| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 4386017 | NA (NA) | 13 (0.100) | 10/164 | NT | NA | coding (314/315 nt) | yjeO | inner membrane protein |
| ? | NC_000913 | = 4386039 | NA (NA) | intergenic (+21/+8) | yjeO/mscM | inner membrane protein/mechanosensitive channel protein, miniconductance | |||||
TCGCTTTGTGGCGAAAAAAACGCGGCTGGTTTATGTACGCCACCGCGCTGGCTATTTTCGGCTACTGGCTGTGGCAGTTTTTTCTGCGCTATCAGTTTTGTTTGTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/4385912‑4386017‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtttgtgTGCCGGATGAACCAATCCGGCTCACAAACAAAACTGATAGCGCAGAAAAAACTGCCACAGCCAGTAGCCGAAAATAGCCAGCGCGGTGGCGTACATAAA < NC_000913/4386039‑4385941 TCGCTTTGTGGCGAAAAAAACGCGGCTGGTTTATGTACGCCACCGCGCTGGCTATTTTCGGCTACTGGCTGTGGCAGTTTTTTCTGCGCTATCAGTTTTG < 2:2706051/100‑1TCGCTTTGTGGCGAAAAAAACGCGGCTGGTTTATGTACGCCACCGCGCTGGCTATTTTCGGCTACTGGCTGTGGCAGTTTTTTCTGCGCTATCAGTTTTG < 2:214958/100‑1 CGCTTTGTGGCGAAAAAAACGCGGCTGGTTTATGTACGCCACCGCGCTGGCTATTTTCGGCTACTGGCTGTGGCAGTTTTTTCTGCGCTATCAGTTTTGT < 2:463694/100‑1 GCTTTGTGGCGAAAAAAACGCGGCTGGTTTATGTACGCCACCGCGCTGGCTATTTTCGGCTACTGGCTGTGGCAGTTTTTTCTGCGCTATCAGTTTTGTT > 1:801719/1‑100 GCTTTGTGGCGAAAAAAACGCGGCTGGTTTATGTACGCCACCGCGCTGGCTATTTTCGGCTACTGGCTGTGGCAGTTTTTTCTGCGCTATCAGTTTTGTT > 2:1238177/1‑100 GCTTTGTGGCGAAAAAAACGCGGCTGGTTTATGTACGCCACCGCGCTGGCTATTTTCGGCTACTGGCTGTGGCAGTTTTTTCTGCGCTATCAGTTTTGTT < 2:157936/100‑1 TTTGTGGCGAAAAAAACGCGGCTGGTTTATGTACGCCACCGCGCTTGCTATTTTCGGCTACTGGCTGTGGCAGTTTTTTCTGCGCTATCAGTTTTGTTTG < 2:2452046/100‑1 TTTGTGGCGAAAAAAACGCGGCTGGTTTATGTACGCCACCGCGCTGGCTATTTTCGGCTACTGGCTGTGGCAGTTTTTTCTGCGCTATCAGTTTTGTTTG < 1:3362131/100‑1 TGTGGCGAAAAAAACGCGGCTGGTTTATGTACGCCACCGCGCTGGCTATTTTCGGCTACTGGCTGTGGCAGTTTTTTCTGCGCTATCAGTTTTGTTTGTG < 1:796334/100‑1 TGTGGCGAAAAAAACGCGGCTGGTTTATGTACGCCACCGCGCTGGCTATTTTCGGCTACTGGCTGTGGCAGTTTTTTCTGCGCTATCAGTTTTGTTTGTG < 1:1535119/100‑1 CGAAAAAAACGCGGCTGGATTATGTACGCCACCGCGCTGGCTATTTTCGGCTACTGGCTGTGGCAGGGTTTTCTGCGCTATCAGTTTTGTTTtttagccg > 1:3168329/1‑92 TTTATGTACGCCACCGTGCTGGCTATTTTCGGCTACTGGCTGTGGCAGTTTTTTCTGCGCTATCAGTTTTGTTTTTGAGCCGGATGAACCAATCCGGCTt < 1:722380/100‑2 TTTATGTACGCCACCGCGCTGGCTATTTTCGGCTACTGGCTGTGGCAGTTTTTTCTGCGCTATCAGTTTTGTTTGTGAGCCGGATGAACCAATCCGGCTC < 2:1174098/100‑1 TTATGTACGCCACCGCGCTGGCTATTTTCGGCTACTGGCTGTGGCAGTTTTTTCTGCGCTATCAGTTTTGTTTGTGTGCCGGATGAACCAATCCGGCTCA < 2:1138195/100‑1 TATGTACGCCACCGCGCTGGCTATTTTCGGCTACTGGCTGTGGCAGTTTTTTCTGCGCTATCAGTTTTGTTTGTGTGCCGGATGAACCAATCCGGCTCAC < 1:3646422/100‑1 TATGTACGCCACCGCGCTGGCTATTTTCGGCTACTGGCTGTGGCAGTTTTTTCTGCGCTATCAGTTTTGTTTGTGTGCCGGATGAACCAATCCGGCTCAC < 2:3155378/100‑1 TATGTACGCCACCGCGCTGGCTATTTTCGGCTACTGGCTGTGGCAGTTTTTTCTGCGCTATCAGTTTTGTTTGTGTGCCGGATGAACCAATCCGGCTCAC < 1:558131/100‑1 ACGCCACCGCGCTGGCTATTTTCGGCTACTGGCTGTGGCAGTTTTTTCTGCGCTATCAGTTTTGTTTGTGTGCCGGATGAACCAATCCGGCTCACAAACA < 2:980855/100‑1 ACGCCACCGCGCTGGCTATTTTCGGCTACTGGCTGTGGCAGTTTTTTCTGCGCTATCAGTTTTGTTTGTGTGCCGGATGAACCAATCCGGCTCACAAAC < 1:1170224/99‑1 GCCACCGCGCTGGCTATTTTCGGCTACTGGCTGTGGTAGTTTTTTCTGCGCTATCAGTTTTGTTTGTGTGCCGGATGAACCAATCCGGCTCACAAACAAA < 1:2042291/100‑1 CACCGCGCTGGCTATTTTCGGCTACTGGCTGTGGCAGTTTTTTCTGCGCTATCAGTTTTGTTTGTGTGCCGGATGAACCAATCCGGCTCACAAACAAAAC < 2:2443242/100‑1 ACCGCGCTGGCTATTTTCGGCTACTGGCTGTGGCAGTTTTTTCTGCGCTATCAGTTTTGTTTGTGTGCCGGATGAACCAATCCGGCTCACAAACAAAACT < 1:755462/100‑1 ggtGCTGGCTTTTTTCGGCTACTGGCGGTGGCAGTTTTTTCTGCGCTATCAGTTTTGTTGGTGTGCCGGATGAACCAATCGGGCTCACAAACATAACTG < 1:2942219/96‑1 GCTGGCTATTTTCGGCTACTGGCTGTGGCAGTTTTTTCTGCGCTATCAGTTTTGTTTGTGTGCCGGATGAACCAATCCGGCTCACAAACAAAACTGATAG < 2:869219/100‑1 GTTTGTGTGCCGGATGAACCAATCCGGCTCACAAACAAAACTGATAGCGCAGAAAAAACTGCCACAGCCAGTAGCCGAAAATAGCCAGCGCGGTGGCGTA > 2:451182/1‑100 TTGTGTGCCGGATGAACCAATCCGGCTCACAAACAAAACTGATAGCGCAGAAAAAACTGCCACAGCCAGTAGCCGAAAATAGCCAGCGCGGTGGCGTACA < 1:3001/100‑1 TTGTGTGCCGGATGAACCAATCCGGCTCACAAACAAAACTGATAGCGCAGAAAAAACTGCCACAGCCAGTAGCCGAAAATAGCCAGCGCGGTGGCGTACA < 1:1467769/100‑1 TGTGTGCCGGATGAACCAATCCGGCTTACAAACAAAACTGATAGCGCAGAAAAAACTGACACAGCCAGTAGACGAAAATAGCCAGCGCGGTGGCGTACA > 1:2458487/1‑99 TGTGGCGGATGAACCAATCCGTCTCACAAACAAAACTGATAGCGCAGAAAAAACTGCCACAGCCAGTAGCCGAAAATAGCCAGCGCGGTGGCGTACAT < 2:1641247/98‑1 GTGCCGGATGAACCAATCCGGCTCACAAACAAAACTGATAGCGCAGAAAAAACTGCCACAGCCAGTAGCCGAAAATAGCCAGCGCGGTGGCGTACATAAA < 1:3666632/100‑1 GTGCCGGATGAACCAATCCGGCTCACAAACAAAACTGATAGCGCAGAAAAAACTGCCACAGCCAGTAGCCGAAAATAGCCAGCGCGGTGGCGTACATAAA < 2:1556492/100‑1 GTGCCGGATGAACCAATCCGGCTCACAAACAAAACTGATAGCGCAGAAAAAACTGCCACAGCCAGTAGCCGAAAATAGCCAGCGCGGTGGCGTACATAAA < 1:18810/100‑1 TCGCTTTGTGGCGAAAAAAACGCGGCTGGTTTATGTACGCCACCGCGCTGGCTATTTTCGGCTACTGGCTGTGGCAGTTTTTTCTGCGCTATCAGTTTTGTTTGTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/4385912‑4386017‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtttgtgTGCCGGATGAACCAATCCGGCTCACAAACAAAACTGATAGCGCAGAAAAAACTGCCACAGCCAGTAGCCGAAAATAGCCAGCGCGGTGGCGTACATAAA < NC_000913/4386039‑4385941 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |