Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 2,076,841 G→A A9T (GCC→ACC)  yeeT → CP4‑44 prophage; uncharacterized protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,076,8410GA100.0% 169.3 / NA 49A9T (GCC→ACC) yeeTCP4‑44 prophage; uncharacterized protein
Reads supporting (aligned to +/- strand):  ref base G (0/0);  new base A (29/20);  total (29/20)

GCTTTAACCCTTCACAACCACATCACACCTGTTTTCACTTTTATCTTCTGTCTTCAGAGGTATCCCATTATGAAAATTATCACCCGTGGTGAAGCCATGCGTATTCACCAACAACATCCGACATCCCGTCTTTTTCCGTTCTGTACCGGTAAATACCGCTGGCACGGCAGTGCTGAAGCGTATACCGGT  >  NC_000913/2076748‑2076936
                                                                                             |                                                                                               
gCTTTATCCCTTCGCAACCGCATCACACCCGTTTTCACTTTTATCTTCTGTCTTCAGAGGTATCCCATTATGAAAATTATCACCCGTGGTGAAACCATg                                                                                            <  2:1207391/99‑1 (MQ=255)
gCTTTAACCCTTCACAACCACATCACACCTGTTTTCACTTTTATCTTCTGTCTTCAGAGGTATTCCCTTATGACAATTATCACCCTTGGTGAAACCATGc                                                                                           >  1:562630/1‑100 (MQ=255)
 cTTTAACCCTTCACAACCACATCACACCTGTTTTCACTTTTATCTTCTGTCTTCAGAGGTATCCCATTATGAAAATTATCACCCGTGGTGAAACCATGCg                                                                                          >  2:1238370/1‑100 (MQ=255)
 cTTTAACCCTTCACAACCACATCACACCTGTTTTCACTTTTATCTTCTGTCTTCAGAGGTATCCCATTATGAAAATTATCACCCGTGGTGAAACCATGCg                                                                                          <  2:1164933/100‑1 (MQ=255)
 cTTTAACCCTTCACAACCACATCACACCTGTTTTCACTTTTATCTTCTGTCTTCAGAGGTATCCCATTATGAAAATTATCACCCGTGGTGAAACCATGCg                                                                                          >  2:729217/1‑100 (MQ=255)
      aCCCTTCACAACCACATCACACCTGTTTTCACTTTTATCTTCTGTCTTCAGAGGTATCCCATTATGAAAATTATCACCCGTGGTGAAACCATGCGTATTc                                                                                     <  2:705957/100‑1 (MQ=255)
       cccTTCACAACCACATCACACCTGTTTTCACTTTTATCTTCTGTCTTCAGAGGTATCCCATTATGAAAATTATCACCCGTGGTGAAACCATGCGTATTCa                                                                                    >  1:1014758/1‑100 (MQ=255)
       cccTTCACAACCACATCACACCTGTTTTCACTTTTATCTTCTGTCTTCAGAGGTATCCCATTATGAAAATTATCACCCGTGGTGAAACCATGCGTATTCa                                                                                    >  2:593430/1‑100 (MQ=255)
       cccTTCACAACCACATCACACCTGTTTTCACTTTTATCTTCTGTCTTCAGAGGTATCCCATTATGAAAATTATCACCCGTGGTGAAACCATGCGTATTCa                                                                                    >  2:593490/1‑100 (MQ=255)
       cccTTCACAACCACATCACACCTGTTTTCACTTTTATCTTCTGTCTTCAGAGGTATCCCATTATGAAAATTATCACCCGTGGTGAAACCATGCGTATTCa                                                                                    <  2:687809/100‑1 (MQ=255)
            cacaACCACATCACACCTGTTTTTACTTTTATCTTCTGTCTTCAGAGGTAAAAAAAAAAAAAAATTATCACCCGTGGTGAAACCATGCGTATTCACcaac                                                                               <  2:376243/100‑1 (MQ=255)
              caACCACATCACACCTGTTTTCACTTTTATCTTCTGTCTTCAGAGGTATCCCATTATGAAAATTATCACCCGTGGTGAAACCATGCGTATTCACcaacaa                                                                             >  2:157311/1‑100 (MQ=255)
                aCCACATCACACCTGTTTTCACTTTTATCTTCTGTCTTCAGAGGTATCCCATTATGAAAATTATCACCCGTGGTGAAACCATGCGTATTCACCAacaaca                                                                           >  1:530440/1‑100 (MQ=255)
                  cacaTCACACCTGTTTTCACTTTTATCTTCTGTCTTCAGAGGTATCCCATTATGAAAATTATCACCCGTGGTGAAACCATGCGTATTCACCAACAACATc                                                                         >  2:193408/1‑100 (MQ=255)
                    caTCACACCTGTTTTCACTTTTATCTTCTGTCTTCAGAGGTATCCCATTATGAAAATTATCACCCGTGGTGAAACCATGCGTATTCACCAACAACATCCg                                                                       >  2:160518/1‑100 (MQ=255)
                      tCACACCTGTTTTCACTTTTATCTTCTGTCTTCAGAGGTATCCCATTATGAAAATTATCACCCGTGGTGAAACCATGCGTATTCACCAACAACATCCGAc                                                                     <  1:932115/100‑1 (MQ=255)
                      tCACACCTGTTTTCACTTTTATCTGCTGGCTTCAGAGGTATCCCATTATGAAAATTATCGCCCGTGGTGAAACCATGCGTATTCACCAACAACATCCGAc                                                                     <  1:227494/100‑1 (MQ=255)
                            cTGTTTTCACTTTTATCTTCTGTCTTCAGAGGTATCCCATTATGAAAATTATCACCCGTGGTGAAACCATGCGTATTCACCAACAACATCCGACATCCCg                                                               >  2:59663/1‑100 (MQ=255)
                            cTGTTTTCACTTTTATCTTCTGTCTTCAGAGGTATCCCATTATGAAAATTATCACCCGTGGTGAAACCATGCGTATTCACCAACAACATCCGACATCCCg                                                               <  2:167947/100‑1 (MQ=255)
                             tGTTTTCACTTTTATCTTCTGTCTTCAGAGGTATCCCATTATGAAAATTATCACCCGTGGTGAAACCATGCGTATTCACCAACAACATCCGACATCCCGt                                                              >  1:232984/1‑100 (MQ=255)
                             tGTTTTCACTTTTATCTTCTGTCTTCAGAGGTATCCCATTATGAAAATTATCACCCGTGGTGAAACCATGCGTATTCACCAACAACATCCGACATCCCGt                                                              >  1:869996/1‑100 (MQ=255)
                              gTTTTCACTTTTATCTTCTGTCTTCAGAGGTATCCCATTATGAAAATTATCACCCGTGGTGCAACCATGCGTATTCACCAACAACATCCGACATCCCGTc                                                             >  2:250589/1‑100 (MQ=255)
                              gTTTTCACTTTTATCTTCTGTCTTCAGAGGTATCCCATTATGAAAATTATCACCCGTGGTGAAACCATGCGTATTAACCAACAACATCCGACATCCCGTc                                                             >  2:1212625/1‑100 (MQ=255)
                                 ttCACTTTTATCTTCTGTCTTCAGAGGTATCCCATTATGAAAATTATCACCCGTGGTGAAACCATGCGTATTCACCAACAACATCCGACATCCCGTCttt                                                          >  2:264515/1‑100 (MQ=255)
                                    aCTTTTATCTTCTGTCTTCAGAGGTATCCCATTATGAAAATTATCACCCGTGGTGAAACCATGCGTATTCACCAACAACATCCGACATCCCGTCTTTTTc                                                       <  1:12175/100‑1 (MQ=255)
                                      ttttATCTTCTGTCTTCAGAGGTATCCCATTATGAAAATTATCACCCGTGGTGAAACCATGCGTATTCACCAACAACATCCGACATCCCGTCTTTTTCCg                                                     <  1:25389/100‑1 (MQ=255)
                                       tttATCTTCTGTCTTCAGAGGTATCCCATTATGAAAATTATCACCCGTGGTGAAACCATGCGTATTCACCAACAACATCCGACATCCCGTCTTTTTCCGt                                                    >  1:964643/1‑100 (MQ=255)
                                         tATCTTCTGTCTTCAGAGGTATCCCATTATGAAAATTATCACCCGTGGTGAAACCATGCGTATTCACCAACAACATCCGACATCCCGTCTTTTTCCGTTc                                                  <  2:172689/100‑1 (MQ=255)
                                         tATCTTCTGTCTTCAGAGGTATCCCATTATGAAAATTATCACCCGTGGTGAAACCATGCGTATTCACCAACAACATCCGACATCCCGTCTTTTTCCGTTc                                                  <  1:802502/100‑1 (MQ=255)
                                            cttctGTCTTCAGAGGTATCCCATTATGAAAATTATCACCCGTCGTGAAACCATGCGTATTCACCAACAACATCCGACATCCCGTCTTTTTCCGTTCTGt                                               >  2:619735/1‑100 (MQ=255)
                                                    ttCAGAGGTATCCCATTATGAAAATTATCACCCGTGGTGAAACCATTCGTATTCACCAACAACATCCGACATCCCGTCTTTTTCCGTTCTGTACCGGTa                                        <  2:562626/99‑1 (MQ=255)
                                                      cAGAGGTATCCCATTATGAAAATTATCACCCGTGGTGAAACCATGCGTATTCACCAACAACATCCGACATCCCGTCTTTTTCCGTTCTGTACCGGTAAAt                                     >  2:1277282/1‑100 (MQ=255)
                                                      cAGAGGTATCCCATTATGAAAATTATCACCCGTGGTGAAACCATGCGTATTCACCAACAACATCCGACATCCCGTCTTTTTCCGTTCTGTACCGGTAAAt                                     <  2:26669/100‑1 (MQ=255)
                                                       agagGTATCCCATTATGAAAATTATCACCCGTGGTGAAACCATGCGTATTCACCAACAACATCCGACATCCCGTCTTTTTCCGTTCTGTACCGGTAAATa                                    <  1:118605/100‑1 (MQ=255)
                                                          ggTATCCCATTATGAAAATTATCACCCGTGGTGAAACCATGCGTATTCACCAACAACATCCGACATCCCGTCTTTTTCCGTTCTGTACCGGTAAATACCg                                 >  1:772234/1‑100 (MQ=255)
                                                            tATCCCATTATGAAAATTATCACCCGTGGTGAAACCATGCGTATTCACCAACAACATCCGACATCCCGTCTTTTTCCGTTCTGTACCGGTAAATACCGCt                               >  2:942322/1‑100 (MQ=255)
                                                            tATCCCATTATGAAAATTATCACCCGTGGTGAAACCATGCGTATTCACCAACAACATCCGACATCCCGTCTTTTTCCGTTCTGTACCGGTAAATACCGCt                               <  1:1272293/100‑1 (MQ=255)
                                                              tCCCATTATGAAAATTATCACCCGTGGTGAAACCATGCGTATTCACCAACAACATCCGACATCCCGTCTTTTTCCGTTCTGTACCGGTAAATACCGCTgn                             <  1:639527/100‑2 (MQ=255)
                                                               cccATTATGAAAATTATCACCCGTGGTGAAACCATGCGTATTCACCAACAACATCCGACATCCCGTCTTTTTCCGTTCTGTACCGGTAAATACCGCTGGc                            <  1:575428/100‑1 (MQ=255)
                                                                  aTTATGAAAATTATCACCCGTGGTGAAACCATGCGTATTCACCAACAACATCCGACATCCCGTCTTTTTCCGTTCTGTACCGGTAAATACCGCTGGCACg                         >  1:1112995/1‑100 (MQ=255)
                                                                      tGAAAATTATCACCCGTGGTGAAACCATGCGTATTCACCAACAACATCCGACATCCCGTCTTTTTCCGTTCTGTACCGGTAAATACCGCTGGCACGGCAg                     >  2:663535/1‑100 (MQ=255)
                                                                      tGAAAATTATCACCCGTGGTGAAACCATGCGTATTCACCAACAACATCCGACATCCCGTCTTTTTCCGTTCTGTACCGGTAAATACCGCTGGCACGGCAg                     >  2:67478/1‑100 (MQ=255)
                                                                               tCACCCGTGGTGAAACCATGCGTATTCACCAACAACATCCGACATCCCGTCTTTTTCCGTTCTGTACCGGTAAATACCGCTGGCACGGCAGTGCTGAAGc            <  2:1040259/100‑1 (MQ=255)
                                                                                naCCCGTGGTGAAACCATGCGTATTCACCAACAACATCCGACATCCCGTCTTTTTCCGTTCTGTACCGGTAAATACCGCTGGCACGGCAGTGCTGAAGCg           >  2:203078/2‑100 (MQ=255)
                                                                                 aCCCGTGGTGAAACCATGCGTATTCACCAACAACATCCGACATCCCGTCTTTTTCCGTTCTGTACCGGTAAATACCGCTGGCACGGCAGTGCTGAAGCGt          >  1:873097/1‑100 (MQ=255)
                                                                                  cccGTGGTGAAACCATGCGTATTCACCAACAACATCCGACATCCCGTCTTTTTCCGTTCTGTACCGGTAAATACCGCTGGCACGGCAGTGCTGAAGCGta         >  1:274972/1‑100 (MQ=255)
                                                                                       ggtgAAACCATGCGTATTCACCAACAACATCCGACATCCCGTCTTTTTCCGTTCTGTACCGGTAAATACCGCTGGCACGGCAGTGCTGAAGCGTATACCg    >  2:353002/1‑100 (MQ=255)
                                                                                        gtgAAACCATGCGTATTCACCAACAACATCCGACATCCCGTCTTTTTCCGTTCTGTACCGGTAAATACCGCTGGCACGGCAGTGCTGAAGCGTATACCgg   <  1:619739/100‑1 (MQ=255)
                                                                                         tgAAACCATGCGTATTCACCAACAACATCCGACATCCCGTCTTTTTCCGTTCTGTACCGGTAAATACCGCTGGCACGGCAGTGCTGAAGCGTATACCGGt  >  1:528940/1‑100 (MQ=255)
                                                                                             |                                                                                               
GCTTTAACCCTTCACAACCACATCACACCTGTTTTCACTTTTATCTTCTGTCTTCAGAGGTATCCCATTATGAAAATTATCACCCGTGGTGAAGCCATGCGTATTCACCAACAACATCCGACATCCCGTCTTTTTCCGTTCTGTACCGGTAAATACCGCTGGCACGGCAGTGCTGAAGCGTATACCGGT  >  NC_000913/2076748‑2076936

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑