| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 1,197,340 | T→C | 23.3% | T65A (ACT→GCT) | ymfD ← | e14 prophage; putative SAM‑dependent methyltransferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,197,340 | 0 | T | C | 23.3% | 225.2 / 69.3 | 128 | T65A (ACT→GCT) | ymfD | e14 prophage; putative SAM‑dependent methyltransferase |
| Reads supporting (aligned to +/- strand): ref base T (48/50); new base C (18/12); total (66/62) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.06e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.73e-01 | |||||||||||
Only 100 of 128 total aligned reads displayed.
TGCATTTTTATAATATCGTGGGACATAGTCAATAATTTTAGTTTTAATTCCTCTAATAATTTGCTCTCTTTCAAGTTGCCTTTTCGAGTCTAGAAAAGTAACTTCATCAAATTTACTGATTAATTCATCAGAATATCTAAGTTTTCCGCAGCCAAAATCAAGGGCGTGGCCATTTTTCTCAATGCTTCTAATATACT > NC_000913/1197242‑1197438 | tGCATTTTTATAATATCGTGGGACATAGTCAATAATTTTAGTTTTAATTCCTCTAATAATTTGCTCTCTTTCAAGTTGCCTTTTCGAGTCTAGAAAAGTa < 1:566972/100‑1 (MQ=255)tGCATTTTTATAATATCGTGGGACATAGTCAATAATTTTAGTTTTAATTCCTCTAATAATTTGATCTCTTTCAAGTTGCCTTTTCGAGTCTAGAAAAGTa > 2:2072583/1‑100 (MQ=255) gCATTTTTATAATATCGTGGGACATAGTCAATAATTTTAGTTTTAATTCCTCTAATAATTTGCTCTCTTTCAAGTTGCCTTTTCGAGTCTAGAAAAGTaa < 1:3895008/100‑1 (MQ=255) gCATTTTTATAATATCGTGGGACATAGTCAATAATTTTAGTTTTAATTCCTCTAATAATTTGCTCTCTTTCAAGTTGCCTTTTCGAGTCTAGAAAAGTaa < 1:3894228/100‑1 (MQ=255) gCATTTTTATAATATCGTGGGACATAGTCAATAATTTTAGTTTTAATTCCTCTAATAATTTGCTCTCTTTCAAGTTGCCTTTTCGAGTCTAGAAAAGTaa < 1:1808456/100‑1 (MQ=255) cATTTTTATAATATCGTGGGACATAGTCAATAATTTTAGTTTTAATTCCTCTAATAATTTGCTCTCTTTCAAGTTGCCTTTTCGAGTCTAGAAAAGTAAc > 1:4117753/1‑100 (MQ=255) aTTTTTATAATATCGTGGGACATAGTCAATAATTTTAGTTTTAATTCCTCTAATAATTTGCTCTCTTTCAAGTTGCCTTTTCGAGTCTAGAAAAGTAAc < 2:1186116/99‑1 (MQ=255) tttATAATATCGTGGGACATAGTCAATAATTTTAGTTTTAATTCCTCTAATAATTTGCTCTCTTTCAAGTTGCCTTTTCGAGTCTAGAAAAGTAACTtca < 1:2672500/100‑1 (MQ=255) tttATAATATCGTGGGACATAGTCAATAATTTTAGTTTTAATTCCTCTAATAATTTGCTCTCTTTCAAGTTGCCTTTTCGAGTCTAGAAAAGCAACTtca < 2:161582/100‑1 (MQ=255) ttATAATATCGTGGGACATAGTCAATAATTTTAGTTTTAATTCCTCTAATAATTTGCTCTCTTTCAAGTTGCCTTTTCGAGTCTAGAAAAGTAACTtcat > 2:3370180/1‑100 (MQ=255) ataataTCGTGGGACATAGTCAATAATTTTAGTTTTAATTCCTCTAATAATTTGCTCTCTTTCAAGTTGCCTTTTCGAGTCTAGAAAAGTAACTtcatca < 2:1886648/100‑1 (MQ=255) ataataTCGTGGGACATAGTCAATAATTTTAGTTTTAATTCCTCTAATAATTTGCTCTCTTTCAAGTTGCCTTTTCGAGTCTAGAAAAGTAACTtcatca < 2:2959451/100‑1 (MQ=255) atatCGTGGGACATAGTCAATAATTTTAGTTTTAATTCCTCTAATAATTTGCTCTCTTTCAAGTTGCCTTTTCGAGTCTAGAAAAGTAACTTCATCAAAt > 2:2282270/1‑100 (MQ=255) atatCGTGGGACATAGTCAATAATTTTAGTTTTAATTCCTCTAATAATTTGCTCTCTTTCAAGTTGCCTTTTCGAGTCTAGAAAAGTAACTTCATCAAAt < 2:1440464/100‑1 (MQ=255) atatCGTGGGACATAGTCAATAATTTTAGTTTTAATTCCTCTAATAATTTGCTCTCTTTCAAGTTGCCTTTTCGAGTCTAGAAAAGCAACTTCATCAAAt > 1:235685/1‑100 (MQ=255) cGTGGGACATAGTCAATAATTTTAGTTTTAATTCCTCTAATAATTTGCTCTCTTTCAAGTTGCCTTTTCGAGTCTAGAAAAGCAACTTCATCAAATTTAc > 2:711118/1‑100 (MQ=255) cGTGGGACATAGTCAATAATTTTAGTTTTAATTCCTCTAATAATTTGCTCTCTTTCAAGTTGCCTTTTAGAGTCTAGAAAAGTAACTTCATCAAATTTAc > 1:3612566/1‑100 (MQ=255) gTGGGACATAGTCAATAATTTTAGTTTTAATTCCTCTAATAATTTGCTCTCTTTCAAGTTGCCTTTTCGAGTCTAGAAAAGTAACTTCATCAAATTTACt < 1:3027702/100‑1 (MQ=255) gTGGGACATAGTCAATAATTTTAGTTTTAATTCCTCTAATAATTGGCTCTCTTTCAAGTTGCCTTTTCGAGTCTAGAAAAGTAACTTCATCAAATTTACt < 1:1302428/100‑1 (MQ=255) tgtgACATATTCAATAATTTTAGTTTTAATTCCTCTAATAATTTGCTCTCTTTCAAGTTGTCTTTTCGAGTCTAGAAAAGCAACTTCATCAAATTTAc < 2:1849797/95‑1 (MQ=255) tGGGACATAGTCAATAATTTTAGTTTTAATTCCTCTAATAATTTGCTCTCTTTCAAGTTGCCTTTTCGAGTCTAGAAAAGTAACTTCATCAAATTTACTg < 1:1902463/100‑1 (MQ=255) tGGGACATAGTCAATAATTTTAGTTTTAATTCCTCTAATAATTTGCTCTCTTTCAAGTTGCCTTTTCGAGTCTAGAAAAGTAACTTCATCAAATTTACTg > 1:66814/1‑100 (MQ=255) aCATAGTCAATAATTTTAGTTTTAATTCCTCTAATAATTTGCTCTCTTTCAAGTTGCCTTTTCGAGTCTAGAAAAGTAACTTCATCAAATTTACTGAtt < 2:666816/99‑1 (MQ=255) aCATAGTCAATAATTTTAGTTTTAATTCCTCTAATAATTTGCTCTCTTTCAAGTTGCCTTTTCGAGTCTAGAAAAGCAACTTCATCAAATTTACTGATTa < 1:1949544/100‑1 (MQ=255) cATAGTCAATAATTTTAGTTTTAATTCCTCTAATAATTTGCTCTCTTTCAAGTTGCCTTTTCGAGTCTAGAAAAGCAACTTCATCAAATTTACTGATTaa < 1:2538529/100‑1 (MQ=255) aTAGTGAATAATTTTAGTTTTTATTCCTCGATGAATTTGCGCTCTCTCAAGTTTCCTTTTCGAGTCTAGGAAAGTAACTTCATCAAATTTCCTGATTAAt < 2:731869/100‑1 (MQ=255) aGTCCATAATTTTAGTTTTAATTCCTCTAATAATTTGCTATCTTTCAAGTTGCCTTTTCGAGTCTAGAAAAGTAACTTCATCAAATTTACTGATTAATtc < 1:1796688/100‑1 (MQ=255) aGTCAATAATTTTAGTTTTAATTCCTCTAATAATTTGCTCTCTTTCAAGTTGCCTTTTCGAGTCTAGAAAAGTAACTTCATCAAATTTACTGATTAATtc > 2:1796675/1‑100 (MQ=255) aGTCAATAATTTTAGTTTTAATTCCTCAGATAATTTGCCCTCTTTCAAGTTACCTTTTCGAGACTTGACACTTAACTTCATGAAATTTGCTGCTTAAt > 2:2051576/1‑98 (MQ=255) gTCAATAATTTTAGTTTTAATTCCTCTAATAATTTGCTCTCTTTCAATTTGCCTTTTCGAGTCTAGAAAAGCAACTTCATCAAATTTACTGATTAATtca > 2:70462/1‑100 (MQ=255) gTCAATAATTTTAGTTTTAATTCCTCTAATAATTTGCTCTCTTTCAAGTTGCCTTTTCGAGTCTAGAAAAGTAAGTTAATCAAATTTACTGATTAATtca > 2:1091952/1‑100 (MQ=255) gTCAATAATTTTAGTTTTAATTCCTCTAATAATTTGCTCTCTTTCAAGTTGCCTTTTCGAGTCTAGAAAAGTAACTTCATCAAATTTACTGATTAATtca < 1:3644986/100‑1 (MQ=255) tCAATAATTTTAGTTTTAATTCCTCTAATAATTTGCTCTCTTTCAAGTTGCCTTTTCGAGTCTAGAAAAGTAACTTCATCAAATTTACTGATTAATtcat < 1:1420027/100‑1 (MQ=255) cAATAATTTTAGTTTTAATTCCTCTAATAATTTGCTCTCTTTCAAGTTGCCTTTTCGAGTCTAGAAAAGTAACTTCATCAAATTTACTGATTAATtcat > 2:280257/1‑99 (MQ=255) cAATAATTTTAGTTTTAATTCCTCTAATAATTTGCTCTCTTTCAAGTTGCCTTTTCGAGTCTAGAAAAGCAACTTCATCAAATTTACTGATTAATtcatc > 1:3415750/1‑100 (MQ=255) cAATAATTTTAGTTTTAATTCCTCTAATAATTTGCTCTCTTTCAAGTTGCCTTTTCGAGTCTAGAAAAGCAACTTCATCAAATTTACTGATTAATtcat < 1:4116112/99‑1 (MQ=255) cAATAATTTTAGTTTTAATTCCTCTAATAATTTGCTCTCTTTCAAGTTGCCTTTTCGAGTATAGAAATGTAACTTCATCAAATTTACTGATTAATtca > 2:3880008/1‑98 (MQ=255) aataatTTTAGTTTTAATTCCTCTAATAATTTGCTCTCTTTCAAGTTGCCTTTTCGAGTCTAGAAAAGTAACTTCATCAAATTTACTGATTAATtcatca > 1:1473745/1‑100 (MQ=255) ataatTTTAGTTTTAATTCCTCTAATAATTTGCTCTCTTTCAATTTGCCTTTTCGAGTCTATAAAAGTAACTTCATCAAATTTACTGATTAATTCATCAg > 2:876653/1‑100 (MQ=255) ataatTTTAGTTTTAATTCCTCTAATAATTTGCTCTCTTTCAAGTTGCCTTTTCGAGTCTAGAAAAGTAACTTCATCAAATTTACTGATTAATtcatc < 2:1906894/98‑1 (MQ=255) ataatTTTAGTTTTAATTCCTCTAATAATTTGCTCTCTTTCAAGTTGCCTTTTCGAGTCTAGAAAAGTAACTTCATCAAATTTACTGATTAATTCATCAg < 2:3260900/100‑1 (MQ=255) ttAGTTTTAATTCCTCTAATAATTTGCTCTCTTTCAAGTTGCCTTTTCGAGTCTAGAAAAGCAACTTCATCAAATTTACTGATTAATTCATCAGAATATc < 2:2693686/100‑1 (MQ=255) tAGTTTTAATTCCTCTAATAATTTGCTCTCTTTCAAGTTGCCTTTTCGAGTCTAGAAAAGTAACTTCATCAAATTTACTGATTAATTCATCAGAATATCt > 1:1436410/1‑100 (MQ=255) ttttAATTCCTCTAATAATTTGCTCTCTTTCAAGTTGCCTTTTCGAGTCTAGAAAAGTAACTTCATCAAATTTACTGATTAATTCATCAGAATATCTAAg < 1:2467441/100‑1 (MQ=255) tCCTCTAATAATTTGCTCTCTTTCAAGTTGCCTTTTCGAGTCTAGAAAAGTAACTTCATCAAATTTACTGATTAATTCATCAGAATATCTAAGTTTTCCg < 1:961450/100‑1 (MQ=255) ctctAATAATTTGCTCTCTTTCAAGTTGCCTTTTCTAGTATAGAAAAGTAACTTCATCAAATTTACTGATTAATTCATAAGAATATCTAAGATTTCTGCa > 2:1839072/1‑100 (MQ=255) ctctAATAATTTGCTCTCTTTCAAGTTGCCTTTTCGAGTCTTGAAAACTAACTTCATCAAATTTACTGATTAATTCATCAGAATATCTAAGTTTTcc < 1:1344971/97‑1 (MQ=255) ctctAATAATTGGCTCTCTATCAAGTTGCCTTTTCGAAGATAGAAAAGTAACTTCATTAAATTTACTTGGTAAGTTATGGGAATATCTAAGTTTTTCgta > 2:2547051/1‑98 (MQ=255) ctAATAATTTGCTCTCTTTCAAGTTGCCTTTTCGAGTCTAGAAAAGTAACTTCATCAAATTTACTGATTAATTCATCAGAATATCTAAGTTTTCCGCAGc > 2:3777543/1‑100 (MQ=255) ctAATAATTTGCTCTCTTTCAAGTTGCCTTTTCGAGTCTAGAAAAGCAACTTCATCAAATTTACTGATTAATTCATCAGAATATCTAAGTTTTCCGCAg < 1:3895487/99‑1 (MQ=255) taataaTTTGCTCTCTTTCAAGTTGCCTTTTCGAGTCTAGAAAAGTAACTTCATCAAATTTACTGATTAATTCATCAGAATATCTAAGTTTTCCGCAGcc < 1:494161/100‑1 (MQ=255) taataaTTTGCTCTCTTTCAAGTTGCCTTTTCGAGTCTAGAAAAGTAACTTCATCAAATTTACTGATTAATTCATCAGAATATCTAAGTTTTCCGCAGcc > 1:2415114/1‑100 (MQ=255) aataatTTGCTCTCTTTCAAGTTGCCTTTTCGAGTCTAGAAAAGTAACTTCATCAAATTTACTGATTAATTCATCAGAATATCTAAGTTTTCCGCAGCCa > 2:2827876/1‑100 (MQ=255) taatTTGCTCTCTTTCAAGTTGCCTTTTCGAGTCTAGAAAAGCAACTTCATCAAATTTACTGATTAATTCATCAGAATATCTAAGTTTTCCGCAGCCaaa > 2:3338369/1‑100 (MQ=255) aatTTGCTCTCTTTCAAGTTGCCTTTTCGAGTCTAGAAAAGTAACTTCATCAAATTTACTGATTAATTCATCAGAATATCTAAGTTTTCCGCAGCCaaaa > 1:2713550/1‑100 (MQ=255) aatTTGCTCTCTTTCAAGTTGCCTTTTCGAGTCTAGAAAAGTAACTTCATCAAATTTACTGATTAATTCATCAGAATATCTAAGTTTTCCGCAGCCaaaa < 1:785288/100‑1 (MQ=255) atTTGCTCTCTTTCAAGTTGCCTTTTCGAGTCTAGAAAAGTAACTTCATCAAATTTACTGATTAATTCATCAGAATATCTAAGTTTTCCGCAGCCAAAAt < 1:2846390/100‑1 (MQ=255) ttGCTCTCTTTCAAGTTGCCTTTTCGAGTCTAGAAAAGTAACTTCATCAAATTTACTGATTAATTCATCAGAATATCTAAGTTTTCCGCAGCCAAAATCa > 1:527499/1‑100 (MQ=255) ttGCTCTCTTTCAAGTTGCCTTTTCGAGTCTAGAAAAGCAACTTCATCAAATTTACTGATTAATTCATCAGAATATCTAAGTTTTCCGCAGCCAAAATCa < 2:2869681/100‑1 (MQ=255) tGCTCTCTTTCAAGTTGCCTTTTCGAGTCTAGAAAAGTAACTTCATCAAATTTACTGATTAATTCATCAGAATATCTAAGTTTTCCGCAGCCAAAATCaa > 2:1845592/1‑100 (MQ=255) tGCTCTCTTTCAAGTTGCCTTTTCGAGTCTAGAAAAGCAACTTCATCAAATTTACTGATTAATTCATCAGAATATCTAAGTTTTCCGCAGCCAAAATCaa > 1:3131906/1‑100 (MQ=255) ctctctTTCAAGTTGCCTTTTCGAGTCTAGAAAAGTAACTTCATCAAATTTACTGATTAATTCATCAGAATATCTAAGTTTTCCGCAGCCAAAATCAAgg > 1:2871949/1‑100 (MQ=255) ctctctTTCAAGTTGCCTTTTCGAGTCTAGAAAAGCAACTTCATCAAATTTACTGATTAATTCATCAGAATATCTAAGTTTTCCGCAGCCAAAATCAAgg > 1:3385733/1‑100 (MQ=255) tctctTTCAAGTTGCCTTTTCGAGTCTAGAAAAGTAACTTCATCAAATTTACTGATTAATTCATCAGAATATCTAAGTTTTCCGCAGCCAAAATCAAggg < 1:1464110/100‑1 (MQ=255) tctctTTCAAGTTGCCTTTTCGAGTCTAGAAAAGTAACTTCATCAAATTTACTGATTAATTCATCAGAATATCTAAGTTTTCCGCAGCCAAAATCAAggg < 1:3880033/100‑1 (MQ=255) ctTTCAAGTTGCGTTTTCGAGTCTAGAAAAGTAACTTCATCAAATTTACTGATTAATTCATCAGAATATCTAAGTTTTCCGCAGCCAAAATCAAGGGCGt > 1:2714083/1‑100 (MQ=255) cAAGTTGCCTTTTCGAGTCTAGAAAAGTAACTTCATCAAATTTACTGATTAATTCATCAGAATATCTAAGTTTTCCGCAGCCAAAATCAAGGGCGTGGcc > 1:3167885/1‑100 (MQ=255) gTTGCCTTTTCGAGTCTAGAAAAGTAACTTCATCAAATTTACTGATTAATTCATCAGAATATCTAAGTTTTCCGCAGCCAAAATCAAGGGCGTGGCCAtt < 1:1648779/100‑1 (MQ=255) gTTGCCTTTTCGAGTCTAGAAAAGCAACTTCATCAAATTTACTGATTAATTCATCAGAATATCTAAGTTTTCCGCAGCCAAAATCAAGGGCGTGGCCAtt > 1:1475539/1‑100 (MQ=255) tGCCTTTTCGAGTCTAGAAAAGTAACTTCATCAAATTTACTGATTAATTCATCAGAATATCTAAGTTTTCCGCAGCCAAAATCAAGGGCGTGGCCAtttt > 2:3134168/1‑100 (MQ=255) gCCTTTTCGAGTCTAGAAAAGTAACTTCATCAAATTTACTGATTAATTCATCAGAATATCTAAGTTTTCCGCAGCCAAAATCAAGGGCGTGGCCAttttt > 2:422014/1‑100 (MQ=255) gCCTTTTCGAGTCTAGAAAAGTAACTTCATCAAATTTACTGATTAATTCATCAGAATATCTAAGTTTTCCGCAGCCAAAATCAAGGGCGTGGCCAttttt > 2:161904/1‑100 (MQ=255) ccTTTTCGAGTCTAGAAAAGTAACTTCATCAAATTTACTGATTAATTCATCAGAATATCTAAGTTTTCCGCAGCCAAAATCAAGGGCGTGGCCATTTTtc < 2:1677410/100‑1 (MQ=255) ccTTTTCGAGTCTAGAAAAGTAACTTCATCAAATTTACTGATTAATTCATCAGAATATCTAAGTTTTCCGCAGCCAAAATCAAGGGCGTGGCCATTTTtc > 1:586316/1‑100 (MQ=255) ccTTTTCGAGTCTAGAAAAGCAACTTCATCAAATTTACTGATTAATTCATCAGAATATCTAAGTTTTCCGCAGCCAAAATCAAGGGCGTGGCCATTTTtc < 1:615602/100‑1 (MQ=255) cTTTTCGAGTCTAGAAAAGCAACTTCATCAAATTTACTGATTAATTCATCAGAATATCTAAGTTTTCCGCAGCCAAAATCAAGGGCGTGGCCATTTTtct > 1:1328074/1‑100 (MQ=255) cTTTTCGAGTCTAGAAAAGCAACTTCATCAAATTTACAGATTAATTCATCAGAATATCTAAGTTTTCCGCAGCCAAAATCAAGGGCGTGGCCATTTTtct > 2:2214463/1‑100 (MQ=255) ttttCGAGTCTAGAAAAGTAACTTCATCAAATTTACTGATTAATTCATCAGAATATCTAAGTTTTCCGCAGCCAAAATCAAGGGCGTGGCCATTTTtctc < 1:3090248/100‑1 (MQ=255) tttCGAGTCTAGAAAAGTAACTTCATCAAATTTACTGATTAATTCATCAGAATATCTAAGTTTTCCGCAGCCAAAATCAAGGGCGTGGCCATTTTTCTCa < 2:320177/100‑1 (MQ=255) ttCGAGTCTAGAAAAGTAACTTCATCAAATTTACTGATTAATTCATCAGAATATCTAAGTTTTCCGCAGCCAAAATCAAGGGCGTGGCCATTTTTCTCaa < 2:3612305/100‑1 (MQ=255) ttCGAGTCTAGAAAAGTAACTTCATCAAATTTACTGATTAATTCATCAGAATATCTAAGTTTTCCGCAGCCAAAATCAAGGGCGTGGCCATTTTTCTCaa < 1:3049817/100‑1 (MQ=255) cGAGTCTAGAAAAGTAACTTCATCAAATTTACTGATTAATTCATCAGAATATCTAAGTTTTCCGCAGCCAAAATCAAGGGCGTGGCCATTTTTCTCAATg > 2:2915339/1‑100 (MQ=255) gAGTCTAGAAAAGTAACTTCATCAAATTTACTGATTAATTCATCAGAATATCTAAGTTTTCCGCAGCCAAAATCAAGGGCGTGGCCATTTTTCTCAATGc < 2:1326970/100‑1 (MQ=255) gAGTCTAGAAAAGTAACTTCATCAAATTTACTGATTAATTCATCAGAATAACTAAGTTTTCCGCAGCCAAAATCAAGGCCGAGGCCATTTTTCTCAATGc > 2:1310665/1‑100 (MQ=255) gTCTAGCAAAGCAACTTCATCAAATTTACTGATTAATTAATCAGAATATCTAAGTTTTCCGCAGCCAAAATCAAGGGCGTGGCCATTTTTCTCAATGCtt > 2:843252/1‑100 (MQ=255) gTCTAGAAAAGTAACTTCATCAAATGTACTGATTAATTCATCAGAATATCTAAGTTTTCCGCAGCCAAAATCAAGGGCGTGGCCATTTTTCTCAATGCtt < 2:3974271/100‑1 (MQ=255) tCTAGAAAAGCAACTTCATCAAATTTACTGATTAATTCATCAGAATATCTAAGTTTTCCGCAGCCAAAATCAAGGGCGTGGCCATTTTTCTCAATGCTTc > 1:3938517/1‑100 (MQ=255) tCTAGAAAAGCAACTTCATCAAATTTACTGATTAATTCATCAGAATATCTAAGTTTTCCGCAGCCAAAATCAAGGGCGTGGCCATTTTTCTCAATGCTTc < 1:1656258/100‑1 (MQ=255) cTAGAAAAGTAACTTCATCAAATTTACTGATTAATTCATCAGAATATCTAAGTTTTCCGCAGCCAAAATCAAGGGCGTGGCCATTTTTCTCAATGCTTCt > 1:2871808/1‑100 (MQ=255) cTAGAAAAGTAACTTCATCAAATTTACTGATTAATTCATCAGAATATCTAAGTTTTCCGCAGCCAAAATCAAGGGCGTGGCCATTTTTCTCAATGCTTCt > 2:1057753/1‑100 (MQ=255) tAGAAAAGTAACTTCATCAAATTTACTGATTAATTCATCAGAATATCTAAGTTTTCCGCAGCCAAAATCAAGGGCGTGGCCATTTTTCTCAATGCTTCTa > 2:3794331/1‑100 (MQ=255) tAGAAAAGTAACTTCATCAAATTTACTGATTAATTCATCAGAATATCTAAGTTTTCCGCAGCCAAAATCAAGGGCGTGGCCATTTTTCTCAAAGCTTCTa < 2:2162977/100‑1 (MQ=255) gAAAAGTAACTTCATCAAATTTACTGATTAATTCATCAGAATATCTAAGTTTTCCGCAGCCAAAATCAAGGGCGTGGCCATTTTTCTCAATGCTTCTAat > 1:1672980/1‑100 (MQ=255) aaaaGTAACTTCATCAAATTTACTGATTAATTCATCAGAATATCTAAGTTTTCCGCAGCCAAAATCAAGGGCGTGGCCATTTTTCTCAATGCTTCTAat < 2:3941529/99‑1 (MQ=255) aaaaGCAACTTCATCAAATTTACTGATTAATTCATCAGAATATCTAAGTTTTCCGCAGCCAAAATCAAGGGCGTGGCCATTTTTCTCAATGCTTCTAata < 1:2950380/100‑1 (MQ=255) aaGTAACTTCATCAAATTTACTGATTAATTCATCAGAATATCTAAGTTTTCCGCAGCCAAAATCAAGGGCGTGGCCATTTTTCTCAATGCTTCTAAtata < 2:2533512/100‑1 (MQ=255) aGTAACTTCATCAAATTTACTGATTAATTCATCAGAATATCTAAGTTTTCCGCAGCCAAAATCAAGGGCGTGGCCATTTTTCTCAATGCTTCTAATATAc > 1:3528134/1‑100 (MQ=255) gTAACTTCATCAAATTTACTGATTAATTCATCAGAATATCTAAGTTTTTCGCAGCCAAAATCAAGGGCGTGGCCATTTTTCTCAATGCTTCTAATATACt > 2:708925/1‑100 (MQ=255) gTAACTTCATCAAATTTACTGATTAATTCATCAGAATATCTAAGTTTTCCGCAGCCAAAATCAAGGGCGTGGCCATTTTTTTCAATGCTTCTAATATACt > 2:2130296/1‑100 (MQ=255) gTAACTTCATCAAATTTACTGATTAATTCATCAGAATATCTAAGTTTTCCGCAGCCAAAATCAAGGGCGTGGCCATTGTTTTCAATGTTTCTAATATAc > 2:2782079/1‑99 (MQ=255) | TGCATTTTTATAATATCGTGGGACATAGTCAATAATTTTAGTTTTAATTCCTCTAATAATTTGCTCTCTTTCAAGTTGCCTTTTCGAGTCTAGAAAAGTAACTTCATCAAATTTACTGATTAATTCATCAGAATATCTAAGTTTTCCGCAGCCAAAATCAAGGGCGTGGCCATTTTTCTCAATGCTTCTAATATACT > NC_000913/1197242‑1197438 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |