New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 3060667	NA (NA)	6 (0.120)	6/182	6.7	NA	noncoding (8/21 nt)	REP212 (repetitive extragenic palindromic) element; contains 1 REP sequences	REP212 (repetitive extragenic palindromic) element; contains 1 REP sequences
	?	NC_000913	= 3060672	NA (NA)					noncoding (13/21 nt)	REP212 (repetitive extragenic palindromic) element; contains 1 REP sequences	REP212 (repetitive extragenic palindromic) element; contains 1 REP sequences
Rejected: Coverage evenness skew score above cutoff.

CTGAAAGCCGCATGATGCGTAAAGTCACTGATGCGTTACTCGATTATGGTCACAAAGTCCTTCGTCAGGATTAATCCATCAAATAATGCCTGATAGCACATATCAGGCGTTGTCCTCACTTCTTTTTGTATTCCTTGAATCACATCACAAAATAGACAAATCTCAGGCGGCAAAAAACGACGTCTGAATGCATTT  >  NC_000913/3060573‑3060767                                                                                                    |                                                                                                cTGAAAGCCGCATGATGCGTAAAGTCACTGATGCGTTACTCGATTATGGTCACAAAGTCCTTCGTCAGGATTAATCCATCAAATAATGCCTGATAGcaca                                                                                                 <  2:1080311/100‑1 (MQ=255)   gAAAGCCGCATGATGCGTAAAGTCACTGATGCGTTACTCGATTATGGTCACAAAGTCCTTCGTCAGAATTAATCCATCAAATAATGCCTGATAGCACata                                                                                               <  2:249991/100‑1 (MQ=255)    aaaGCCGCATGATGCGTAAAGTCACTGATGCGTTACTCGATTATGGTCACAAAGTCCTTCGTCAGGATTAATCCATCAAATAATGCCTGATAGCACatat                                                                                              >  2:382278/1‑100 (MQ=255)      aGCCGCATGATGCGTAAAGTCACTGATGCGTTACTCGATTATGGTCACAAAGTCCTTCGTCAGGATTAATCCATCAAATAATGCCTGATAGCACATATCa                                                                                            <  2:7589/100‑1 (MQ=255)       gCCGCATGATGCGTAAAGTCACTGATGCGTTACTCGATTATGGTCACAAAGTCCTTCGTCCGGATTAATCCATCAAATAATGCCTGATAGCACATATCAg                                                                                           >  2:540938/1‑100 (MQ=255)       gCCGCATGATGCGTAAAGTCACTGATGCGTTACTCGATTATGGTCACAAAGTCCTTCGTCAGGATTAATCCATCAAATAATGCCTGATAGCACATATCAg                                                                                           >  1:1258019/1‑100 (MQ=255)            atgatgCGTAAAGTCACTGATGCGTTACTCGATTATGGTCACAAAGTCCTTCGTCAGGATTAATCCATCAAATAATGCCGGATAGCACATATCAGGCGt                                                                                       <  2:629470/99‑1 (MQ=255)             tgatgCGTAAAGTCACTGATGCGTTACTCGATTATGGTCACAAAGTCCTTCGTCAGGATTAATCCATCAAATAATGCCTGATAGCACATATCAGGCGTTg                                                                                     <  1:687197/100‑1 (MQ=255)             tgatgCGTAAAGTCACTGATGCGTTACTCGATTATGGTCACAAAGTCCTTCGTCAGGATTAATCCATCAAATAATGCCTGATAGCACATATCAGGCGTTg                                                                                     <  2:219618/100‑1 (MQ=255)             tgatgCGTAAAGTCACTGATGCGTTACTCGATTATGGTCACAAAGTCCTTCGTCAGGATTAATCCATCAAATAATGCCTGATAGCACATATCAGGCGTTg                                                                                     >  1:463546/1‑100 (MQ=255)                tgCGTAAAGTCACTGATGCGTTACTCGATTATGGTCACAAAGTCCTTCGTCAGGATTAATCCATCAAATAATGCCTGATAGCACATATCAGGCGTTGTcc                                                                                  <  1:705903/100‑1 (MQ=255)                tgCGTAAAGTCACTGATGCGTTACTCGATTATGGTCACAAAGTCCTTCGTCAGGATTAATCCATCAAATAATGCCTGATAGCACATATCAGGCGTTGTcc                                                                                  <  1:583994/100‑1 (MQ=255)                   gTAAAGTCACTGATGCGTTACTCGATTATGGTCACAAAGTCCTTCGTCAGGATTAATCCATCAAATAATGCCTGATAGCACATATCAGGCGTTGTCCTCa                                                                               >  1:412121/1‑100 (MQ=255)                     aaaGTCACTGATGCGTTACTCGATTATGGTCACAAAGTCCTTCGTCAGGATTAATCCATCAAATAATGCCTGATAGCACATATCAGGCGTTGTCCTCAct                                                                             <  1:1234587/100‑1 (MQ=255)                     aaaGTCACTGATGCGTTACTCGATTATGGTCACAAAGTCCTTCGTCAGGATTAATCCATCAAATAATGCCTGATAGCACATATCAGGCGTTGTCCTCAct                                                                             >  2:845245/1‑100 (MQ=255)                     aaaGTCACTGATGCGTTACTCGATTATGGTCACAAAGTCCTTCGTCAGGATTAATCCATCAAATAATGCCTGATAGCACATATCAGGCGTCGTCCTCAct                                                                             >  2:845250/1‑100 (MQ=255)                      aaGTCACTGATGCGTTACTCGATTATGGTCACAAAGTCCTTCGTCAGGATTAATCCATCAAATAATGCCTGATAGCACATATCAGGCGTTGTCCTCActt                                                                            <  2:398353/100‑1 (MQ=255)                           aCTGATGCGTTACTCGATTATGGTCACAAAGTCCTTCGTCAGGATTAATCCATCAAATAATGCCTGATAGCACATATCAGGCGTTGTCCTCACTTCtttt                                                                       <  1:638935/100‑1 (MQ=255)                           aCTGATGCGTTACTCGATTATGGTCACAAAGTCCTTCGTCAGGATTAATCCATCAAATAATGCCTGATAGCACATATCAGGCGTTGTCCTCACTTCtttt                                                                       <  2:772530/100‑1 (MQ=255)                            cTGATGCGTTACTCGATTATGGTCACAAAGTCCTTCGTCAGGATTAATCCATCAAATAATGCCTGATAGCACATATCAGGCGTTGTCCTCACTTCttttt                                                                      >  1:398430/1‑100 (MQ=255)                             tGATGCGTTACTCGATTATGGTCACAAAGTCCTTCGTCAGGATTAATCCATCAAATAATGCCTGATAGCACATATCAGGCGTTGTCCTCACTTCTTTTTg                                                                     <  2:453099/100‑1 (MQ=255)                                     tACTCGATTATGGTCACAAAGTCCTTCGTCAGGATTAATCCATCAAATAATGCCTGATAGCACATATCAGGCGTTGTCCTCACTTCTTTTTGTATTCCtt                                                             <  2:623637/100‑1 (MQ=255)                                     tACTCGATTATGGTCACAAAGTCCTTCGTCAGGATTAATCCATCAAATAATGCCTGATAGCACATATCAGGCGTTGTCCTCACTTCTTTTTGTATTCCtt                                                             >  1:1003609/1‑100 (MQ=255)                                       cTCGATTATGGTCACAAAGTCCTTCGTCAGGATTAATCCATCAAATAATGCCTGATAGCACATATCAGGCGTTGTCCTCACTTCTTTTTGTATTCCTTGa                                                           >  1:1219731/1‑100 (MQ=255)                                         cGATTATGGTCACAAAGTCCTTCGTCAGGATTAATCCATCAAATAATGCCTGATAGCACATATCAGGCGTTGTCCTCACTTCTTTTTGTATTCCTTGAat                                                         >  2:863068/1‑100 (MQ=255)                                          gATTATGGTCACAAAGTCCTTCGTCAGGATTAATCCATCAAATAATGCCTGATAGCACATATCAGGCGTTGTCCTCACTTCTTTTTGTATTCCTTGAatc                                                        <  1:421407/100‑1 (MQ=255)                                          gATTATGGTCACAAAGTCCTTCGTCAGGATTAATCCATCAAATAATGCCTGATAGCACATATCAGGCGTTGTCCTCACTTCTTTTTGTATTCCTTGAatc                                                        <  2:292267/100‑1 (MQ=255)                                          gATTATGGTCACAAAGTCCTTCGTCAGGATTAATCCATCAAATAATGCCTGATAGCACATATCAGGCGTTGTCCTCACTTCTTTTTGTATTCCTTGAatc                                                        <  1:1276964/100‑1 (MQ=255)                                           aTTATGGTCACAAAGTCCTTCGTCAGGATTAATCCATCAAATAATGCCTGATAGCACATATCAGGCGTTGTCCTCACTTCTTTTTGTATTCCTTGAatca                                                       >  1:1255445/1‑100 (MQ=255)                                              aTGGTCACAAAGTCCTTCGTCAGGATTAATCCATCAAATAATGCCTGATAGCACATATCAGGCGTTGTCCTCACTTCTTTTTGTATTCCTTGAatcacat                                                    >  1:1146335/1‑100 (MQ=255)                                              aTGGTCACAAAGTCCTTCGTCAGGATTAATCCATCAAATAATGCCTGATAGCACATATCAGGCGTTGTCCTCACTTCTTTTTGTATTCCTTGAatcacat                                                    <  1:554064/100‑1 (MQ=255)                                               tGGTCACAAAGTCCTTCGTCAGGATTAATCCATCAAATAATGCCTGATAGCACATATCAGGCGTTGTCCTCACTTCTTTTTGTATTCCTTGAatcacatc                                                   <  1:139326/100‑1 (MQ=255)                                               tGGTCACAAAGTCCTTCGTCAGGATTAATCCATCAAATAATGCCTGATAGCACATATCAGGCGTTGTCCTCACTTCTTTTTGTATTCCTTGAatcacatc                                                   >  1:553581/1‑100 (MQ=255)                                                 gTCACAAAGTCCTTCGTCAGGATTAATCCATCAAATAATGCCTGATAGCACATATCAGGCGTTGTCCTCACTTCTTTTTGTATTCCTTGAatcacatcac                                                 >  1:638032/1‑100 (MQ=255)                                                 gTCACAAAGTCCTTCGTCAGGATTAATCCATCAAATAATGCCTGATAGCACATATCAGGCGTTGTCCTCACTTCTTTTTGTATTCCTTGAatcacatcac                                                 >  1:544700/1‑100 (MQ=255)                                                   cacaAAGTCCTTCGTCAGGATTAATCCATCAAATAATGCCTGATAGCACATATCAGGCGTTGTCCTCACTTCTTTTTGTATTCCTTGAATCACATCACaa                                               <  1:787241/100‑1 (MQ=255)                                                     caAAGTCCTTCGTCAGGATTAATCCATCAAATAATGCCTGATAGCACATATCAGGCGTTGTCCTCACTTCTTTTTGTATTCCTTGAATCACATCACaaaa                                             >  1:656323/1‑100 (MQ=255)                                                       aaGTCCTTCGTCAGGATTAATCCATCAAATAATGCCTGATAGCACATATCAGGCGTTGTCCTCACTTCTTTTTGTATTCCTTGAATCACATCACAAAATa                                           <  2:1067356/100‑1 (MQ=255)                                                          tCCTTCGTCAGGATTAATCCATCAAATAATGCCTGATAGCACATATCAGGCGTTGTCCTCACTTCTTTTTGTATTCCTTGAATCACATCACAAAATAGAc                                        <  1:945892/100‑1 (MQ=255)                                                          tCCTTCGTCAGGATTAATCCATCAAATAATGCCTGATAGCACATATCAGGCGTTGTCCTCACTTCTTTTTGTATTCCTTGAATCACATCACAAAATAGAc                                        <  1:1066105/100‑1 (MQ=255)                                                           ccTTCGTCAGGATTAATCCATCAAATAATGCCTGATAGCACATATCAGGCGTTGTCCTCACTTCTTTTTGTATTCCTTGAATCACATCACAAAATAGACa                                       <  1:927030/100‑1 (MQ=255)                                                            cTTCGTCAGGATTAATCCATCAAATAATGCCTGATAGCACATATCAGGCGTTGTCCTCACTTCTTTTTGTATTCCTTGAATCACATCACAAAATAGACaa                                      >  1:287153/1‑100 (MQ=255)                                                             ttCGTCAGGATTAATCCATCAAATAATGCCTGATAGCACATATCAGGCGTTGTCCTCACTTCTTTTTGTATTCCTTGAATCACATCACAAAATAGACaaa                                     <  2:883313/100‑1 (MQ=255)                                                             ttCGTCAGGATTAATCCATCAAATAATGCCTGATAGCACATATCAGGCGTTGTCCTCACTTCTTTTTGTATTCCTTGAATCACATCACAAAATAGACaaa                                     >  1:133974/1‑100 (MQ=255)                                                                  cAGGATTAATCCATCAAATAATGCCTGATAGCACATATCAGGCGTTGTCCTCACTTCTTTTTGTATTCCTTGAATCACATCACAAAATAGACAAATCTCa                                <  2:1163747/100‑1 (MQ=255)                                                                  cAGGATTAATCCATCAAATAATGCCTGATAGCACATATCAGGCGTTGTCCTCACTTCTTTTTGTATTCCTTGAATCACATCACAAAATAGACAAATCTCa                                >  2:177234/1‑100 (MQ=255)                                                                     gATTAATCCATCAAATAATGCCTGATAGCACATATCAGGCGTTGTCCTCACTTCTTTTTGTATTCCTTGAATCACATCACAAAATAGACAAATCTCAggc                             <  1:900665/100‑1 (MQ=255)                                                                        tAATCCATCAAATAATGCCTGATAGCACATATCAGGCGTTGTCCTCACTTCTTTTTGTATTCCTTGAATCACATCACAAAATAGACAAATCTCAggcggc                          <  2:534105/100‑1 (MQ=255)                                                                           tCCATCAAATAATGCCTGATAGCACATATCAGGCGTTGTCCTCACTTCTTTTTGTATTCCTTGAATCACATCACAAAATAGACAAATCTCAGGCGGCaaa                       >  2:191708/1‑100 (MQ=255)                                                                              aTCAAATAATGCCTGATAGCACATATCAGGCGTTGTCCTCACTTCTTTTTGTATTCCTTGAATCACATCACAAAATAGACAAATCTCAGGCGGCaaaaaa                    >  1:615104/1‑100 (MQ=255)                                                                               tCAAATAATGCCTGATAGCACATATCAGGCGTTGTCCTCACTTCTTTTTGTATTCCTTGAATCACATCACAAAATAGACAAATCTCAGGCGGCAAAAAac                   <  1:382282/100‑1 (MQ=255)                                                                               tCAAATAATGCCTGATAGCACATATCAGGCGTTGTCCTCACTTCTTTTTGTATTCCTTGAATCACATCACAAAATAGACAAATCTCAGGCGGCAAAAAac                   >  2:978610/1‑100 (MQ=255)                                                                                cAAATAATGCCTGATAGCACATATCAGGCGTTGTCCTCACTTCTTTTTGTATTCCTTGAATCACATCACAAAATAGACAAATCTCAGGCGGCAAAAAacg                  >  2:262102/1‑100 (MQ=255)                                                                                 aaaTAATGCCTGATAGCACATATCAGGCGTTGTCCTCACTTCTTTTTGTATTCCTTGAATCACATCACAAAATAGACAAATCTCAGGCGGCAAAAAacga                 >  2:181886/1‑100 (MQ=255)                                                                                      atGCCTGATAGCACATATCAGGCGTTGTCCTCACTTCTTTTTGTATTCCTTGAATCACATCACAAAATAGACAAATCTCAGGCGGCAAAAAACGACGTCt            >  1:444538/1‑100 (MQ=255)                                                                                        gCCTGATAGCACATATCAGGCGTTGTCCTCACTTCTTTTTGTATTCCTTGAATCACATCACAAAATAGACAAATCTCAGGCGGCAAAAAACGACGTCTGa          >  2:589743/1‑100 (MQ=255)                                                                                        gCCTGATAGCACATATCAGGCGTTGTCCTCACTTCTTTTTGTATTCCTTGAATCACATCACAAAATAGACAAATCTCAGGCGGCAAAAAACGACGTCTGa          >  2:1261200/1‑100 (MQ=255)                                                                                         ccTGATAGCACATATCAGGCGTTGTCCTCACTTCTTTTTGTATTCCTTGAATCACATCACAAAATAGACAAATCTCAGGCGGCAAAAAACGACGTCTGaa         <  1:506675/100‑1 (MQ=255)                                                                                                gCACATATCAGGCGTTGTCCTCACTTCTTTTTGTATTCCTTGAATCACATCACAAAATAGACAAATCTCAGGCGGCAAAAAACGACGTCTGAATGCAttt  >  1:74801/1‑100 (MQ=255)                                                                                                gCACATATCAGGCGTTGTCCTCACTTCTTTTTGTATTCCTTGAATCACATCACAAAATAGACAAATCTCAGGCGGCAAAAAACGACGTCTGAATGCAt    >  2:1136108/1‑98 (MQ=255)                                                                                                    |                                                                                                CTGAAAGCCGCATGATGCGTAAAGTCACTGATGCGTTACTCGATTATGGTCACAAAGTCCTTCGTCAGGATTAATCCATCAAATAATGCCTGATAGCACATATCAGGCGTTGTCCTCACTTCTTTTTGTATTCCTTGAATCACATCACAAAATAGACAAATCTCAGGCGGCAAAAAACGACGTCTGAATGCATTT  >  NC_000913/3060573‑3060767

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.