| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 3056789 = | 52 (0.970) | 6 (0.120) | 6/182 | 6.7 | 10.6% | coding (549/549 nt) | fau | 5‑formyltetrahydrofolate cyclo‑ligase family protein |
| ? | NC_000913 | 3056813 = | 53 (1.080) | intergenic (+24/+77) | fau/ibsC | 5‑formyltetrahydrofolate cyclo‑ligase family protein/toxic membrane protein | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below cutoff threshold. | |||||||||||
TGCGCATGATTGTCAGTTGGTGGAAAAACTCCCCGTTGAAGAGTGGGATATCC‑‑CTCTTCCTGCGGTGGTTACACCGTCGAAAGTCTGGGAGTGGTAAGGGCGATACACCCGCATCGCCCTGATTGACATCGTTGATTCTTTGACCTAATTTAGTGAGTAAGGGTAAGGGAGGATTGCTCCTCCCCTGAGACTGACT > NC_000913/3056693‑3056888 | tGCGCATGATTGTCAGTTGGTGGAAAAACTCCCCGTTGAAGAGTGGGATATCC‑‑CTCTTCCTGCGGTGGTTACACCGTCGAAAGTCTGGGAGTGGTAAggg < 1:213770/100‑1 (MQ=255) cgcATGATTGTCAGTTGGTGGAAAAACTCCCCGTTGAAGAGTGGGATATCC‑‑CTCTTCCTGCGGTGGTTACACCGTCGAAAGTCTGGGAGTGGTAAGGGCg > 2:340050/1‑100 (MQ=255) cgcATGATTGTCAGTTGGTGGAAAAACTCCCCGTTGAAGAGTGGGATATCC‑‑CTCTTCCTGCGGTGGTTACACCGTCGAAAGTCTGGGAGTGGTAAGGGCg > 1:28358/1‑100 (MQ=255) tGATTGTCAGTTGGTGGAAAAACTCCCCGTTGAAGAGTGGGATATCC‑‑CTCTTCCTGCGGTGGTTACACCGTCGAAAGTATGGGAGTGGTAAGGGCGATac > 2:627916/1‑100 (MQ=255) gATTGTCGGTTAGTGGAAAAACTCCCCGTTGAAGAGTGGGATATCC‑‑CTCTTCCTGCGGTGGTTACACCGTCGAAAGTCTGGGAGTGGTAAGGGCGATaca > 2:686824/1‑100 (MQ=255) tCAGTTGGTGGAAAAACTCCCCGTTGAAGAGTGGGATATCC‑‑CTCTTCCTGCGGTGGTTACACCGTCGAAAGTCTGGGAGTGGTAAGGGCGATACACCCGc < 2:885898/100‑1 (MQ=255) cAGTTGGTGGAAAAACTCCCCGTTGAAGAGTGGGATATCC‑‑CTCTTCCTGCGGTGGTTACACCGTCGAAAGTCTGGGAGTGGTAAGGGCGATACACCCGCa < 2:860986/100‑1 (MQ=255) ggtggAAAAACTCCCCGTTGAAGAGTGGGATATCC‑‑CTCTTCCTGCGGTGGTTACACCGTCGAAAGTCTGGGAGTGGTAAGGGCGATACACCCGCATCGcc < 1:445697/100‑1 (MQ=255) gtggAAAAACTCCCCGTTGAAGAGTGGGATATCC‑‑CTCTTCCTGCGGTGGTTACACCGTCGAAAGTCTGGGAGTGGTAAGGGCGATACACCCGCATCGccc > 1:1178087/1‑100 (MQ=255) ggAAAAACTCCCCGTTGAAGAGTGGGATATCC‑‑CTCTTCCTGCGGTGGTTACACCGTCGAAAGTCTGGGAGTGGTAAGGGCGATACACCCGCATCGCCCTg > 2:1106671/1‑100 (MQ=255) ggAAAAACTCCCCGTTGAAGAGTGGGATATCC‑‑CTCTTCCTGCGGTGGTTACACCGTCGAAAGTCTGGGAGTGGTAAGGGCGATACACCCGCATCGCCCTg > 2:27180/1‑100 (MQ=255) ggAAAAACTCCCCGTTGAAGAGTGGGATATCC‑‑CTCTTCCTGCGGTGGTTACACCGTCGAAAGTCTGGGAGTGGTAAGGGCGATACACCCGCATCGCCCTg > 2:1243874/1‑100 (MQ=255) gAAAAACTCCCCGTTGAAGAGTGGGATATCC‑‑CTCTTCCTGCGGTGGTTACACCGTCGAAAGTCTGGGAGTGGTAAGGGCGATACACCCGCATCGCCCTGa > 2:34834/1‑100 (MQ=255) ccccGTTGAAGAGTGGGATATCC‑‑CTCTTCCTGCGGTGGTTACACCGTCGAAAGTCTGGGAGTGGTAAGGGCGATACACCCGCATCGCCCTGATTGACATc > 2:431976/1‑100 (MQ=255) ccccGTTGAAGAGTGGGATATCC‑‑CTCTTCCTGCGGTGGTTACACCGTCGAAAGTCTGGGAGTGGTAAGGGCGATACACCCGCATCGCCCTGATTGACATc > 2:479758/1‑100 (MQ=255) cccGTTGAAGAGTGGGATATCC‑‑CTCTTCCTGCGGTGGTTACACCGTCGAAAGTCTGGGAGTGGTAAGGGCGATACACCCGCATCGCCCTGATTGACATCg > 2:495515/1‑100 (MQ=255) cGTTGAAGAGTGGGATATCC‑‑CTCTTCCTGCGGTGGTTACACCGTCGAAAGTCTGGGAGTGGTAAGGGCGATACACCCGCATCGCCCTGATTGACATCGtt < 2:1224559/100‑1 (MQ=255) gTTGAAGAGTGGGATATCC‑‑CTCTTCCTGCGGTGGTTACACCGTCGAAAGTCTGGGAGTGGTAAGGGCGATACACCCGCATCGCCCTGATTGACATCGTTg < 2:919123/100‑1 (MQ=255) gTTGAAGAGTGGGATATCC‑‑CTCTTCCTGCGGTGGTTACACCGTCGAAAGTCTGGGAGTGGTAAGGGCGATACACCCGCATCGCCCTGATTGACATCGTTg < 1:1036840/100‑1 (MQ=255) gAAGAGTGGGATATCC‑‑CTCTTCCTGCGGTGGTTACACCGTCGAAAGTCTGGGAGTGGTAAGGGCGATACACCCGCATCGCCCTGATTGACATCGTTGAtt > 1:523884/1‑100 (MQ=255) ggaagagggATATCCCACTCTTCCTGCGGTGGTTACACCGTCGAAAGTCTGGGAGTGGTAAGGGCGATACACCCGCATCGCCCTGATTGACATCGTTGAt > 1:922924/7‑100 (MQ=255) gTGGGATATCC‑‑CTCTTCCTGCGGTGGTTACACCGTCGAAAGTCTGGGAGTGGTAAGGGCGATACACCCGCATCGCCCTGATTGACATCGTTGATTCTTTg < 2:623038/100‑1 (MQ=255) gggATATCC‑‑CTCTTCCTGCGGTGGTTACACCGTCGAAAGTCTGGGAGTGGTAAGGGCGATACACCCGCATCGCCCTGATTGACATCGTTGATTCTTTGAc < 1:431980/100‑1 (MQ=255) ggATATCC‑‑CTCTTCCTGCGGTGGTTACACCGTCGAAAGTCTGGGAGTGGTAAGGGCGATACACCCGCATCGCCCTGATTGACATCGTTGATTCTTTGAcc < 2:1012182/100‑1 (MQ=255) atatCC‑‑CTCTTCCTGCGGTGGTTACACCGTCGAAAGTCTGGGAGTGGTAAGGGCGATACACCCGCATCGCCCTGATTGACATCGTTGATTCTTTGACCTa < 2:1201132/100‑1 (MQ=255) atCC‑‑CTCTTCCTGCGGTGGTTACACCGTCGAAAGTCTGGGAGTGGTAAGGGCGATACACCCGCATCGCCCTGATTGACATCGTTGATTCTTTGACCTAAt > 2:279990/1‑100 (MQ=255) tCC‑‑CTCTTCCTGCGGTGGTTACACCGTCGAAAGTCTGGGAGTGGTAAGGGCGATACACCCGCATCGCCCTGATTGACATCGTTGATTCTTTGACCTAAtt > 1:1266621/1‑100 (MQ=255) cc‑‑cTCTTCCTGCGGTGGTTACACCGTCGAAAGTCTGGGAGTGGTAAGGGCGATACACCCGCATCGCCCTGATTGACATCGTTGATTCTTTGACCTAAttt > 2:1053824/1‑100 (MQ=255) ctTCCTGCGGTGGTTACACCGTCGAAAGTCTGGGAGTGGTAAGGGCGATACACCCGCATCGCTCTGATTGACATCGTTGATTCTTTGACCTAATTTAGTg < 2:696212/100‑1 (MQ=255) ctTCCTGCGGTGGTTACACCGTCGAAAGTCTGGGAGTGGTAAGGGCGATACACCCGCATCGCCCTGATTGACATCGTTGATTCTTTGACCTAATTTAGTg < 2:383245/100‑1 (MQ=255) tCCTGCGGTGGTTACACCGTCGAAAGTCTGGGAGTGGTAAGGGCGATACACCCGCATCGCCCTGATTGACATCGTTGATTCTTTGACCTAATTTAGTGAg < 1:235968/100‑1 (MQ=255) cTGCGGTGGTTACACCGTCGAAAGTCTGGGAGTGGTAAGGGCGATACACCCGCATCGCCCTGATTGACATCGTTGATTCTTTGACCTAATTTAGTGAgta < 2:782652/100‑1 (MQ=255) gCGGTGGTTACACCGTCGAAAGTCTGGGAGTGGTAAGGGCGATACACCCGCATCGCCCTGATTGACATCGTTGATTCTTTGACCTAATTTAGTGAgtaag > 1:666716/1‑100 (MQ=255) gCGGTGGTTACACCGTCGAAAGTCTGGGAGTGGTAAGGGCGATACACCCGCATCGCCCTGATTGACATCGTTGATTCTTTGACCTAATTTAGTGAgtaag < 1:27180/100‑1 (MQ=255) ttACACCGTCGAAAGTCTGGGAGTGGTAAGGGCGATACACCCGCATCGCCCTGATTGACATCGTTGATTCTTTGACCTAATTTAGTGAgtaagggtaagg < 2:660683/100‑1 (MQ=255) tACACCGTCGAAAGTCTGGGAGTGGTAAGGGCGATACACCCGCATCGCCCTGATTGACATCGTTGATTCTTTGACCTAATTTAGTGAGtaagggtaaggg < 1:276052/100‑1 (MQ=255) tACACCGTCGAAAGTCTGGGAGTGGTAAGGGCGATACACCCGCATCGCCCTGATTGACATCGTTGATTCTTTGACCTAATTTAGTGAGtaagggtaaggg < 1:275772/100‑1 (MQ=255) gTCGAAAGTCTGGGAGTGGTAAGGGCGATACACCCGCATCGCCCTGATTGACATCGTTGATTCTTTGACCTAATTTAGTGAGTAAGGGTAAGGGAGGAtt > 2:715986/1‑100 (MQ=255) gTCGAAAGTCTGGGAGTGGTAAGGGCGATACACCCGCATCGCCCTGATTGACATCGTTGATTCTTTGACCTAATTTAGTGAGTAAGGGTAAGGGAGGAtt > 2:321300/1‑100 (MQ=255) gAAAGTCTGGGAGTGGTAAGGGCGATACACCCGCATCGCCCTGATTGACATCGTTGATTCTTTGACCTAATTTAGTGAGTAAGGGTAAGGGAGGATTGct < 1:276837/100‑1 (MQ=255) aaaGTCTGGGAGTGGTAAGGGCGATACACCCGCATCGCCCTGATTGACATCGTTGATTCTTTGACCTAATTTAGTGAGTAAGGGTAAGGGAGGATTGctc > 1:322259/1‑100 (MQ=255) aaGTCTGGGAGTGGTAAGGGCGATACACCCGCATCGCCCTGATTGACATCGTTGATTCTTTGACCTAATTTAGTGAGTAAGGGTAAGGGAGGATTGctcc < 2:801374/100‑1 (MQ=255) cTGGGAGTGGTAAGGGCGATACACCCGCATCGCCCTGATTGACATCGTTGATTCTTTGACCTAATTTAGTGAGTAAGGGTAAGGGAGGATTGCTCCTccc < 1:666747/100‑1 (MQ=255) cTGGGAGTGGTAAGGGCGATACACCCGCATCGCCCTGATTGACATCGTTGATTCTTTGACCTAATTTAGTGAGTAAGGGTAAGGGAGGATTGCTCCTccc < 1:1156603/100‑1 (MQ=255) cTGGGAGTGGTAAGGGCGATACACCCGCATCGCCCTGATTGACATCGTTGATTCTTTGACCTAATTTAGTGAGTAAGGGTAAGGGAGGATTGCTCCTccc < 2:150184/100‑1 (MQ=255) tGGGAGTGGTAAGGGCGATACACCCGCATCGCCCTGATTGACATCGTTGATTCTTTGACCTAATTTAGTGAGTAAGGGTAAGGGAGGATTGCTCCTcccc > 1:1189640/1‑100 (MQ=255) aGTGGTAAGGGCGATACACCCGCATCGCCCTGATTGACATCGTTGATTCTTTGACCTAATTTAGTGAGTAAGGGTAAGGGAGGATTGCTCCTCCCCTgag < 1:613050/100‑1 (MQ=255) aGTGGTAAGGGCGATACACCCGCATCGCCCTGATTGACATCGTTGATTCTTTGACCTAATTTAGTGAGTAAGGGTAAGGGAGGATTGCTCCTCCCCTgag < 2:1093233/100‑1 (MQ=255) gTGGTAAGGGCGATACACCCGCATCGCCCTGATTGACATCGTTGATTCTTTGACCTAATTTAGTGAGTAAGGGTAAGGGAGGATTGCTCCTCCCCTgaga < 1:824416/100‑1 (MQ=255) tGGTAAGGGCGATACACCCGCATCGCCCTGATTGACATCGTTGATTCTTTGACCTAATTTAGTGAGTAAGGGTAAGGGAGGATTGCTCCTCCCCTGAgac < 1:1106681/100‑1 (MQ=255) gTAAGGGCGATACACCCGCATCGCCCTGATTGACATCGTTGATTCTTTGACCTAATTTAGTGAGTAAGGGTAAGGGAGGATTGCTCCTCCCCTGAgactg > 1:664596/1‑100 (MQ=255) aaGGGCGATACACCCGCATCGCCCTGATTGACATCGTTGATTCTTTGACCTAATTTAGTGAGTAAGGGTAAGGGAGGATTGCTCCTCCCCTGAgcctgcc > 1:371429/1‑98 (MQ=255) aGGGCGATACACCCGCATCGCCCTGATTGACATCGTTGATTCTTTGACCTAATTTAGTGAGTAAGGGTAAGGGAGGATTGCTCCTCCCCTGAgactgact < 2:28357/100‑1 (MQ=255) aGGGCGATACACCCGCATCGCCCTGATTGACATCGTTGATTCTTTGACCTAATTTAGTGAGTAAGGGTAAGGGAGGATTGCTCCTCCCCTGAgactgact > 2:930898/1‑100 (MQ=255) | TGCGCATGATTGTCAGTTGGTGGAAAAACTCCCCGTTGAAGAGTGGGATATCC‑‑CTCTTCCTGCGGTGGTTACACCGTCGAAAGTCTGGGAGTGGTAAGGGCGATACACCCGCATCGCCCTGATTGACATCGTTGATTCTTTGACCTAATTTAGTGAGTAAGGGTAAGGGAGGATTGCTCCTCCCCTGAGACTGACT > NC_000913/3056693‑3056888 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |