| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 2,645,886 | (C)5→4 | 100% | coding (1440/2313 nt) | pbpC ← | penicillin‑insensitive murein repair transglycosylase; inactive transpeptidase domain protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,645,882 | 0 | C | . | 99.2% | 581.5 / ‑3.2 | 126 | coding (1444/2313 nt) | pbpC | penicillin‑insensitive murein repair transglycosylase; inactive transpeptidase domain protein |
| Reads supporting (aligned to +/- strand): ref base C (1/0); new base . (62/63); total (63/63) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 140 total aligned reads displayed.
TGGTGCCCGTTTTCCATGCCAGTGGGGCGACGCGCGGCAAGGCACTATCCGGCAAGGGTTGCGCTTCATCAGCCATAATCCGGCGAATGATCCACGCCGCCCCCGACGACATTAAAGGCCGTTCAAGCAGCGGATCGTCAGGCTGTAAGCGCAATTTGCCTGCCTTGCCGTGGCGAGCAAACGCGGTATACGCTG > NC_000913/2645783‑2645977 | tGGTGCCCGTTTTCCATGCCAGTGGGGCGACGCGCGGCAAGGCACTATCCGGGAAGGGTTGCGCTTCACCAGCCATAATCTGGCGAATGATCCAcgccgc > 1:6523/1‑100 (MQ=255) ggTGCCCGTTTTCCATGCCAGTGGGGCGACGCGCGGCAAGGCACTATCCGGCAAGGGTTGCGCTTCATCAGCCATAATCCGGCGAATTATCCACgccgcc < 2:2494670/100‑1 (MQ=255) ggTGCCCGTTTTCCATGCCAGTGGGGCGACGCGCGGCAAGGCACTATCCGGCAAGGGTTGCGCTTCATCAGCCATAATCCGGCGAATGATCCACgccgcc > 1:1329722/1‑100 (MQ=255) gTGCCCGTTTTCCATGCCAGTGGGGCGACGCGCGGCAAGGCACTATCCGGCAAGGGTTGCGCTTCATCAGCCATAATCCGGCGAATGATCCACGCCGccc > 1:1112326/1‑100 (MQ=255) tGCCCGTTTTCCATGCCAGTGGGGCGACGCGCGGCAAGGCACTATCCGGCAAGGGTTGCGCTTCATCAGCCATAATCCGGCGAATGATCCACGCCGcccc < 2:1361194/100‑1 (MQ=255) tGCCCGTTTTCCATGCCAGTGGGGCGACGCGCGGCAAGGCACTATCCGGCAAGGGTTGCGCTTCATCAGCCATAATCCGGCGAATGATCCACGCCGcccc > 2:3041000/1‑100 (MQ=255) gCCCGTTTTCCATGCCAGTGGGGCGACGCGCGGCAAGGCACTATCCGGCAAGGGTTGCGCTTCATCAGCCATAATCCGGCGAATGATCCACGCCGccccg > 1:3659286/1‑99 (MQ=255) gCCCGTTTTCCATGCCAGTGGGGCGACGCGCGGCAAGGCACTATCCGGCAAGGGTTGCGCTTCATCAGCCATAATCCGGCGAATGATCCACGCCGccccg > 2:2397736/1‑99 (MQ=255) cccGTTTTCCATGCCAGTGGGGCGACGCGCGGCAAGGCACTATCCGGCAAGGGTTGCGCTTCATCAGCCATAATCCGGCGAATGATCCACGCCGccccga > 2:1493176/1‑98 (MQ=255) cccGTTTTCCATGCCAGTGGGGCGACGCGCGGCAAGGCACTATCCGGCAAGGGTTGCGCTTCATCAGCCATAATCCGGCGAATGATCCACGCCGccccg > 1:1060367/1‑98 (MQ=255) cGTTTTCCATGCCAGTGGGGCGACGCGCGGCAAGGCACTATCCGGCAAGGGTTGCGCTTCATCAGCCATAATCCGGCGAATGATCCACGCCGccccgacg < 2:1918422/100‑5 (MQ=255) cGTTTTCCATGCCAGTGGGGCGACGCGCGGCAAGGCACTATCCGGCAAGGGTTGCGCTTCATCAGCCATAATCCGGCGAATGATCCACGCCGccccgacg < 2:863406/100‑5 (MQ=255) gTTTTCCATGCCAGTGGGGCGACGCGCGGCAAGGCACTATCCCGCAAGGGTTGCGCTTCATCACCCATAATCCGGCGAATGATCCACGCCG‑CCCcgacga > 1:2168995/1‑100 (MQ=255) ttttCCATGCCAGTGGGGCGACGCGCGGCAAGGCACTATCCGGCAAGGGTTGCGCTTCATCAGCCATAATCCGGCGAATGATCCACGCCG‑CCCCgacgac < 2:2028353/100‑1 (MQ=255) tCCATGCCAGTGGGGCGACGCGCGGCAAGGCACTATCCGGCAAGGGTTGCGCTTCATCAGCCATAATCCGGCGAATGATCCACGCCG‑CCCCGACGACAtt > 1:592191/1‑100 (MQ=255) tCCATGCCAGTGGGGCGACGCGCGGCAAGGCACTATCCGGCAAGGGTTGCGCTTCATCAGCCATAATCCGGCGAATGATCCACGCCG‑CCCAGACGACAtt > 2:597777/1‑100 (MQ=255) ccATGCCAGTGGGGCGACGCGCGGCAAGGCACTATCCGGCAAGGGTTGCGCTTCATCAGCCATAATCCGGCGAATGATCCACGCCG‑CCCCGACGACATTa < 2:232739/100‑1 (MQ=255) cATGCCAGTGGGGCGACGCGCGGCAAGGCACTATCCGGCAAGGGTTGCGCTTCATCAGCCATAATCCGGCGAATGATCCACGCCG‑CCCCGACGACATTaa > 2:2343936/1‑100 (MQ=255) cATGCCAGTGGGGCGACGCGCGGCAAGGCACTATCCGGCAAGGGCTGCGCTTCATCAGCCATAATCCGGCGAATGATCCACGCCG‑CCCCGACGACATTaa > 1:2592592/1‑100 (MQ=255) aTGCCAGTGGGGCGACGCGCGGCACGGCACTATCCGGCAAGGGTTGCGCTTCATCAGCCATAATCCGGCGAATGATCCACGCCG‑CCCCGCCGACATTaa > 1:156539/1‑99 (MQ=255) aTGCCAGTGGGGCGACGCGCGGCAAGGCACTATCCGGCAAGGGTTGCGCTTCATCAGCCATAATCCGGCGAATGATCCACGCCG‑CCCCGACGACATTaaa > 1:2040893/1‑100 (MQ=255) tGCCAGTGGGGCGACGCGCGGCAAGGCACTATCCGGCAAGGGTTGCGCTTCATCAGCCATAATCCGGCGAATGATCCACGCCG‑CCCCGACGACATTAAAg < 2:1565295/100‑1 (MQ=255) tGCCAGTGGGGCGACGCGCGGCAAGGCACTATCCGGCAAGGGTTGCGCTTCATCAGCCATAATCCGGCGAATGATCCACGCCG‑CCCCGACGACATTAAAg > 2:932700/1‑100 (MQ=255) ccAGTGGGGCGACGCGCGGCAAGGCACTATCCGGCAAGGGTTGCGCTTCATCAGCCATAATCCGGCGAATGATCCACGCCG‑CCCCGACGACATTAAAGGc > 2:1058198/1‑100 (MQ=255) ccAGTGGGGCGACGCGCGGCAAGGCACTATCCGGCAAGGGTTGCGCTTCATCAGCCATAATCCGGCGAATGATCCACGCCG‑CCCCGACGACATTAAAGGc > 2:2307896/1‑100 (MQ=255) gTGGGGCGACGCGCGGCAAGGCACTATCCGGCAAGGGTTGCGCTTCATCAGCCATAATCCGGCGAATGATCCACGCCG‑CCCCGACGACATTAAAGGCCGt < 2:3297165/100‑1 (MQ=255) gTGGGGCGACGCGCGGCAAGGCACTATCCGGCAAGGGTTGCGCTTCATCAGCCATAATCCGGCGAATGATCCACGCCG‑CCCCGACGACATTAAAGGCCGt < 2:1850841/100‑1 (MQ=255) ggggCGACGCGCGGCAAGGCACTATCCGGCAAGGGTTGCGCTTCATCAGCCATAATCCGGCGAATGATCCACGCCG‑CCCCGACGACATTAAAGGCCGtt < 1:3236048/99‑1 (MQ=255) ggggCGACGCGCGGCAAGGCACTATCCGGCAAGGGTTGCGCTTCATCAGCCATAATCCGGCGAATGATCCACGCCG‑CCCCGACGACATTAAAGGCCGTTc > 1:2993271/1‑100 (MQ=255) gggCGACGCGCGGCAAGGCACTATCCGGCAAGGGTTGCGCTTCATCAGCCATAATCCGGCGAATGATCCACGCCG‑CCCCGACGACATTAAAGGCCGTTCa > 2:3225715/1‑100 (MQ=255) gggCGACGCGCAGCAAGGCACTATCCGGCAAGGGTTGCGCTTCATCAGCCATAATCCGGCGAATGATCCACGCCG‑CCCCGACGACATTAAAGGCCGTTCa < 1:919991/100‑1 (MQ=255) ggCGACGCGCGGCAAGGCACTATCCGGCAAGGGTTGCGCTTCATCAGCCATAATCCGGCGAATGATCCACGCCG‑CCCCGACGACATTAAAGGCCGTTCaa > 2:1470121/1‑100 (MQ=255) cGACGCGCGGCAAGGCACTATCCGGCAAGGGTTGCGCTTCATCAGCCATAATCCGGCGAATGATCCACGCCG‑CCCCGACGACATTAAAGGCCGTTCAagc > 2:2153843/1‑100 (MQ=255) cgcgcgGCAAGGCACTATCCGGCAAGGGTTGCGCTTCATCAGCCATAATCCGGCGAATGATCCACGCCG‑CCCCGACGACATTAAAGGCCGTTCAagcagc < 2:2121246/100‑1 (MQ=255) cgcgcgGCAAGGCACTATCCGGCAAGGGTTGCGCTTCATCAGCCATAATCCGGCGAATGATCCACGCCG‑CCCCGACGACATTAAAGGCCGTTCAagcagc < 1:36877/100‑1 (MQ=255) gcgcgGCAAGGCACTATCCGGCAAGGGTTGCGCTTCATCAGCCATAATCCGGCGAATGATCCACGCCG‑CCCCGACGACATTAAAGGCCGTTCAagcagcc < 2:1323637/100‑2 (MQ=255) cgcgGCAAGGCACTATCCGGCAAGGGTTGCGCTTCATCAGCCATAATCCGGCGAATGATCCACGCCG‑CCCCGACGACATTAAAGGCCGTTCAAGCAGCgg > 2:2441577/1‑100 (MQ=255) cgcgGCAAGGCACTATCCGGCAAGGGTTGCGCTTCATCAGCCATAATCCGGCGAATGATCCACGCCG‑CCCCGACGACATTAAAGGCCGTTCAAGCAGCgg < 1:2629452/100‑1 (MQ=255) cgGCAAGGCACTATCCGGCAAGGGTTGCGCTTCATCAGCCATAATCCGGCGAATGATCCACGCCG‑CCCCGACGACATTAAAGGCCGTTCAAGCAGCGGAt > 1:1664194/1‑100 (MQ=255) cAAGGCACTATCCGGCAAGGGTTGCGCTTCATCAGCCATAATCCGGCGAATGATCCACGCCG‑CCCCGACGACATTAAAGGCCGTTCAAGCAGCGGATCGt < 1:3131778/100‑1 (MQ=255) gCACTATCCGGCAAGGGTTGCGCTTCATCAGCCATAATCCGGCGAATGATCCACGCCG‑CCCCGACGACATTAAAGGCCGTTCAAGCAGCGGATCGTCAgg > 2:2753199/1‑100 (MQ=255) cACTATCCGGCAAGGGTTGCGCTTCATCAGCCATAATCCGGCGAATGATCCACGCCG‑CCCCGACGACATTAAAGGCCGTTCAAGCAGCGGATCGTCAGGc < 2:2766502/100‑1 (MQ=255) cACTATCCGGCAAGGGTTGCGCTTCATCAGCCATAATCCGGCGAATGATCCACGCCG‑CCCCGACGACATTAAAGGCCGTTCAAGCAGCGGATCGTCAGGc > 2:1797231/1‑100 (MQ=255) cTATCCGGCAAGGGTTGCGCTTCATCAGCCATAATCCGGCGAATGATCCACGCCG‑CCCCGACGACATTAAAGGCCGTTCAAGCAGCGGATCGTCAGGCTg > 2:1083928/1‑100 (MQ=255) cTATCCGGCAAGGGTTGCGCTTCATCAGCCATAATCCGGCGAATGATCCACGCCG‑CCCCGACGACATTAAAGGCCGTTCAAGCAGCGGATCGTCAGGCTg > 1:2901569/1‑100 (MQ=255) tATCCGGCAAGGGTTGCACTTCATCAGCCATAATCCGACCACTGATCCACGCCG‑CCCCGACGACCCTCAAGACCGGGCAAGCAGCGGCTCGTCAgcc > 1:947161/1‑95 (MQ=255) aTCCGGCGAGGGTTGCGCGTCATCCGCCATAATCCGGCGAATAATCCACCCCG‑ACCCGACGACATGAAAGGCCGGTCAAGCAGCGGATCGTCCGGCTGTa > 1:2381532/1‑100 (MQ=255) aTCCGGCAAGGGTTGCGCTTCATCAGCCATAATCCGGCGAATGATCCACGCCG‑CCCCGACGACATTAAAGGCCGTTCAAGCAGCGGATCGTCAGGCTGTa < 2:1631888/100‑1 (MQ=255) ccGGCAAGGGTTGCGCTTCATCAGCCATAATCCGGCGAATGATCCACGCCG‑CCCCGACGACATTAAAGGCCGTTCAAGCAGCGGATCGTCAGGCTGTa > 1:2912005/1‑98 (MQ=255) ccGGCAAGGGTTGCGCCTCATCAGCCATAATCCGGCGAATGCTCCACGCCG‑CCCCGACGCCATTAAAGGCCGCGCAAGCAACGGATCGTCCGGCTGCAAg > 1:1819788/1‑100 (MQ=255) cGGCAAGGGTTGCGCTTCATCAGCCATAATCCGGCGAATGATCCACGCCG‑CCCCGACGACATTAAAGGCCGTTCAAGCAGCGGATCGTCAGGCTGTAAgc > 2:1754957/1‑100 (MQ=255) cGGCAAGGGTTGCGCTTCATCAGCCATAATCCGGCGAATGATCCACGCCG‑CCCCGACGACATTAAAGGCCGTTCAAGCAGCGGATCGTCAGGCTGTAAgc > 2:3764940/1‑100 (MQ=255) ggCAAGGGTTGCGCTTCATCAGCCATAATCCGGCGAATGATCCACGCCG‑CCCCGACGACATTAAAGGCCGTTCAAGCAGCGGATCGTCAGGCTGTAAgcg > 1:2798370/1‑100 (MQ=255) ggCAAGGGTTGCGCTTCATCAGCCATAATCCGGCGAATGATCCACGCCG‑CCCCGACGACATTAAAGGCCGTTCAAGCAGCGGATCGTCAGGCTGTAAgcg < 1:533777/100‑1 (MQ=255) ggCAAGGGTTGCGCTTCATCAGCCATAATCCGGCGAATGATCCACGCCG‑CCCCGACGACATTAAAGGCCGTTCAAGCAGCGGATCGTCAGGCTGTAAgc > 1:931487/1‑99 (MQ=255) gCAAGGGTTGCGCTTCATCAGCCATAATCCGGCGAATGATCCACGCCG‑CCCCGACGACATTAAAGGCCGTTCAAGCAGCGGATCGTCAGGCTGTAAgcgc > 2:340956/1‑100 (MQ=255) cAAGGGTTGCGCTTCATCAGCCATAATCCGGCGAATGATCCACGCCG‑CCCCGACGACATTAAAGGCCGTTCAAGCAGCGGATCGTCAGGCTGTAAGCGCa < 1:385239/100‑1 (MQ=255) aGGGTTGCGCTTCATCAGCCATAATCCGGCGAATGATCCACGCCG‑CCCCGACGACATTAAAGGCCGTTCAAGCAGCGGATCGTCAGGCTGTAAGCGCAAt < 1:3040715/100‑1 (MQ=255) ggTTGCGCTTCATCAGCCATAATCCGGCGAATGATCCACGCCG‑CCCCGACGACATTAAAGGCCTTTCAAGCAGCGGATCGTCAGGCTGTAAGCGCAAttt < 2:2673414/100‑1 (MQ=255) gTTGCGCTTCATCAGCCATAATCCGGCGAATGATCCACGCCG‑CCCCGACGACATTAAAGGCCGTTCAAGCAGCGGATCGTCAGGCTGTAAGCGCAATTtg < 1:838253/100‑1 (MQ=255) gTTGCGCTTCATCAGCCATAATCCGGCGAATGATCCACGCCG‑CCCCGACGACATTAAAGGCCGTTCAAGCAGCGGATCGTCAGGCTGTAAGCGCAATTtg > 2:3702321/1‑100 (MQ=255) gTTGCGCTTCATCAGCCATAATCCGGCGAATGATCCACGCCG‑CCCCGACGACATTAAAGGCCGTTCAAGCAGCGGATCGTCAGGCTGTAAGCGCAATTtg < 2:3395141/100‑1 (MQ=255) ttGCGCTTCATCAGCCATAATCCGGCGAATGATCCACGCCG‑CCCCGACGACATTAAAGGCCGTTCAAGCAGCGGATCGTCAGGCTGTAAGCGCAATTtgc < 2:2358135/100‑1 (MQ=255) cgcTTCATCAGCCATAATCCGGCGAATGTTCCACGCCG‑CCCCGACGACATTAAAGGCCGTTCAAGCAGCGGATCGTCAGGCTGTAAGCGCAATTtgcctg < 1:1845549/100‑1 (MQ=255) cgcTTCATCAGCCATAATCCGGCGAATGATCCACGCCG‑CCCCGACGACATTAAAGGCCGTTCAAGCAGCGGATCGTCAGGCTGTAAGCGCAATTtgcctg > 2:543008/1‑100 (MQ=255) cgcTTCATCAGCCATAATCCGGCGAATGAACCACGCCG‑CCCCGACGACATTAAAGGCCGTTCAAGCAGCGGATCGTCAGGCTGTAAGCGCAATTtgcctg < 1:3298329/100‑1 (MQ=255) cTTCATCAGCCATAATCCGGCGAATGATCCACGCCG‑CCCCGACGACATTAAAGGCCGTTCAAGCAGCGGATCGTCAGGCTGTAAGCGCAATTtgcctgcc < 2:1908876/100‑1 (MQ=255) cTTCATCAGCCATAATCCGGCGAATGATCCACGCCG‑CCCCGACGACATTAAAGGCCGTTCAAGCAGCGGATCGTCAGGCTGTAAGCGCAATTtgcctgcc < 1:22297/100‑1 (MQ=255) tcatcaGCCATAATCCGGCGAATGATCCACGCCG‑CCCCGACGACATTAAAGGCCGTTCAAGCAGCGGATCGTCAGGCTGTAAGCGCAATTTGCCTGCCtt > 2:57490/1‑100 (MQ=255) atcaGCCATAATCCGGCGAATGATCCACGCCG‑CCCCGACGACATTAAAGGCCGTTCAAGCAGCGGATCGTCAGGCTGTAAGCGCAATTTGCCTGCCTTGc < 2:2083685/100‑1 (MQ=255) tcaGCCATAATCCGGCTAATGATCCACGCCG‑CCCCGACGACATTAAAGGCCGTTCAAGCAGCGGATCGTCAGGCTGTAAGCGCAATTTGCCTGCCTTGcc < 1:2223467/100‑1 (MQ=255) caGCCATAATCCGGCGAATGATCGACGCCG‑CCCCGACGATATTAAAGGCCGTTCAAGCAGCGGATCGTCAGGCTGTACGCGCAATTTCCCTGCCTTGCCg > 1:2761996/1‑100 (MQ=255) caGCCATAATCCGGCGAATGATCCACGCCG‑CCCCGACGACATTAAAGGCCGTTCAAGCAGCGGATCGTCAGGCTGTAAGCGCAATTTGCCTGCCTTGCCg > 2:2081716/1‑100 (MQ=255) caGCCATAATCCGGCGAATGATCCACGCCG‑CCCCGACGACATTAAAGGCCGTTCAAGCAGCGGATCGTCAGGCTGTAAGCGCAATTTGCCTGCCTTGCCg > 2:2971527/1‑100 (MQ=255) aGCCATAATCCGGCGAATGATCCACGCCG‑CCCTGACGACATTAAAGGCCGTTCAAGCAGCGGATCGTCAGGCTGTAAGCGCAATTTGCCTGCCTTGCCg < 1:3203580/99‑1 (MQ=255) gCCATAATCCGGCGAATGATCCACGCCG‑CCCCGACGACATTAAAGGCCGTTCAAGCAGCGGATCGTCAGGCTGTAAGCGCAATTTGCCTGCCTTGCCGTg < 1:974590/100‑1 (MQ=255) ccATAATCCGGCGAATGATCCACGCCG‑CCCCGACGACATTAAAGGCCGTTCAAGCAGCGGATCGTCAGGCTGTAAGCGCAATTTGCCTGCCTTGCCGTgg < 1:1043945/100‑1 (MQ=255) ccATAATCCGGCGAATGATCCACGCCG‑CCCCGACGACATTAAAGGCCGTTCAAGCAGCGGATCGTCAGGCTGTAAGCGCAATTTGCCTGCCTTGCCGTgg < 1:1736998/100‑1 (MQ=255) cATAATCCGGCGAATGATCCACGCCG‑CCCCGACGACATTAAAGGCCGTTCAAGCAGCGGATCGTCAGGCTGTAAGCGCAATTTGCCTGCCTTGCCGTGGc < 2:3183653/100‑1 (MQ=255) aTAATCCGGCGAATGATCCACGCCG‑CCCCGACGACATTAAAGGCCGTTCAAGCAGCGGATCGTCAGGCTGTAAGCGCAATTTGCCTGCCTTGCCGTGGCg < 2:434333/100‑1 (MQ=255) aTAATCCGGCGAATGATCCACGCCG‑CCCCGACGACATTAAAGGCCGTTCAAGCAGCGGATCGTCAGGCTGTAAGCGCAATTTGCCTGCCTTGCCGTGGCg < 2:464947/100‑1 (MQ=255) tAATCCGGCGAATGATCCACGCCG‑CCCCGACGACATTAAAGGCCGTTCAAGCAGCGGATCGTCAGGCTGTAAGCGCAATTTGCCTGCCTTGCCGTGGCGa > 1:1747385/1‑100 (MQ=255) tAATCCGACGAATGATCCACGCCG‑CCCCGACGACATTAAAGGCCGATCAAGCAGCGGATCGTCAAACTGTAAGCGCAATTTGCCTGCCTTGCCGTGGc > 1:762310/1‑98 (MQ=255) aaTCCGGCGAATGATCCACGCCG‑CCCCGACGACATTAAAGGCCGTTCAAGCAGCGGATCGTCAGGCTGTAAGCGCAATTTGCCTGCCTTGCCGTGGCGAg > 2:481616/1‑100 (MQ=255) aaTCCGGCGAATGATCCACGCCG‑CCCCGACGACATTAAAGGCCGTTCAAGCAGCGGATCGTCAGGCTGTAAGCGCAATTTGCCTGCCTTGCCGTGGCGAg < 1:2379277/100‑1 (MQ=255) aaTCCGGCGAACGACCCACGCCG‑CCCCGACGACATTAAATGCCGTTCAAGCAGCGGATCGTCAGGCTGTAATCGCAATTAACCTGCCTTGCAGTGGc > 1:3564854/1‑97 (MQ=255) aTCCGGCGAATGATCCACGCCG‑CCCCGACGACATTAAAGGCCGTTCAAGCAGCGGATCGTCAGGCTGTAAGCGCAATTTGCCTGCCTTGCCGTGGCg > 1:1835547/1‑97 (MQ=255) tCCGGCGAATGATCCACGCCG‑CCCCGACGACATTAAAGGCCGTTCAAGCAGCGGATCGTCAGGCTGTAAGCGCAATTTGCCTGCCTTGCCGTGGCGAGCa < 2:2627082/100‑1 (MQ=255) cGGCGAATGATCCACGCCG‑CCCCGACGACATTAAAGGCCGTTCAAGCAGCGGATCGTCAGGCTGTAAGCGCAATTTGCCTGCCTTTCCGTGGCGAGCaaa > 1:3057515/1‑100 (MQ=255) ggCGAATGATCCACGCCG‑CCCCGACGACATTAAAGGCCGTTCAAGCAGCGGATCGTCAGGCTGTAAGCGCAATTTGCCTGCCTTGCCGTGGCGAGCaa > 1:2419342/1‑98 (MQ=255) gCGAATGATCCACGCCG‑CCCCGACGACATTAAAGGCCGTTCAAGCAGCGGATCGTCAGGCTGTAAGCGCAATTTGCCTGCCTTGCCGTGGCGAGCAAAcg < 2:1466363/100‑1 (MQ=255) cGAATGATCCACGCCG‑CCCCGACGACATTAAAGGCCGTTCAAGCAGCGGATCGTCAGGCTGTAAGCGCAATTTGCCTGCCTTGCCGTGGCGAGCAAAcgc > 1:3462665/1‑100 (MQ=255) cGAATGATCCACGCCG‑CCCCGACGACATTAAAGGCCGTGCAAGCAGCGGATCGTCAGGCTGTAAGCGCAATTTGCCTGCCTTGCCGTGGCGAGCAAAcgc < 1:59219/100‑1 (MQ=255) aTGATCCACGCCG‑CCCCGACGACATTAAAGGCCGTTCAAGCAGCGGATCGTCAGGCTGTAAGCGCAATTTGCCTGCCTTGCCGTGGCGAGCAAACGCGGt < 1:961643/100‑1 (MQ=255) tGATCCACGCCG‑CCCCGACGACATTAAAGGCCGTTCAAGCAGCGGATCGTCAGGCTGTAAGCGCAATTTGCCTGCCTTGCCGTGGCGAGCAAACGCGGta < 1:2880486/100‑1 (MQ=255) gATCCACGCCG‑CCCCGACGACATTAAAGGCCGTTCAAGCAGCGGATCGTCAGGCTGTAAGCGCAATTTGCCTGCCTTGCCGTGGCGAGCAAACGCGGtat > 2:2332176/1‑100 (MQ=255) gATCCACGCCG‑CCCCGACGACATTAAAGGCCGTTCAAGCAGCGGATCGTCAGGCTGTAAGCGCAATTTGCCTGCCTTGCCGTGGCGAGCAAACGCGGtat > 1:327867/1‑100 (MQ=255) gATCCACGCCG‑CCCCGACGACATTAAAGGCCGTTCAAGCAGCGGATCGTCAGGCTGTAAGCGCAATTTGCCTGCCTTGCCGTGGCGAGCAAACGCGGtat < 2:27499/100‑1 (MQ=255) aCGCCG‑CCCCGACGACATTAAAGGCCGTTCAAGCAGCGGATCGTCAGGCTGTAAGCGCAATTTGCCTGCCTTGCCGTGGCGAGCAAACGCGGTATACGc > 1:3638288/1‑99 (MQ=255) cgccg‑cCCCGACGACATTAAAGGCCGTTCAAGCAGCGGATCGTCAGGCTGTAAGCGCAATTTGCCTGCCTTGCCGTGGCGAGCAAACGCGGTATACGCTg > 2:1184926/1‑100 (MQ=255) | TGGTGCCCGTTTTCCATGCCAGTGGGGCGACGCGCGGCAAGGCACTATCCGGCAAGGGTTGCGCTTCATCAGCCATAATCCGGCGAATGATCCACGCCGCCCCCGACGACATTAAAGGCCGTTCAAGCAGCGGATCGTCAGGCTGTAAGCGCAATTTGCCTGCCTTGCCGTGGCGAGCAAACGCGGTATACGCTG > NC_000913/2645783‑2645977 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |