| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 3,648,144 | (T)7→6 | 100% | intergenic (‑356/‑384) | dinQ ← / → arsR | UV‑inducible membrane toxin, DinQ‑AgrB type I toxin‑antitoxin system/arsenical resistance operon transcriptional repressor; autorepressor |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,648,138 | 0 | T | . | 96.5% | 483.5 / 9.3 | 114 | intergenic (‑350/‑390) | dinQ/arsR | UV‑inducible membrane toxin, DinQ‑AgrB type I toxin‑antitoxin system/arsenical resistance operon transcriptional repressor; autorepressor |
| Reads supporting (aligned to +/- strand): ref base T (2/2); new base . (53/57); total (55/59) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.55e-01 | |||||||||||
Only 100 of 131 total aligned reads displayed.
AGTATGGTATTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGGTTTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGATATATACCGAAGTGCTCCCTCC > NC_000913/3648040‑3648233 | aGTATGGTATTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGGtt > 1:3469978/1‑100 (MQ=255) tATGGTATTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGGtttt < 2:2956622/100‑1 (MQ=255) tATGGTATTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGGtttt < 1:576988/100‑1 (MQ=255) aTGGTATTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGGttttt < 2:1536726/100‑1 (MQ=255) tGGTATTATCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTTGAAAGTAAAAAACCGACTTTGCGTCGGtttttt < 1:490339/100‑1 (MQ=21) tGGTATTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGGtttttt > 2:63852/1‑100 (MQ=255) tGGTATTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGGtttttt < 2:2520711/100‑1 (MQ=255) tGGTATTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGGtttttt < 2:2909848/100‑1 (MQ=255) ggTATTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGGtttttta > 2:777089/1‑99 (MQ=255) ggTATTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGGtttttta < 2:544574/100‑2 (MQ=255) ggTATTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGGtttttta > 2:1799169/1‑99 (MQ=255) gTATTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGGttttttac > 2:3764027/1‑98 (MQ=255) tATTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGGttttttt > 1:615696/1‑98 (MQ=255) tATTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGCCTGGAAAGTAAAAAACCGACGCAAAGTCGGttttttaca > 1:2667163/1‑97 (MQ=255) aTTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGGttttttacat > 2:3221870/1‑96 (MQ=255) tAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATcc < 2:2636171/100‑1 (MQ=255) aGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATcc > 2:265517/1‑99 (MQ=255) aGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCg > 2:2548354/1‑100 (MQ=255) aGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCg < 2:93450/100‑1 (MQ=255) aGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCg > 2:3780436/1‑100 (MQ=255) gCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCgg > 2:1596314/1‑100 (MQ=255) gCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCgg < 1:2868890/100‑1 (MQ=255) aTTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGAt < 2:299914/100‑1 (MQ=255) aTTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGAt < 2:2171609/100‑1 (MQ=255) ttGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGAtt > 2:1315025/1‑100 (MQ=255) ttGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGAtt < 1:1200333/100‑1 (MQ=255) gATGCGTTAGATGATGGCTATCTCATGCCAGTCAGAGCTACCAACTCAGTGCTGGAAACTAAAAAACCTACGCCAATTCGG‑TTTTTTACATCCGGATTCg < 1:3468830/100‑1 (MQ=255) gATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCTAAGTCGG‑TTTTTTACATCCGGATTCg < 2:2310189/100‑1 (MQ=255) gATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCg < 2:488590/100‑1 (MQ=255) gATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCg > 2:3621901/1‑100 (MQ=255) gATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCg > 2:2727622/1‑100 (MQ=255) tGCGTTAGATGATGGCGATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGa < 1:1369203/100‑1 (MQ=255) gTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGGTTTTTTAACTTc > 1:3260243/1‑88 (MQ=255) ttAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAg < 2:2449950/100‑1 (MQ=255) ttAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAg < 2:3017763/100‑1 (MQ=255) tgatgGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCttn < 1:3725702/100‑2 (MQ=255) tgatgGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTa > 2:1889124/1‑100 (MQ=255) gatgGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACAGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTaa > 1:3109219/1‑100 (MQ=255) atgGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAat < 2:2216174/100‑1 (MQ=255) atgGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAat < 2:795837/100‑1 (MQ=255) tgGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTAAATTCGGATTCCAAAAAGGCATAat > 1:385679/1‑99 (MQ=14) ggCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAata > 2:3123163/1‑99 (MQ=255) gCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATg < 2:1938827/100‑1 (MQ=255) cTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGa > 1:1091292/1‑100 (MQ=255) cTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGa > 1:1376493/1‑100 (MQ=255) tATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGGTTTTTTTACATCCGGATTCGGACAAGGCTTAATATGa < 1:311570/100‑1 (MQ=255) tATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGat < 1:353599/100‑2 (MQ=255) tATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGAc < 2:2350396/100‑1 (MQ=255) ctcACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGAt < 2:560229/100‑1 (MQ=255) ctcACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑GTTTTTAGATCCGGATTCGGACAAGGCTTAATATGACGAt > 1:2663976/1‑100 (MQ=21) tgaccccAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATg < 2:2983080/95‑1 (MQ=255) cACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGa > 2:810753/1‑100 (MQ=255) cACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGa > 2:2431837/1‑100 (MQ=255) ccAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGCCCCa > 2:1409071/1‑100 (MQ=255) cAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGGTTTTTTTACATCCGGATTCGGACAACCCTTAATATGACTATGcccc > 1:2012446/1‑99 (MQ=18) cAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAg > 2:89165/1‑100 (MQ=255) gTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑ATTTTTACATACGGATTCGGACAAGGCTTAATATGACGATGACCCAGTg > 1:1106368/1‑100 (MQ=25) tCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGa < 2:690816/100‑1 (MQ=255) gagCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAg < 2:3726478/100‑1 (MQ=255) gagCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAg < 2:2417800/100‑1 (MQ=255) gagCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAg < 2:2981498/100‑1 (MQ=255) gagCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAg < 1:26101/100‑1 (MQ=255) gCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGta > 2:2914454/1‑100 (MQ=255) gCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGta > 2:2810131/1‑100 (MQ=255) ccaccaACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGtat < 1:3621873/100‑1 (MQ=255) caccaACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGtata < 2:3797758/100‑1 (MQ=255) accaACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGtatat < 2:3480651/100‑1 (MQ=255) accaACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGtatat < 2:1836390/100‑1 (MQ=255) aaCTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATaaa < 1:2760767/100‑1 (MQ=255) aaCTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATaa < 1:1075619/99‑1 (MQ=255) aCTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACCTTCCTAATCGGAAAAGCCTTAATATGAAGAAGCCCCAGCAAAAGTATaaaa > 1:271185/1‑98 (MQ=9) aCTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTACTATGACGATGACCCAGTGAAAGTATATaaa > 2:1192877/1‑99 (MQ=255) aCTCAGGGCTGGAAAATAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAAt < 2:2759773/100‑1 (MQ=255) cTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATc < 2:1506260/100‑1 (MQ=255) cAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGt > 1:1537410/1‑100 (MQ=255) cAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGt > 2:1328614/1‑100 (MQ=255) aGGGCTGGATAGTTATTAATCGACGCAAAGCCGG‑TTTTTTATATCCGGATGCAGACAAGTCTCATTATGACGATGACCCAGTGAAAGTATATAAATCGTc < 1:996611/100‑1 (MQ=255) gggCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCa < 1:1799796/100‑1 (MQ=255) gCTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGATTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACt > 2:1742663/1‑100 (MQ=255) cTGGAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTg < 1:2836231/100‑1 (MQ=255) ggAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCg > 2:3449051/1‑100 (MQ=255) ggAAAGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCg > 2:1670837/1‑100 (MQ=255) ggatgTAAAATACCGACTCTGCGTCGG‑TTTTTTACATCCGGATTCGGTCAAGGCTTAATATGACGATGAACCAGTGAAAGTATATAAATTGTGGCTGCGa > 1:2805067/5‑100 (MQ=255) aaaGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGat < 2:3569875/100‑1 (MQ=255) aaaGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGat > 2:366497/1‑100 (MQ=255) aaaGTAAAAAACCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGat < 2:1376498/100‑1 (MQ=255) aaaaaaCCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGAtatata > 2:3131907/1‑100 (MQ=255) aaaaaaCCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGAtatata < 2:2344119/100‑1 (MQ=255) aaaaaaCCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGAtatata > 1:858880/1‑100 (MQ=255) aaaaCCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGATATATAcc > 1:2889885/1‑100 (MQ=255) aaaaCCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGATATATAcc > 2:1374763/1‑100 (MQ=255) aCCGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGAGGATGACCCAGGGAAAGTATATAAATCGTCACTGCGATATATACCg > 2:935615/1‑98 (MQ=255) ccGACGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGATATATACCGAAg < 2:2081197/100‑1 (MQ=255) gACGCAAAGGCGGTTTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGATATATACCGAAGt < 2:3613077/100‑1 (MQ=255) cGCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGATATATACCGAAGTGct > 2:666196/1‑100 (MQ=255) gCAAAGTCGG‑TTTTTTACATCCGGATTCGGACAATGCTTAATATGACGATTACCCAGTGAAAGTATATAAATCGTCACTGCGATATATACCGAAGTGctc < 1:3331649/100‑1 (MQ=255) ataGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGATATATACCGAAGTGctccc < 1:870547/98‑1 (MQ=255) aaaGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGATATATACCGAAGTGctccc < 2:1369813/100‑1 (MQ=255) aaGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGATATATACTGAAGTGctccct > 1:378176/1‑100 (MQ=255) aaGTCGG‑TTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGATATATACCGAAGTGctccc < 1:3214179/99‑1 (MQ=255) | AGTATGGTATTAGCATTGATGCGTTAGATGATGGCTATCTCACTCCAGTCAGAGCCACCAACTCAGGGCTGGAAAGTAAAAAACCGACGCAAAGTCGGTTTTTTTACATCCGGATTCGGACAAGGCTTAATATGACGATGACCCAGTGAAAGTATATAAATCGTCACTGCGATATATACCGAAGTGCTCCCTCC > NC_000913/3648040‑3648233 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |