| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 3827294 = | NA (NA) | 5 (0.040) | 5/168 | NT | NA | intergenic (+3/+166) | recG/gltS | ATP‑dependent DNA helicase/glutamate transporter |
| ? | NC_000913 | 3827315 = | NA (NA) | intergenic (+24/+145) | recG/gltS | ATP‑dependent DNA helicase/glutamate transporter | |||||
CAAGCCTGCGTATTGATTCATAATTTATTGAATTTGTAGGGTGATGAATCGCATCCGGCAGGAAGGTAGGGTAACCTGAAATGGCGGTCTTCTCACTGCCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/3827396‑3827294‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgccATTTCAGGTTACCCTACCTTCCTGCCGGATGCGATTCATCACCCTACAAATTCAATAAATTATGAATCAATACGCAGGCTTGATAAGCGAAGCGTAT > NC_000913/3827315‑3827411 CAAGCCTGCGTATTGATTCATAATTTATTGAATTTGTAGGGTGATGAATCGCATCCGGCAGGAAGGTAGGGTAACCTGAAATGGCGGTCTTCTCACTGCC < 2:438009/100‑1CAAGCCTGCGTATTGATTCATAATTTATTGAATTTGTAGGGTGATGAATCGCATCCGGCAGGAAGGTAGGGTAACCTGAAATGGCGGTCTTCTCACTGCC > 2:1162853/1‑100 AAGCCTGCGTATTGATTCATAATTTATTGAATTTGTAGGGTGATGAATCGCATCCGGCAGGAAGGTAGGGTAACCTGAAATGGCGGTCTTCTCACTGCCG > 2:421126/1‑100 AGCCTGCGTATTGATTCATAATTTATTGAATTTGTAGGGTGATGAATCGCATCCGGCAGGAAGGTAGGGTAACCTGAAATGGCGGTCTTCTCACTGCCGC > 2:2237152/1‑100 GCCTGCGTATTGATTCATAATTTATTGAATTTGTAGGGTGATGAATCGCATCCGGCAGGAAGGTAGGGTAACCTGAAATGGCGGTCTTCTCACTGCCGCC > 1:3016026/1‑100 GCCTGCGTATTGATTCATAATTTATTGAATTTGTAGGGTGATGAATCGCATCCGGCAGGAAGGTAGGGTAACCTGAAATGGCGGTCTTCTCACTGCCGCC < 2:2859912/100‑1 GCCTGCGTATTGATTCATAATTTATTGAATTTGTAGGGTGATGAATCGCATCCGGCAGGAAGGTAGGGTAACCTGAAATGGCGGTCTTCTCACTGCCGCC < 2:1616658/100‑1 GCCTGCGTATTGATTCATAATTTATTGAATTTGTAGGGAGATGAATCGCATCCGGCAGGAAGGTAGGGTAACCTGAAATGGCGGTCTTCTCACTGCCGCC < 1:2058208/100‑1 CTGCGTATTGATTCATAATTTATTGAATTTGTAGGGTGATGAATCGCATCCGGCAGGAAGGTAGGGTAACCTGAAATGGCGGCCTTCTCACTGCCGgct > 1:1679108/1‑96 ACCTGAAATGGCGGTCTTCTCACTGCCGCCATTTCAGGTTACCCTACCTTCCTGCCGGATGCGATTCATCACACTACAAATTCAATAAATTATGAATCAA > 1:3156085/1‑100 CCTGAAATGGCGGTCTTCTCACTGCCGCCATTTCAGGTTACCCTACCTTCCTGCCGGATGCGATTCATCACCCTACAAATTCAATAAACTATGACTCAA > 1:2252866/1‑99 CTGAAATGGCGGTCTTCTCACTGCCGCCATTTCAGGTTACCCTACCTTCCTGCCGGATGCGATTCAACACCCTACAAATTCAATAAATTATGAATCAATA > 1:557708/1‑100 GAAATGGCGGTCTTCTCACTGCCGCCATTTCAGGTTACCCTACCTTCCTGCCGGATGCGATTCATCACCCTACAAATTCAATAAATTATGAATCAATACG > 2:337033/1‑100 TGGCGGTCTTCTCACTGCCGCCATTTCAGGTTACCCTACCTTCCTGCCGGATGCGATTCATCACCCTACAAATTCAATAAATTATGAATCAATACGCAGG > 2:1885422/1‑100 CCGCCATTTCAGGTTACCCTACCTTCCTGCCGGATGCGATTCATCACCCTACAAATTCAATAAATTATGAATCACTACGCAGGCTTGATAAGAGAAGCG > 2:2601425/1‑99 CCGCCATTTCAGGTTACCCTACCTTCCTGCCGGATGCGATTCATCACCCTACAAATTCAATAAATTATGAATCAATACGCAGGCTTGATAAGCGAAGCGT < 2:1110524/100‑1 CCGCCATTTCAGGTTACCCTACCTTCCTGCCGGATGCGATTCATCACCCTACAAATTCAATAAATTATGAATCAATACGCAGGCTTGATAAGCGAAGCGT < 2:1696296/100‑1 CCGCCATTTCAGGTTACCCTACCTTCCTGCCGGATGCGATTCATCACCCTACAAATTCAATAAATTATGAATCAATACGCAGGCTTGATAAGCGAAGCGT > 1:3176221/1‑100 CCGCCATTTCAGGTTACCCTACCTTCCTGCCGGATGCGATTCATCACCCTACAAATTCAATAAATTATGAATCAATACGCAGGCTTGATAAGCGAAGCGT > 1:2446811/1‑100 CCGCCATTTCAGGTTACCCTACCTTCCTGCCGGATGCGATTCATCACCCTACAAATCCAATGAATTATGAGGCAATACGCAGGCTTGATAAACGAAGCGT > 1:945182/1‑100 CGCCATTTCAGGTTACCCTACCTTCCTGCCGGATGCGATTCATCACCCTACAAATTCAATAAATTATGAATCAATACGCAGGCTTGATAAGCGAAGCGTA < 1:1302333/100‑1 CGCCATTTCAGGTTACCCTACCTTCCTGCCGGATGCGATTCATCACCCTACAAATTCAATAAATTATGAATCAATACGCAGGCTTGATAAGCGAAGCGTA > 2:2620694/1‑100 CGCCATTTCAGGTTACCCTACCTTCCTGCCGGATGCGATTCATCACCCTACAAATTCAATAAATTATGAATCAATACGCAGGCTTGATAAGCGAAGCGTA < 1:3739695/100‑1 GCCATTTCAGGTTACCCTACCTTCCTGCCGGATGCGATTCATCACCCTACAAATTCAATAAATTATGAATCAATACGCAGGCTTGATAAGCGAAGCGTAT > 2:1275972/1‑100 GCCATTTCAGGTTACCCTACCTTCCTGCCGGATGCGATTCATCACCCTACAAATTCAATAAATTATGAATCAATACGCAGGCTTGATAAGCGAAGCGTAT > 1:1395115/1‑100 CAAGCCTGCGTATTGATTCATAATTTATTGAATTTGTAGGGTGATGAATCGCATCCGGCAGGAAGGTAGGGTAACCTGAAATGGCGGTCTTCTCACTGCCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/3827396‑3827294‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgccATTTCAGGTTACCCTACCTTCCTGCCGGATGCGATTCATCACCCTACAAATTCAATAAATTATGAATCAATACGCAGGCTTGATAAGCGAAGCGTAT > NC_000913/3827315‑3827411 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |