| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 2,809,774:1 | (T)7→8 | 100% | coding (158/738 nt) | ygaZ → | putative L‑valine exporter, norvaline resistance protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,809,767 | 1 | . | T | 94.1% | 374.5 / 15.3 | 118 | coding (151/738 nt) | ygaZ | putative L‑valine exporter, norvaline resistance protein |
| Reads supporting (aligned to +/- strand): ref base . (4/3); new base T (53/55); total (60/58) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.17e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 140 total aligned reads displayed.
TGCAAAGACAGTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑G‑T‑TT‑TTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTTGTGGATTGCTGCACT > NC_000913/2809671‑2809858 | tGCAAAGACAGTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑G‑t‑tt > 2:3442144/1‑100 (MQ=255) gCAAAGACAGTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑G‑t‑tt‑t > 2:2483859/1‑100 (MQ=255) gCAAAGACAGTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑G‑t‑tt‑t < 1:3264214/100‑1 (MQ=255) aaGACAGTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACTCGTCTGGGATTCTCTCCTCTCGAAAGC‑G‑t‑tt‑tttt < 1:790626/100‑1 (MQ=255) aaGACAGTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑G‑t‑tt‑tttt > 2:1011106/1‑100 (MQ=255) aCAGTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑G‑t‑tt‑tttttct < 2:1568563/100‑4 (MQ=255) cAGTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑G‑t‑tt‑tttttctc < 2:1710449/100‑5 (MQ=255) cAGTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑G‑t‑tt‑tttttctc > 1:551796/1‑96 (MQ=255) cAGTTTACCGATTGTTATTAGTGATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑G‑t‑tt‑tttttctc > 1:2200057/1‑96 (MQ=255) aGTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑G‑t‑tt‑tttttctcc < 1:1292995/100‑6 (MQ=255) aGTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑G‑t‑tt‑tttttctcc < 1:1134820/100‑6 (MQ=255) gTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GTT‑TT‑TTTTCTCCt < 1:3202454/100‑1 (MQ=255) tttACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GTT‑TT‑TTTTCTCCTg > 2:833351/1‑100 (MQ=255) tttACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GTT‑TT‑TTTTCTCCTg > 1:505505/1‑100 (MQ=255) tttACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑G‑t‑tt‑tttttcttctg > 1:3579239/1‑93 (MQ=255) tACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GTT‑TT‑TTTTCTCCTGca < 1:3654772/100‑1 (MQ=255) ccGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GTT‑TT‑TTTTCTCCTGcat > 1:355257/1‑99 (MQ=255) ccGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GAT‑TT‑TTTTCTCTTGcat > 1:2566652/1‑99 (MQ=255) tGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GTT‑TT‑TTTTCTCCTGCATCATTTa < 2:2288699/100‑1 (MQ=255) tGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GTT‑TT‑TTTTCTCCTGCATCATTTa < 2:224781/100‑1 (MQ=255) tGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTATGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GTT‑TT‑TTTTCTCCTGCATCtttt > 1:97502/1‑99 (MQ=255) gTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GTT‑TT‑TTTTCTCCTGCATCATTTAt < 2:1747377/100‑1 (MQ=255) gTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GTT‑TT‑TTTTCTCCTGCATCATTTAt > 2:547878/1‑100 (MQ=255) ttattaGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GTT‑TT‑TTTTCTCCTGCATCATTTATg < 1:11591/100‑1 (MQ=255) ttattaGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GTT‑TT‑TTTTCTCCTGCATCATTTATg < 2:799362/100‑1 (MQ=255) ttattaGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GTT‑TT‑TTTTCTCCTGCATCATTTATg < 2:3456728/100‑1 (MQ=255) ttattaGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GTT‑TT‑TTTTCTCCTGCATCATTTATg < 1:3078137/100‑1 (MQ=255) ttattaGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑G‑T‑TT‑TTTTCTCCTGCATCATTTATGc > 1:2786879/1‑100 (MQ=255) tattaGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTGTCGAAAGC‑G‑T‑TTATTTTCTCCTGCATCTTTTATg > 1:1212898/1‑99 (MQ=255) tattaGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GTT‑TT‑TTTTCTCCTGCATCATTTATGc > 2:1579385/1‑100 (MQ=255) attaGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GTT‑TT‑TTTTCTCCTGCATCATTTATGCa < 2:89152/100‑1 (MQ=255) ttaGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGAGCAGTCTGGGATTCTCTCCTCTCGAAAGC‑GTT‑TT‑TTTTCTCCTGCATCATTTAttc > 1:396284/1‑96 (MQ=255) ttaGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GTT‑TT‑TTTTCTCCTGCATCATTTATGCAg < 2:1258067/100‑1 (MQ=255) taGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GTT‑TT‑TTTTCTCCTGCATCATTTATGCAgg > 1:2389199/1‑100 (MQ=255) aGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GTT‑TT‑TTTTCTCCTGCATCATTTATGCAGgc > 2:1447851/1‑100 (MQ=255) aGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GTT‑TT‑TTTTCTCCTGCATCATTTATGCAGgc > 2:2939164/1‑100 (MQ=255) gTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GTT‑TT‑TTTTCTCCTGCATCATTTATGCAGgcg > 1:1911818/1‑100 (MQ=255) gTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GTT‑TT‑TTTTCTCCTGCATAAATGATGCAggag < 2:3245680/100‑3 (MQ=255) ttATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GTT‑TT‑TTTTCTCCTGCATCATTTATGCAGgcgc < 1:2194405/100‑1 (MQ=255) tataTTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GTT‑TT‑TTTTCTCCTGCATCATTTATGCAGGcgcg < 1:2939960/100‑1 (MQ=255) tataTTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GTT‑TT‑TTTTCTCCTGCATAAATGATGCAggagaa < 2:3694363/100‑5 (MQ=255) tataTGCCGGGGGCCTTTGCGTTCTGTCTGAATTCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑G‑T‑TTGTTTTCTCCTGCATAAATGATGCAggag < 1:2768516/98‑3 (MQ=255) ccGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GTT‑TT‑TTTTCTCCTGCATCATTCATGCAGGCTCGAGCCAg > 1:988893/1‑100 (MQ=255) ggTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GTT‑TT‑TTTTCTCCTTCATCATTTATCCAGGCGCGAGCCAGtt > 1:541749/1‑100 (MQ=255) ggTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GTT‑TT‑TTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGtt > 2:1399402/1‑100 (MQ=255) ggCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GTT‑TT‑TTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGt < 1:880814/100‑1 (MQ=255) gCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GTT‑TT‑TTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTc < 1:3021096/100‑1 (MQ=255) ccTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GTT‑TT‑TTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCa > 2:1632869/1‑100 (MQ=255) tttGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GTT‑TT‑TTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCAtt < 2:2546182/100‑1 (MQ=255) ttGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GTT‑TT‑TTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTa > 2:1913003/1‑100 (MQ=255) tGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GTT‑TT‑TTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTAc < 1:3198447/100‑1 (MQ=255) gCGTTCGGTCTGAATGCGTCCCGTCTGGTATTCTCTCCTCTCGAAAGC‑GTT‑TT‑TTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTAcc < 1:3162743/100‑1 (MQ=255) gTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GTT‑TT‑TTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACcgc < 2:3076558/100‑1 (MQ=255) gTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GTT‑TT‑TTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACcgc < 1:1774506/100‑1 (MQ=255) gTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GTT‑TT‑TTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACcgc < 2:671402/100‑1 (MQ=255) cGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GTT‑TT‑TTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGAt < 1:367966/100‑1 (MQ=255) ggTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GTT‑TT‑TTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATg > 1:2460932/1‑100 (MQ=255) ggTCTGAATGCGACCCGTCTGGAATACTCTAGTATCGAAGGC‑G‑TGCT‑ATTGCTGCGGGATGATTTGTGCAGGCGAGAGCAAGTTGGTTAttctatcgacg > 1:2316014/1‑91 (MQ=255) cTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GTT‑TT‑TTTTTTTTTTTTTTTTTTATGCAGGCGCGAGCCAGTTCTTCTTTACCGCGATGCt > 1:1211933/1‑99 (MQ=255) cTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GTT‑TT‑TTTTTTTTTTTTTCATTTATGCAGGCGCGAGCCAGTTTTTCATTACCGCGATGCTg > 1:439339/1‑100 (MQ=255) cTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GTT‑TT‑TTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTg < 2:3106992/100‑1 (MQ=255) tGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GTT‑TT‑TTTTCTCCTCCATCATTTATGCAGGCGCGAGCCCGTTCGTCATTACCTCGATGCTg > 1:1131814/1‑99 (MQ=255) tGAATGCGACCCGTCTGGGATTCTCTACTCTCGAAAGC‑GTT‑TT‑TTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTgg > 2:2318221/1‑100 (MQ=255) gAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GTT‑TT‑TTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTgg > 2:333653/1‑99 (MQ=255) gAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GTT‑TT‑TTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTgg > 1:2950398/1‑99 (MQ=255) gAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GTT‑TT‑TTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTg > 1:688830/1‑98 (MQ=255) gAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GTT‑TT‑TTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGc > 2:3024158/1‑100 (MQ=255) gAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GTT‑TT‑TTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGc > 2:1253413/1‑100 (MQ=255) aaTGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GTT‑TT‑TTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCa < 2:2694779/100‑1 (MQ=255) aaTGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GTT‑TT‑TTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCa < 2:3708692/100‑1 (MQ=255) aaTGCGACCCCTCTGAGATTCTCTCCTCTCGAAAGC‑GTT‑TT‑TTTTCTCCTGCATCATGTATGCAGGCGCGAGCCACTTCGTCATTACCGCGATGCTGGc < 1:2579399/99‑1 (MQ=255) cGATCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GTT‑TT‑TTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCg > 2:1056757/1‑100 (MQ=255) cGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GTT‑TT‑TTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCg > 2:3107812/1‑100 (MQ=255) cGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GTT‑TT‑TTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCg > 1:3499083/1‑100 (MQ=255) gACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GTT‑TT‑TTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCgg < 2:3775878/100‑1 (MQ=255) aCCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GTT‑TT‑TTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCggg < 2:1307946/100‑1 (MQ=255) aCCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GTT‑TT‑TTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCggg < 1:2142830/100‑1 (MQ=255) aCCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GTT‑TT‑TTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCggg < 2:1804581/100‑1 (MQ=255) aCCCGTCTGGGATTCTCTCCTCTCGAAAGC‑GTT‑TT‑TTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCggg < 2:1737245/100‑1 (MQ=255) cccGTCTGGGATTTTCTCCTCTCGAACGC‑GTT‑TT‑TTTTCTCCGGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGcc < 1:2719171/96‑1 (MQ=255) gTCTGGGATTCTCTCCTCTCGAAAGC‑GTT‑TT‑TTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGagta > 2:445281/1‑100 (MQ=255) cTGGGATTCTCTCCTCTCGAAAGC‑GTT‑TT‑TTTTTTTTTTTTTCATTTATGCAGGCGCGAGCCCGTTTGTCATTACCGCGATTCTGGCAGCCGGGagtag > 1:2015927/1‑99 (MQ=255) cTGGGATTCTCTCCTCTCGAAAGC‑GTT‑TT‑TTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGagtagt < 2:2362103/100‑1 (MQ=255) cTGGGATTCTCTCCTCTCGAAAGC‑GTT‑TT‑TTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGagtagt > 2:2595564/1‑100 (MQ=255) cTGGGATTCTCTCCTCTCGAAAGC‑GTT‑TT‑TTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGagtagt > 2:1679158/1‑100 (MQ=255) tGGGATTCTCTCCTCTCGAAAGC‑GTT‑TT‑TTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGagta > 2:2531650/1‑97 (MQ=255) ggATTCTCTCCTCTCGAAAGC‑GTT‑TT‑TTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGttt > 1:2011669/1‑99 (MQ=255) ggATTCTCTCCTCTCGAAAGC‑GTT‑TT‑TTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTtg < 1:1822510/100‑1 (MQ=255) ttCTCTCCTCTCGAAAGC‑GTT‑TT‑TTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTTGTgg < 1:2191903/100‑1 (MQ=255) tcgctcctctcGAAAGC‑GTT‑TT‑TTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTTGTgg < 1:1131259/96‑1 (MQ=255) ctctcctctcGAAAGCGG‑T‑TT‑TTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTTGTGGAt < 1:3240691/100‑1 (MQ=255) ctctcctctcGAAAGC‑GTT‑TT‑TTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTTGTgg > 1:1473006/1‑98 (MQ=255) ctctcctctcGAAAGC‑GTT‑TT‑TTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTTGTGGAt > 2:3703085/1‑100 (MQ=255) tcctctcGAAAGC‑GTT‑TT‑TTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTTGTGGATtgc < 1:1011101/100‑1 (MQ=255) cctctcGAAAGC‑GTT‑TT‑TTTTTTTTTTTTTCATTTATGCAGGCGCGAGCCAGTTTTTCATTACCGCGATGCTGGCAGCTGGGCGTATTTTGTGGactcc > 1:1216222/1‑95 (MQ=255) cctctcGAAAGC‑GTT‑TT‑TTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTTGTGGATtgct < 2:3499110/100‑1 (MQ=255) cctctcGAAAGC‑GTT‑TT‑TTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTTGTGGATtgct > 2:1508750/1‑100 (MQ=255) ctctcGAAAGC‑GTT‑TT‑TTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTTGTGGATtgc < 1:3292688/98‑1 (MQ=255) tcGAAAGC‑GTT‑TT‑TTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTTGTGGATTGCTGCAc < 2:2622326/100‑1 (MQ=255) aaaGC‑GTT‑TT‑TTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTTATTACCGCGATGCTGGCAGCCGGGAGTAGTTTGTGGATtgat > 1:2198418/1‑91 (MQ=255) | TGCAAAGACAGTTTACCGATTGTTATTAGTTATATTCCGGTGGCCTTTGCGTTCGGTCTGAATGCGACCCGTCTGGGATTCTCTCCTCTCGAAAGC‑G‑T‑TT‑TTTTCTCCTGCATCATTTATGCAGGCGCGAGCCAGTTCGTCATTACCGCGATGCTGGCAGCCGGGAGTAGTTTGTGGATTGCTGCACT > NC_000913/2809671‑2809858 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |