| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 106,554 | A→G | intergenic (+98/‑3) | ftsZ → / → lpxC | GTP‑binding tubulin‑like cell division protein/UDP‑3‑O‑acyl N‑acetylglucosamine deacetylase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 106,554 | 0 | A | G | 94.8% | 186.9 / ‑1.8 | 58 | intergenic (+98/‑3) | ftsZ/lpxC | GTP‑binding tubulin‑like cell division protein/UDP‑3‑O‑acyl N‑acetylglucosamine deacetylase |
| Reads supporting (aligned to +/- strand): ref base A (1/2); new base G (21/34); total (22/36) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
AATTGACTGGAATTTGGGTTTCGAGGCTCTTTGTGCTAAACTGGCCCGCCGAATGTATAGTACACTTCGGTTGGATAGGTAATTTGGCGAGATAATACGATGATCAAACAAAGGACACTTAAACGTATCGTTCAGGCGACGGGTGTCGGTTTACATACCGGCAAGAAAGTCACCCTGACGTTACGCCCTGCG > NC_000913/106458‑106649 | aaTTGACTGGAATTTGGGTTTCGAGGCTCTTTGTGCTAAACTGGCCCGCCGAATGTATAGTACACTTCGGTTGGATAGGTAATTTGGCGAGATAATGCga > 1:326312/1‑100 (MQ=255) aTTGACTGGAATTTGGGTTTCGAGGCTCTTTGTGCTAAACTGGCCCGCCGAATGTATAGTACACTTCGGTTGGATAGGTAATTTGGCGAGATAATGCgat < 1:800070/100‑1 (MQ=255) gACTGGAATTTGGGTTTCGAGGCTCTTTGTGCTAAACTGGCCCGCCGAATGTATAGTACACTTCGGTTGGATAGGTAATTTGGCGAGATAATGCgatgat > 2:535940/1‑100 (MQ=255) aCTGGAATTTGGGTTTCGAGGCTCTTTGTGCTAAACTGGCCCGCCGAATGTATAGTACACTTCGGTTGGATAGGTAATTTGGCGAGATAATGCGATGATc < 1:699620/100‑1 (MQ=255) cTGGAATTTGGGTTTCGCGACTCTTTGTGCTAAACCGGCCTGCAAAATGTATAGTACACTTCGGCTGGAGAGGTCACTTGGCGAGATGATACgaaga > 2:583993/1‑97 (MQ=255) tGGAATTTGGGTTTCGAGGCTCTTTGTGCTAAACTGGCCCGCCGAATGTATAGTACACTTCGGTTGGATAGGTAATTTGGCGAGATAATGCGATGATcaa < 1:220666/100‑1 (MQ=255) ggAATTTGGGTTTCGAGGCTCTTTGTGCTAAACTGGCCCGCCGAATGTATAGTACACTTCGGTTGGATAGGTAATTTGGCGAGATAATGCGATGATcaaa > 2:382843/1‑100 (MQ=255) aaTTTGGGTTTCGAGGCTCTTTGTGCTAAACTGGCCCGCCGAATGTATAGTACACTTCGGTTGGATAGGTAATTTGGCGAGATAATGCGATGATcaaaca < 2:402212/100‑1 (MQ=255) aTTTGGGTTTCGAGGCTCTTTGTGCTAAACTGGCCCGCCGAATGTATAGTACACTTCGGTTGGATAGGTAATTTGGCGAGATAATGCGATGATcaaacaa < 2:967850/100‑1 (MQ=255) aTTTGGGTTTCGAGGCTCTTTGTGCTAAACTGGCCCGCCGAATGTATAGTACACTTCGGTTGGATAGGTAATTTGGCGAGATAATGCGATGATcaaacaa > 1:553864/1‑100 (MQ=255) aTTTGGGTTTCGAGGCTCTTTGTGCTAAACTGGCCCGACGCATGTATAGTACACTTCGGTTGGATAGGTAATTTGGCGAGATAATGCGATGATccaa < 2:1170969/97‑1 (MQ=255) gTTTCGAGGCTCTTTGTGCTAAACTGGCCCGCCGAATGTATAGTACACTTCGGTTGGATAGGTAATTTGGCGAGATAATGCGATGATCAAACAAAGGaca > 2:636791/1‑100 (MQ=255) gTTTCGAGGCTCTTTGTGCTAAACTGGCCCGCCGAATGTATAGTACACTTCGGTTGGATAGGTAATTTGGCGAGATAATGCGATGATCAAACAAAGGaca < 2:283383/100‑1 (MQ=255) ttCGAGGCTCTTTGTGCTAAACTGGCCCGCCGAATGTATAGTACACTTCGGTTGGATAGGTAATTTGGCGAGATAATACGATGATCAAACAAAGGACACt < 2:853377/100‑1 (MQ=255) ggCTCTTTGTGCTAAACTGGCCCGCCGAATGTATAGTACACTTCGGTTGGATAGGTAATTTGGCGAGATAATGCGATGATCAAACAAAGGACACTTAAAc > 1:339290/1‑100 (MQ=255) ctTTGTGCTAAACTGGCCCGCCGAATGTATAGTACACTTCGGTTGGATAGGTAATTTGGCGAGATAATGCGATGATCAAACAAAGGACACTTAAACGTAt < 1:1147064/100‑1 (MQ=255) tgtgCTAAACTGGCCCGCCGAATGTATAGTACACTTCGGTTGGATAGGTAATTTGGCGAGATAATGCGATGATCAAACAAAGGACACTTAAACGTATCGt < 1:977662/100‑1 (MQ=255) tgCTAAACTGGCCCGCCGAATGTATAGTACACTTCGGTTGGATAGGTAATTTGGCGAGATAATGCGATGATCAAACAAAGGACACTTAAACGTATCGTTc > 2:1215512/1‑100 (MQ=255) cTAAACTGGCCCGCCGAATGTATAGTACACTTCGGTTGGATAGGTAATTTGGCGAGATAATGCGATGATCAAACAAAGGACACTTATACGTATCGTTctg < 1:879432/100‑3 (MQ=255) tAAACTGGCCCGCCGAATGTATAGTACACTTCGGTTGGATAGGTAATTTGGCGAGATAATGCGATGATCAAACAAAGGACACTTAAACGTATCGTTCAgg > 2:198307/1‑100 (MQ=255) aaaCTGGCCCGCCTAATGTATAGTACACTTCGGTTGGATAGGTAATTTGGCGAGATAATGCGATGATCAAACAAAGGACACTTAAACGTATCGTTCAGGc < 2:136685/100‑1 (MQ=255) aaaCTGGCCCGCCGAATGTATAGTACACTTCGGTTGGATAGGTAATTTGGCGAGATAATGCGATGATCAAACAAAGGACACTTAAACGTATCGTTCAGGc > 1:886601/1‑100 (MQ=255) gCCCGCCGAATGTATAGTACACTTCGGTTGGATAGGTAATTTGGCGAGATAATGCGATGATCAAACAAAGGACACTTAAACGTATCGTTCAGGCGACggg < 2:326309/100‑1 (MQ=255) cgAATGTATAGTACACTTCGGTTGGATAGGTAATTTGGCGAGATAATGCGATGATCAAACAAAGGACACTTAAACGTATCGTTCAGGCGACGGGTGTCgg > 2:1286560/1‑100 (MQ=255) aTGTATAGTACACTTCGGTTGGATAGGTAATTTGGCGAGATAATGCGATGATCAAACAAAGGACACTTAAACGTATCGTTCAGGCGACGGGTGTCGGttt < 2:394026/100‑1 (MQ=255) aTGTATAGTACACTTCGGTTGGATAGGTAATTTGGCGAGATAATGCGATGATCAAACAAAGGACACTTAAACGTATCGTTCAGGCGACGGGTGTCGGttt < 2:593840/100‑1 (MQ=255) aTGTATAGTACACTTCGGTTGGATAGGTAATTTGGCGAGATAATGCGATGATCAAACAAAGGACACTTAAACGTATCGTTCAGGCGACGGGTGTCGGttt < 2:624087/100‑1 (MQ=255) tGTATAGTACACTTCGGTTGGATAGGTAATTTGGCGAGATAATGCGATGATCAAACAAAGGACACTTAAACGTATCGTTCAGGCGACGGGTGTCGGTTTa < 2:166502/100‑1 (MQ=255) tGTATAGTACACTTCGGTTGGATAGGTAATTTGGCGAGATAATGCGATGATCAAACAAAGGACACTTAAACGTATCGTTCAGGCGACGGGTGTCGGTTTa < 2:1130344/100‑1 (MQ=255) tGTATAGTACACTTCGGTTGGATAGGTAATTTGGCGAGATAATGCGATGATCAAACAAAGGACACTTAAACGTATCGTTCAGGCGACGGGTGTCGGTTTa < 1:116029/100‑1 (MQ=255) gTATAGTACACTTCGGTTGGATAGGTAATTTGGCGAGATAATGCGATGATCAAACAAAGGACACTTAAACGTATCGTTCAGGCGACGGGTGTCGGTTTAc < 1:1247100/100‑1 (MQ=255) gTATAGTACACTTCGGTTGGATAGGTAATTTGGCGAGATAATGCGATGATCAAACAAAGGACACTTAAACGTATCGTTCAGGCGACGGGTGTCGGTTTAc < 1:35386/100‑1 (MQ=255) tataGTACACTTCGGTTGGATAGGTAATTTGGCGAGATAATGCGATGATCAAACAAAGGACACTTAAACGTATCGTTCAGGCGACGGGTGTCGGTTTACa > 1:597267/1‑100 (MQ=255) gTACACTTCGGTTGGATAGGTAATTTGGCGAGATAATGCGATGATCAAACAAAGGACACTTAAACGTATCGTTCAGGCGACGGGTGTCGGTTTACATAcc > 2:796842/1‑100 (MQ=255) acacTTCGGTTGGATAGGTAATTTGGCGAGATAATGCGATGATCAAACAAAGGACACTTAAACGTATCGTTCAGGCGACGGGTGTCGGTTTACATACCgg < 2:1290159/100‑1 (MQ=255) acTTCGGTTGGATAGGTAATTTGGCGAGATAATGCGATGATCAAACAAAGGACACTTAAACGTATCGTTCAGGCGACGGGTGTCGGTTTACATACCGGCa < 1:648229/100‑1 (MQ=255) cTTCGGTTGGATAGGTAATTTGGCGAGATAATGCGATGATCAAACAAAGGACACTTAAACGTATCGTTCAGGCGACGGGTGTCGGTTTACATACCgg > 2:222355/1‑97 (MQ=255) cTTCGGTTGGATAGGTAATTTGGCGAGATAATGCGATGATCAAACAAAGGACACTTAAACGTATCGTTCAGGCGACGGGTGTCGGTTTACATACCGGCaa > 1:1168429/1‑100 (MQ=255) cTTCGGTTGGATAGGTAATTTGGCGAGATAATGCGATGATCAAACAAAGGACACTTAAACGTATCGTTCAGGCGACGGGTGTCGGTTTACATACCGGCaa > 1:1148683/1‑100 (MQ=255) cTTCGGTTGGATAGGTAATTTGGCGAGATAATGCGATGATCAAACAAAGGACACTTAAACGTATCGTTCAGGCGACGGGTGTCGGTTTACATACCGGCaa < 2:228894/100‑1 (MQ=255) ttCGGTTGGATAGGTAATTTGGCGAGATAATGCGATGATCAAACAAAGGACACTTAAACGTATCGTTCAGGCGACGGGTGTCGGTTTACATACCGGCAAg < 1:1196646/100‑1 (MQ=255) tCGGTTGGATAGGTAATTTGGCGAGATAATACGATGATCAAACAAAGGACACTTAAACGTATCGTTCAGGCGACGGGTGTCGGTTTACATACCGGCAAGa < 2:883154/100‑1 (MQ=255) cGGTTGGATAGGTAATTTGGCGAGATAATGCGATGATCAAACAAAGGACACTTAAACGTATCGTTCAGGCGACGGGTGTCGGTTTACATACCGGCAAGaa < 1:469090/100‑1 (MQ=255) gTTGGATAGGTAATTTGGCGAGATAATGCGATGATCAAACAAAGGACACTTAAACGTATCGTTCAGGCGACGGGTGTCGGTTTACATACCGGCAAGAAAg < 2:1016687/100‑1 (MQ=255) aTAGGTAATTTGGCGAGATAATGCGATGATCAAACAAAGGACACTTAAACGTATCGTTCAGGCGACGGGTGTCGGTTTACATACCGGCAAGAAAGTCAcc < 1:535944/100‑1 (MQ=255) ggTAATTTGGCGAGATAATGCGATGATCAAACAAAGGACACTTCAACGTATCGTTCAGGCGACGGGTGTCGGTTTACATACCGGCAAGAAAGTCACCCTg < 2:835022/100‑1 (MQ=255) ggTAATTTGGCGAGATAATGCGATGATCAAACAAAGGACACTTAAACGTATCGTTCAGGCGACGGGTGTCGGTTTACATACCGGCAAGAAAGTCACCCTg > 2:1162149/1‑100 (MQ=255) ggTAATTTGGCGAGATAATGCGATGATCAAACAAAGGACACTTAAACGTATCGTTCAGGCGACGGGTGTCGGTTTACATACCGGCAAGAAAGTCACCCTg < 1:200725/100‑1 (MQ=255) ggTAATTTGGCGAGATAATGCGATGATCAAACAAAGGACACTTAAACGTATCGTTCAGGCGACGGGTGTCGGTTTACATACCGGCAAGAAAGTCACCCTg < 2:880415/100‑1 (MQ=255) ggTAATTTGGCGAGATAATGCGATGATCAAACAAAGGACACTTAAACGTATCGTTCAGGCGACGGGTGTCGGTTTACATACCGGCAAGAAAGTCACCCTg > 1:1049460/1‑100 (MQ=255) aaTTTGGCGAGATAATGCGATGATCAAACAAAGGACACTTAAACGTATCGTTCAGGCGACGGGTGTCGGTTTACATACCGGCAAGAAAGTCACCCTGACg > 1:151831/1‑100 (MQ=255) gCGAGATAATGCGATGATCAAACAAAGGACACTTAAACGTATCGTTCAGGCGACGGGTGTCGGTTTACATACCGGCAAGAAAGTCACCCTGACGTTACGc < 2:163352/100‑1 (MQ=255) cGAGATAATGCGATGATCAAACAAAGGACACTTAAACGTATCGTTCAGGCGACGGGTGTCGGTTTACATACCGGCAAGAAAGTCACCCTGACGTTACGcc < 1:174115/100‑1 (MQ=255) cGAGATAATGCGATGATCAAACAAAGGACACTTAAACGTATCGTTCAGGCGACGGGTGTCGGTTTACATACCGGCAAGAAAGTCACCCTGACGTTACGcc < 1:198309/100‑1 (MQ=255) cGAGATAATGCGATGATCAAACAAAGGACACTTAAACGTATCGTTCAGGCGACGGGTGTCGGTTTACATAACGGCAAGAAAGTCACCCTGACGTTACGcc > 2:508981/1‑100 (MQ=255) gagaTAATGCGATGATCAAACAAAGGACACTTAAACGTATCGTTCAGGCGACGGGTGTCGGTTTACATACCGGCAAGAAAGTCACCCTGACGTTACGccc < 2:493410/100‑1 (MQ=255) agaTAATGCGATGATCAAACAAAGGACACTTAAACGTATCGTTCAGGCGACGGGTGTCGGTTTACATACCGGCAAGAAAGTCACCCTGACGTTACGCCCt > 2:75669/1‑100 (MQ=255) gaTAATGCGATGATCAAACAAAGGACACTTAAACGTATCGTTCAGGCGACGGGTGTCGGTTTACATACCGGCAAGAAAGTCACCCTGACGTTACGCCCTg > 2:997405/1‑100 (MQ=255) taatgCGATGATCAAACAAAGGACACTTAAACGTATCGTTCAGGCGACGGGTGTCGGTTTACATACCGGCAAGAAAGTCACCCTGACGTTACGCCCTgcg > 1:380473/1‑100 (MQ=255) | AATTGACTGGAATTTGGGTTTCGAGGCTCTTTGTGCTAAACTGGCCCGCCGAATGTATAGTACACTTCGGTTGGATAGGTAATTTGGCGAGATAATACGATGATCAAACAAAGGACACTTAAACGTATCGTTCAGGCGACGGGTGTCGGTTTACATACCGGCAAGAAAGTCACCCTGACGTTACGCCCTGCG > NC_000913/106458‑106649 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |