGCAAAAAAGGGAAGTGGCTTGCCAGTTcct < 2:2353750/100‑2 (MQ=255) aGATTTGGATCGCCACGATATAGTATATCGCGCGCGGCTGTGAGGGTGTTTTCATGTGTTCTCCTTATGAGCAAAAAAGGGAAGTGGCAAGCCACTTccc < 1:3077532/100‑1 (MQ=255) gATTTGGATCGCCACGATATAGTATATCGCGCGTGGCTGTGAGGGTGTTTTCATGTGTTCTCCTTATGAGCAAAAAAGGGAAGTGGCTTGCCACTTcc < 1:2592016/98‑1 (MQ=255) gATTTGGATCGCCACGATATAGTATATCGCGCGCGGCTGTGAGGGTGTTTTCATGTGTTCTCCTTATGAGCAAAAAAGGGAAGTGGCAAGCCACTTCCCt < 1:672449/100‑1 (MQ=255) aTTTGGATCGCCACGATATAGTATATCGCGCGCTGCTGTGAGGGTGTTTTCATGTGTTCTCCTTATGAGCAAAAAAGGGAAGTGGCTTGCCACTTCCCtt < 1:437124/100‑1 (MQ=39) aTTTGGATCGCCACGATATAGTATATCGCGCGCGGCTGTGAGGGTGTTTTCATGTGTTCTCCTTATGAGCAAAAAAGGGAAGTGGCTTGCCACTTCCCtt < 1:3583237/100‑1 (MQ=255) aTTTGGATCGCCACGATATAGTATATCGCGCGCGGCTGTGAGGGTGTTTTCATGTGTTCTCCTTATGAGCAAAAAAGGGAAGTGGCTTGCCACTTCCCtt < 1:2184360/100‑1 (MQ=255) aTTTGGATCGCCACGATATAGTATATCGCGCGCGGCTGTGAGGGTGTTTTCATGTGTTCTCCTTATGAGCAAAAAAGGGAAGTGGCTTGCCACTTCCCtt < 2:2286435/100‑1 (MQ=255) aTTTGGATCGCCACGATATAGTATATCGCGCGCGGCTGTGAGGGTGTTTTCATGTGTTCTCCTTATGAGCAAAAAAGGGAAGTGGCAAGCCACTTCCCtt < 1:3305553/100‑1 (MQ=255) aTTTGGATCGCAACGATATAGTATATCGCGCGCGGCTGTGAGGGTGTTTTCATGTGTTCTCCTTATGAGCAAAAAAGGGAAGTGGCTTGCCACTTCCCtt < 1:3404218/100‑1 (MQ=39) ttGGATCGCCACGATATAGTATATCGCGCGCGGCTGTGAGGGTGTTTTCATGTGTTCTCCTTATGAGCAAAAAAGGGAAGTGGCTTGCCACTTCCCtttt < 2:55181/100‑3 (MQ=255) tGGATCGCCACGATATAGTATATCGCGCGCGGCTGTGAGGGTGTTTTCATGTGTTCTCCTTATGAGCAAAAAAGGGAAGTGGCTTGCCACTTCCCttttt < 1:990578/100‑4 (MQ=39) tGGATCGCCACGATAGAGTATATCGCGCGCGGCTGTGAGGGTGTTTTCATGTGTTCTCCTTATGAGCAAAAAAGGGAAGTGGCAAGCCACTTCCCTTGTa < 2:961308/100‑1 (MQ=255) gATCGCCACGATATAGTATATCGCGCGCGGCTGTGAGGGTGTTTTCATGTGTTCTCCTTATGAGCAAAAAAGGGAAGTGGCAAGCCACTTCCCTTGTACg < 2:1406396/100‑1 (MQ=255) aTCGCCACGATATAGTATATCGCGCGCGGCTGTGAGGGTGTTTTCATGTGTTCTCCTTATGAGCAAAAAAGGGAAGTGGCAAGCCACTTCCCTTGTACGa > 2:3176172/1‑100 (MQ=255) tCGCCACGATATAGTATATCGCGCGCGGCTGTGAGGGTGTTTTCATGTGTTCTCCTTATGAGCAAAAAAGGGAAGTGGCAAGCCACTTCCCTTGTACg < 2:1104894/98‑1 (MQ=255) gcgcgcGATATACTATATCGCGCGCGGCTGTGAGGGTGTTTTCATGTGTTCTCCTTATGAGCAAAAAAGGGAAGTGGCAAGCCACTTCCCTTGTACGAGc > 1:909318/6‑100 (MQ=255) cGCCACGATATAGTATATCGCGCGCGGCTGTGAGGGTGTTTTCATGTGTTCTCCTTATGAGCAAAAAAGGGAAGTGGCTTGCCACTTcccagatcggaag > 1:4081125/1‑90 (MQ=255) cGCCACGATATAGTATATCGCGCGCGGCTGTGAGGGTGTTTTCATGTGTTCTCCTTATGAGCAAAAAAGGGAAGTGGCAAGCCACTTCCCTTGTACGAGc > 1:4101774/1‑100 (MQ=255) gCCACGATATAGTATATCGCGCGCGGCTGTGAGGGTGTTTTCATGTGTTCTCCTTATGAGCAAAAAAGGGAAGTGGCTTGCCACTTCCCttttttgctca < 1:486274/100‑10 (MQ=37) gCCACGATATAGTATATCGCGCGCGGCTGTGAGGGTGTTTTCATGTGTTCTCCTTATGAGCAAAAAAGGGAAGTGGCAAGCCACTTCCCTTGTACGAGCt > 2:1573810/1‑100 (MQ=255) gCCACGATATAGTATATCGCGCGCGGCTGTGAGGGTGTTTTCATGTGTTCTCCTTATGAGCAAAAAAGGGAAGTGGCAAGCCACTTCCCTTGTACGAGCt > 2:1286372/1‑100 (MQ=255) ccACGATATAGTATATCGCGCGCGGCTGTGAGGGTGTTTTCATGTGTTCTCCTTATGAGCAAAAAAGGGAAGTGGCAAGCCACTTCCCTTGTACGAGCTa < 1:3951305/100‑1 (MQ=255) aCGATATAGTATATCGCGCGCGGCTGTGAGGGTGTTTTCATGTGTTCTCCTTATGAGCAAAAAAGGGAAGTGGCAAGCCACTTCCCTTGTACGAGCTAat > 1:249349/1‑100 (MQ=255) aCGATATAGTATATCGCGCGCGGCTGTGAGGGTGTTTTCATGTGTTCTCCTTATGAGCAAAAAAGGGAAGTGGCAAGCCACTTCCCTTGTACGAGCTAat < 1:2354550/100‑1 (MQ=255) atatAGTATATCGCGCGCGGCTGTGAGGGTGTTTTCATGTGTTCTCCTTATGAGCAAAAAAGGGAAGTGGCAAGCCACTTCCCTTGTACGAGCTAattat > 1:3344534/1‑100 (MQ=255) tagaGTATATCGTGCAAGGCTGTGAGGTTGGTTTCATGTGTTCTCCTTATGAGCAAAAAAGGGAAGTGGCTTGCCACTTCCCttttttgc < 2:1014249/87‑7 (MQ=21) aGTATATCGCGCGCGGCTGTGAGGGTGTTTTCATGTGTTCTCTTTATGAGCAAAAAAGGGAAGTGGCAAGCCACTTCCCTTGTACGAGCTAATTAtttt > 1:2838892/1‑99 (MQ=255) gTATATCGCTCGCGGCTGTGAGGGTGTTTGCCTGTGTTCTCCTTATGCGCAAAAAAGGGTAGTGGCAGGCCACTTGCCTTGTACGAGCTGATTAttttt > 2:832148/1‑99 (MQ=255) tataTCGCGCGCGGCTGTGAGGGTGTTTTCATGTGTTCTCCTTATGAGCAAAAAAGGGAAGTGGCAAGCCACTTCCCTTGTACGAGCTAATTATTTTTTg < 1:548038/100‑1 (MQ=255) atatCGCGCGCGGCTGTGAGGGTGTTTTCATGTGTTCTCCTTATGAGCAAAAAAGGGAAGTGGCAAGCCACTTCCCTTGTACGAGCTAATTATTTTTTGc < 2:1129344/100‑1 (MQ=255) tatCGCGCGCGGCTGTGAGGGTGTTTTCATGTGTTCTCCTTATGAGCAAAAAAGGGAAGTGGCAAGCCACTTCCCTTGTACGAGCTAATTATTTTTTGCt > 2:3054185/1‑100 (MQ=255) tatCGCGCGCGGCGGTGAGGGTGTTTTCATGTGTTCTCCTTATGAGCAACAAAGGGAAGTGGCAAGCCACTTCCCTTGTACGAGCTAATTATTTTTTgat > 2:2502974/1‑98 (MQ=255) cgcgcgcgGCTGTGAGGGTGTTTTCATGTGTTCTCCTTATGAGCAAAAAAGGGAAGTGGCAAGCCACTTCCCTTGTACGAGCTAATTATTTTTTGCTttc > 1:173871/1‑100 (MQ=255) cttccgatcTGTGAGGGTGTTTTCATGTGTTCTCCTTATGAGCAAAAAAGGGAAGTGGCAAGCCACTTCCCTTGTACGAGCTAATTATTTTTTGCTttct < 1:1109083/92‑1 (MQ=255) cgcgcgGCTGTGAGGGTGTTTTCATGTGTTCTCCTTATGAGCAAAAAAGGGAAGTGGCAAGCCACTTCCCTTGTACGCGCTAATTATTTTTTGCTttctt > 2:1801284/1‑100 (MQ=255) gcgcgGCTGTGAGGGTGTTTTCATGTGTTCTCCTTATGAGCAAAAAAGGGAAGTGGCAAGCCACTTCCCTTGTACGAGCTAATTATTTTTTGCTttcttc < 1:162594/100‑1 (MQ=255) gcgGCTGTGAGGGTGTTTTCATGTGTTCTCCTTATGAGCAAAAAAGGGAAGTGGCAAGCCACTCCCCTTGTACGAGCTAATTATTTTTTGCTTTcttctt > 2:3394325/1‑100 (MQ=255) cgacTGTCAAGGTGCTTTCATGTGTACTCCTTATGAGCAAAATATGGATGTGGCAAGCCACTTCCCTTGTACGAGCTAATTATTATCTGCTttcttc < 2:1658835/94‑1 (MQ=255) cgGCTGTGAGGGTGTTTTCATGTGTTCTCCTTATGAGCAAAAAAGGGAAGTGGCAAGCCACTTCCCTTGTACGAGCTAATTATTTTTTGCTTTCTTCttt > 1:2020548/1‑100 (MQ=255) cgGCTGTGAGGGTGTTTTCATGTGTTCTCCTTATGAGCAAAAAAGGGAAGTGGCAAGCCACTTCCCTTGTACGAGCTAATTATTTTTTGCTTTCTTCttt < 1:1901291/100‑1 (MQ=255) cgGCTGTGAGGGTGTTTTCATGTGTTCTCCTTATGAGCAAAAAAGGGAAGTGGCAAGCCACTTCCCTTGTACGAGCTAATTATTTTTTGCTTTCTTCttt > 1:777340/1‑100 (MQ=255) ggCTGTGAGGGTGTTTTCATGTGTTCTCCTTATGAGCAAAAAAGGGAAGTGGCAAGCCACTTCCCTTGTACGAGCTAATTATTTTTTGCTTTCTTCTTTc < 1:1451647/100‑1 (MQ=255) ggCTGTGAGGGTGTTTTCATGTGTTCTCCTTATGAGCAAAAAAGGGAAGTGGCAAGCCACTTCCCTTGTACGAGCTAATTATTTTTTGCTTTCTTCTTTc < 2:667585/100‑1 (MQ=255) ggCTGTGAGGGTGTTTTCATGTGTTCTCCTTATGAGCAAAAAAGGGAAGTGGCAAGCCACTTCCCTTGTACGAGCTAATTATTTTTTGCTTTCTTCTTTc < 1:1208697/100‑1 (MQ=255) gcggtgAGGGTGTTTTCATGTGTTCTCCTTATGAGCAAAAAAGGGAAGTGGCAAGCCACTTCCCTTGTACGAGCTAATTATTTTTTGCTTTCTTCTTTCa < 2:1716431/97‑1 (MQ=255) gCTGTGAGGGTGTTTTCATGTGTTCTCCTTATGAGCAAAAAAGGGAAGTGGCAAGCCACTTCCCTTGTACGAGCTAATTATTTTTTGCTTTCTTCTTTCa > 2:3389929/1‑100 (MQ=255) cTGTGAGGGTGTTTTCATGTGTTCTCCTTATGAGCAAAAAAGGGAAGTGGCAAGCCACTTCCCTTGTACGAGCTAATTATTTTTTGCTTTCTTCTTTCaa > 2:2114980/1‑100 (MQ=255) tgtgAGGGTGTTTTCATGTGTTCTCCTTATGAGCAAAAAAGGGAAGTGGCAAGCCACTCCCCTTGTACGAGCTAATTATTTTTTGCTTTCTTCTTTCAAt < 1:3394345/100‑1 (MQ=255) tgagagaGTGATTTCATATGTTTTTCTTATGAACAAAAAAGGGAAGTGGCAAACCACTTCCATTGTAAGAGCTAATTATTTTTTGCTTTATTATTTCaa > 2:1937717/4‑99 (MQ=255) gtgAGGGTGTTTTCATGTGTTCTCCTTATGTGCAAAAGAGGTAAGTTGCAAGCCACTTCCCTTGTACGAGCTAATTATTTTTTGCTTTCTTCTTTAAATa < 2:1852879/100‑1 (MQ=255) gAGTGTGTTTTCATGTGTTCTCCTTATGAGCAAAAAAGGGTAGTGGCAAGCCACTTCCCTTGTACGAGCTAATTATTTTTTGCTTTCTTCTTTCAATAcc < 2:3807531/100‑1 (MQ=255) gAGGGTGTTTTCATGTGTTCTCCTTATGAGCAAAAAAGGGAAGTGGCAAGCCACTTCCCTTGTACGAGCTAATTATTTTTTGCTTTCTTCTTTCAATAcc > 1:1048137/1‑100 (MQ=255) gAGGGTGTTTTCATGTGTTCTCCTTATGAGCAAAAAAGGGAAGTGGCAAGCCACTTCCCTTGTACGAGCTAATTATTTTTTGCTTTCTTCTTTCAATAcc > 1:3615082/1‑100 (MQ=255) gAGCGTGTTTTCATGTGTTCTCCTTATGAGCAAAAAAGGGAAATGGCAAGCCACTTCCCTTGTACGAGCTAATTATTTTTTGCTTTCTTCTTTCAATAcc < 2:2899121/100‑1 (MQ=255) gggTGTTTTCATGTGTTCTCCTTATGAGCAAAAAAGGGAAGTGGCAAGCCACTTCCCTTGTACGAGCTAATTATTTTTTGCTTTCTTCTTTCAATACCtt > 2:4048772/1‑100 (MQ=255) ggTGTTTTCATGTGTTCTCCTTATGAGCAAAAAAGGGAAGTGGCCAGCCACTTCCCTTGTACGAGCTAATTATTTTTTGCTTTCTTCTTTCAATACCTTa < 1:2660006/100‑1 (MQ=255) ggTGTTTTCATGTGTTCTCCTTATGAGCAAAAAAGGGAAGTGGCAAGCCACTTCCCTTGTACGAGCTAATTATTTTTTGCTTTCTTCTTTCAATACCTTa > 1:2090399/1‑100 (MQ=255) ttttCATGTGTTCTCCTTATGAGCAAAAAAGGGAAGTGGCAAGCCACTTCCCTTGTACGAGCTAATTATTTTTTTCTTTTTTTTTTCAATACATTAACgg > 2:706909/1‑100 (MQ=255) ttCATGTGTTCTCCTTATGAGCAAAAAAGGGAAGTGGCAAGCCACTTCCCTTGTACGAGCTAATTATTTTTTGCTTTCTTCTTTCAATACCTTAACGGta > 1:551986/1‑100 (MQ=255) tgcATGTTTTCGCCTTAGGAGCAAAAAAGGGAAGTGGCAAGCCACTTCCCTTGTACGAGCTAATTATTTTTTGCTTTCTTCTTTCAATACCTTAACgg < 2:1360261/96‑1 (MQ=255) gtgtTCTCCTTATGAGCAAAAAAGGGAAGTGGCAAGCCACTTCCCTTGTACGAGCTAATTATTTTTTGCTTTCTTCTTTCAATACCTTAACGGTATAGCg < 1:1769051/100‑1 (MQ=255) gtTCTCCTTATGAGCAAAAAAGGGAAGTGGCAAGCCACTTCCCTTGTACGAGCTAATTATTTTTTGCTTTCTTCTTTCAATACCTTAACGGTATAGCGGc > 1:357104/1‑100 (MQ=255) gtTCTCCTTATGAGCAAAAAAGGGAAGTGGCAAGCCACTTCCCTTGTACGAGCTAATTATTTTTTGCTTTCTTCTTTCAATACCTTAACGGTATAGCGGc > 1:1219282/1‑100 (MQ=255) ttCTCCTTATGAGCAAAAAAGGGAAGTGGCAAGCCACTTCCCTTGTACGAGCTAATTATTTTTTGCTTTCTTCTTTCAATACCTTAACGGTATAGCGGcc > 2:4104593/1‑100 (MQ=255) tctcCTTATGAGCAAAAAAGGGAAGTGGCAAGCCACTTCCCTTGTACGAGCTAATTATTCTTTGCTTTCTTCTTTCAATACCTTAACGGTATAGCGGCCa > 1:3909722/1‑100 (MQ=255) ctcCTTATGAGCAAAAAAGGGAAGTGGCAAGCCACTTCCCTTGTACGAGCTAATTATTTTTTGCTTTCTTCTTTCAATACCTTAACGGTATAGCGGCCAt < 2:1765085/100‑1 (MQ=255) ccTTATGAGCAAAAAAGGGAAGTGGCAAGCCACTTCCCTTGTACGAGCTAATTATTTTTTGCTTTCTTCTTTCAATACCTTAACGGTATAGCGGCCATCa > 1:1729530/1‑100 (MQ=255) tATGAGCAAAAAAGGGAAGTGGCAAGCCACTTCCCTTGTACGAGCTAATTATTTTTTGCTTTCTTCTTTCAATACCTTAACGGTATAGCGGCCATCAGcc < 2:336631/100‑1 (MQ=255) tATGAGCAAAAAAGGGAAGTGGCAAGCCACTTCCCTTGTACGAGCTAATTATTTTTTGCTTTCTTCTTTCAATACCTTAACGGTATAGCGGCCATCAGcc < 1:2318025/100‑1 (MQ=255) cgatctcAAAAAAGGGAAGTGGCAAGCCACTTCCCTTGTACGAGCTAATTATTTTTTGCTTTCTTCTTTCAATACCTTAACGGTATAGCGGCCATCAGcc < 1:3850922/94‑1 (MQ=255) tGAGCAAAAAAGGGAAGTGGCAAGCCACTTCCCTTGTACGAGCTAATTATTTTTTGCTTTCTTCTTTCAATACCTTAACGGTATAGCGGCCATCAGCCTg > 2:2629375/1‑100 (MQ=255) tGAGCAAAAAAGGGAAGTGGCAAGCCACTTCCCTTGTACGAGCTAATTATTTTTTGCTTTCTTCTTTCAATACCTTAACGGTATAGCGGCCATCAGCCTg > 1:1137162/1‑100 (MQ=255) gctcgtacaaGGGAAGTGGCTTGCCACTTCCCTTGTACGAGCTAATTATTTTTTGCTTTCTTCTTTCAATACCTTAACGGTATAGCGGCCATCAGCCTGa > 2:391725/9‑100 (MQ=37) gCAAAAAAGGGAAGTGGCAAGCCACTTCCCTTGTACGAGCTAATTATTTTTTGCTTTCTTCTTTCAATACCTTAACGGTATAGCGGCCATCAGCCTGACg > 1:662782/1‑100 (MQ=255) gCAAAAAAGGGAAGTGGCAAGCCACTTCCCTTGTACGAGCTAATTATTTTTTGCTTTCTTCTTTCAATACCTTAACGGTATAGCGGCCATCAGCCTGACg > 2:2701798/1‑100 (MQ=255) cAAAAAAGGGAAGTGGCAAGCCACTTCCCTTGTACGAGCTAATTATTTTTTGCTTTCTTCTTTCAATACCTTAACGGTATAGCGGCCATCAGCCAGatcg > 2:3850897/1‑97 (MQ=255) aaaaaGGGAAGTGGCAAGCCACTTCCCTTGTACGAGCTAATTATTTTTTGCTTTCTTCTTTCAATACCTTAACGGTATAGCGGCCATCAGCCTGACGGTa > 1:295211/1‑100 (MQ=255) naaGGGAAGTGGCTTGCCACTTCCCTTGTACGAGCTAATTATTTTTTGCTTTCTTCTTTCAATACCTTAACGGTATAGCGGCCATCAGCCTGACGGTAt > 2:2949830/2‑99 (MQ=255) caaGGGAAGTGGCTTGCCACTTCCCTTGTACGAGCTAATTATTTTTTGCTTTCTTCTTTCAATACCTTAACGGTATAGCGGCCATCAGCCTGACGGTATg > 2:3572536/2‑100 (MQ=255) aaaGGGAAGTGGCAAGCCACTTCCCTTGTACGAGCTAATTATTTTTTGCTTTCTTCTTTCAATACCTTAACGGTATAGCGGCCATCAGCCTGACGGTATg > 1:3182763/1‑100 (MQ=255) aaaGGGAAGTGGCAAGCCACTTCCCTTGTACGAGCTAATTATTTTTTGCTTTCTTCTTTCAATACCTTAACGGTATAGCGGCCATCAGCCTGACGGTATg < 2:3257582/100‑1 (MQ=255) aaGGGAAGTGGCAAGCCACTTCCCTTGTACGAGCTAATTATTTTTTGCTTTCTTCTTTCAATACCTTAACGGTATAGCGGCCATCAGCCTGACGGTATGc < 1:2287641/100‑1 (MQ=255) gggAAGTGGCTTGCCACTTCCCTTGTACGAGCTAATTATTTTTTGCTTTCTTCTTTCAATACCTTAACGGTATAGCGGCCATCAGCCTGACGGTATGCAc > 1:2229538/1‑100 (MQ=255) ggAAGTGGCTTGCCACTTCCCTTGTACGAGCTAATTATTTTTTGCTTTCTTCTTTCAATACCTTAACGGTATAGCGGCCATCAGCCTGACGGTATGCAcc > 1:3749262/1‑100 (MQ=255) aGTGGCAAGCCACTTCCCTTGTACGAGCGAATTATTTTTGGCTTTCTTCTTTCAATACCTTAACGGTATAGCGGCCATCAGCCTGACGGTATGCACCGTg < 2:3637302/100‑1 (MQ=255) gtgtCAAGCAGCTTCGCTTGTACTATCTAATTATTTTTTGCTTTCTGCTTTCAATACCTGAACGGTATAGCGGCCATCAGCCTGACGGTATGCACCGTg < 2:267355/99‑1 (MQ=255) gTGGCAAGCCACTTCCCTTGTACGAGCTAATTTTTTTTTCCTGTCTTCTTTCAATACCTTAACGGTATAGCGGCCATCAGCCTGACGGTATGCACCGTGa < 2:2904900/100‑1 (MQ=255) gTGGCAAGCCACTTCCCTTGTACGAGCTAATTATTTTTTGCTTTCTTCTTTCAATACCTTAACGGTATAGCGGCCATCAGCCTGACGGTATGCACCGTGa > 1:3552174/1‑100 (MQ=255) tGGCAAGCCACTTCCCTTGTACGAGCTAATTATTTTTTGCTTTCTTCTTTCAATGCCTTAACGGTATAGCGGCCATCAGCCTGACGGTATGCACCGTGaa < 2:1174514/100‑1 (MQ=255) tGGCAAGCCACTTCCCTTGTACGAGCTAATTATTTTTTGCTTTCTTCTTTCAATACCTTAACGGTATAGCGGCCATCAGCCTGACGGTATGCACCGTGaa < 2:2034254/100‑1 (MQ=255) aaGCCACTTCCCTTGTACGAGCTAATTATTTTTTGCTTTCTTCTTTCAATACCTTAACGGTATAGCGGCCATCAGCCTGACGGTATGCACCGTGAATATc < 2:2027916/100‑1 (MQ=255) | AGTACTCCCAGATTTGGATCGCCACGATATAGTATATCGCGCGCGGCTGTGAGGGTGTTTTCATGTGTTCTCCTTATGAGCAAAAAAGGGAAGTGGCAAGCCACTTCCCTTGTACGAGCTAATTATTTTTTGCTTTCTTCTTTCAATACCTTAACGGTATAGCGGCCATCAGCCTGACGGTATGCACCGTGAATATCG > NC_000913/4356348‑4356545 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |