| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 3,333,582:1 | (A)8→9 | 100% | intergenic (‑131/‑128) | rplU ← / → ispB | 50S ribosomal subunit protein L21/octaprenyl diphosphate synthase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,333,574 | 1 | . | A | 89.2% | 315.1 / 31.6 | 102 | intergenic (‑123/‑136) | rplU/ispB | 50S ribosomal subunit protein L21/octaprenyl diphosphate synthase |
| Reads supporting (aligned to +/- strand): ref base . (4/7); new base A (42/49); total (46/56) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.50e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 118 total aligned reads displayed.
CTTTTCAATGATTCAGAGTGCGCTATAAATATTCACAATAGGGCGCGAATATTACGCAAAACGCACGCCTTTGACAAGTGCTACAGTCAATAC‑ACG‑AAG‑AAAAAAAA‑CACAACTTGTACGGTAACGTTTATCTGTGCCATTTTTTCAGTACAATCACCCTATATTCCTAACCATAAACCCTAAGTTGCCTTTGTTC > NC_000913/3333476‑3333671 | ttttCAATGATTCAGAGTGCGCTATAAATATTCACAATAGGGCGCGAATATTACGCAAAACGCACGCCTTTGACAAGTGCTACAGTCAATAC‑ACg‑aag‑aa > 2:1523539/1‑100 (MQ=255) tttCAATGATTCAGAGTGCGCTATAAATATTCACAATAGGGCGCGAATATTACGCAAAACGCACGCCTTTGACAAGTGCTACAGTCAATAC‑ACG‑AAG‑aaa > 1:3385839/1‑100 (MQ=255) ttCAATGATTCAGAGTGCGCTATAAATATTCACAATAGGGCGCGAATATTACGCAAAACGCACGCCTTTGACAAGTGCTACAGTCAATAC‑ACG‑AAG‑aaaa > 2:89749/1‑100 (MQ=255) tCAATGATTCAGAGTGCGCTATAAATATTCACAATAGGGCGCGAATATTACGCAAAACGCACGCCTTTGACAAGTGCTACAGTCAATAC‑ACG‑AAG‑aaaaa < 2:412372/100‑1 (MQ=255) cAATGATTCAGAGTGCGCTATAAATATTCACAATAGGGCGCGAATATTACGCAAAACGCACGCCTTTGACAAGTGCTACAGTCAATAC‑ACG‑AAG‑aaaaaa < 2:2367349/100‑1 (MQ=255) cAATGATTCAGAGTGCGCTATAAATATTCACAATAGGGCGCGAATATTACGCAAAACGCACGCCTTTGACAAGTGCTACAGTCAATAC‑ACG‑AAG‑aaaaaa > 1:1954043/1‑100 (MQ=255) cAATGATTCAGAGTGCGCTATAAATATTCACAATAGGGCGCGAATATTACGCAAAACGCACGCCTTTGACAAGTGCTACAGTCAATAC‑ACG‑AAG‑aaaaaa > 1:2619299/1‑100 (MQ=255) aaTGATTCAGAGTGCGCTATAAATATTCACAATAGGGCGCGAATATTACGCAAAACGCACGCCTTTGACAAGTGCTACAGTCAATAC‑ACG‑AAG‑aaaaaaa > 2:3067917/1‑100 (MQ=255) aaTGATTCAGAGTGCGCTATAAATATTCACAATAGGGCGCGAATATTACGCAAAACGCACGCCTTTGACAAGTGCTACAGTCAATAC‑ACA‑AAG‑aaaaaaa < 1:955656/100‑1 (MQ=255) aaTGATTCAGAGTGCGCTATAAATATTCACAATAGGGCGCGAATATTACGCAAAACGCACGCCGTTGACAAGTGCTACAGTCAATAC‑ACG‑AAG‑aaaaaaa > 2:2663144/1‑100 (MQ=255) aTGATTCAGAGTGCGCTATAAATATTCACAATAGGGCGCGAATATTACGCAAAACGCACGCCTTTGACAAGTGCTACAGTCAATAC‑ACG‑AAG‑aaaaaaaa < 2:2504022/100‑1 (MQ=255) tGATTCAAAGTGCGCTATAAATATTCACAATAGGGCGCAAATATTACGCAAAACGCACGCCTTTGACAAGTGCTACAGTCAATAC‑ACA‑AAG‑aaaaaaaa < 1:3800263/99‑1 (MQ=255) aTTCAGAGTGCGCTATAAATATTCACAATAGGGCGCGAATATTACGCAAAACGCACGCCTTTGACAAGTGCTACAGTCAATAC‑ACG‑AAG‑aaaaaaaaaca > 1:372149/1‑97 (MQ=255) aTTCAGAGTGCGCTATAAATATTCACAATAGGGCGCGAATATTACGCAAAACGCACGCCTTTGACAAGTGCTACAGTCAATAC‑ACG‑AAG‑AAAAAAAa‑aac < 2:278822/100‑1 (MQ=255) cAGAGTGCGCTATAAATATTCACAATAGGGCGCGAATATTACGCAAAACGCACGCCTTTGACAAGTGCTACAGTCAATAC‑ACG‑AAGAAAAAAAAA‑CACaa > 1:2117593/1‑100 (MQ=255) gTGCGCTATAAATATTCACAATAGGGCGCGAATATTACGCAAAACGCACGCCTTTGACAAGTGCTACAGTCAATAC‑ACG‑AAGAAAAAAAAA‑CACAACtt > 1:2697955/1‑99 (MQ=255) cgcTATAAATATTCACAATAGGGCGCGAATATTACGCAAAACGCACGCCTTTGACAAGTGCTACAGTCAATAC‑ACG‑AAGAAAAAAAAA‑CACAACTTGTAc < 2:3352905/100‑1 (MQ=255) cTATAAATATTCACAATAGGGCGCGAATATTACGCAAAACGCACGCCTTTGACAAGTGCTACAGTCAATAC‑ACG‑AAGAAAAAAAAA‑CACAACTTGTa > 1:2057087/1‑97 (MQ=255) aaTATTCACAATAGGGCGCGAATATTACGCAAAACGCACGCCTTTGACAAGTGCTACAGTCAATAC‑ACG‑AAGAAAAAAAAA‑CACAACTTGTACGGTAACg < 2:1563196/100‑1 (MQ=255) aaTATTCACAATAGGGCGCGAATATTACGCAAAACGCACGCCTTTGACAAGTGCTACAGTCAATAC‑ACG‑AAGAAAAAAAAA‑CACAACTTGTACGGTAACg < 2:944217/100‑1 (MQ=255) tatTCACAATAGGGCGCGAATATTACGCAAAACGCACGCCTTTGACAAGTGCTACAGTCAATAC‑ACG‑AAGAAAAAAAAA‑CACAACTTGTACGGTAACGtt < 2:228015/100‑1 (MQ=255) atTCACAATAGGGCGCGAATATTACGCAAAACGCACGCCTTTGACAAGTGCTACAGTCAATAC‑ACG‑AAGAAAAAAAAA‑CACAACTTGTACGGTAACGttt > 2:3593000/1‑100 (MQ=255) atTCACAATAGGGCGCGAATATTACGCAAAACGCACGCCTTTGACAAGTGCTACAGTCAATAC‑ACG‑AAGAAAAAAAAA‑CACAACTTGTACGGTAACGttt > 1:2839358/1‑100 (MQ=255) ttCACAATAGGGCGCGAATATTACGCAAAACGCACGCCTTTGACAAGTGCTACAGTCAATAC‑ACG‑AAGAAAAAAAAA‑AACAACTTGTACGTTAACGt > 2:3611101/1‑97 (MQ=255) ntCACAATAGGGCGCGAATATTACGCAAAACGCACGCCTTTGACAAGTGCTACAGTCAATAC‑ACG‑AAGAAAAAAAAA‑CACAACTTGTACGGTAACGTTTa > 1:720731/2‑100 (MQ=255) tCACAATAGGGCGCGAATATTACGCAAAACGCACGCCTTTGACAAGTGCTACAGTCAATAC‑ACG‑AAGAAAAAAAAA‑CACAACTTGTACGGTAACGttt > 1:2221504/1‑98 (MQ=255) tCACAATAGGGCGCGAATATTACGCAAAACGCACGCCTTTGACAAGTGCTACAGTCAATAC‑ACG‑AAG‑AAAAAAAA‑CACAACTTGTACGGTAACGTTTATc < 2:3147344/100‑1 (MQ=255) cacaATAGGGCGCGAATATTACGCAAAACGCACGCCTTTGACAAGTGCTACAGTCAATAC‑ACG‑AAGAAAAAAAAA‑CACAACTTGTACGGTAACGttt > 1:3498122/1‑97 (MQ=255) cacaATAGGGCGCGAATATTACGCAAAACGCACGCCTTTGACAAGTGCTACAGTCAATAC‑ACG‑AAGAAAAAAAAA‑CACAACTTGTACGGTAACGTTTATc > 2:3051499/1‑100 (MQ=255) cacaATAGGGCGCGAATATTACGCAAAACGCACGCCTTTGACAAGTGCTACAGTCAATAC‑ACG‑AAGAAAAAAAAA‑CACAACTTGTACGGTAACGTTTATc > 2:3133257/1‑100 (MQ=255) acaATAGGGCGCGAATATTACGCAAAACGCACGCCTTTGACAAGTGCTACAGTCAATAC‑ACG‑AAGAAAAAAAAA‑CACAACTTGTACGGTTACATTTATc > 2:765469/1‑99 (MQ=255) aaTAGGGCGCGAATATTACGCAAAACGCACGCCTTTGACAAGTGCTACAGTCAATAC‑ACG‑AAGAAAAAAAAA‑CACAACTTGTACGGTAACGTTTATCt < 1:631970/98‑1 (MQ=255) aaTAGGGCGCGAATATTACGCAAAACGCACGCCTTTGACAAGTGCTACAGTCAATAC‑ACG‑AAG‑AAAAAAAA‑CACAACTTGTACGGTAACGTTTATCtgtg > 2:1681452/1‑100 (MQ=255) aTAGGGCGCGAATATTACGCAAAACGCACGCCTTTGACAAGTGCTACAGTCAATAC‑ACG‑AAGAAAAAAAAA‑CACAACTTGTACGCCAACGTTTATc > 1:1698613/1‑96 (MQ=255) ggCGCGAATATTACGCAAAACGCACGCCTTTGACAAGTGCTACAGTCAATAC‑ACG‑AAGAAAAAAAAA‑CACAACTTGTACGGGAACGTTTATCTGTGCCAt > 2:3570960/1‑100 (MQ=255) gcgcGAATATTACGCAAAACGCACGCCTTTGACAAGTGCTACAGTCAATAC‑ACG‑AAGAAAAAAAAA‑CACAACTTGTACGGTAACGTTTATCtgt > 1:3323826/1‑94 (MQ=255) gcgcGAATATTACGCAAAACGCACGCCTTTGACAAGTGCTACAGTCAATAC‑ACG‑AAGAAAAAAAAA‑CACAACTTGTACGGTAACGTTTATCTGTGCCAtt > 2:3468975/1‑100 (MQ=255) cgcgAATATTACGCAAAACGCACGCCTTTGACAAGTGCTACAGTCAATAC‑ACG‑AAGAAAAAAAAA‑CACAACTTGTACGGTAACGTTTATCTGTTCCAttt > 2:334716/1‑100 (MQ=255) cgcgAATATTACGCAAAACGCACGCCTTTGACAAGTGCTACAGTCAATAC‑ACG‑AAGAAAAAAAAA‑CACAACTTGTACGGTAACGTTTATCCGTGCCAttt > 2:406203/1‑100 (MQ=255) gcgAATATTACGCAAAACGCACGCCTTTGACAAGTGCTACAGTCAATAC‑ACG‑AAGAAAAAAAAA‑CACAACTTGTACGGTAACGTTTATCTGTGCCAtttt > 1:1847207/1‑100 (MQ=255) gAATATTACGCAAAACGCACGCCTTTGACAAGTGCTACAGTCAATAC‑ACG‑AAGAAAAAAAAA‑CACAACTTGTACGGTAACGTTTATCTGTGCCAtttttt > 2:2232353/1‑100 (MQ=255) gAATATTACGCAAAACGCACGCCTTTGACAAGTGCTACAGTCAATAC‑ACG‑AAGAAAAAAAAA‑CACAACTTGTACGGTAACGTTTATCTGTGCCAtttttt < 2:1602013/100‑1 (MQ=255) aaTATTACGCAAAACGCACGCCTTTGACAAGTGCTACAGTCAATAC‑ACG‑AAGAAAAAAAAA‑CACAACTTGTACGGTAACGTTTATCTGTGCCATTTTTTc < 1:3484451/100‑1 (MQ=255) ccgatctgCAAAACGCACGCCTTTGACAAGTGCTACAGTCAATAC‑ACG‑AAG‑AAAAAAAA‑CACAACTTGTACGGTAACGTTTATCTGTGCCATTTTTTCAg < 2:949522/93‑1 (MQ=255) atatTACGCAAAACGCACGCCTTTGACAAGTGCTACAGTCAATAC‑ACG‑AAGAAAAAAAAA‑CACAACTTGTACGGTAACGTTTATCTGTGCCATTTTTTc < 1:2571882/99‑1 (MQ=255) atatTACGCAAAACGCACGCCTTTGACAAGTGCTACAGTCAATAC‑ACG‑AAGAAAAAAAAA‑CACAACTTGTACGGTAACGTTTATCTGTGCCATTTTTTCa < 2:2478356/100‑1 (MQ=255) atatTACGCAAAACGCACGCCTTTGACAAGTGCTACAGTCAATAC‑ACG‑AAGAAAAAAAAA‑CACAACTTGTACGGTAACGTTCATCTGTGCCATTTTTTCa > 2:1904030/1‑100 (MQ=255) atatTACGCAAAAAGCACGCCTTTGACAAGTGCTACTGTCAATAC‑AAA‑AAAAAAAAAAAA‑CACAACTTGTACGGTAACGTTTATCTGTGCCATTTTTTc < 1:858742/99‑1 (MQ=255) tatTACGCAAAACGCACGCCTTTGACAAGTGCTACAGTCAATAC‑ACG‑AAGAAAAAAAAA‑CACAACTTGTACGGTAACGTTTATCTGTGCCATTTTTTCa > 2:564877/1‑99 (MQ=255) tatTACGCAAAACGCACGCCTTTGACAAGTGCTACAGTCAATAC‑ACG‑AAGAAAAAAAAA‑CACAACTTGTACGGTAACGTTTATCTGTGCCATTTTTTCAg < 2:1098608/100‑1 (MQ=255) tatTACGCAAAACGCACGCCTTTGACAAGTGCTACAGTCAATAC‑ACG‑AAAAAAAAAAAA‑CACAACTTGTACGGTAACGTTTATCTGTGCCATTTTTTCAg < 1:1051148/100‑1 (MQ=255) atTACGCAAAACGCACGCCTTTGACAAGTGCTACAGTCAATAC‑ATG‑AAGAAAAAAAAA‑CACAACTTGTACGGTAACGTTTATCTGTGCCATTTTTTCAGt < 2:2255032/100‑1 (MQ=255) atTACGCAAAACGAAAGACTTTGACAAGTGCTACAGTCAATAA‑AAAAAAA‑AAAAAAAA‑CACAACTTGTACGGTAACGTTTATCTGTGCCATTTTTTCAg < 1:336640/99‑1 (MQ=255) ttACGCAAAACGCACGCCTTTGACAAGTGCTACAGTCAATAC‑ACG‑AAGAAAAAAAAA‑CACAACTTGTACGGTAACGTTTATCTGTGCCATTTTTTCAGTa < 1:1983409/100‑1 (MQ=255) tACGCAAAACGCACGCCTTTGACAAGTGCTACAGTCAATAC‑ACG‑AAGAAAAAAAAA‑CACAACTTGTACGGTAACGTTTATCTGTGCCATTTTTTCAGt > 1:850178/1‑98 (MQ=255) gCAAAACGCACGCCTTTGACAAGTGCTACAGTCAATAC‑ACG‑AAG‑AAAAAAAA‑CACAACTTGTACGGTAACGTTTATCTGTGCCATTTTTTCAgagatcgg > 1:949517/1‑93 (MQ=255) aaaaCGCACGCCTTTGACAAGTGCTACAGTCAATAC‑ACG‑AAGAAAAAAAAA‑CACAACTTGTACGGTAACGTTTATCTGTGCCATTTTTTCAGTACAATCa > 2:3777921/1‑100 (MQ=255) aaaCGCACGCCTTTGACAAGTGCTACAGTCAATAC‑ACG‑AAGAAAAAAAAA‑CACAACTTGTACGGTAACGTTTATCTGTGCCATTTTTTCAGTACAATCAc > 2:1618534/1‑100 (MQ=255) aaCGCACGCCTTTGACAAGTGCTACAGTCAATAC‑AAG‑AAGAAAAAAAAA‑CACAACTTGTACGGTAACGTTTATCTGTGCCATTTTTTCAGTACAATCAcc < 1:1149494/100‑1 (MQ=255) cgcacgcCTTTGACAAGTGCTACAGTCAATAC‑ACG‑AAGAAAAAAAAA‑CACAACTTGTACGGTAACGTTTATCTGTGCCATTTTTTAAGTACAATCAcac > 1:1588144/1‑97 (MQ=255) aaaacaaatttGACAAGTGTTACAGTCAAAAAAAAA‑AAA‑AAAAAAAA‑CACAACTTGTACGGTAACGTTTATCTGTGCCATTTTTTCAGTACAATCAccc < 1:1667168/91‑1 (MQ=255) gcacgcCTTTGACAAGTGCTACAGTCAATAC‑ACG‑AAGAAAAAAAAA‑CACAACTTGTACGGTAACGTTTATCTGTGCCATTTTTTCAGTACAATCACCCta < 2:1461039/100‑1 (MQ=255) cacgcCTTTGACAAGTGCTACAGTCAATAC‑ACG‑AAG‑AAAAAAAACCACAACTTGTACGGTAACGTTTATCTGTGACATTTTTCCAGTACACTCACCCta > 1:1023686/1‑99 (MQ=255) aggcCTTAGACAAGTGCTACCGGCAAAAC‑ACG‑AAGAAAAAAAAA‑CACAACTTGTACGGTAACGTTTATCTGTGCCATTTTTTCAGTACAATCACCCta < 1:3062587/96‑1 (MQ=255) ccTTTGACAAGTGCTACAGTCAATAC‑ACG‑AAGAAAAAAAAA‑CACAACTTGTCCGGTAACGTTTATCTGTGCCATTTTTTCCGTACAATCACCCTATAtt > 2:1044475/1‑99 (MQ=255) ccTTTGACAAGTGCTACAGTCAATAC‑ACG‑AAGAAAAAAAAA‑CACAACTTGTACGGTAACGTTTATCTGTGCCATTTTTTCAGTACAATCACCCTATATTc > 2:1629813/1‑100 (MQ=255) cTTTGACAAGTGCTACAGTCAATAC‑ACG‑AAGAAAAAAAAA‑CACAACTTGTACGGTAACGTTTATCTGTGCCATTTTTTCAGTACAATCACCCTATATTcc < 2:1199732/100‑1 (MQ=255) cTTTGACAAGTGCTACAGTCAATAC‑ACG‑AAGAAAAAAAAA‑CACAACTTGTACGGTAACGTTTATCTGTGCCATTTTTTCAGTACAATCACCCTATATTcc < 2:1065144/100‑1 (MQ=255) cTTTGACAAGTGCTACAGTCAATAC‑ACG‑AAGAAAAAAAAA‑CACAACTTGTACGGTAACGTTTATCTGTGCCATTTTTTCAGTACAATCACCCTATATTcc < 2:3473697/100‑1 (MQ=255) tttGACAAGTGCTACAGTCAATAC‑ACG‑AAGAAAAAAAAA‑CACAACTTGTACGGTAACGTTTATCTGTGCCATTTTTTCAGTACAATCACCCTATATTCCt < 2:3083192/100‑1 (MQ=255) tttCACAAGTGTGACAGTCAATAA‑ACA‑AAAAAAAAAAAA‑CACAACTTGTACGGTAACGTTTATCTGTGCCATTTTTTCAGTACAATCACCCTATATTcc < 1:1757641/99‑1 (MQ=255) ttGACAAGTGCTACAGTCAATAC‑ACA‑AAAAAAAAAAAA‑CACAACTTGTACGGTAACGTTTATCTGTGCCATTTTTTCAGTACAATCACCCTATATTCCTa < 1:2573253/100‑1 (MQ=255) ttGACAAGTGCTACAGTAAAAAC‑AAA‑AAAAAAAAAAAA‑CACAACTTGTACGGTAACGTTTATCTGTGCCATTTTTTCAGTACAATCACCCTATATTcc < 1:1935111/98‑1 (MQ=255) tGACAAGTGCTACAGTCAATAC‑ACG‑AAGAAAAAAAAA‑CACAACTTGTACGGTAACGTTTATCTGTGCCATTTTTTCAGTACAATCACCCTATATTCCTaa < 2:3241796/100‑1 (MQ=255) gACAAGTGCTACAGTCAATAC‑ACG‑AAGAAAAAAAAA‑CACAACTTGTACGGTAACGTTTATCTGTGCCATTTTTTTAGTATATTCACCCTATATTCCTa > 1:265329/1‑98 (MQ=255) gACAAGTGCTACAGTCAATAC‑ACG‑AAGAAAAAAAAA‑CACAACTTGTACGGTAACGTTTATCTGTGCCATTTTTTCAGTACAATCACCCTATATTCCTAAc < 2:481580/100‑1 (MQ=255) gACAAGTGCTACAGTCAATAC‑AAG‑AAGAAAAAAAAA‑CACAAATTGTACGGTAACGTTTATATGTGCCATTTTTTAAGTACAATCACCATATATTCCTAAc > 1:3796244/1‑100 (MQ=255) aCAAGTGCTACAGTCAATAC‑ACG‑AAGAAAAAAAAA‑CACAACTTGTACGGTAACGTTTATCTGTGCCATTTTTTCAGTACAATCACCCTATATTCCTAAcc < 2:2138849/100‑1 (MQ=255) cAAGTGCTACAGTCAATAC‑ACG‑AAGAAAAAAAAA‑CACAACTTGTACGGTAACGTTTATCTGTGCCATTTTTTCAGTACAATCACCCTATATTCCTAACCa > 1:1033386/1‑100 (MQ=255) cAAGTGCTACAGTCAATAC‑ACG‑AAGAAAAAAAAA‑CACAACTTGTACGGTAACGTTTATCTGTGCCATTTTTTCAGTACAATCACCCTATATTCCTAACCa > 1:1033229/1‑100 (MQ=255) cAAGTGCTACAGTCAATAA‑ACG‑AAGAAAAAAAAA‑CACAACTTGTACGGTAACGTTTATCTGTGCCATTTTTTCAGTACAATCACCCTATATTCCTAACCa < 1:1023958/100‑1 (MQ=255) cAAGGGCTACAGTCAATAC‑ACG‑AAGAAAAAAAAA‑CACAACTTGTACGGTAACGTTTATCTGTGCCATTTTTTCAGTACAATCACCCTATATTCCTAACCa < 2:1800579/100‑1 (MQ=255) aaGTGCTACAGTCAATAC‑AAG‑AAGAAAAAAAAA‑CACAACTTGTACGGTAACGTTTATCTGTGCCATTTTTTCAGTACAATCACCCTATATTCCTAACCAt < 1:2232343/100‑1 (MQ=255) aGTGCTACAGTCAATAC‑ACG‑AAGAAAAAAAAA‑CACAACTTGTACGGTAACGTTTATCTGTGCCATTTTTTCAGTACAATCACCCTATATTCCTAACCATa > 2:2252966/1‑100 (MQ=255) gTGCTAAAGTCAATTC‑ATG‑AAGAAAAAAAAA‑CACAACTTGTACGGTAACGTTTATCTGTGGCATTTGTTCCGTACAAGCACTCCACATTCCTAACCATaa < 1:1651403/100‑1 (MQ=255) tACAGTCAATAC‑ACG‑AAGAAAAAAAAA‑CACAACTTGTACGGTAACGTTTATCTGTGCCATTTTTTCAGTACAATCACCCTATATTCCTAACCATAAAccc < 2:2619314/100‑1 (MQ=255) aGTCAATAC‑ACG‑AGGAAAAAAAAA‑CACAACTTGTACGGTAACGTTTATATGTGCCATTTTTTTAGTACAATCACCCGATATTCCGAAACATAAACCCTaa > 1:2885436/1‑100 (MQ=255) aGTCAATAC‑ACG‑AAGAAAAAAAAA‑CACAACTTGTACGGTAACGTTTATCTGTGCCATTTTTTCAGTACAATCACCCTATATTCCTAACCATAAACCCTa < 1:328775/99‑1 (MQ=255) gTCAATAC‑ACG‑AAGAAAAAAAAA‑CACAACTTGTTCTGTAACGTTTATCAGTGCCAATTTTTCAGCACAAACCCCCAATATTCCTTATCCTAAAccc > 2:563722/1‑96 (MQ=255) gTCAATAC‑ACG‑AAGAAAAAAAAA‑CACAACTTGTACGGTAACGTTTATCTGTGCCATTTTTTTTTTTTTTTTTCCCTATATTCCTAACCATAAACCCt > 1:408863/1‑97 (MQ=255) gTCAATAC‑ACG‑AAGAAAAAAAAA‑CACAACTTGTACGGTAACGTTTATCTGTGCCATTTTTTCAGTACAATCACCCTATATTCCTAACCATAAACCCTAAg > 2:2715166/1‑100 (MQ=255) tCAATAC‑ACG‑AAGAAAAAAAAA‑CACAACTTGTACGGTAACGTTTATCTGTGCCATTTTTTCAGTACAATCACCCTATATTCCTAACCATAAACCCTAAGt < 2:1343239/100‑1 (MQ=255) cAATAC‑ACG‑AAGAAAAAAAAA‑CACAACTTGTACGGTAACGTTTATCTGTGCCATTTTTTCAGTACAATCACCCTATATTCCTAACCATAAACCCTAAGtt > 1:893432/1‑100 (MQ=255) aaTAC‑ACG‑AAGAAAAAAAAA‑CACAACTTGTACGGTAACGTTTATCTGTGCCATTTTTTCAGTACAATCACCCTATATTCCTAACCATAAACCCTAAGTTg < 2:1507989/100‑1 (MQ=255) tAC‑ACG‑AAGAAAAAAAAA‑CACAACTCGTACGGTAACGTTTATCTGTGCCATTTTTTCAGTACAATCACCCTATATTCCTAACCATAAACCCTAAGTTGcc < 2:1062892/100‑1 (MQ=255) ac‑acG‑AAG‑AAAAAAAA‑CACAACTTGTACGGTAACGTTTATCTGTGCCATTTTTTCAGTACAATCACCCTATATTCCTAACCATAAACCCTAAGTTGCCtt < 1:1681445/100‑1 (MQ=255) cG‑AAGAAAAAAAAA‑CACAACTTGTACGGTAACGTTTATCTGTGCCATTTTTTCAGTACAATCACCCTATATTCCTAACCATAAACCCTAAGTTGCCTTTg < 2:446829/100‑1 (MQ=255) cG‑AAGAAAAAAAAA‑CACAACTTGTACGGTAACGTTTATCTGTGCCATTTTTTCAGTACAATCACCCTATATTCCTAACCATAAACCCTAAGTTGCCTTTg < 2:3595711/100‑1 (MQ=255) cG‑AAGAAAAAAAAA‑CACAACTTGTACGGTAACGTTTATCTGTGCCATTTTTTCAGTACAATCACCCTATATTCCTAACCATAAACCCTAAGTTGCCTTTg < 2:3228765/100‑1 (MQ=255) aag‑aaAAAAAA‑CACAACTTGTACGGTAACGTTTATCTGTGCCATTTTTTCAGTACAATCACCCTATATTCCTAACCATAAACCCTAAGTTGCCTTTGTTc < 2:74776/100‑1 (MQ=255) | CTTTTCAATGATTCAGAGTGCGCTATAAATATTCACAATAGGGCGCGAATATTACGCAAAACGCACGCCTTTGACAAGTGCTACAGTCAATAC‑ACG‑AAG‑AAAAAAAA‑CACAACTTGTACGGTAACGTTTATCTGTGCCATTTTTTCAGTACAATCACCCTATATTCCTAACCATAAACCCTAAGTTGCCTTTGTTC > NC_000913/3333476‑3333671 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |