| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 4,479,551 | A→G | intergenic (‑14/‑179) | yjgM ← / → yjgN | GNAT family putative N‑acetyltransferase/DUF898 family inner membrane protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,479,551 | 0 | A | G | 87.9% | 159.4 / 7.0 | 58 | intergenic (‑14/‑179) | yjgM/yjgN | GNAT family putative N‑acetyltransferase/DUF898 family inner membrane protein |
| Reads supporting (aligned to +/- strand): ref base A (3/4); new base G (26/25); total (29/29) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
CCTGACGAATGACGCGGGCGATAGCAGGATTATCCTGCAGCGTCAGGCGACGCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCAATAAAAATAAAGTAATTATACATTTGTTTAATACCACTCTCTTCTTACGTACGCAAGCGACTTATAAAGTAATAAAGTTTTTGCCAGCCTATTACTGA > NC_000913/4479453‑4479646 | ccTGACGAATGACGCGGGCGATAGCAGGATTATCCTGCAGCGTCAGGCGACGCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCaataa > 1:571679/1‑100 (MQ=255) cTGACGAATGACGCGGGCGATAGCAGGATTATCCTGCAGCGTCAGGCGACGCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCaatgaa < 2:819547/100‑1 (MQ=255) tGACGAATGACGCGGGCGATAGCAGGATTATCCTGCAGCGTCAGGCGACGCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCaatgaaa > 2:1292047/1‑100 (MQ=255) gAATGACGCGGGCGATAGCAGGATTATCCTGCAGCGTCAGGCGACGCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCaatgaaaataa < 2:367904/100‑1 (MQ=255) aTGACGCGGGCGATAGCAGGATTATCCTGCAGCGTCAGGCGACGCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCAATGAAAATAAAg > 1:1136409/1‑100 (MQ=255) aTGACGCGGGCGATAGCAGGATTATCCTGCAGCGTCAGGCGACGCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCAATAAAAATAAAg < 1:197092/100‑1 (MQ=255) cgcgGGCGATAGCAGGATTATCCTGCAGCGTCAGGCGACGCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCAATGAAAATAAAGTAAt > 2:205037/1‑100 (MQ=255) gggCGATAGCAGGATTATCGTGCAGCGTCAGGCGACGCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCAATGAAAATAAAGTAATta < 2:348022/99‑1 (MQ=255) ggCGATAGCAGGATTATCCTGCAGCGTCAGGCGACGCATTACAGGTGATTGCAGCGCAATGTTATTCATAGTTTAACCCAATGAAAATAAAGTAATtata < 2:608382/100‑1 (MQ=255) aTAGCAGGATTATCCTGCAGCGTCAGGCGACGCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCAATGAAAATAAAGTAATTATACAtt < 1:544444/100‑1 (MQ=255) naGCAGGATTATCCTGCAGCATCAGGCGACGCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCAATGAAAATAAAGTAATTATACAttt > 2:795704/2‑100 (MQ=255) gCAGGATTATCCTGCAGCGTCAGGCGACGCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCAATGAAAATAAAGTAATTATACATTTGt > 1:1055316/1‑100 (MQ=255) cAGGATTATCCTGCAGCGTCAGGCGACGCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCAATGAAAATAAAGTAATTATACATTTGtt > 1:273145/1‑100 (MQ=255) cAGGATTATCCTGCAGCGTCAGGCGACGCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCAATGAAAATAAAGTAATTATACATTTGtt > 2:1199977/1‑100 (MQ=255) cAGGAGTATCCTGCAGCGTCAGGCGACGCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCAATGAAAATAAAGTAATTATACATTTGtt < 1:759569/100‑1 (MQ=255) aGGATTATCCTGCAGCGTCAGGCGACGCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCAATGAAAATAAAGTAATTATACATTTGttt < 1:1160159/100‑1 (MQ=255) aGGATTATCCTGCAGCGTCAGGCGACGCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCAATGAAAATAAAGTAATTATACATTTGttt < 1:1076731/100‑1 (MQ=255) aTCCTGCAGCGTCAGGCGACGCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCAATGAAAATAAAGTAATTATACATTTGTTTAATAcc < 2:460649/100‑1 (MQ=255) ccTGCAGCGTCAGGCGACGCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCAATGAAAATAAAGTAATTATACATTTGTTTAATACCAc < 1:346845/100‑1 (MQ=255) ccTGCAGCGTCAGGCGACGCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCAATGAAAATAAAGTAATTATACATTTGTTTAATACCAc > 1:175479/1‑100 (MQ=255) tGCAGCGTCAGGCGACGCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCAATGAAAATAAAGTAATTATACATTTGTTTAATACCActc < 1:662021/100‑1 (MQ=255) cAGCGTCAGGCGACGCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCAATGAAAATAAAGTAATTATACATTTGTTTAATACCActctc > 1:812309/1‑100 (MQ=255) aGCGTCAGGCGACGCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCAATAAAAATAAAGTAATTATACATTTGTTTAATACCActctct > 1:930391/1‑100 (MQ=255) aGCGTCAGGCGACGCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCAATAAAAATAAAGTAATTATACATTTGTTTAATACCActctct < 1:739892/100‑1 (MQ=255) gCGTCAGGCGACGCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCAATGAAAATAAAGTAATTATACATTTGTTTAATACCACTCtctt > 1:13174/1‑100 (MQ=255) cGTCAGGCGACGCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCAATGAAAATAAAGTAATTATACATTTGTTTAATACCACTCtcttc < 1:745195/100‑1 (MQ=255) gTCAGGCGACGCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCAATGAAAATAAAGTAATTATACATTTGTTTAATACCACTCtcttct > 1:647042/1‑100 (MQ=255) gTCAGGCGACGCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCAATGAAAATAAAGTAATTATACATTTGTTTAATACCACTCtcttct > 1:189712/1‑100 (MQ=255) tCAGGCGACGCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCAATGAAAATAAAGTAATTATACATTTGTTTAATACCACTCTcttctt < 2:473710/100‑1 (MQ=255) cAGGCGACGCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCAATGAAAATAAAGTAATTATACATTTGTTTAATACCACTCTCTTCTta < 2:998130/100‑1 (MQ=255) cAGGCGACGCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCAATGAAAATAAAGTAATTATACATTTGTTTAATACCACTCTCTTCTta > 2:496929/1‑100 (MQ=255) aGGCGACGCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCAATGAAAATAAAGTAATTATACATTTGTTTAATACCACTCTCTTCTtac > 1:178522/1‑100 (MQ=255) cGACGCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCAATAAAAATAAAGTAATTATACATTTGTTTAATACCACTCTCTTCTtacgta > 1:464293/1‑100 (MQ=255) cATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCAATGAAAATAAAGTAATTATACATTTGTTTAATACCACTCTCTTCTTACGTACGCaa > 1:383645/1‑100 (MQ=255) ttACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCAATGAAAATAAAGTAATTATACATTTGTTTAATACCACTCTCTTCTTACGTACGCAAGc > 1:640954/1‑100 (MQ=255) tACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCAATGAAAATAAAGTAATTATACATTTGTTTAATACCACTCTCTTCTTACGTACGCAAGcn < 1:795709/100‑2 (MQ=255) cAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCAATGAAAATAAAGTAATTATACATTTGTTTAATACCACTCTCTTCTTACGTACGCAAGCGAc > 2:828601/1‑100 (MQ=255) gTGATTGCGGCGCAATGTTATTCATAGTTTAACCCAATGAAAATAAAGTAATTATACATTTGTTTAATACCACTCTCTTCTTACGTACGCAAGCGACTta < 1:176298/100‑1 (MQ=255) tGATTGCGGCGCAATGTTATTCATAGTTTAACCCAATGAAAATAAAGTAATTATACATTTGTTTAATACCACTCTCTTCTTACGTACGCAAGCGACTtat > 2:1208512/1‑100 (MQ=255) gcggcgCAATGTTATTCATAGTTTAACCCAATGAAAATAAAGTAATTATACATTTGTTTAATACCACTCTCTTCTTACGTACGCAAGCGACTTATAAAGt < 1:630525/100‑1 (MQ=255) cggcgCAATGTTATTCATAGTTTAACCCAATAAAAATAAAGTAATTATACATTTGTTTAATACCACTCTCTTCTTACGTACGCAAGCGACTTATAAAGta > 2:813995/1‑100 (MQ=255) gcAATGTTATTCATAGTTTAACCCAATGAAAATAAAGTAATTATACATTTGTTTAATACCACTCTCTTCTTACGTACTCAAGCGACTTATAAAGtaataa < 2:759086/100‑1 (MQ=255) gcAATGTTATTCATAGTTTAACCCAATGAAAATAAAGTAATTATACATTTGTTTAATACCACTCTCTTCTTACGTACGCAAGCGACTTATAAAGtaataa > 1:629904/1‑100 (MQ=255) gcAATGTTATTCATAGTTTAACCCAATGAAAATAAAGTAATTATACATTTGTTTAATACCACTCTCTTCTTACGTACGCAAGCGACTTATAAAGtaataa < 1:96733/100‑1 (MQ=255) gcAATGTTATTCATAGTTTAACCCAATGAAAATAAAGTAATTATACATTTGTTTAATACCACTCTCTTCTTACGTACGCAAGCGACTTATAAAGtaataa > 1:101485/1‑100 (MQ=255) aaTGTTATTCATAGTTTAACCCAATGAAAATAAAGTAATTAGACATTTGTTTAATACCACTCTCTTCTTACGTACGCAAGCGACTTATAAAGTAATAAAg > 2:714560/1‑100 (MQ=255) aaTGTTATTCATAGTTTAACCAAATAAAAATAAAGTAATTATACATTTCTTTAATACCACTCTCCTCTTACGTACGCAAGCGACTTATAAAGt < 2:188787/93‑1 (MQ=255) gTTATTCATAGTTTAACCCAATGAAAATAAAGTAATTATACATTTGTTTAATACCACTCTCTTCTTACGTACGCAAGCGACTTATAAAGTAATAAAGttt < 2:869381/100‑1 (MQ=255) gTTATTCATAGTTTAACCCAATGAAAATAAAGTAATTATACATTTGTTTAATACCACTCTCTTCTTACGTACGCAAGCGACTTATAAAGTAATAAAGttt < 2:1158027/100‑1 (MQ=255) tCATAGTTTAACCCAATGAAAATAAAGTAATTATACATTTGTTTAATACCACTCTCTTCTTACGTACGCAAGCGACTTATAAAGTAATAAAGTTTTTGcc < 2:129701/100‑1 (MQ=255) tCATAGTTTAACCCAATGAAAATAAAGTAATTATACATTTGTTTAATACCACTCTCTTCTTACGTACGCAAGCGACTTATAAAGTAATAAAGTTTTTGcc < 2:998291/100‑1 (MQ=255) cATAGTTTAACCCAATGAAAATAAAGTAATTATACATTTGTTTAATACCACTCTCTTCTTACGTACGCAAGCGACTTATAAAGTAATAAAGTTTTTGCCa > 1:819521/1‑100 (MQ=255) cATAGTTTAACCCAATGAAAATAAAGTAATTATACATTTGTTTAATACCACTCTCTTCTTACGTACGCAAGCGACTTATAAAGTAATAAAGTTTTTGCCa > 1:618268/1‑100 (MQ=255) aTAGTTTAACCCAATGAAAATAAAGTAATTATACATTTGTTTAATACCACTCTCTTCTTACGTACGCAAGCGACTTATAAAGTAATAAAGTTTTTGCCAg > 2:783766/1‑100 (MQ=255) aTAGTTTAACCCAATAAAAATAAAGTAATTATACATTTGTTTAATACCACTCTCGTCTTACGTACGCAAGCGACTTATAAAGTAATAAAGTTTTTGcc < 2:519141/98‑1 (MQ=255) gTTTAACCCAATGAAAATAAAGTAATTATACATTTGTTTAATACCACTCTCTTCTTACGTACGCAAGCGACTTATAAAGTAATAAAGTTTTTGCCAGCCt > 1:799450/1‑100 (MQ=255) tAACCCAATGAAAATAAAGTAATTATACATTTGTTTAATACCACTCTCTTCTTACGTACGCAAGCGACTTATAAAGTAATAAAGTTTTTGCCAGCCTAtt < 2:1090287/100‑1 (MQ=255) tAACCCAATGAAAATAAAGTAATTATACATTTGTTTAATACCACTCTCTTCTTACGTACGCAAGCGACTTATAAAGTAATAAAGTTTTTGCCAGCCTAtt < 1:783771/100‑1 (MQ=255) aCCCAATGAAAATAAAGTAATTATACATTTGTTTAATACCACTCTCTTCTTACGTACGCAAGCGACTTATAAAGTAATAAAGTTTTTGCCAGCCTATTAc > 2:532269/1‑100 (MQ=255) cccAATGAAAATAAAGTAATTATACATTTGTTTAATACCACTCTCTTCTTACGTACGCAAGCGACTTATAAAGTAATAAAGTTTTTGCCAGCCTATTACt < 2:501212/100‑1 (MQ=255) ccAATGAAAATAAAGTAATTATACATTTGTTTAATACCACTCTCTTCTTACGTACGCAAGGGACTTATAAAGTAATAAAGTTTTTGCCAGCCTATTACt < 2:802419/99‑1 (MQ=255) cAATGAAAATAAAGTAATTATACATTTGTTTAATACCACTCTCTTCTTACGTACGCAAGCGACTTATAAAGTAATAAAGTTTTTGCCAGCCTATTACTGa > 2:1126367/1‑100 (MQ=255) | CCTGACGAATGACGCGGGCGATAGCAGGATTATCCTGCAGCGTCAGGCGACGCATTACAGGTGATTGCGGCGCAATGTTATTCATAGTTTAACCCAATAAAAATAAAGTAATTATACATTTGTTTAATACCACTCTCTTCTTACGTACGCAAGCGACTTATAAAGTAATAAAGTTTTTGCCAGCCTATTACTGA > NC_000913/4479453‑4479646 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |