Predicted mutation
evidence seq id position mutation annotation gene description
JC NC_000913 190,553 Δ14 bp coding (680‑693/726 nt) rpsB → 30S ribosomal subunit protein S2

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 1905521 (0.020)42 (0.790) 34/196 0.8 97.7% coding (679/726 nt) rpsB 30S ribosomal subunit protein S2
?NC_000913 190567 = 1 (0.020)coding (694/726 nt) rpsB 30S ribosomal subunit protein S2

GACGGTGTTGACTTCGTTATCCCGGG‑TAACGACGACGCAATCCGTGCTGTGACCCTGTACCTGGGCGCTGTTGCTGCAACCGTACGTGAAGGCCGTTCTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/190453‑190552
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cCAGGCGGAAGAAAGCTTCGTAGAAGCTGAGTAATAAGGCTTGATAACTCCCCCAAAATAGTTCGAGTTGCAGAAAGGCGGCAAGCTCGAGAATTCCCGG  >  NC_000913/190567‑190665
                                                                                                                                                                                                        
GACGGTGTTGACTTCGTTATCCCGGG‑TAACGACGACGCAATCCGTGCTGTGACCCTGTACCTGGGCGCTGTTGCTGCAACCGTACGTGAAGGCCGTTCTC                                                                                                     <  2:482744/100‑1
 ACGGTGTTGACTTCGTTATCCCGGG‑TAACGACGACGCAATCCGTGCTGTGACCCTGTACCTCGGCGCTGTTGCTGCAACCGTACGTTAAGGCCGTTCTCC                                                                                                    <  2:806426/100‑1
     TGTTGACTTCGTTATCCCGGG‑TAACGACGACGCAATCCGTGCTGTGACCCTGTACCTGGGCGCTGTTGCTGCAACCGTACGTGAAGGCCGTTCTCCAGGC                                                                                                <  2:1269352/100‑1
        cgtcgTCGTTA‑CCCGGGATAACGACGACGCAATCCGTGCTGTGACCCTGTACCTGGGCGCTGTTGCTGCAACCGTACGTGAAGGCCGTTCTCCAGGCGGA                                                                                             >  2:148615/6‑100
        TGACTTCGTTATCCCGGG‑TAACGACGACGCAATCCGTGCTGTGACCCTGTACCTGGGCGCTGTTGCTGCAACCGTACGTGAAGGCCGTTCTCCAGGCGGA                                                                                             >  1:709133/1‑100
           CTTCGTTATCCCGGG‑TAACGACGACGCAATCCGTGCTGTGACCCTGTACCTGGGCGCTGTTGCTGCAACCGTACGTGAAGGCCGTTCTCCAGGCGGAAGA                                                                                          >  2:501084/1‑100
           CTTCGTTATCCCGGG‑TAACGACGACGCAATCCGTGCTGTGACCCTGTACCTGGGCGCTGTTGCTGCAACCGTACGTGAAGGCCGTTCTCCAGGCGGAAGA                                                                                          >  1:236265/1‑100
           CTTCGTTATCCCGGG‑TAACGACGACGCAATCCGTGCTGTGACCCTGTACCTGGGCGCTGTTGCTGCAACCGTACGTGAAGGCCGTTCTCCAGGCGGAAGA                                                                                          >  2:945169/1‑100
              CGTTATCCCGGG‑TAACGACGACGCAATCCGTGCTGTGACCCTGTACCTGGGCGCTGTTGCTGCAACCGTACGTGAAGGCCGTTCTCCAGGCGGAAGAAAG                                                                                       <  1:27113/100‑1
              CGTTATCCCGGG‑TAACGACGACGCAATCCGTGCTGTGACCCTGTACCTGGGCGCTGTTGCTGCAACCGTACGTGAAGGCCGTTCTCCAGGCGGAAGAAAG                                                                                       >  2:807860/1‑100
               GTTATCCCGGG‑TAACGACGACGCAATCCGTGCTGTGACCCTGTACCTGGGCGCTGTTGCTGCAACCGTACGTGAAGGCCGTTCTCCAGGCGGAAGAAAGC                                                                                      >  1:594306/1‑100
                 TATCCCGGG‑TAACGACGACGCAATCCGTGCTGTGACCCTGTACCTGGGCGCTGTTGCTGCAACCGTACGTGAAGGCCGTTCTCCAGTCGGAAGAAAGCct                                                                                    <  1:884536/100‑3
                  ATCCCGGG‑TAACGACGACGCAATCCGTGCTGTGACCCTGTACCTGGGCGCTGTTGCTGCAACCGTACGTGAAGGCCGTTCTCCAGGCGGAAGAAAGCTTC                                                                                   >  2:492946/1‑100
                  ATCCCGGG‑TAACGACGACGCAATCCGTGCTGTGACCCTGTACCTGGGCGCTGTTGCTGCAACCGTACGTGAAGGCCGTTCTCCAGGCGGAAGAAAGCTTC                                                                                   <  1:443021/100‑1
                  ATCCCGGG‑TAACGACGACGCAATCCGTGCTGTGACCCTGTACCTGGGCGCTGTTGCTGCAACCGTACGTGAAGGCCGTTCTCCAGGCGGAAGAAAGCTTC                                                                                   >  2:626191/1‑100
                   TCCCGGG‑TAACGACGACGCAATCCGTGCTGTGACCCTGTACCTGGGCGCTGTTGCTGCAACCGTACGTGAAGGCCGTTCTCCAGGCGGAAGAAAGCTTCG                                                                                  >  1:334702/1‑100
                       GGG‑TAACGACGACGCAATCCGTGCTGTGACCCTGTACCTGGGCGCTGTTGCTGCAACCGTACGTGAAGGCCGTTCTCCAGGCGGAAGAAAGCTTCGTAGA                                                                              <  2:96525/100‑1
                                     GCAATCCGTGCTGTGACCCTGTACCTGGGCGCTGTTGCTGCAACCGTACGTGAAGGCCGTTCTCCAGGCGGAAGAAAGCTTCGTAGAAGCTGAGTAATAA                                                                 >  2:1236550/1‑100
                                       AATCCGTGCTGTGACCCTGTACCTGGGCGCTGTTGCTGCAACCGTACGTGAAGGCCGTTCTCCAGGCGGAAGAAAGCTTCGTAGAAGCTGAGTAATAAGG                                                               >  1:278147/1‑100
                                       AATCCGTGCTGTGACCCTGTACCTGGGCGCTGTTGCTGCAACCGTACGTGAAGGCCGTTCTCCAGGCGGAAGAAAGCTTCGTAGAAGCTGAGTAATAAGG                                                               <  1:54271/100‑1
                                        ATCCGTGCTGTGACCCTGTACCTGGGCGCTGTTGCTGCAACCGTACGTGAAGGCCGTTCTCCAGGCGGAAGAAAGCTTCGTAGAAGCTGAGTAATAAGGC                                                              >  1:1148718/1‑100
                                                   GACCCTGTACCTGGGCGCTGTTGCTGCAACCGTACGTGAAGGCCGTTCTCCAGGCGGAAGAAAGCTTCGTAGAAGCTGAGTAATAAGGCTTGATAACTCC                                                   >  2:257546/1‑100
                                                       CTGTACCTGGGCGCTGTTGCTGCAACCGTACGTGAAGGCCGTTCTCCAGGCGGAAGAAAGCTTCGTAGAAGCTGAGTAATAAGGCTTGATAACTCCCCCA                                               >  1:146987/1‑100
                                                          TACCTGGGCGCTGTTGCTGCAACCGTACGTGAAGGCCGTTCTCCAGGCGGAAGAAAGCTTCGTAGAAGCTGAGTAATAAGGCTTGATAACTCCCCCAAAA                                            <  1:346190/100‑1
                                                               GGGCGCTGTTGCTGCAACCGTACGTGAAGGCCGTTCTCCAGGCGGAAGAAAGCTTCGTAGAAGCTGATTAATAAGGCTTGATAACTCCCCCAAAATAGTT                                       <  1:1236561/100‑1
                                                                GGCGCTGTTGCTGCAACCGTACGTGAAGGCCGTTCTCCAGGCGGAAGAAAGCTTCGTAGAAGCTGAGTAATAAGGCTTGATAACTCCCCCAAAATAGTTC                                      <  2:146985/100‑1
                                                                 GCGCTGTTGCTGCAACCGTACGTGAAGGCCGTTCTCCAGGCGGAAGAAAGCTTCGTAGAAGCTGAGTAATAAGGCTTGATAACTCCCCCAAAATAGTTCG                                     <  2:824942/100‑1
                                                                     TGTTGCTGCAACCGTACGTGAAGGCCGTTCTCCAGGCGGAAGAAAGCTTCGTAGAAGCTGAGTAATAAGGCTTGATAACTCCCCCAAAATAGTTCGAGTT                                 >  2:101100/1‑100
                                                                      GTTGCTGCAACCGTACGTGAAGGCCGTTCTCCAGGCGGAAGAAAGCTTCGTAGAAGCTGAGTAATAAGGCTTGATAACTCCCCCAAAATAGTTCGAGTTG                                <  2:334699/100‑1
                                                                      GTTGCTGCAACCGTACGTGAAGGCCGTTCTCCAGGCGGAAGAAAGCTTCGTAGAAGCTGAGTAATAAGGCTTGATAACTCCCCCAAAATAGTTCGAGTTG                                <  2:973104/100‑1
                                                                        TGCTGCAACCGTACGTGAAGGCCGTTCTCCAGGCGGAAGAAAGCTTCGTAGAAGCTGAGTAATAAGGCTTGATAACTCCCCCAAAATAGTTCGAGTTGCA                              >  1:953559/1‑100
                                                                          CTGCAACCGTACGTGAAGGCCGTTCTCCAGGCGGAAGAAAGCTTCGTAGAAGCTGAGTAATAAGGCTTGATAACTCCCCCAAAATAGTTCGAGTTGCAGA                            >  2:1005573/1‑100
                                                                          CTGCAACCGTACGTGAAGGCCGTTCTCCAGGCGGAAGAAAGCTTCGTAGAAGCTGAGTAATAAGGCTTGATAACTCCCCCAAAATAGTTCGAGTTGCAGA                            >  2:63404/1‑100
                                                                          CTGCAACCGTACGTGAAGGCCGTTCTCCAGGCGGAAGAAAGCTTCGTAGAAGCTGAGTAATAAGGCTTGATAACTCCCCCAAAATAGTTCGAGTTGCAGA                            >  1:14068/1‑100
                                                                           TGCAACCGTACGTGAAGGCCGTTCTCCAGGCGGAAGAAAGCTTCGTAGAAGCTGAGTAATAAGGCTTGATAACTCCCCCAAAATAGTTCGAGTTGCAGAA                           >  1:1158366/1‑100
                                                                            GCAACCGTACGTGAAGGCCGTTCTCCAGGCGGAAGAAAGCTTCGTAGAAGCTGAGTAATAAGGCTTGATAACTCCCCCAAAATAGTTCGAGTTGCAGAAA                          >  2:599426/1‑100
                                                                               ACCGTACGTGAAGGCCGTTCTCCAGGCGGAAGAAAGCTCCGTAGAAGCTGAGTAATAAGGCTTGATAACTCCCCCAAAATAGTTCGAGTTGCAGAAAGGC                       >  1:718042/1‑100
                                                                                CCGTACGTGAAGGCCGTTCTCCAGGCGGAAGAAAGCTTCGTAGAAGCTGAGTAATAAGGCTTGATAACTCCCCCAAAATAGTTCGAGTTGCAGAAAGGCG                      >  2:1254640/1‑100
                                                                                 CGTACGTGAAGGCCGTTCTCCAGGCGGAAGAAAGCTTCGTAGAAGCTGAGTAATAAGGCTTGATAACTCCCCCAAAATAGTTCGAGTTGCAGAAAGGCGG                     >  1:361547/1‑100
                                                                                    ACGTGAAGGCCGTTCTCCAGGCGTAAGAAAGCTTCGTAGAAGCTGAGTAATAAGGCTTGATAACTCCCCCAAAATAGTTCGAGTTGCAGAAAGGCGGCA                   <  2:1296195/99‑1
                                                                                     CGTGAAGGCCGTTCTCCAGGCGGAAGAAAGCTTCGTAGAAGCTGAGTAATAAGGCTTGATAACTCCCCCAAAATAGTTCGAGTTGCAGAAAGGCGGCAAG                 >  1:37459/1‑100
                                                                                                 TCTCCAGGCGGAAGAAAGCTTCGTATAAGCTGAGTAATAAGGCTTGATAACTCCCCCAAAATAGTTCGAGTTGCAGAAAGGCGGCAAGCTCGAGAATTCC     <  2:1061148/100‑1
                                                                                                 TCTCCAGGCGGAAGAAAGCTTCGTAGAAGCTGAGTAATAAGGCTTGATAACTCCCCCAAAATAGTTCGAGTTGCAGAAAGGCGGCAAGCTCGAGAATTCC     >  1:1146072/1‑100
                                                                                                    CCAGGCGGAAGAAAGCTTCGTAGAAGCTGAGTAATAAGGCTTGATAACTCCCCCAAAATAGTTCGAGTTGCAGAAAGGCGGCAAGCTCGAGAATTCCCGG  >  2:958443/1‑100
                                                                                                                                                                                                        
GACGGTGTTGACTTCGTTATCCCGGG‑TAACGACGACGCAATCCGTGCTGTGACCCTGTACCTGGGCGCTGTTGCTGCAACCGTACGTGAAGGCCGTTCTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/190453‑190552
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cCAGGCGGAAGAAAGCTTCGTAGAAGCTGAGTAATAAGGCTTGATAACTCCCCCAAAATAGTTCGAGTTGCAGAAAGGCGGCAAGCTCGAGAATTCCCGG  >  NC_000913/190567‑190665

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.