| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 3,459,293:1 | (G)5→6 | 100% | coding (955/1482 nt) | gspE → | general secretory pathway component, cryptic |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,459,288 | 1 | . | G | 96.4% | 473.8 / 9.1 | 139 | coding (950/1482 nt) | gspE | general secretory pathway component, cryptic |
| Reads supporting (aligned to +/- strand): ref base . (4/1); new base G (57/77); total (61/78) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.69e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.74e-01 | |||||||||||
Only 100 of 155 total aligned reads displayed.
TGGAAGGCATTGGGCAAACGCAGGTGAATACCCGTGTGGATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCATGG‑T‑GG‑GGGAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCATCTGGTACTCTCAACACTCCACACTAACAGTGCA > NC_000913/3459189‑3459382 | tGGAAGGCATTGGGCAAACGCAGGTGAATACCCGTGTGGATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCAtgg‑t < 1:3694116/100‑1 (MQ=255) ggAAGGCATTGGGCAAACGCAGGTGAATACCCGTGTGGACATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCAtgg‑t‑g > 2:741452/1‑100 (MQ=255) aaGGCATTGGGCAAACGCAGGTGAATACCCGTGTGGATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCATGG‑T‑gg‑g > 1:2158430/1‑100 (MQ=255) aaGGCATTGGGCAAACGCAGGTGAATACCCGTGTGGATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCATGG‑T‑gg‑g > 2:3521524/1‑100 (MQ=255) aGGCATTGGGCAAACGCAGGTGAATACCCGTGTGGATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCATGG‑T‑gg‑gg < 2:2233950/100‑1 (MQ=255) aGGCATTGGGCAAACGCAGGTGAATACCCGTGTGGATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCATGG‑T‑gg‑gg < 2:1147618/100‑1 (MQ=255) aGGCATTGGGCAAACGCAGGTGAATACCCGTGTGGATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCATGG‑T‑gg‑gg < 2:3658002/100‑1 (MQ=255) ggCATTGGGCAAACGCAGGTGAATACCCGTGTGGATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCTGATGTCGTCATGG‑T‑gg‑ggg < 1:1162273/100‑1 (MQ=255) cATTGGGCAAACGCAGGTGAATACCCGTGTGGATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCATGG‑T‑gg‑gggga > 2:860744/1‑98 (MQ=255) cATTGGGCAAACGCAGGTGAATACCCGTGTGGATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCATGG‑T‑gg‑gggga > 2:630093/1‑98 (MQ=255) cATTGGGCAAACGCAGGTGAATACCCGTGTGGATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCATGG‑T‑gg‑gggga > 2:2726096/1‑98 (MQ=255) aTTGGGCAAACGCAGGTGAATACCCGTGTGGATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCATGG‑T‑gg‑ggggaa > 2:2311706/1‑97 (MQ=255) aTTGGGCAAACGCAGGTGAATACCCGTGTGGATATGTCTTTCGCGGGCGGCCTGCGCGCCATGCTTCGCCAGGAGCCGGATGTCGTCAGGG‑T‑GG‑GGGgaa > 1:1131070/1‑100 (MQ=255) gggCAAACGCAGGTGCATACACGTGTGGATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCTTGG‑TGGG‑GGGAAAtt > 1:772911/1‑100 (MQ=255) cAAACGCAGGTGAATACCCGTGTGGATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCATGG‑TGGG‑GGGAAATTCGt < 1:3363200/100‑1 (MQ=255) aaaCGCAGGTGAATACCCTTGTGGATATGTCTTTCGCTCGCGGCCTGCGCGGCAGACTTCGCCAGGACCCGGATGTCGTCATGG‑TGGG‑GGGAAATTCGTg < 1:357948/100‑1 (MQ=255) aaaCGCAGGTGAATACCCGTGTGGATATGTCTTTCGCTCGCGGCCTGCGTGCCATACTTCGCCAGGACCCGGATGTCGTCATGG‑TGGG‑GGGAAATTCGTg < 2:3774791/100‑1 (MQ=255) aaaCGCAGGTGAATACCCGTGTGGATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCATGG‑TGGG‑GGGAAATTCGTg < 1:725863/100‑1 (MQ=255) aaaCGCAGGTGAATACCCGTGTGGATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCATGG‑TGGG‑GGGAAATTCGTg < 1:2358105/100‑1 (MQ=255) agcGCAGGTGCACACCCGTGTGGTTATGTCGTTCGCTCGCGGCCGGCGCGCCATACGTCGCCCGGACCCGGATGTCGTCATGG‑TGGG‑GGGAAATTCGTg < 1:2094537/97‑1 (MQ=255) aaCGCAGGTGAATACCCGTGTGGATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCATGG‑TGGG‑GGGAAATTCGTGa < 2:2168483/100‑1 (MQ=255) aCGCAGGTGAATACCCGTGTGGATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCATGG‑TGGG‑GGGAAATTCGTGAt < 2:1138618/100‑1 (MQ=255) aGGTGAATACCCGTGTGGATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCATGG‑TGGG‑GGGAAATTCGTGATACAg < 2:3746396/100‑1 (MQ=255) ggTGAATACCCGTGTGGATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCATGG‑TGGG‑GGGAAATTCGTGATACAGa > 1:485655/1‑100 (MQ=255) ggTGAATACCCGTGTGGATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCATGG‑TGGG‑GGGAAATTCGTGATACAGa > 1:2379808/1‑100 (MQ=255) tGAATACCCGTGTGGATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCATGG‑TGGG‑GGGAAATTCGTGATACAGaaa > 2:2251084/1‑100 (MQ=255) aaTACCCGTGTGGATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCATGG‑TGGG‑GGGAAATTCGTGATACAGAAAcc > 2:3400675/1‑100 (MQ=255) aCCCGTGTGGATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCATGG‑TGGG‑GGGAAATTCGTGATACAGAAACcgcg < 1:1215580/100‑1 (MQ=255) cccGTGTGGATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCATGG‑TGGG‑GGGAAATTCGTGATACAGAAACCgcgc < 2:199488/100‑1 (MQ=255) cGTGTGGATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCATGG‑TGGG‑GGGAAATTCGTGATACAGAAACCGCGCAg > 2:1656614/1‑100 (MQ=255) tgGATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCATGGCG‑GG‑GGGAAATTCGTGATACAGAAACCGCGCAGATTg > 1:973749/1‑100 (MQ=255) ggATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCATGG‑TGGG‑GGGAAATTCGTGATACAGAAACCGCGCAGATTGc > 2:126119/1‑100 (MQ=255) ggATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCATGG‑TGGG‑GGGAAATTCGTGATACAGAAACCGCGCAGATTGc > 1:3487910/1‑100 (MQ=255) gATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCATGG‑TGGG‑GGGAAATTCGTGATTCAGAAACCGCGCAGATTGCg < 1:2311440/100‑1 (MQ=255) atatGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCATGG‑TGGG‑GGGAAATTCGTGATACAGAAACCGCGCAGATTGCgg < 2:756639/100‑1 (MQ=255) tatGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCATGG‑TGGG‑GGGAAATTCGTGATACAGAAACCGCGCAGATTGCGGt < 1:246620/100‑1 (MQ=255) atGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCATGG‑TGGG‑GGGCAATTCGACATACAGAAACCGCGCAGATTGCGGt > 1:2182587/1‑99 (MQ=255) tCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCATGG‑TGGG‑GGGAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAg < 1:2744430/100‑1 (MQ=255) cTTTCGCTCGTGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCATGG‑T‑GGTGGGAGATAAGTGATACAGAAACCGCGAGCATCGCGGTTCAgg > 1:2829092/1‑100 (MQ=255) cTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCATGG‑TGGG‑GGGAGATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAgg > 1:2556630/1‑100 (MQ=255) cTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCATGG‑TGGG‑GGGAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAgg < 1:142910/100‑1 (MQ=255) cTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCATGG‑TGGG‑GGGAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAgg > 1:1359434/1‑100 (MQ=255) tttCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCATGG‑TGGG‑GGGAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGc < 1:3475167/100‑1 (MQ=255) tttCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCATGG‑TGGG‑GGGAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGc < 2:2529197/100‑1 (MQ=255) ttCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCATGG‑TGGG‑GGGAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGcc < 1:545334/100‑1 (MQ=255) gtcgctcgcGGCCTGCGCGCCATACGTCGCCAGGACCCGGATGTCGTCATGG‑TGGG‑GGGAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGcc < 1:1968737/99‑1 (MQ=255) cgctcgcGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCATGG‑TGGG‑GGGAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTc > 1:1507298/1‑100 (MQ=255) gctcgcGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCATGG‑TGGG‑GGGAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCg > 2:3087557/1‑100 (MQ=255) gcgGCCTGCGCGCCATACTTCGCCAGGACCCGAATGTCGTCATGG‑TGGG‑GGGAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGc < 1:1027948/92‑1 (MQ=255) cgGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCATGG‑TGGG‑GGGAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCAc > 1:2140844/1‑100 (MQ=255) cgGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCATGG‑TGGG‑GGGAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCAc < 2:2684421/100‑1 (MQ=255) ggCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCATGG‑TGGG‑GGGAAATTCGTGATACAGAAACCGCGAAGATTGCGGTTCAGGCCTCGCTCAcc > 1:2734197/1‑100 (MQ=255) gCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCATGG‑TGGG‑GGGAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCg < 1:39769/100‑1 (MQ=255) ccTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCATGG‑TGGG‑GGGAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCgg < 1:2853719/100‑1 (MQ=255) ccTGCGCGCCATACTTCGCCAGGACCCGGATGGCGTCATGG‑TGGG‑GGGAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCgg < 1:825308/100‑1 (MQ=255) ccTGCGCGCCATACTTCGCCAGGACCCGGATGCCGTCAAGG‑TGGG‑GGGAAAATCGAGGTAAAGAACCGGACAAGACTGCGGTTCACGCCGCGCt > 1:370224/1‑94 (MQ=255) cTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCATGG‑TGGG‑GGGAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGc > 2:2941333/1‑100 (MQ=255) tGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCATGG‑TGGG‑GGGAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGcc > 2:1830445/1‑100 (MQ=255) cgcCATACTTCGCCAGGACCCGGATGTCGTCATGG‑TGGG‑GGGAAATTCGTGATACAGAAACCGCGCAGATTGCGACTCAGGCCTCGCTCACCGGCCATCt > 1:1958483/1‑100 (MQ=255) gcCATACTGCGCCAGGACCCGGATGTCGTCATGG‑TGGG‑GGGAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCATc < 1:1280929/98‑1 (MQ=255) ccATACTTCGCCAGGACCCGGATGTCGTCATGG‑TGGG‑GGGAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCATCTg > 2:2065935/1‑99 (MQ=255) aTACTTCGCCAGGACCCGGATGTCGTCATGG‑TGGG‑GGGAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCATCTGGTa < 1:1208377/100‑1 (MQ=255) tACTTCGCCAGGACCCGGATGTCGTCATGG‑TGGG‑GGGAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCATCTGGTAc < 2:1450362/100‑1 (MQ=255) cTTCGCCAGGACCCGGATGTCGTCATGG‑TGGG‑GGGAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCATCTGGTActc > 1:939349/1‑100 (MQ=255) cTTCGCCAGGACCCGGATGTCGTCATGG‑TGGG‑GGGAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCATCTGGTActc < 2:2791740/100‑1 (MQ=255) cTTCGCCAGGACCCGGATGTCGTCATGG‑TGGG‑GGGAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCATCTGGTActc > 2:777461/1‑100 (MQ=255) cTTCGCCAGGACCCGGATGTCGTCATGG‑TGGG‑GGGAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCATCTGGTActc > 1:1662238/1‑100 (MQ=255) cGCCAGGACCCGGATGTCGTCATGG‑TGGG‑GGGAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCATCTGGTACTCTCa < 2:2844652/100‑1 (MQ=255) cGCCAGGACCCGGATGTCGTCATGG‑TGGG‑GGGAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCATCTGGTACTCTCa < 2:2528290/100‑1 (MQ=255) gCCAGGACCCGGATGTCGTCATGG‑TGGG‑GGGAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCATCTGGTACTCTCaa > 1:1131927/1‑100 (MQ=255) gCCAGGACCCGGATGTCGTCATGG‑TGGG‑GGGAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCATCTGGTACTCTCaa > 2:65504/1‑100 (MQ=255) gCCAGGACCCGGATGTCGTCATGG‑TGGG‑GGGAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCATCTGGTACTCTCaa < 2:2389405/100‑1 (MQ=255) gCCAGGACCCGGATGTCGTCATGG‑TGGG‑GGGAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCATCTGGTACTCTCaa > 1:729015/1‑100 (MQ=255) ccAGGACCCGGATGTCGTCATGG‑TGGG‑GGGAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCATCTGGTACTCTCacc > 1:646247/1‑98 (MQ=255) ccAGGACCCGGATGTCGTCATGG‑TGGG‑GGGAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCATCTGGTACTCTCAac < 2:3039074/100‑1 (MQ=255) ccAGGACCCGGATGTCGTCATGG‑TGGG‑GGGAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCATCTGGTACTCTCAac < 1:1507851/100‑1 (MQ=255) aGGACCCGGATGTCGTCATGG‑TGGG‑GGGAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCATCTGGTACTCTCAacac > 2:3184094/1‑100 (MQ=255) aGGACCCGGATGTCGTCAGGG‑TGGG‑GGGAAATTCGTGATACAGACACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCATCTGGTACTCTCAaca < 1:2478262/99‑1 (MQ=255) aCCCGGATGTCGTCATGG‑TGGG‑GGGAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCATCTGGTACTCTCAACACTcc < 1:2036117/100‑1 (MQ=255) aCCCGGATCTCGTCATGG‑TGGG‑GGGAAATTCGTGATTCAGAACCCGCACAGATCTCGCGTCAGGCCTCGCTCACCGACCATCTGGTACTCTCAACACTcc < 1:2819616/100‑1 (MQ=255) cccGGATGTCGTCATGG‑TGGG‑GGGAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCATCTGGTACTCTCAACACTCca > 2:2249997/1‑100 (MQ=255) cccGGATGTCGTCATGG‑TGGG‑GGGAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCATCTGGTACTCTCAACACTCca > 2:1943692/1‑100 (MQ=255) ccGGATGTCGTCATGG‑TGGG‑GGGAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCATCTGGTACTCTCAACACTCcac > 1:2401382/1‑100 (MQ=255) ggATGTCGTCATGG‑TGGG‑GGGAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCATCTGGTACTCTCAACACTCCacac > 2:1415909/1‑100 (MQ=255) ggATGTCGTCATGG‑TGGG‑GGGAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCATCTGGTACTCTCAACACTCCacac < 1:2856172/100‑1 (MQ=255) ggATGTCGTCATGG‑TGGG‑GGGAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCATCTGGTACTCTCAACACTCCacac > 2:1598747/1‑100 (MQ=255) ggATGTCGTCATGG‑TGGG‑GGGAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCATCTGGTACTCTCAACACTCCacac > 2:3209727/1‑100 (MQ=255) ggtGTCGTCATGG‑TGGG‑GGGAAATTCGTGGTACAGACACCGCGCAGATTGCGGTCCAGGCCTCGCTCACCGGCCATCTGGTACTCTCAACACTCcac < 1:3136184/95‑1 (MQ=255) gATGTCGTCATGG‑TGGG‑GGGAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCATCTGGTACTCTCAACACTCCACACt < 1:3184073/100‑1 (MQ=255) gtcgtcATGG‑TGGG‑GGGAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCATCTGGTACTCTCAACACTCCACACTAAc > 1:2393789/1‑100 (MQ=255) gtcgtcATGG‑TGGG‑GGGAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCATCTGGTACTCTCAACACTCCACACTAAc < 1:1065222/100‑1 (MQ=255) gtcgtcATGG‑TGGG‑GGGAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCATCTGGTACTCTCAACACTCCACACTAAc < 1:385916/100‑1 (MQ=255) cgtcATGG‑TGGG‑GGGAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCATCTGGTACTCTCAACACTCCACACTAACAg > 2:1470828/1‑100 (MQ=255) gtcATGG‑TGGG‑GGGAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCATCTGGTACTCTCAACACTCCACACTAACAGt > 1:3796085/1‑100 (MQ=255) cATGG‑TGGG‑GGGAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCATCTGGTACTCTCAACACTCCACACTAACAGTg < 1:1170668/99‑1 (MQ=255) cATGG‑TGGG‑GGGAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCATCTGGTACTCTCAACACTCCACACTAACAGTGc < 1:1737874/100‑1 (MQ=255) aTGG‑TGGG‑GGGAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCATCTGGTACTCTCAACACTCCACACTAACAGTg < 1:2301396/98‑1 (MQ=255) aTGG‑TGGG‑GGGAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCATCTGGTACTCTCAACACTCCACACTAACAGTGc < 1:3674575/99‑1 (MQ=255) aTGG‑TGGG‑GGGAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCATCTGGTACTCTCAACACTCCACACTAACAGTGCa < 2:772916/100‑1 (MQ=255) aTGG‑TGGG‑GGGAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCATCTGGTACTCTCAACACTCCACACTAACAGTGCa < 1:630089/100‑1 (MQ=255) | TGGAAGGCATTGGGCAAACGCAGGTGAATACCCGTGTGGATATGTCTTTCGCTCGCGGCCTGCGCGCCATACTTCGCCAGGACCCGGATGTCGTCATGG‑T‑GG‑GGGAAATTCGTGATACAGAAACCGCGCAGATTGCGGTTCAGGCCTCGCTCACCGGCCATCTGGTACTCTCAACACTCCACACTAACAGTGCA > NC_000913/3459189‑3459382 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |