| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 1028319 = | NA (NA) | 3 (0.020) | 3/170 | NT | NA | coding (374/414 nt) | yccU | putative CoA‑binding protein |
| ? | NC_000913 | 1028348 = | NA (NA) | coding (403/414 nt) | yccU | putative CoA‑binding protein | |||||
CCGCGTCTGCGTAACTAATCCCTGAACAAATCCCCGGAAGGTTTTTGCCTTCCGGGGATTTTTTATTTGGCCAGGCCCAGGCGAGGGATCTCAATAGCCGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/1028421‑1028319‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggcCTGGCCAAATAAAAAATCCCCGGAAGGCAAAAACCTTCCGGGGATTTGTTCAGGGATTAGTTACGCAGACGCGGGGCCTGGAGTTGTTTGCGGATGGTC > NC_000913/1028348‑1028446 CCGCGTCTGCGTAACTAATCCCTGAACAAATCCCCGGAAGGTTTTTGCCTTCCGGGGATTTTTTATTTGGCCAGGCCCAGGCGAGGGATCTCAATAGCCG < 1:1380076/100‑1CCGCGTCTGCGTAACTAATCCCTGAACAAATCCCCGGAAGGTTTTTGCCTTCCGGGGATTTTTTATTTGGCCAGGCCCAGGCGAGGGATCTCAATAGCCG < 1:873360/100‑1 CGCGTCTGCGTAACTAATCCCTGAACAAATCCCCGGAAGGTTTTTGCCTTCCGGGGATTTTTTATTTGGCCAGGCCCAGGCGAGGGATCTCAATAGCCGG < 1:777627/100‑1 gaGTCTGCGTAACTAATCCCTGAACAAATCCCCGGAAGGTTTTGGCGTTCCGGGGATTTTTTATTTGGCCAGGCCCAGGCGAGGGATCTCAATAGCCGGc < 1:2679006/98‑2 TTTGGCCAGGCCCAGGCGAGGGATCTCAATAGCCGGGCCTGGCCAAATAAAAAATCCCCGGAAGGCCAAAACCTTCCGGGGATTTGTTCAGGGATTA > 1:2449840/1‑97 TGGCCAGGCCCAGGCGAGGGATCTCAATAGCCGGGCCTGGCCAAATAAAAAATCCCCGGAAGGCAAAAACCTTCCGGGGATTTGTTCAGGTATTAGTTAC > 1:1827844/1‑100 CAGGCCCAGGCGAGGGATCTCAATAGCCGGGCCTGGCCAAATAAAAAATCCCCGGAAGGCAAAAACCTTCCGGGGATTTGTTCAGGGATTAGTTACGCAG > 1:2053307/1‑100 GGCCTGGCCAAATAAAAAATCCCCGGAAGGCAAAAACCTTCCGGGGATTTGTTCAGGGATTAGTTACGCAGACGCGGGGCCTGGAGTTGTTTGCGGATGG > 2:2527201/1‑100 GCCTGGCCAAATAAAAAATCAAAGAAAAACAAAAACCTTCCGGGGATTTGTTCAGGGATTAGTTACGCAGACGCGGGGCCTGGAGTTGTTTGCGGAT < 1:1133244/97‑1 CCTGGCCAAATAAAAAATCCCCGGAAGGCAAAAACCTTCCGGGGATTTGTTCAGGGATTAGTTACGCAGACGCGGGGCCTGGAGTTGTTTGCGGATGGTC > 2:1003651/1‑100 CCTGGCCAAATAAAAAATCCCCGGAAGGCAAAAACCTTCCGGGGATTTGTTCAGGGATTAGTTACGCAGACGCGGGGCCTGGAGTTGTTTGCGGATGGTC < 2:2362804/100‑1 CCGCGTCTGCGTAACTAATCCCTGAACAAATCCCCGGAAGGTTTTTGCCTTCCGGGGATTTTTTATTTGGCCAGGCCCAGGCGAGGGATCTCAATAGCCGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/1028421‑1028319‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggcCTGGCCAAATAAAAAATCCCCGGAAGGCAAAAACCTTCCGGGGATTTGTTCAGGGATTAGTTACGCAGACGCGGGGCCTGGAGTTGTTTGCGGATGGTC > NC_000913/1028348‑1028446 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |