New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 3620569 =NA (NA)24 (0.180) 9/166 NT 100% coding (1378/4236 nt) rhsB Rhs protein with DUF4329 family putative toxin domain; putative neighboring cell growth inhibitor
?NC_000913 3620582 = 0 (0.000)coding (1391/4236 nt) rhsB Rhs protein with DUF4329 family putative toxin domain; putative neighboring cell growth inhibitor

CAATTCATCATATTCCCGGCGCAATTCCAGCCCGTCAGGCCCGGTGGCTGACGTTAACTGGTTGTGGTGGTTATAGTAAAACGCCGATGCCCTGCCATCcggcgt‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/3620667‑3620569
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CGGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAATTGCGCCGGGAATATGATGAATTGGGCCGTCTGATTCAGGAAA  >  NC_000913/3620582‑3620686
                                                                                                                                                                                                            
CAATTCATCATATTCCCGGCGCAATTCCAGCCCGTCAGGCCCGGTGGCTGACGTTACCTGGTTGTGGTGGTTATAGTAAAACGCCGATGCCCTGCCATCC                                                                                                          <  1:2780494/100‑1
CAATTCATCATATTCCCGGCGCAATTCCAGCCCGTCAGGCCCGGTGGCTGACGTTAACTGGTTGTGGTGGTTATAGTAAAACGCCGATGCCCTGCCATCC                                                                                                          <  1:1245252/100‑1
CAATTCATCATATTCCCGGCGCAATTCCAGCCCGTCAGGCCCGGTGGCTGACGTTAACTGGTTGTGGTGGTTATAGTAAAACGCCGATGCCCTGCCATCC                                                                                                          >  1:3388583/1‑100
 AATTCATCATATTCCCGGCGCAATTCCAGCCCGTCAGGCCCGGTGGCTGACGTTAACTGGTTGTGGTGGTTATAGTAAAACGCCGATGCCCTGCCATCCG                                                                                                         <  2:514627/100‑1
 AATTCATCATATTCCCGGCGCAATTCCAGCCCGTCAGGCCCGGTGGCTGACGTTAACTGGTTGTGGTGGTTATAGTAAAACGCCGATGCCCTGCCATCCG                                                                                                         <  2:516134/100‑1
   TTCATCATATTCCCGGCGCAATTCCAGCCCGTCAGGCCCGGTGGCTGACGTTAACTGGTTGTGGTGGTTATAGTAAAACGCCGATGCCCTGCCATCCGGC                                                                                                       >  2:2935943/1‑100
   TTCATCATATTCCCGGCGCAATTCCAGCCCGTCAGGCCCGGTGGCTGACGTTAACTGGTTGTGGTGGTTATAGTAAAACGCCGATGCCCTGCCATCCGGC                                                                                                       <  2:2222858/100‑1
   TTCATCATATTCCCGGCGCAATTCCAGCCCGTCAGGCCCGGTGGCTGACGTTAACTGGTTGTGGTGGTTATAGTAAAACGCCGATGCCCTGCCATCCGGC                                                                                                       <  1:2814713/100‑1
   TTCATCATATTCCCGGCGCAATTCCAGCCCGTCAGGCCCGGTGGCTGACGTTAACTGGTTGTGGTGGTTACAGTAAAACGCCGATGCCCTGCCATCCGGC                                                                                                       <  2:2077167/100‑1
    TCATCATATTCCCGGCGCAATTCCAGCCCGTCAGGCCCGGTGGCTGACGTTAACTGGTTGTGGTGGTTATAGTAAAACGCCGATGCCCTGCCATCCGGCG                                                                                                      >  1:1043317/1‑100
    TCATCATATTCCCGGCGCAATTCCAGCCCGTCAGGCCCGGTGGCTGACGTTAACTGGTTGTGGTGGTTATAGTAAAACGCCGATGCCCTGCCATCCGGCG                                                                                                      >  2:878506/1‑100
     CATCATATTCCCGGCGCAATTCCAGCCCGTCAGGCCCGGTGGCTGACGTTAACTGGTTGTGGTGGTTATAGTAAAACGCCGATGCCCTGCCATCCGGCGT                                                                                                     >  1:321481/1‑100
     CATCATATTCCCGGCGCAATTCCAGCCCGTCAGGCCCGGTGGCTGACGTTAACTGGTTGTGGTGGTTATAGTAAAACGCCGATGCCCTGCCATCCGGCGT                                                                                                     >  2:2706261/1‑100
     CATCATATTCCCGGCGCAATTCCAGCCCGTCAGGCCCGGTGGCTGACGTTAACTGGTTGTGGTGGTTATAGTAAAACGCCGATGCCCTGCCATCCGGCGT                                                                                                     <  1:1297870/100‑1
      ATCATATTCCCGGCGCAATTCCAGCCCGTCAGGCCCGGTGGCTGACGTTAACTGGTTGTGGTGGTTATAGTAAAACGCCGATGCCCTGCCATCCGGCGT                                                                                                     >  1:3190089/1‑99
       TCATATTCCCGGCGCAATTGCAGCCCGTCAGGGCCGGTGGCTGACGTTAACTGGTTGTGGTGGTTATAGTAAAACGCCGATGCCCTGCCATCCGGCG                                                                                                      <  2:2295074/97‑1
                                                                 GGTGGTTATAGTAAAACGCCGATGCCCTGCCATCCGGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAATTGC                                         >  1:509123/1‑100
                                                                     GTTATAGTAAAACGCCGATGCCCTGCCATCCGGCGTTTTACTATAACCACCACAGCCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAAATACGCCG                                     >  1:1508001/1‑100
                                                                        ATAGTAAAACGCCGATGCCCTGCCATCCGGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGCCACCGGGCCTGAGGGGCTGGAATTGCGCCGGG                                   >  2:2168503/1‑99
                                                                        ATAGTAAAACGCCGATGCCCTGCCATCCGGCGTTTTACTACAACCACCACAACCAGTTAACGTCAGCCACCGGGCCCGACGGGCTGGAATTGCTCCG                                     >  1:1877590/1‑97
                                                                         TAGTAAAACGCCGATGCCCTGCCATCCGGCGTTTTACTATAACCACCACAGCCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAAATACGCCGGGAA                                 >  2:880018/1‑100
                                                                         TAGTAAAACGCCGATGCCCTGCCATCCGGCGTTTTACTATAACCACCACAGCCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAAATACGCCGGGAA                                 >  2:532635/1‑100
                                                                         TAGTAAAACGCCGATGCCCTGCCATCCGGCGTTTTACTATAACCACCACAACCAGTTACCGTCAGCCACCGGGCCTGACGGGCTGGAATTGCGCCGGGAA                                 >  1:774424/1‑100
                                                                         TAGTAAAACGCCGATGCCCTGCCATCCGGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGCCACCGGGCCTGACGCGCTGGAATTGCGCCGGGAA                                 >  1:2573773/1‑100
                                                                           GTAAAACGCCGATGCCCTGCCATCCGGCGTTTTACTATAACCACCACAGCCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAAATACGCCGGGAATA                               >  2:179129/1‑100
                                                                           GTAAAACGCCGATGCCCTGCCATCCGGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAATTGCGCCGGGAATA                               >  2:1082132/1‑100
                                                                           GTAAAACGCCGATGCCCTGCCATCCGGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAATTGCGCCGGGAATA                               >  2:2179462/1‑100
                                                                           GTAAAACGCCGATGCCCTGCCATCCGGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAATTGCGCCGGGAATA                               >  2:2078812/1‑100
                                                                           GTAAAACGCCGATGCCCTGCCATCCGGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAATTGCGCCGGGAATA                               >  2:3066664/1‑100
                                                                           GTAAAACGCCGATGCCCTGCCATCCGGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAATTGCGCCGGGAATA                               >  2:3138883/1‑100
                                                                           GTAAAACGCCGATGCCCTGCCATCCGGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAATTGCGCCGGGAATA                               >  1:1554662/1‑100
                                                                            TAAAACGCCGATGCCCTGCCATCCGGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAATTGCGCCGGGAATAT                              >  1:135744/1‑100
                                                                             aacACGCCGATGCCGTGCCATCCGGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGCCAACGGGCCTGACGGGCTGGATTTGCGCAGGcca                                 >  1:2961909/4‑93
                                                                             AAAACGCCGATGCCCTGCCATCCGGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAATTGCGCCGGGAATATG                             >  2:2986048/1‑100
                                                                             AAAACGCCGATGCCCTGCCATCCGGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAATTGCGCCGGGAATATG                             >  2:2427356/1‑100
                                                                             AAAACGCCGATGCCCTGCCATCCGGCGTTTTACAATAACCACCACAACCAGTTAACGTCAGCCACCGGGTCTGACGGGCTGGAATTGCGCCGGAAATATG                             >  1:1924125/1‑100
                                                                               AACGCCGATGCCCTGCCATCCGGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAATTGCGCCGGGAATATGAT                           >  2:3130858/1‑100
                                                                               AACGCCGATGCCCTGCCACCCGGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAATTGCGCCGGGAATATGAT                           >  2:3657003/1‑100
                                                                                ACGCCGATGCCCTACCATCCGGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAATTGCGCCGGGAATATGATG                          >  2:2553788/1‑100
                                                                                 CGCCGATGCCCTGCCATCCGGCGTTTTACTATAACCAGCACAACCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAATTGCGCCGGGAATATGA                            >  1:2032617/1‑97
                                                                                                   CGGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAATTGCGCCGGGAATATGATGAATTGGGCCGTCTGATTCA       <  1:1203738/100‑1
                                                                                                    GGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAATTGCGCCGGGAATATGATGAATTGGGCCGTCTGATTCAG      <  1:86501/100‑1
                                                                                                    GGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAATTGCGCCGGGAATATGATGAATTGGGCCGTCTGATTCAG      <  1:2942095/100‑1
                                                                                                    GGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAATTGCGCCGGGAATATGATGAATTGGGCCGTCTGATTCAG      <  1:1433716/100‑1
                                                                                                    GGCGTTTTACTAGAACCACCACAACCGGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAATTGCGCCGGGAATATGATGAATTGGGCCGTCTGATTn        <  1:2623201/98‑2
                                                                                                     GCGTTTTACTATAACCACCACAACCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAATTGCGCCGGGAATATGATGAATTGGGCCGTCTGATTCAGG     >  2:3678094/1‑100
                                                                                                     GCGTTTTACTATAACCACCACAACCAGTTAACGTCAGCCACCGAGCCTGACGGGCTGGAATTGCGCCGGGAATATGATGAATTGGGCCGTCTGATTCAGG     <  1:2400986/100‑1
                                                                                                      CGTTTTACTATAACCACCACAACCAGTTAACGTCCGCCACCGGGCCTGACGGGCTGGAATTGCGCCGGGAATATGATGAATTGGGCCGTCTGATTCAGGA    <  2:3366116/100‑1
                                                                                                      CGTTTTACTATAACCACCACAACCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAATTGCGCCGGGAATATGATGAATTGGGCCGTCTGATTCAGGA    <  2:534692/100‑1
                                                                                                       GTTTTACTATAACCACCACAACCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAATTGCGCCGGGAATATGATGAATTGGGCCGTCTGATTCAAGAA   >  1:3035108/1‑100
                                                                                                        TTTTACTATAACCACCACAACCAGTTCACGTCAGCCACCGGGCCTGACGGGCTGGAATTGCGCCGGGAATATGATGAATTGGGCCGTCTGATTCAGGAAA  >  2:2311899/1‑100
                                                                                                        TTTTACTATAACCACCACAACCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAATTGCGCCGGGAATATGATGAATTGGGCCGTCTGATTCAGGAAA  >  2:2245728/1‑100
                                                                                                        TTTTACTATAACCACCACAACCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAATTGCGCCGGGAATATGATGAATTGGGCCGTCTGATTCAGGAAA  <  2:2147037/100‑1
                                                                                                        TTTTACTATAACCACCACAACCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAATTGCGCCGGGAATATGATGAATTGGGCCGTCTGATTCAGGAAA  >  2:1206512/1‑100
                                                                                                        TTTTACTATAACCACCACAACCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAATTGCGCCGGGAATATGATGAATTGGGCCGTCTGATTCAGGAAA  >  1:689863/1‑100
                                                                                                        TTTTACTATAACCACCACAACCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAATTGCGCCGGGAATATGATGAATTGGGCCGTCTGATTCAGGAAA  >  1:49517/1‑100
                                                                                                                                                                                                            
CAATTCATCATATTCCCGGCGCAATTCCAGCCCGTCAGGCCCGGTGGCTGACGTTAACTGGTTGTGGTGGTTATAGTAAAACGCCGATGCCCTGCCATCcggcgt‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/3620667‑3620569
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CGGCGTTTTACTATAACCACCACAACCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAATTGCGCCGGGAATATGATGAATTGGGCCGTCTGATTCAGGAAA  >  NC_000913/3620582‑3620686

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.