| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 1,188,434 | A→G | 46.1% | V448A (GTA→GCA) | phoQ ← | sensory histidine kinase in two‑component regulatory system with PhoP |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,188,434 | 0 | A | G | 46.1% | 17.5 / 169.4 | 128 | V448A (GTA→GCA) | phoQ | sensory histidine kinase in two‑component regulatory system with PhoP |
| Reads supporting (aligned to +/- strand): ref base A (31/38); new base G (26/33); total (57/71) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 2.90e-01 | |||||||||||
Only 100 of 129 total aligned reads displayed.
ATGCTGGCGACCAAAAATCACCTCCATCCGCGCACCGCCCAGCATGCTCTCTCCGGCGACGATTTTACCCTCATATTGCTCGGTGATTTCGCGGGCTACCGCCAGCCCTACACCTTGCCCAGGGCGTAAAGTATCAACCCGTTGACCACGGTCGAAAATGACCTCTCGCTTGCTTAATGGAATACCGGGGCCATCA > NC_000913/1188337‑1188532 | aTGCTGGCGACCAAAAATCACCTCCATCCGCGCACCGCCCAGCATGCTCTCTCCGGCGACGATTTTACCCTCATATTGCTCGGTGATTTCGCGGGCTAcc > 1:422170/1‑100 (MQ=255) tGCTGGCGACCAAAAATCACCTCCATCCGCGCACCGCCCAGCATGCTATCTCCGGCGACGATTTTACCCTCATATTGCTCGGTGATTTCGCGGGCTGCCg > 1:623063/1‑100 (MQ=255) gCTGGCGACCAAAAATCACCTCCATCCGCGCACCGCCCAGCATGCTCTCTCCGGCGACGATTTTACCCTCATATTGCTCGGTGATTGCGCGGGCTACCGc > 2:2463582/1‑100 (MQ=255) cTGGCGACCAAAAATCACCTCCATCCGCGCACCGCCCAGCATGCTCTCTCCGGCGACGATTTTACCCTCATATTGCTCGGTGATTTCGCGGGCTACCGcc > 1:3272765/1‑100 (MQ=255) tGGCGACCAAACATCGCCTCCATCCGCGCACCGACGAGCATGTTCTCCCCGGCGACGATTTTACCCTCATATTTCTCGGTGATTTCGCACGCTACCGCCa < 2:2013860/100‑1 (MQ=255) gCGACCAAAAATCACCTCCATCCGCGCACCGCCCAGCATGCTCTCTCCGGCGACGATTTTACCCTCATATTGCTCGGTGATTTCGCGGGCTGCCGCCAGc < 2:3644147/100‑1 (MQ=255) gCGACCAAAAATCACCTCCATCCGCGCACCGCCCAGCATGCTCTCTCCGGCGACGATTTTACCCTCATATTGCTCGGTGATTTCGCGGGCTACCGCCAGc > 2:2610149/1‑100 (MQ=255) cGACCAAAAATCACCTCCATCCGCGCACCGCCCAGCATGCTCTCTCCGGCGACGATTTTACCCTCATATTGCTCGGTGATTTCGCGGGCTGCCGCCAGcc > 2:2085636/1‑100 (MQ=255) cGACCAAAAATCACCTCCATCCGCGCACCGCCCAGCATGCTCTCTCCGGCGACGATTTTACCCTCATATTGCTCGGTGATTTCGCGGGCTACCGCCAGcc < 1:2346183/100‑1 (MQ=255) cGACCAAAAATCACCTCCATCCGCGCACCGCCCAGCATGCTCTCTCCGGCGACGATTTTACCCTCATATTGCTCGGTGATTTCGCGGGCTACCGCCAGcc < 1:780430/100‑1 (MQ=255) gACCAAAAATCACCTCCATCCGCGCACCGCCCAGCATGCTCTCTCCGGCGACGATTTTACCCTCATATTGCTCGGTGATTTCGCGGGCTGCCGCCAGccc < 1:3527609/100‑1 (MQ=255) gACCAAAAATCACCTCCATCCGCGCACCGCCCAGCATGCTCTCTCCGGCGACGATTTTACCCTCATATTGCTCGGTGATTTCGCGGGCTGCCGCCAGccc < 2:2224389/100‑1 (MQ=255) aCCAAAAATCACCTCCATCCGCGCACCGCCCAGCATGCTCTCTCCGGCGACGATTTTACCCTCATATTGCTCGGTGATTTCGCGGGCTACCGCCAGCCCt < 1:1887850/100‑1 (MQ=255) ccAAAAATCACCTCCATCCGCGCACCGCCCAGCATGCTCTCTCCGGCGACGATTTTACCCTCATATTGCTCGGTGATTTCGCGGGCTACCGCCAGCCCTa > 2:3252741/1‑100 (MQ=255) ccAAAAATCACCTCCATCCGCGCACCGCCCAGCATGCTCTCTCCGGCGACCATTTTACCCTCCTATTGCCCGGTGATTTCGCGGGCTGCCGCCAGCCCt > 2:1176075/1‑99 (MQ=255) cAAAATTCACCTCCATCCGTGCACCGCCCAGCATGCTCTCTCTGACGCCGGTTTTACCGTCATATTACCCGGTGATTTCGCGAGATACCGCCAGccc > 2:2518260/1‑97 (MQ=255) aaaaaTCACCTCCATCCGCGCACCGCCCAGCATGCTCTCTCCGGCGACGATTTTACCCTCATATTGCTCGGTGATTTCGCGGGCTACCGCCAGCCCTaca < 2:3632714/100‑1 (MQ=255) aaaaaTCACCTCCATCCGCACACCGCCCAGCATGCTCTCTCCGGCGACGATTTTACCCTCATATTGCTCGGTGATTTCGCGGGCTACCGCCAGCCCTaca < 1:833847/100‑1 (MQ=255) aaaaaTCACCTCCATCCGCACACCGCCCAGCATGCTCTCTCCGGCGACGATTTTACCCTCATATTGCTCGGTGATTTCGCGGGCTACCGCCAGCCCTaca < 1:833997/100‑1 (MQ=255) cACCTCCATCCGCGCACCGCCCAGCATGCTCTCTCCGGCGACGATTTTACCCTCATATTGCTCGGTGATTTCGCGGGCTGCCGCCAGCCCTACACCTTGc < 1:2416477/100‑1 (MQ=255) aCCTCCATCCGCGCACCGCCCAGCATGCTCTCTCCGGCGACGATTTTACCCTCATATTGCTCGGTGATTTCGCGGGCTACCGCCAGCCCTACACCTTGcc > 1:453068/1‑100 (MQ=255) tCCATCCGCGCACCGCCCAGCATGCTCTCTCCGGCGACGATTTTACCCTCATATTGCTCGGTGATTTCGCGGGCTGCCGCCAGCCCTACACCTTGCCCAg > 1:1677900/1‑100 (MQ=255) cATCCGCGCACCGCCCAGCATGCTCTCTCCGGCGACGATTTTACCCTCATATTGCTCGGTGGTTTCTCGGGCTGCCGCCAGCCCTACACCTTGCCCTggg > 1:2665750/1‑100 (MQ=255) cATCCGCGCACCGCCCAGCATGCTCTCTCCGGCGACGATTTTACCCTCATATTGCTCGGTGATTTCGCGGGCTACCGCCAGCCCTACACCTTGCCCAggg > 2:1252430/1‑100 (MQ=255) aTCCGCGCACCGCCCAGCATGCTCTCTCCGGCGACGATTTTACCCTCATATTGCTCGGTGATTTCGCGGGCTGCCGCCAGCCCTACACCTTGCCCAGGGc < 2:475329/100‑1 (MQ=255) tCCGCGCACCGCCCAGCATGCTCTCTCCGGCGACGATTTTACCCTCATATTGCTCGGTGATTTCGCGGGCTGCCGCCAGCCCTACACCTTGCCCAGGGCg < 2:5468/100‑1 (MQ=255) tCCGCGCACCGCCCAGCATGCTCTCTCCGGCGACGATTTTACCCTCATATTGCTCGGTGATTTCGCGGGCTACCGCCAGCCCTACACCTTGCCCAGGGCg < 2:3330765/100‑1 (MQ=255) tCCGCGCACCGCCCAGCATGCTCTCTCCGGCGACGATTTTACCCTCATATTGCTCGGTGATTTCGCGGGCTACCGCCAGCCCTACACCTTGCCCAGGGCg < 2:1546900/100‑1 (MQ=255) ccGCGCACCGCCCAGCATGCTCTCTCCGGCGACGATTTTACCCTCATATTGCTCGGTGATTTCGCGGGCTACCGCCAGCCCTACACCTTGCCCAGGGCGt > 2:3598461/1‑100 (MQ=255) ccGCGCACCGCCCAGCATGCTCTCTCCGGCGACGATTTTACCCTCATATTGCTCGGTGATTTCGCGGGCTACCGCCAGCCCTACACCTTGCCCAGGGCGt > 1:2318020/1‑100 (MQ=255) cgcgCACCGCCCAGCATGCTCTCTCCGGCGACGATTTTACCCTCATATTGCTCGGTGATTTCGCGGGCTGCCGCCAGCCCTACACCTTGCCCAGGGCGTa > 2:4010821/1‑100 (MQ=255) cgcgCACCGCCCAGCATGCTCTCTCCGGCGACGATTTTACCCTCATATTGCTCGGTGATTTCGCGGGCTGCCGCCAGCCCTACACCTTGCCCAGGGCGTa < 2:1265089/100‑1 (MQ=255) cgcgCACCGCCCAGCATGCTCTCTCCGGCAACGATTTTACCCTCATATTGCTCGGTGCTTTCGCGGGCTACCGCCAGCCCTAAACCTTGCCCCGGGCGt > 2:2909998/1‑99 (MQ=255) cgcgCACCGCCCAGCATGCGCTCTCCGGCGACGGTTTTACCCTCATTTTGCTCGGTGATTTCGCGGGCTGCCGCCAGCCCTACACCTTGCCCAGGGCg < 2:3307179/98‑1 (MQ=255) cgcACCGCCCAGCATGCTCTCTCCGGCGACGATTTTACCCTCATATTGCTCGGTGATTTCGCGGGCTACCGCCAGCCCTACACCTTGCCCAGGGCGTaaa < 1:3076272/100‑1 (MQ=255) ccGCCCAGCATGCTCTCTCCGGCGACGATTTTACCCTCATATTGCTCGGTGATTTCGCGGGCTGCCGCCAGCCCTACACCTTGCCCAGGGCGTAAAGTAt < 2:3010170/100‑1 (MQ=255) ccGCCCAGCATGCTCTCTCCGGCGACGATTTTACCCTCATATTGCTCGGTGATTTCGCGGGCTGCCGCCAGCCCTACACCTTGCCCAGGGCGTAAAGTAt > 1:1541534/1‑100 (MQ=255) cGCCCAGCATGCTCTCTCCGGCGACGATTTTACCCTCATATTGCTCGGTGATTTCGCGGGCTGCCGCCAGCCCTACACCTTGCCCAGGGCGTAAAGTATc > 1:614991/1‑100 (MQ=255) cGCCCAGCATGCTCTCTCCGGCGACGATTTTACCCTCATATTGCTCGGTGATTTCGCGGGCTACCGCCAGCCCTACACCTTGCCCAGGGCGTAAAGTATc < 1:3961456/100‑1 (MQ=255) cGCCCAGCATGCTCTCTCCGGCGACGATTTTACCCTCATATTGCTCGGTGATTTCGCGGGCTACCGCCAGCCCTACACCTTGCCCAGGGCGTAAAGTATc < 1:670299/100‑1 (MQ=255) gCCCAGCATGCTCTCTCCGGCGACGATTTTACCCTCATATTGCTCGGTGATTTCGCGGGCTGCCGCCAGCCCTACACCTTGCCCAGGGCGTAAAGTATCa > 1:2329210/1‑100 (MQ=255) cctaacATGCTCTCTCCGGCGACGATTTTACCATCATATTGCTCGGTTATTTCGCGGGCTACCGCCAGCCCTCCACCTTGCCCAGGGCGTAAAGTCTCa > 2:2417728/6‑99 (MQ=255) cccAGCATGCTCTCTCCGGCGACGATTTTACCCTCATATTGCTCGGTGATTTCGCGGGCTGCCGCCAGCCCTACACCTTGCCCAGGGCGTAAAGTATCaa < 1:154354/100‑1 (MQ=255) cAGCATGCTCTCTCCGGCGACGATTTTACCCTCATATTGCTCGGTGATTTCGCGGGCTGCCGCCAGCCCTACACCTTGCCCAGGGCGTAAAGTATCAAcc < 2:2919725/100‑1 (MQ=255) gCATGCTCTCTCCGGCGACGATTTTACCCTCATATTGCTCGGTGATTTCGCGGGCTGCCGCCAGCCCTACACCTTGCCCAGGGCGTAAAGTATCAACCCg > 1:2036609/1‑100 (MQ=255) gCTCTCTCCGGCGACGATTTTACCCTCATATTGCTCGGTGATTTCGCGGGCTGCCGCCAGCCCTACACCTTGCCCAGGGCGTAAAGTATCAACCCGtt > 2:663719/1‑98 (MQ=255) gCTCTCTCCGGCGACGATTTTACCCTCATATTGCTCGGTGATTTCGCGGGCTACCGCCAGCCCTACACCTTGCCCAGGGCGTAAAGTATCAACCCGTTg < 1:2463596/99‑1 (MQ=255) ctctctCCGGCGACGATTTTACCCTCATATTGCTCGGTGATTTCGCGGGCTGCCGCCAGCCCTACACCTTGCCCAGGGCGTAAAGTATCAACCCGTTGAc < 1:3267130/100‑1 (MQ=255) ctctctCCGGCGACGATTTTACCCTCATATTGCTCGGTGATTTCGCGGGCTGCCGCCAGCCCTACACCTTGCCCAGGGCGTAAAGTATCAACCCGTTGAc > 1:2625241/1‑100 (MQ=255) tctctcCGGCGACGATTTTACCCTCATATTGCTCGGTGATTTCGCGGGCTGACGCCAGCCCTACACCTTGCCCAGGGCGTAAAGTATCAACCCGTTGAcc < 2:2861736/100‑1 (MQ=255) ctctcCGGCGACGATTTTACCCTCATATTACTCGGTGATTTCGCGGGCTGCCGCCAGCCCTACACCTTGCCCAGGGCGTAAAGTATCAACCCGTTGACCa < 1:1340754/100‑1 (MQ=255) nctcCGGCGACGATTTTACCCTCATATTGCTCGGTGATTTCGCGGGCTGCCGCCAGCCCTACACCTTGCCCAGGGCGTAAAGTATCAACCCGTTGACCAc > 1:2057357/2‑100 (MQ=255) ccGGCGACGATTTTACCCTCATATTGCTCGGTGATTTCGCGGGCTACCGCCAGCCCTACACCTTGCCCAGGGCGTAAAGTATCAACCCGTTGACCACGGt > 1:2125901/1‑100 (MQ=255) ggCGACGATTTTACCCTCATATTGCTCGGTGATTTCGCGGGCTGCCGCCAGCCCTACACCTTGCCCAGGGCGTAAAGTATCAACCCGTTGACCACGGTCg > 1:1353537/1‑100 (MQ=255) ggCGACGATTTTACCCTCATATTGCTCGGTGATTTCGCGGGCTACCGCCAGCCCTACACCTTGCCCAGGGCGTAAAGTATCAACCCGTTGACCACGGTCg > 2:850567/1‑100 (MQ=255) ggCGACGATTTTACCCTCATATTGCTCGGTGATTTCGCGGGCTACCGCCAGCCCTACACCTTGCCCAGGGCGTAAAGTATCAACCCGTTGACCACGGTCg < 1:1085665/100‑1 (MQ=255) gCGACGATTTTACCCTCATATTGCTCGGTGATTTCGCGGGCTACCGCCAGCCCTACACCTTGCCCAGGGCGTAAAGTATCAACCCGTTGACCACGGTCGa < 2:1850637/100‑1 (MQ=255) cgaTTTTACCCTCATATTGCTCGGTGATTTCGCGGGCTACCGCCAGCCCTACACCTTGCCCAGGGCGTAAAGTATCAACCCGTTGACCACGGTCGAAAAt < 1:1905372/100‑1 (MQ=255) gaTTTTACCCTCATATTGCTCGGTGATTTCGCGGGCTGCCGCCAGCCCTACACCTTGCCCAGGGCGTAAAGTATCAACCCGTTGACCACGGTCGAAAATg < 2:812987/100‑1 (MQ=255) gaTTTTACCCTCATATTGCTCGGTGATTTCGCGGGCTACCGCCAGCCCTACACCTTGCCCAGGGCGTAAAGTATCAACCCGTTGACCACGGTCGAAAATg < 2:3362748/100‑1 (MQ=255) ttttACCCTCATATTGCTCGGTGATTTCGCGGGCTGCCGCCAGCCCTACACCTTGCCCAGGGCGTAAAGTATCAACCCGTTGACCACGGTCGAAAATGAc < 1:344362/100‑1 (MQ=255) tttACCCTCATATTGCTCGGTGATTTCGCGGGCTACCGCCAGCCCTACACCTTGCCCAGGGCGTAAAGTATCAACCCGTTGACCACGGTCGAAAATGAcc < 2:3871628/100‑1 (MQ=255) tttACCCTCATATTGCTCGGTGATTTCGCGGGCTACCGCCAGCCCTACACCTTGCCCAGGGCGTAAAGTATCAACCCATTGACCACGGTCGAAAATGAcc < 2:1021472/100‑1 (MQ=255) tACCCTCATATTGCTCGGTGATTTCGCGGGCTGCCGCCAGCCCTACACCTTGCCCAGGGCGTAAAGTATCAACCCGTTGACCACGGTCGAAAATGACct > 2:1606882/1‑99 (MQ=255) cccTCATATTGCTCGGTGATTTCGCGGGCTACCGCCCGCCCTACACCTTGCCCAGGGCGTAAAGTATCAACCCGTTGACCACGGTCGAAAATGACCtctc > 2:2875256/1‑100 (MQ=255) cTCATTTTGCTCGGTGATTTCGCGGGCTGCCGCCAGCCCTACACCGTGCCCAGGGCGTAAAGTATCAACCCGTTGACCACGGTCGAAAATGACCTCTCgc < 2:4096830/100‑1 (MQ=255) cTCATATTGCTCGGTGATTTCGCGGGCTGCCGCCAGCCCTACACCTTGCCCAGGGCGTAAAGTATCAACCCGTTGACCACGGTCGAAAATGACCTCTCgc > 1:1223983/1‑100 (MQ=255) cTCATATTGCTCGGTGATTTCGCGGGCTGCCGCCAGCCCTACACCTTGCCCAGGGCGTAAAGTATCAACCCGTTGACCACGGTCGAAAATGACCTCTCgc > 1:3195470/1‑100 (MQ=255) cTCATATTGCTCGGTGATTTCGCGGGCTACCGCCAGCCCTACACCTTGCCCAGGGCGTAAAGTATCAACCCGTTGACCACGGTCGAAAATGACCTCTCgc > 1:242172/1‑100 (MQ=255) tCATATTGCTCGGTGATTTCGCGGGCTACCGCCAGCCCTACACCTTGCCCAGGGCGTAAAGTATCAACCCGTTGACCACGGTCGAAAATGACCTCTCgct > 1:147892/1‑100 (MQ=255) cATATTGCTCGGTGATTTCGCGGGGTGCCGCCAGCCCTACACCTTGCCCAGGGCGTAACGTATCAACCCGTTGACCACGGTCGAAAATGACCTCTCgctt < 2:227115/100‑1 (MQ=255) cATATTGCTCGGTGATTTCGCGGGCTACCGCCAGCCCTACACCTTGCCCAGGGCGTAAAGTATCAACCCGTTGACCACGGTCGAAAATGACCTCTCgctt < 1:1252438/100‑1 (MQ=255) atatTGCTCGGTGATTTCGCGGGCTGCCGCCAGCCCTACACCTTGCCCAGGGCGTAAAGTATCAACCCGTTGACCAGGGTCGAAAATGACCTCTCgcttg < 1:3500691/100‑1 (MQ=255) tatTGCTCGGTGATTTCGCGGGCTGCCGCCAGCCCTACACCTTGCCCAGGGCGTAAAGTATCAACCCGTTGACCACGGTCGAAAATGACCTCTCgcttgc > 1:3843921/1‑100 (MQ=255) tatTGCTCGGTGATTTCGCGGGCTGCCGCCAGCCCTACACCTTGCCCAGGGCGTAAAGTATCAACCCGTTGACCACGGTCGAAAATGACCTCTCgcttgc > 2:2946030/1‑100 (MQ=255) tatTGCTCGGTGATTTCGCGGGCTGCCGCCAGCCCTACACCTTGCCCAGGGCGTAAAGTATCAACCCGTTGACCACGGTCGAAAATGACCTCTCgcttgc > 2:2760283/1‑100 (MQ=255) tatTGCTCGGTGATTTCGCGGGCTACCGCCAGCCCTACACCTTGCCCAGGGCGTAAAGTATCAACCCGTTGACCACGGTCGAAAATGACCTCTCgcttgc > 2:2993220/1‑100 (MQ=255) atTGCTCGGTGATTTCGCGGGCTGCCGCCAGCCCTACACCTTGCCCAGGGCGTAAAGTATCAACCCGTTGACCACGGTCGAAAATGACCTCTCgcttgct < 1:1366476/100‑1 (MQ=255) atTGCTCGGTGATTTCGCGGGCTGCCGCCAGCCCTACACCTTGCCCAGGGCGTAAAGTATCAACCCGTTGACCACGGTCGAAAATGACCTCTCgcttgct > 2:294281/1‑100 (MQ=255) ttGCTCGGTGATTTCGCGGGCTGCCGCCAGCCCTACACCTTGCCCAGGGCGTAAAGTATCAACCCGTTGACCACGGTCGAAAATGACCTCTCgcttgctt < 1:3283897/100‑1 (MQ=255) ttGCTCGGTGATTTCGCGGGCTACCGCCAGCCCTACACCTTGCCCAGGGCGTAAAGTATCAACCCGTTGACCACGGTCGAAAATGACCTCTCgcttgctt < 1:2610165/100‑1 (MQ=255) tGCTCGGTGATTTCGCGGGCTGCCGCCAGCCCTACACCTTGCCCAGGGCGTAAAGTATCAACCCGTTGACCACGGTCGAAAATGACCTCTCGCTTGCTTa > 1:3998680/1‑100 (MQ=255) gCTCGGTGATTTCGCGGGCTGCCGCCAGCCCTACACCTTGCCCAGGGCGTAAAGTATCAACCCGTTGACCACGGTCGAAAATGACCTCTCGCTTGCTTaa > 2:4071662/1‑100 (MQ=255) gCTCGGTGATTTCGCGGGCTACCGCCAGCCCTACACCTTGCCCAGGGCGTAAAGTATCAACCCGTTGACCACGGTCGAAAATGACCTCTCGCTTGCTTaa > 1:3072926/1‑100 (MQ=255) cTCGGTGATTTCGCGGGCTACCGCCAGCCCTACACCTTGCCCAGGGCGTAAAGTATCAACCCGTTGACCACGGTCGAAAATGACCTCTCGCTTGCTTaa > 2:1006077/1‑99 (MQ=255) cTCGGTGATTTCGCGGGCTACCGCCAGCCCTACACCTTGCCCAGGGCGTAAAGTATCAACCCGTTGACCACGGTCGAAAATGACCTCTCGCTTGCTTAAt > 1:718822/1‑100 (MQ=255) tCGGTGATTTCGCGGGCTGCCGCCAGCCCTACACCTTGCCCAGGGCGTAAAGTATCAACCCGTTGACCACGGTCGAAAATGACCTCTCGCTTGCTTAATg < 1:2085649/100‑1 (MQ=255) tCGGTGATTTCGCGGGCTACCGCCAGCCCTACACCTTGCCCAGGGCGTAAAGTATCAACCCGTTGACCACGGTCGAAAATGACCTCTCGCTTGCTTAATg < 1:3228283/100‑1 (MQ=255) cGGTGATTTCGCGGGCTGCCGCCAGCCCTACACCTTGCCCAGGGCGTAAAGTATCAACCCGTTGACCACGGTCGAAAATGACCTCTCGCTTGCTTAATgg > 1:1927846/1‑100 (MQ=255) cGGTGATTTCGCGGGCTGCCGCCAGCCCTACACCTTGCCCAGGGCGTAAAGTATCAACCCGTTGACCACGGTCGAAAATGACCTCTCGCTTGCTTAATgg < 2:614985/100‑1 (MQ=255) cGGTGATTTCGCGGGCTGCCGCCAGCCCTACACCTTGCCCAGGGCGTAAAGTATCAACCCGTTGACCACGGTCGAAAATGACCTCTCGCTTGCTTAATgg < 1:1233709/100‑1 (MQ=255) cGGTGATTTCGCGGGCTACCGCCAGCCCTACACCTTGCCCAGGGCGTAAAGTATCAACCCGTTGACCACGGTCGAAAATGACCTCTCGCTTGCTTAATgg > 1:955324/1‑100 (MQ=255) gTGATTTCGCGGGCTACCACCAGCCCTACACCTTGCCCAGGGCGTAAAGTATCAACCCGTTGACAACGGTCGAAAATGACATCTCGCTTGCTTAATGGaa > 2:1996980/1‑100 (MQ=255) gATTTCGCGGGCTACCGCCAGCCCTACACCTTGCCCAGGGCGTAAAGTATCAACCCGTTGACCACGGTCGAAAATGACCTCTCGCTTGCTTAATGGAATa > 2:1333804/1‑100 (MQ=255) tCGCGGGCTACCGCCAGCCCTACACCTTGCCCAGGGCGTAAAGTATCAACCCGTTGACCACGGTCGAAAATGACCTCTCGCTTGCTTAATGGAATACCgg < 1:2256380/100‑1 (MQ=255) gcgGGCTGCCGCCAGCCCTGCACCTGGCCCAGGGCGTAAAGTATCAACCCGTTGACCACGGTCGAGGATGACCGCTCGCTTGCTTAATTGAATACCgggg < 2:231318/100‑1 (MQ=255) gcgGGCTGCCGCCAGCCCTACACCTTGCCCAGGGCGTAAAGTATCAACCCGTTGACCACGGTCGAAAATGACCTCTCGCTTGCTTAATGGAATACCgggg < 1:540187/100‑1 (MQ=255) cgGGCTACCGCCAGCCCTACACCTTGCCCAGGGCGTAAAGTATCAACCCGTTGACCACGGTCGAAAATGACCTCTCGCTTGCTTAATGGAATACCGGGGc < 1:3770358/100‑1 (MQ=255) ggCTGCCGCCAGCCCTACACCTTGCCCAGGGCGTAAAGTATCAACGCGTTGACCACGGCCGAAAATGACCTCTCGCTTGCTTAATGGAATACCGGGGCca > 2:1031522/1‑100 (MQ=255) tACCTCCAGCCCTACACCTTGCCCAGGGCGTAAAGTATCAACCCGTTGACCACGGTCGAAAATGACCTCTCGCTTGCTTAATGGAATACCGGGGCcatca < 2:3309409/100‑1 (MQ=255) | ATGCTGGCGACCAAAAATCACCTCCATCCGCGCACCGCCCAGCATGCTCTCTCCGGCGACGATTTTACCCTCATATTGCTCGGTGATTTCGCGGGCTACCGCCAGCCCTACACCTTGCCCAGGGCGTAAAGTATCAACCCGTTGACCACGGTCGAAAATGACCTCTCGCTTGCTTAATGGAATACCGGGGCCATCA > NC_000913/1188337‑1188532 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |