Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_000913 3,639,879 (T)8→7 100% intergenic (‑159/‑232) uspB ← / → uspA universal stress (ethanol tolerance) protein B/universal stress global response regulator

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,639,8720T.94.9% 570.8 / 17.3 136intergenic (‑152/‑239)uspB/uspAuniversal stress (ethanol tolerance) protein B/universal stress global response regulator
Reads supporting (aligned to +/- strand):  ref base T (3/2);  new base . (67/62);  total (71/65)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.93e-01

Only 100 of 154 total aligned reads displayed.

CGCTGCCAATCAGTTAACACCAGGTCCTGGAGAAACCGCTTTTGTGGTGACCAACATACGAGCGGCTCTATAGATAGTGTAGGAGATCAGGTTGTTTTTTTTCCAGAAGGTTAACCACTATCAATATATTCATGTCGAAAATTTGTTTATCTAACGAGTAAGCAAGGCGGATTGACGGATCATCCGGGTC  >  NC_000913/3639778‑3639967
                                                                                              |                                                                                               
cGCTGCCAATCAGTTAACACCAGGTCCTGGAGAAACCGCTTTTGTGGTGACCAACATACGAGCGGCTCTATAGATAGTGTAGGAGATCAGGTTGtttttt                                                                                            <  1:1032981/100‑1 (MQ=255)
 gCTGCCAATCAGTTAACACCAGGTCCTGGAGAAACCGCTTTTGTGGTGACCAACATACGAGCGGCTCTATAGATAGTGTAGGAGATCAGGTTGttttttt                                                                                           <  2:1209809/100‑1 (MQ=255)
 gCTGCCAATCAGTTAACACCAGGTCCTGGAGAAACCGCTTTTGTGGTGACCAACATACGAGCGGCTCTATAGATAGTGTAGGAGATCAGGTTGttttttt                                                                                           <  2:1568271/100‑1 (MQ=255)
 gCTGCCAATCAGTTAACACCAGGTCCTGGAGAAACCGCTTTTGTGGTGACCAACATACGAGCGGCTCTATAGATAGTGTAGGAGATCAGGTTGttttttt                                                                                           <  2:117249/100‑1 (MQ=255)
 gCTGCCAATCAGTTAACACCAGGTCCTGGAGAAACCGCTTTTGTGGTGACCAACATACGAGCGGCACTATAGATAGTGTAGGAGATCAGGTTGtttttt                                                                                            >  1:745154/1‑99 (MQ=255)
  cTGCCAATCAGTTAACACCAGGTCCTGGAGAAACCGCTTTTGTGGTGACCAACATACGAGCGGCTCTATAGATAGTGTAGGAGATCAGGTTGtttttttc                                                                                          <  1:1548523/100‑2 (MQ=255)
    gCCAATCAGTTAACACCAGGTCCTGGAGAAACCGCTTTTTTTTTTTTTTTCATACGAGCGGCTCTACAGATAGTGTAGGAGATCAGGTTGttttttt                                                                                           >  1:606741/1‑97 (MQ=255)
    gCCAATCAGTTAACACCAGGTCCTGGAGAAACCGCTTTTGTGGTGACCAACATACGAGCGGCTCTATAGATAGTGTAGGAGATCAGGTTGtttttttcca                                                                                        <  1:3150854/100‑4 (MQ=255)
     ccAATCAGTTAACACCAGGTCCTGGAGAAACCGCTTTTGTGGTGACCAACATACGAGCGGCTCTATAGATAGTGTAGGAGATCAGGTTGTTTTTTTTCCa                                                                                       <  2:3403427/100‑1 (MQ=255)
     ccAATCAGTTAACACCAGGTCCTGGAGAAACCGCGTTTGTGGTGACCAACATACGAGCGGCTCTATAGATAGTGTAGGAGATCAGGTTGtttttttccag                                                                                       <  1:352723/100‑5 (MQ=255)
       aaTCAGTTAACACCAGGTCCTGGAGAAACCGCTTTTGTGGTGACCAACATACGAGCGGCTCTATAGATAGTGTAGGAGATCAGGTTGTTTTTTTCCAGaa                                                                                    >  2:1043058/1‑100 (MQ=255)
         tCAGTTAACACCAGGTCCTGGAGAAACCGCTTTTGTGGTGACCAACATACGAGCGGCTCTATAGATAGTGTAGGAGATCAGGTTGTTTTTTTCCAGAAgg                                                                                  <  1:2915702/100‑1 (MQ=255)
           aGTTAACACCAGGTCCTGGAGAAACCGCTTTTGTGGTGACCAACATACGAGCGGCTCTATAGACAGTGTAGGAGATCAGGTTGTTTTTTTCCAGAAGGtt                                                                                >  2:620894/1‑100 (MQ=255)
            gTTAACACCAGGTCCTGGAGAAACCGCTTTTGTGGTGACCGACATACGAGCGGCTCTATAGATAGTGTAGGAGATCAGGTTGTTTTTTTCCAGAAGGt                                                                                 <  1:1790684/98‑1 (MQ=255)
            gTTAACACCAGGTCCTGGAGAAACCGCTTTTGTGGTGACCAACATACGAGCGGCTCTATAGATAGTGTAGGAGATCAGGTTGTTTTTTTCCATAAGCTTa                                                                               >  1:918078/1‑100 (MQ=255)
            gTTAACACCAGGTCCTGGAGAAACCGCTTTTGTGGTGACCAACATACGAGCGGCTCTATAGATAGTGTAGGAGATCAGGTTGTTTTTTTCCAGAAGGTTa                                                                               >  2:1487749/1‑100 (MQ=255)
            gTTAACACCAGGTCCTGGAGAAACCGCTTTTGTGGTGACCAACATACGAGCGGCTCTATAGATAGTGTAGGAGATCAGGTTGTTTTTTTCCAGAAGGTTa                                                                               <  1:1027139/100‑1 (MQ=255)
             ttAACACCAGGTCCTGGAGAAACCGCTTTTGTGGTGACCAACATACGAGCGGCTCTATAGATAGTGTAGGAGATCAGGTTGTTTTTTTCCAGAAGGTTaa                                                                              <  1:3731771/100‑1 (MQ=255)
              tAACACCAGGTCCTGGAGAAACCGCTTTTGTGGTGACCAACATACGAGCGGCTCTATAGATAGTGTAGGAGATCAGGTTGTTTTTTTCCAGAAGGTTAAc                                                                             >  2:215101/1‑100 (MQ=255)
              tAACACCAGGTCCTGGAGAAACCGCTTTTGTGGTGACCAACATACGAGCGGCTCTATAGATAGTGTAGGAGATCAGGTTGTTTTTTTCCAGAAGGTTAAc                                                                             >  2:1084548/1‑100 (MQ=255)
               aaCACCAGGTCCTGGAGAAACCGCTTTTGTGGTGACCAACATACGAGCGGCTCTATAGATAGTGTAGGAGATCAGGTTGTTTTTTTCCAGAAGGTTAAc                                                                             >  1:1237755/1‑99 (MQ=255)
               aaCACCAGGTCCTGGAGAAACCGCTTTTGGGGTGACGAACACACGAGCGGCTCTATAGATAGTGTAGGAGATCAGGTTGTTTTTTTCCAGAAGGTTAAcc                                                                            <  1:2372530/100‑1 (MQ=255)
                acacCAGGTCCTGGAGATACTGCTGTTGTGGTGACCGATTGAGTAGCTGTGCTATAGATAGTGTAGGAGATTAGGTTGTTTTTTTCCTGAAGGTTAAcc                                                                            <  1:671681/99‑1 (MQ=255)
                acacCAGGTCCTGGAGAAACCGCTTTTGTGGTGACCAACATACGAGCGGCTCTATAGATAGTGTAGGAGATCAGGTTGTTTTTTTCCAGAAGGTTAACCa                                                                           <  2:848579/100‑1 (MQ=255)
                 cacCAGGTCCTGGAGAAACCGCTTTTGTGGTGACCAACATACGAGCGGCTCTATAGATAGTGTAGGAGATCAGGTTGTTTTTTTTCCAGAAGGTTAACCa                                                                           >  2:2161348/1‑100 (MQ=255)
                 cacCAGGTCCTGGAGAAACCGCTTTTGTGGTGACCAACATACGAGCGGCTCTATAGATAGTGTAGGAGATCAGGTTGTTTTTTTCCAGAAGGTTAACCAc                                                                          >  2:1695437/1‑100 (MQ=255)
                   ccAGGTCCTGGAGAAACCGCTTTTGTGGTGACCAACATACGAGCGGCTCTATAGATAGTGTAGGAGATCAGGTTGTTTTTTTCCAGAAGGTTAACCACTa                                                                        >  2:893667/1‑100 (MQ=255)
                     aGGTCCTGGAGAAACCGCTTTTGTGGTGACCAACATACGAGCGGCTCTATAGATAGTGTAGGAGATCAGGTTGTTTTTTTCCAGAAGGTTAACCACTATc                                                                      <  2:1804039/100‑1 (MQ=255)
                      ggTCCTGGAGAAACCGCTTTTGTGGTGACCAACATACGAGCGGCTCTATAGATAGTGTAGGAGATCAGGTTGTTTTTTTCCAGAAGGTTAACCACTATCa                                                                     >  1:3333258/1‑100 (MQ=255)
                       gTCCTGGAGAAACCGCTTTTGTGGTGACCAACATACGACCAGCTCTATAGATAGTGTAGGAGATCAGGTTGTTTTTTTCCAGAAGGTTATCCACTAt                                                                       <  1:573119/97‑1 (MQ=255)
                        tCCTGGAGAAACCGCTTTTGTGGTGACCAACATACGAGCGGCTCTATAGATAGTGTAGGAGATCAGGTTGTTTTTTTCCAGAAGGTTAACCACTATCAat                                                                   <  1:1188790/100‑1 (MQ=255)
                         ccTGGAGAAACCGCTTTTGTGGTGACCAACATACGAGCGGCTCTATAGATAGTGTAGGAGATCAGGTTGTTTTTTTCCAGAAGGTTAACCACTATCAata                                                                  >  2:1550256/1‑100 (MQ=255)
                         ccTGGAGAAACCGCTTTTGTGGTGACCAACATACGAGCGGCTCTATAGATAGTGTAGGAGATCAGGTTGTTTTTTTCCAGAAGGTTAACCACTATCAat                                                                   <  1:51369/99‑1 (MQ=255)
                           tGGAGAAACCGCTTTTGTGGTGACCAACATACGAGCGGCTCTATAGATAGTGTAGGAGATCAGGTTGTTTTTTTCCAGAAGGTTAACCACTATCAatata                                                                <  1:50839/100‑1 (MQ=255)
                            ggAGAAACCGCTTTTGTGGTGACCAACATACGAGCGGCTCTATAGATAGTGTAGGAGATCAGGTTGTTTTTTTCCAGAAGGTTAACCACTATCAatatat                                                               >  1:2058581/1‑100 (MQ=255)
                             gagaAACCGCTTTTGTGGTGACCAACATACGAGCGGCTCTATAGATAGTGTAGGAGATCAGGTTGTTTTTTTCCAGAAGGTTAACCACTATCAATATAtt                                                              >  2:102713/1‑100 (MQ=255)
                              agaAACCGCTTTTGTGGTGACCAACATACGAGCGGCTCTATAGATAGTGTAGGAGATCAGGTTGTTTTTTTCCAGAAGGTTAACCACTATCAATATATTc                                                             <  1:1902943/100‑1 (MQ=255)
                               gaAACCGCTTTTGTGGTGACCAACATACGAGCGGCTCTATAGATAGTGTAGGAGATCAGGTTGTTTTTTTCCAGAAGGTTAACCACTATCAATATATTCa                                                            <  2:1228481/100‑1 (MQ=255)
                               gaAACCGCTTTTGTGGTGACCAACATACGAGCGGCTCTATAGATAGTGTAGGAGATCAGGTTGTGTTTTTCCAGAAGGTTAACCACTATCAATATAtt                                                              >  1:2536257/1‑98 (MQ=255)
                               gaAACCGCTTTTGTGGTGACCAACATACGAGCGGCTCTATAGATAGTGGAGGAGATCAGGTTGTTTTTTTCCAGAAGGTTAATAACTATCAATATAtt                                                              >  1:2535144/1‑98 (MQ=255)
                                 aaCCGCTTTTGTGGTGACCAACATACGAGCGGCTCTATAGATAGTGTAGGAGATCAGGTTGTTTTTTTCCAGAAGGTTAACCACTATCAATATATTCATg                                                          <  1:831647/100‑1 (MQ=255)
                                    cGCTTTTGTGGTGACCAACATACGAGCGGCTCTATAGATAGTGTAGGAGATCAGGTTGTTTTTTTCCAGAAGGTTAACCACTATCAATATATTCATGTCg                                                       <  2:220/100‑1 (MQ=255)
                                      cTTTTGTGGTGACCAACATACGAGCGGCTCTATAGATAGTGTAGGAGATCAGGTTGTTTTTTTCCAGAAGGTTAACCACTATCAATATATTCATGTCGaa                                                     <  2:3476060/100‑1 (MQ=255)
                                      cTTTTGTGGTGACCAACATACGAGCGGCTCTATAGATAGTGTAGGAGATCAGGTTGTTTTTTTCCAGAAGGTTAACCACTATCAATATATTCATGTCGaa                                                     >  2:385617/1‑100 (MQ=255)
                                        tttGTGGTGACCAACATACGAGCGGCTCTATAGATAGTGTAGGAGATCAGGTTGTTTTTTTCCAGAAGGTTAACCACTATCAATATATTCATGTCGaaaa                                                   >  2:3294257/1‑100 (MQ=255)
                                           gtggtgACCAACATACGAGCGGCTCTATAGATAGTGTAGGAGATCAGGTTGTTTTTTTCCAGAAGGTTAACCACTATCAATATATTCATGTCGAAAAttt                                                >  2:3202623/1‑100 (MQ=255)
                                           gtggtgACCAACATACGAGCGGCTCTATAGATAGTGTAGGAGATCAGGTTGTTTTTTTCCAGAAGGTTAACCACTATCAATATATTCATGTCGAAAAttt                                                >  2:3039029/1‑100 (MQ=255)
                                            tggtgACCAACATACGAGCGGCTCTATAGATAGTGTAGGAGATCAGGTTGTTTTTTTCCAGAAGGTTAACCACTATCAATATATTCATGTCGAAAATTTg                                               <  2:135888/100‑1 (MQ=255)
                                            tggtgACCAACATACGAGCGGCTCTATAGATAGTGTAGGAGATCAGGTTGTTTTTTTCCAGAAGGTTAACCACTATCAATATATTCATGTCGAAAATTTg                                               <  2:575463/100‑1 (MQ=255)
                                             ggtgACCAACATACGAGCGGCTCTATAGATAGTGTAGGAGATCAGGTTGTTTTTTTCCAGAAGGTTAACCACTATCAATATATTCATGTCGAAAATTTGt                                              <  1:3178587/100‑1 (MQ=255)
                                              gtgACCAACATATGAGCGGCTCTATAGATAGTGTAGGAGATCAGGTTGTTTTTTTCCAGAAGGTTAACCACTATCAATATATTCATGTCGAAAATTTGtt                                             <  1:715045/100‑1 (MQ=255)
                                              gtgACCAACATACGAGCGGCTCTATAGATAGTGTAGGAGATCAGGTTGTTTTTTTCCAGAAGGTTAACCACTATCAATATATTCATGTCGAAAATTTGtt                                             <  2:2748617/100‑1 (MQ=255)
                                                gACCAACATACGAGCGGCACTATAGATAGTGTAGGAGATCAGGTTATTTTTTTCCAGAAGGTTAACAAATAACAAAATATGCAGGTCGAACATTTGttt                                            >  1:2224647/1‑99 (MQ=255)
                                                 nccAACATACGAGCGGCTCTATAGATAGTGTAGGAGATCAGGTTGTTTTTTTCCAGAAGGTTAACCACTATCAATATATTCATGTCGAAAATTTGTTTAt                                          >  2:3309225/2‑100 (MQ=255)
                                                 aCCAACATACGAGCGGCTCTATAGATAGTGTAGGAGATCAGGTTGTTTTTTTCCAGAAGGTTAACCACTATCAATATATTCATGTCGAAAATTTGTTTAt                                          >  2:365803/1‑100 (MQ=255)
                                                  ccAACATACGAGCGGCTCTATAGATAGTGTAGGAGATCAGGTTGTTTTTTTCCAGAAGGTTAACCACTATCAATATATTCATGTCGAAAATTTGTTTATc                                         >  2:2287797/1‑100 (MQ=255)
                                                  ccAACATACGAGCGGCTCTATAGATAGTGTAGGAGATCAGGTTGTTTTTTTCCAGAAGGTTAACCACTATCAATATATTCATGTCGAAAATTTGTTTATc                                         >  2:2467202/1‑100 (MQ=255)
                                                  ccAACATACGAGCGGCTCTATAGATAGTGTAGGAGATCAGGTTGTTTTTTTCCAGAAGGTTAACCACTATCAATATATTCATGTCGAAAATTTGTTTATc                                         >  2:970216/1‑100 (MQ=255)
                                                  ccAACATACGAGCGGCTCTATAGATAGTGTAGGAGATCAGGTTGTTTTTTTCCAGAAGGTTAACCACTATCAATATATTCATGTCGAAAATTTGTTTATc                                         >  1:1918730/1‑100 (MQ=255)
                                                  ccAACATACGAGCGGCTCTATAGATAGTGTAGGAGATCAGGTTGTTTTTTTCCAGAAGGTTAACCACTATCAATATATTCATGTCGAAAATTTGTTTATc                                         >  1:3401613/1‑100 (MQ=255)
                                                  ccAACATACGAGCGGCTCTATAGATAGTGTAGGAGATCAGGTTCTTTTTTTCCAGAAGGTTAACCACTATCAATATATTCATGTCGAAAATTTGTTTATc                                         <  1:2434492/100‑1 (MQ=255)
                                                   cAACATAAGAGCGGCTCTATAGATAGTGTAGGAGATCAGGTTGTTTTTTTCCAGAAGGTTAACCACTATCAATATATTCATGTCGAAAATTTGTTTATc                                         >  2:1982698/1‑99 (MQ=255)
                                                     aCATACGAGCGGCTCTATAGATAGTGTAGGAGATCAGGTTGTTTTTTTCCAGAAGGTTAACCACTATCAATATATTCATGTCGAAAATTTGTTTATCTaa                                      <  2:3000940/100‑1 (MQ=255)
                                                      cATACGAGCGGCTCTATAGATAGTGTAGGAGATCAGGTTGTTTTTTTCCAGAAGGTTAACCACTATCAATATATTCATGTCGAAAATTTGTTTATCTAAc                                     <  1:3278839/100‑1 (MQ=255)
                                                       aTACGAGCGGCTCTATAGATAGTGTAGGAGATCAGGTTGTTTTTTTCCAGAAGGTTAACCACTATCAATATATTCATGTCGAAAATTTGTTTATCTAACg                                    <  1:3414262/100‑1 (MQ=255)
                                                        tACGAGCGGCTCTATAGATAGTGTAGGAGATCAGGTTGTTTTTTTCCAGAAGGTTAACCACTATCAATATATTCATGTCGAAAATTTGTTTATCTAACGa                                   >  1:1185734/1‑100 (MQ=255)
                                                         aCGAGCGGCTCTATAGATAGTGTAGGAGATCAGGTTGTTTTTTTCCAGAAGGTTAACCACTATCAATATATTCATGTCGAAAATTTGTTTATCTAACGAg                                  <  1:1016015/100‑1 (MQ=255)
                                                         aCGAGCGGCTCTATAGATAGTGTAGGAGATCAGGTTGTTTTTTTCCAGAAGGTTAACCACTATCAATATATTCATGTCGAAAATTTGTTTATCTAACGAg                                  <  1:2092249/100‑1 (MQ=255)
                                                               ggCTCTATAGATAGTGTAGGAGATCAGGTTGTTTTTTTCCAGAAGGTTAACCACTATCAATATATTCATGTCGAAAATTTGTTTATCTAACGAGTAAGCa                            >  2:2037882/1‑100 (MQ=255)
                                                                gCTCTATAGATAGTGTAGGAGATCAGGTTGTTTTTTTCCAGAAGGTTAACCACTATCAATATATTCATGTCGAAAATTTGTTTATCTAACGAGTAAGCaa                           >  2:767126/1‑100 (MQ=255)
                                                                    tataGATAGTGTAGGAGATCAGGTTGTTTTTTTCCAGAAGGTTAACCACTATCAATATATTCATGTCGAAAATTTGTTTATCTAACGAGTAAGCAAGGCg                       <  1:1112325/100‑1 (MQ=255)
                                                                    tataGATAGTGTAGGAGATCAGGTTGTTTTTTTCCAGAAGGTTAACAACTATCAATATATTCATGTCGAAAATTTGTTTATCTAACGAGTAAGCAAGGCg                       >  2:1870061/1‑100 (MQ=255)
                                                                     atagatagTGTAGGAGATCAGGTTGTTTTTTTCCAGAAGGTTAACCACTATCAATATATTCATGTCGAAAATTTGTTTATCTAACGAGTAAGCAAGGCgg                      <  2:788939/100‑1 (MQ=255)
                                                                     atagatagTGTAGGAGATCAGGTTGTTTTTTTCCAGAAGGTTAACCACTATCAATATATTCATATCGAAAATTTGTTTATCTAACGAGTAAGCAAGGCgg                      >  2:43687/1‑100 (MQ=255)
                                                                      tagatagTGTAGGAGATCAGGTTGTTTTTTTTCTTAATTTTAACCACTATCAATATATTCATGTCGAAAATTTGTTTATCTAACGAGTAAGCAAg                          >  1:1091363/1‑95 (MQ=255)
                                                                      tagatagTGTAGGAGATCAGGTTGTTTTTTTCCAGAAGGTTAATCACTATCAATATATTCATGTCGAAAATTTGTTTATCTAACGAGTAAGCAAGGCg                       >  1:1100144/1‑98 (MQ=255)
                                                                       agatagTGTAGGAGATCAGGTTGTTTTTTTCCAGAAGGTTAACCACTATCAATATATTCATGTCGAAAATTTGTTTATCTAACGAGTAAGCAAGGCGGAt                    >  1:1997473/1‑100 (MQ=255)
                                                                        gatagTGTAGGAGATCAGGTTGTTTTTTTCCAGAAGGTTAACCACTATCAATATATTCATGTCGAAAATTTGTTTATCTAACGAGTAAGCAAGGCGGAtt                   >  2:2425214/1‑100 (MQ=255)
                                                                        gatagTGTAGGAGATCAGGTTGTTTTTTTCCAGAAGGTTAACCACTATCAATATATTCATGTCGAAAATTTGTTTATCTAACGAGTAAGCAAGGCGGAtt                   >  1:785534/1‑100 (MQ=255)
                                                                         atagTGTAGGAGATCAGGTTGTTTTTTTCCAGAAGGTTAACCACTATCAATATATTCATGTCGAAAATTTGTTTATCTAACGAGTAAGCAAGGCGGATTg                  <  2:2982872/100‑1 (MQ=255)
                                                                         atagTGTAGGAGATCAGGTTGTTTTTTGCGAGAAGGTTAACCACTATCAATATATTCATGTCGAAAATTTGTTTATCTAACGAGTAAGCAAGGCGGATTg                  <  1:779920/100‑1 (MQ=255)
                                                                          tagTGTAGGAGATCAGGTTGTTTTTTTCCAGAAGGTTAACCACTATCAATATATTCATGTCGAAAATTTGTTTATCTAACGAGTAAGCAAGGCGGATTGa                 >  1:1390764/1‑100 (MQ=255)
                                                                           agTGTAGGAGATCAGGTTGTTTTTTTCCAGAAGGTTAACCACTATCAATATATTCATGTCGAAAATTTGTTTATCTAACGAGTAAGCAAGGCGGATTGAc                <  1:1061700/100‑1 (MQ=255)
                                                                            gtgtAGGAGATCAGGTTGTTTTTTTTTTTTTTTTTTACCACTATCAATATATTCATGTCTTTTATTTGTTTATCTAACGAGTAAGCAAGGctgctt                   >  1:547180/1‑91 (MQ=255)
                                                                            gtgtAGGAGATCAGGTTGTTTTTTTCCAGAAGGTTAACCACTATCAATATATTCATGTCGAAAATTTGTTTATCTAACGAGTAAGCAAGGCGGATTGACg               <  1:1084543/100‑1 (MQ=255)
                                                                             tgtAGGAGATCAGGTTGTTTTTTTTCCAGAAGGTTAACCACTATCAATATATTCATGTCGAAAATTTGTTTATCTAACGAGTAAGCAAGGCGGATTGACg               <  1:2161339/100‑1 (MQ=255)
                                                                              gtAGGAGATCAGGTTGTTTTTTTCCAGAAGTTTAACCACTATCAATATATTCATGTCGAAAATTTGTTTATCTAACGAGTAAGCAAGGCGGATTGACg               >  1:1828109/1‑98 (MQ=255)
                                                                              gtAGGAGATCAGGTTGTTTTTTTCCAGAAGGTTAACCACTATCAATATATTCATGTCGAAAATTTGTTTATCTAACGAGTAAGCAAGGCGGATTGACgca             >  1:1828219/1‑98 (MQ=255)
                                                                              gtAGGAGATCAGGTTGTTTTTTTCCAGAAGGTTAACCACTATCAATATATTCATGTCGAAAATTTGTTTATCTAACGAGTAAGCAAGGCGGATTGACGGa             >  2:2777650/1‑100 (MQ=255)
                                                                                aGGAGATCAGGTTGTTTTTTTCCAGAAGGTTAACCACTATCAATATATTCATGTCGAAAATTTGTTTATCTAACGAGTAAGCAAGGCGGATTGACGGatc           >  1:1368977/1‑100 (MQ=255)
                                                                                  gagaTCAGGTTGTTTTTTTCCAGAAGGTTAACCACTATCAATATATTCATGTCGAAAATTTGTTTATCTAACGAGTAAGCAAGGCGGATTGACGGatcat         <  2:732206/100‑1 (MQ=255)
                                                                                  gagaTCAGGTTGTTTTTTTCCAGAAGGTTAACCACTATCAATATATTCATGTCGAAAATTTGTTTATCTAACGAGTAAGCAAGGCGGATTGACGGatcat         <  2:564989/100‑1 (MQ=255)
                                                                                    gaTCAGGTTGTTTTTTTCCAGAAGGTTAACCACTATCAATATATTCATGTCGAAAATTTGTTTATCTAACGAGTAAGCAAGGCGGATTGACGGATCATcc       <  1:861593/100‑1 (MQ=255)
                                                                                    gaTCAGGTTGTTTTTTTCCAGAAGGTTAACCACTATCAATATATTCATGTCGAAAATTTGTTTATCTAACGAGTAAGCAAGGCGGATTGACGGATCATcc       <  2:2900415/100‑1 (MQ=255)
                                                                                     aTCAGGTTGTTTTTTTCCAGAAGGTTAACCACTATCAATATATTCATGTCGAAAATTTGTTTATCTAACGAGTAAGCAAGGCGGATTGACGGATCATCCg      >  2:271636/1‑100 (MQ=255)
                                                                                      tCAGGTTGTTTTTTTCCAGAAGGTTAACCACTATCAATATATTCATGTCGAAAATTTGTTTATCTAACGAGTAAGCAAGGCGGATTGACGGATCATCCgg     >  2:2905232/1‑100 (MQ=255)
                                                                                      tCAGGTTGTTTTTTTCCAGAAGGTTAACCACTATCAATATATTCATGTCGAAAATTTGTTTATCTAACGAGTAAGCAAGGCGGATTGACGGATCATCCgg     <  1:750978/100‑1 (MQ=255)
                                                                                       cAGGTTGTTTTTTTCCAGAAGGTTAACCACTATCAATATATTCATGTCGAAAATTTGTTTATCTAACGAGTAAGCAAGGCGGATTGACGGATCATCCggg    >  2:1333580/1‑100 (MQ=255)
                                                                                         ggTTGTTTTTTTCCAGAAGGTTAACCACTATCAATATATTCATGTCGAAAATTTGTTTATCTAACGAGTAAGCAAGGCGGATTGACGGATCATCCGGGTc  <  2:1701131/100‑1 (MQ=255)
                                                                                           ttgttTTTTTTCAGAAAGTTAACCACTATCAATAAAGTCAAGGGGAAAATTTGGTTATGTAACGAGTGAGCCAGGCTGTTTGTCgg              >  1:2869775/1‑86 (MQ=255)
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CGCTGCCAATCAGTTAACACCAGGTCCTGGAGAAACCGCTTTTGTGGTGACCAACATACGAGCGGCTCTATAGATAGTGTAGGAGATCAGGTTGTTTTTTTTCCAGAAGGTTAACCACTATCAATATATTCATGTCGAAAATTTGTTTATCTAACGAGTAAGCAAGGCGGATTGACGGATCATCCGGGTC  >  NC_000913/3639778‑3639967

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: